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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8577#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 1110 fasta sequence
[CCGATTCTAAATTTTGTGCATTAGTTCTAACTTTTGATAACAGAAACAGTCGTAAACTAACAATGACGACCAAGGTGGCAGCTAAGAAGTTTAAATGGGCGCTAGATTTCAACACCAAACCGCGCAGCAGTGGATCCGACATTGCGGCACCGCCCGGTTACAATCCTTCGGCGGACGTGATTAGCAGCAAGGTGGTCAACCAAACCGACCAGAGCCACCTGATCCTGAAGAAGTCGTGGGAGATTGCACTCGGTCCGATCAAGCAGTTCCCCATGAACCTGGTCATCATGTACATGTCGGGCAATTCTATCAGCATCTTTCCGATAATGATGGTGGTGATGATGTTTATCCGGCCGGTCAAGATGATGCTGTCGACGCATTCCACGTTCAAAGTGATTGAAGGCATTTCCGCCACCGGACAGAAGCTGGTGTTTCTGCTGGGCAACCTTGTTAACATTGGGCTGGCGCTTTACAAGTGCCACAGCATGGGCCTGCTTCCGACGCATGCGTCCGATTGGCTCGCGTTCGTCGAGCCGCAAAGAAGGTTGGAATATTCCGGCGGCGGCATCTCGTTACTCTGAGCCGGCGGCACAACCATCCACGCGACACCCTGGAGTGCATTTTTGTGAAACAACTTTGTATTTATTTTTCACTACCACATAGAGGATGGTGAGAGGGGTTACAATAAAAAGATGTAAAGCATATACAATGAACGGAACCAGGTGAATTTGGTGACAAACAAAAATCTCTTTCGGTTGAATCTGTTGTTTAAAACGAAAAGTTGTCTAGCCTAGGAGTTGAAAGAACTAGCTTAGAGCCATCCTGAGTTTTCACAAAACCGTAGTCCTGTTGGCCGAGTTTCCGAGGCACTGTAGGTTACGGCTTCTTGTACTGATCGGCGAATTCTTTCGCCTTTTCCAACAGCTTT-CCCGGCTCGTCAACCCTCGGTACCTCATAGTTTTGTGTGATGTAGATCCCGGTGTAAACACCGGCTCCGAACGTCAGCAGAAACTTCAGCATGTCTGTTATTCCGAGTGGATCCACTTTGGACTGCTATTTTTAACCCTTGGAGCGCTAGAAAGGAAAACTGCCCGGAGGCTAGAAGGCCGG]
[+] EMBL BM590052 [CCGATTCTAAATTTTGTGCATTAGTTCTAACTTTTGATAACAGAAACAGTCGTAAACTAACAATGACGACCAAGGTGGCAGCTAAGAAGTTTAAATGGGCGCTAGATTTCAACACCAAACCGCGCAGCAGTGGATCCGACATTGCGGCACCGCCCGGTTACAATCCTTCGGCGGACGTGATTAGCAGCAAGGTGGTCAACCAAACCGACCAGAGCCACCTGATCCTGAAGAAGTCGTGGGAGATTGCACTCGGTCCGATCAAGCAGTTCCCCATGAACCTGGTCATCATGTACATGTCGGGCAATTCTATCAGCATCTTTCCGATAATGATGGTGGTGATGATGTTTATCCGGCCGGTCAAGATGATGCTGTCGACGCATTCCACGTTCAAAGTGATTGAAGGCATTTCCGCCACCGGACAGAAGCTGGTGTTTCTGCTGGGCAACCTTGTTAACATTGGGCTGGCGCTTTACAAGTGCCACAGCATGGGCCTGCTTCCGACGCATGCGTCCGATTGGCTCGCGTTCGTCGAGCCGCAAAGAAGGTTGGAATATTCCGGCGGCGGCATCTCGTTACTCTGAGCCGGCGGCACAACCATCCACGCGACACCCTGGAGT ]
[+] EMBL BM644967 [ ccgAAATTTTGTGCATTAGTTCTAACTTTTGATAACAGAAACAGTCGTAAACTAACAATGACGACCAAGGTGGCAGCTAAGAAGTTTAAATGGGCGCTAGATTTCAACACCAAACCGCGCAGCAGTGGATCCGACATTGCGGCACCGCCCGGTTACAATCCTTCGGCGGACGTGATTAGCAGCAAGGTGGTCAACCAAACCGACCAGAGCCACCTGATCCTGAAGAAGTCGTGGGAGATTGCACTCGGTCCGATCAAGCAGTTCCCCATGAACCTGGTCATCATGTACATGTCGGGCAATTCTATCAGCATCTTTCCGATAATGATGGTGGTGATGATGTTTATCCGGCCGGTCAAGATGATGCTGTCGACGCATTCCACGTTCAAAGTGATTGAAGGCATTTCCGCCACCGGACAGAAGCTGGTGTTTCTGCTGGGCAACCTTGTTAACATTGGGCTGGCGCTTTACAAGTGCCACAGCATGGGCCTGCTTCCGACGCATGCGTCCGATTGGCTCGCGTTCGTCGAGCCGCAAAGAAGGTTGGAATATTCCGGCGGCGGCATCTCGTTACTCTGAGCCGGCGGCACAACCATCCACGCGACACCCTGGAGTGCATTTTTGTGAAAC ]
[+] EMBL BX623050 [ TCTAACTTTTNATAACAGAAACAGTCGTAAACTAACAATGACGACCAAGGTGGCAGCTAAGAAGTTTAAATGGGCGCTAGATTTCAACACCAAACCGCGCAGCAGTGGATCCGACATTGCGGCACCGCCCGGTTACAATCCTTCGGCGGACGTGATTAGCAGCAAGGTGGTCAACCAAACCGACCAGAGCCACCTGATCCTGAAGAAGTCGTGGGAGATTGCACTCGGTCCGATCAAGCAGTTCCCCATGAACCTGGTCATCATGTACATGTCGGGCAATTCTATCAGCATCTTTCCGATAATGATGGTGGTGATGATGTTTATCCGGCCGGTCAAGATGATGCTGTCGACGCATTCCACGTTCAAAGTGATTGAAGGCATTTCCGCCACCGGACAGAAGCTGGTGTTTCTGCTGGGCAACCTTGTTAACATTGGGCTGGCGCTTTACAAGTGCCACAGCATGGGCCTGCTTCCGACGCATGCGTCCGATTGGCTCGCGTTCGTCGAGCCGCAAAGAAGGTTGGAATATTCCGGCGGCGGCATCTCGTTACTCTGAGCCGGCGGCACAACCATCCACGCGA ]
[+] EMBL BX615726 [ ACTAACAATGACGACCAAGGTGGCAGCTAAGAAGTTTAAATGGGCGCTAGATTTCAACACCAAACCGCGCAGCAGTGGATCCGACATTGCGGCACCGCCCGGTTACAATCCTTCGGCGGACGTGATTAGCAGCAAGGTGGTCAACCAAACCGACCAGAGCCACCTGATCCTGAAGAAGTCGTGGGAGATTGCACTCGGTCCGATCAAGCAGTTCCCCATGAACCTGGTCATCATGTACATGTCGGGCAATTCTATCAGCATCTTTCCGATAATGATGGTGGTGATGATGTTTATCCGGCCGGTCAAGATGATGCTGTCGACGCATTCCACGTTCAAAGTGATTGAAGGCATTTCCGCCACCGGACAGAAGCTGGTGTTTCTGCTGGGCAACCTTGTTAACATTGGGCTGGCGCTTTACAAGTGCCACAGCATGGGCCTGCTTCCGACGCATGCGTCCGATTGGCTCGCGTTCGTCGAGCCGCAAAGAAGGTTGGAATATTCCGGCGGCGGCATCTCGTTACTCTGAGCCGGCGGCACAACCATCCACGCGACACCCTGGAGTGCATTTTTGTGAAACAACTTTGTATTTATTTTTCACTACCACATAGAGGATGGTGAGAGGGGTTACAATAAAAAGATGTAAAGCATATACAATGAACGGAACCAGGTGAATTT ]
[+] EMBL BX620726 [ AATGACGACCAAGGTGGCANCTAAGAAGTTTAAATGGGCGCTAGATTTCAACACCAAACCGCGCAGCAGTGGATCCGACATTGCAGCACCACCCGGGTACAATCCGTCGGCGGACGTGATTAGCAGCAAGGTGGTCAACCAGACCGACCAGAGCCACCTGATCCTGAAGAAGTCGTGGGAGATTGCACTCGGTCCGATCAAGCAGTTCCCCATGAACCTGGTCATCATGTACATGTCGGGCAATTCTATCAGCATCTTTCCGATCATGATGGTGGTGATGATGTTTATCCGGCCGGTCAAGATGATGCTGTCGACGCATTCCACGTTCAAAGTGATTGAAGGCATTTCCGCCACCGGACAGAAGCTGGTGTTTCTGCTGGGCAACCTTGTTAACATTGGGCTGGCGCTTTACAAGTGCCACAGCATGGGCCTGCTTCCGACGCATGCGTCCGATTGGCTCGCGTTCGTCGAGCCGCAAAGAAGGTTGGAATATTCCGGCGGCGGCATCTCGTTACTCTGAGCCGGCGGCACAACCATCCACGCGACACCCTGGAGTGCATTTTTGTGAAACAACTTTGTATTTATTTTTCACTACCACATAGAGGATGGTGAGAGGGGTaa ]
[-] EMBL BM593539 [ GTGAAACAACTTTGTATTTATTTTTCACTACCACATAGAGGATGGTGAGAGGGGTTACAATAAAAAGACGTAAAGCATATACAATGAACGGAACCAGGTGAATTTGGTGACAAACAAAAATCTCTTTCGGTTGAATCTGTTGTTTAAAACGAAAAGTTGTCTAGCCTAGGAGTTGAAAGAACTAGCTTAGAGCCATCCTGAGTTTTCACAAAACCGTAGTCCTGTTGGCCGAGTTTCCGAGGCACTGTAGGTTACGGCTTCTTGTACTGATCGGCGAATTCTTTCGCCTTTTCCAACAGCTTT CCCGGCTCGTCAACCCTCGGTACCTCATAGTTTTGTGTGATGTAGATCCCGGTGTAAACACCGGCTCCGAACGTCAGCAGAAACTTCAGCATGTCTGTTATTCCGAGTGGATCCACTTTGGACTGCTATTTTTAACCCTTGGAGCGCTAGAAAGGAAAACTGCCCGGAGGCTAGAAGGCCGG]
[-] EMBL BM637715 [ GTGAAACAACTTTGTATTTATTTTTCACTACCACATAGAGGATGGTGAGAGGGGTTACAATAAAAAGACGTAAAGCATATACAATGAACGGAACCAGGTGAATTTGGTGACAAACAAAAATCTCTTTCGGTTGAATCTGTTGTTTAAAACGAAAAGTTGTCTAGCCTAGGAGTTGAAAGAACTAGCTTAGAGCCATCCTGAGTTTTCACAAAACCGTAGTCCTGTTGGCCGAGTTTCCGAGGCACTGTAGGTTACGGCTTCTTGTACTGATCGGCGAATTCTTTCGCCTTTTCCAACAGCTTT CCCGGCTCGTCAACCCTCGGTACCTCATAGTTTTGTGTGATGTAGATCCCGGTGTAAACACCGGCTCCGAACGTCAGCAGAAACTTCAGCATGTCTGTTATTCCGAGTGGATCCACTTTGGACTGCTATTTTTAACCCTTGGAGCGCTAGAAAGGAAcgg ]
[-] EMBL BM579330 [ GTGAAACAACTTTGTATTTATTTTTCACTACCACATAGAGGATGGTGAGAGGGGTTACAATAAAAAGATGTAAAGCATATACAATGAACGGAACCAGGTGAATTTGGTGACAAACAAAAATCTCTTTCGGTTGAATCTGTTGTTTAAAACGAAAAGTTGTCTAGCCTAGGAGTTGAAAGAACTAGCTTAGAGCCATCCTGAGTTTTCACAAAACCGTAGTCCTGTTGGCCGAGTTTCCGAGGCACTGTAGGTTACGGCTTCTTGTACTGATCGGCGAATTCTTTCGCCTTTTCCAACAGCTTT CCCGGCTCGTCAACCCTCGGTACCTCATAGTTTTGTGTGATGTAGATTCCGGTGTAAACACCGGCTCCGAACGTCAGCAGAAACTTCAGCATGTCTGTTATTCCGAGTGGATCCACcgg ]
[-] EMBL BM642514 [ GTGAAACAACTTTGTATTTATTTTTCACTACCACATAGAGGATGGTGAGAGGGGTTACAATAAAAAGATGTAAAGCATATACAATGAACGGAACCAGGTGAATTTGGTGACAAACAAAAATCTCTTTCGGTTGAATCTGTTGTTTAAAACGAAAAGTTGTCTAGCCTAGGAGTTGAAAGAACTAGCTTAGAGCCATCCTGAGTTTTCACAAAACCGTAGTCCTGTTGGCCGAGTTTCCGAGGCACTGTAGGTTACGGCTTCTTGTACTGATCGGCGAATTCTTTCGCCTTTTCCAACAGCTTT CCCGGCTCGTCAACCCTCGGTACCTCATAGTTTTGTGTGATGTAGATTCCGGTGTAAACACCGGCTCCGAACGTCAGCAGAAACTTCAGCATGTCcgg ]
[-] EMBL BX625369 [ ATTTATTTTTCACTACCACATAGAGGATGGTGAGAGGGGTAACAATAAAAAGACGTAAAGCATATACAATGAACGAAACCAGGTGAATTTGGTGACAAACAAAAATNTNTTTCGGTTGAATCTGTTGTTTAAAACGAAAAGTTGTCTAGCCTAGGAGTNGAAAGAACTAGCTTAGAGCCATCTTGAGTTTTCACAAAACCGTAGTCCTGTTGGCCGAGTTTCCGAGGCACTGTAGGTTACGGCTTCTTGTACTGATCGGCGAATTCTTTCGCCTTTTCCAACAGCTTTNCCCGGCTCGTCAACCCTCGGTACCTCATAGTTTTGTGTGATGTAGATCCCGGTGTAAACACCGGCTCCGA ]
consensusID : consensus_8577#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 462 fasta sequence
[GGCACATTTGGCCTTTTTTTTTTTTTTTTTTTTTTTTTTTGTGAAACAACTTTGTATTTATTTTTCACTACCACATAGAGGATGGTGAGAGGGGTTACAATAAAAAGACGTAAAGCATATACAATGAACGGAACCAGGTGAATTTGGTGACAAACAAAAATCTCTTTCGGTTGAATCTGTTGTTTAAAACGAAAAGTTGTCTAGCCTAGGAGTTGAAAGAACTAGCTTAGAGCCATCCTGAGTTTTCACAAAACCGTAGTCCTGTTGGCCGAGTTTCCGAGGCAATGTAGGTTACGGCTTCTTGTACTGATCGGCGAATTTCTTTCGCCTTTTCCAACAGCTTTCCCGGCTCGTCAACCCTCGGTACCTCATAGTTTTGTGTGATGTAGATCCCCGGTGTAAACACCGGCTCCGAACGTCAGCAGAAACTTCAGCATGTCTGTTATTCCGAGTGGATCCACT]
[-] EMBL CNS08NTJ [GGCACATTTGGCCTTTTTTTTTTTTTTTTTTTTTTTTTTTGTGAAACAACTTTGTATTTATTTTTCACTACCACATAGAGGATGGTGAGAGGGGTTACAATAAAAAGACGTAAAGCATATACAATGAACGGAACCAGGTGAATTTGGTGACAAACAAAAATCTCTTTCGGTTGAATCTGTTGTTTAAAACGAAAAGTTGTCTAGCCTAGGAGTTGAAAGAACTAGCTTAGAGCCATCCTGAGTTTTCACAAAACCGTAGTCCTGTTGGCCGAGTTTCCGAGGCAATGTAGGTTACGGCTTCTTGTACTGATCGGCGAATTTCTTTCGCCTTTTCCAACAGCTTTCCCGGCTCGTCAACCCTCGGTACCTCATAGTTTTGTGTGATGTAGATCCCCGGTGTAAACACCGGCTCCGAACGTCAGCAGAAACTTCAGCATGTCTGTTATTCCGAGTGGATCCACT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_8577#0 CCGATTCTAAATTTTGTGCATTAGTTCTAACTTTTGATAACAGAAACAGTCGTAAACTAA 60
consensus_8577#1 ------------------------------------------------------------
consensus_8577#0 CAATGACGACCAAGGTGGCAGCTAAGAAGTTTAAATGGGCGCTAGATTTCAACACCAAAC 120
consensus_8577#1 ------------------------------------------------------------
consensus_8577#0 CGCGCAGCAGTGGATCCGACATTGCGGCACCGCCCGGTTACAATCCTTCGGCGGACGTGA 180
consensus_8577#1 ------------------------------------------------------------
consensus_8577#0 TTAGCAGCAAGGTGGTCAACCAAACCGACCAGAGCCACCTGATCCTGAAGAAGTCGTGGG 240
consensus_8577#1 ------------------------------------------------------------
consensus_8577#0 AGATTGCACTCGGTCCGATCAAGCAGTTCCCCATGAACCTGGTCATCATGTACATGTCGG 300
consensus_8577#1 ------------------------------------------------------------
consensus_8577#0 GCAATTCTATCAGCATCTTTCCGATAATGATGGTGGTGATGATGTTTATCCGGCCGGTCA 360
consensus_8577#1 ------------------------------------------------------------
consensus_8577#0 AGATGATGCTGTCGACGCATTCCACGTTCAAAGTGATTGAAGGCATTTCCGCCACCGGAC 420
consensus_8577#1 ------------------------------------------------------------
consensus_8577#0 AGAAGCTGGTGTTTCTGCTGGGCAACCTTGTTAACATTGGGCTGGCGCTTTACAAGTGCC 480
consensus_8577#1 ------------------------------------------------------------
consensus_8577#0 ACAGCATGGGCCTGCTTCCGACGCATGCGTCCGATTGGCTCGCGTTCGTCGAGCCGCAAA 540
consensus_8577#1 ------------------------------------------------------------
consensus_8577#0 GAAGGTTGGAATATTCCGGCGGCGGCATCTCGTTACTCTGAGCCGGCGGCACAACCATCC 600
consensus_8577#1 -----------------------------------------------GGCACATTTGGCC 13
****** **
consensus_8577#0 ACGCGACACCCTGGAGTGCATTTTT--GTGAAACAACTTTGTATTTATTTTTCACTACCA 658
consensus_8577#1 TTTTTTTTTTTTTTTTTTTTTTTTTTTGTGAAACAACTTTGTATTTATTTTTCACTACCA 73
* * ***** *********************************
consensus_8577#0 CATAGAGGATGGTGAGAGGGGTTACAATAAAAAGATGTAAAGCATATACAATGAACGGAA 718
consensus_8577#1 CATAGAGGATGGTGAGAGGGGTTACAATAAAAAGACGTAAAGCATATACAATGAACGGAA 133
*********************************** ************************
consensus_8577#0 CCAGGTGAATTTGGTGACAAACAAAAATCTCTTTCGGTTGAATCTGTTGTTTAAAACGAA 778
consensus_8577#1 CCAGGTGAATTTGGTGACAAACAAAAATCTCTTTCGGTTGAATCTGTTGTTTAAAACGAA 193
************************************************************
consensus_8577#0 AAGTTGTCTAGCCTAGGAGTTGAAAGAACTAGCTTAGAGCCATCCTGAGTTTTCACAAAA 838
consensus_8577#1 AAGTTGTCTAGCCTAGGAGTTGAAAGAACTAGCTTAGAGCCATCCTGAGTTTTCACAAAA 253
************************************************************
consensus_8577#0 CCGTAGTCCTGTTGGCCGAGTTTCCGAGGCACTGTAGGTTACGGCTTCTTGTACTGATCG 898
consensus_8577#1 CCGTAGTCCTGTTGGCCGAGTTTCCGAGGCAATGTAGGTTACGGCTTCTTGTACTGATCG 313
******************************* ****************************
consensus_8577#0 GCGAATT-CTTTCGCCTTTTCCAACAGCTTTCCCGGCTCGTCAACCCTCGGTACCTCATA 957
consensus_8577#1 GCGAATTTCTTTCGCCTTTTCCAACAGCTTTCCCGGCTCGTCAACCCTCGGTACCTCATA 373
******* ****************************************************
consensus_8577#0 GTTTTGTGTGATGTAGATCCC-GGTGTAAACACCGGCTCCGAACGTCAGCAGAAACTTCA 1016
consensus_8577#1 GTTTTGTGTGATGTAGATCCCCGGTGTAAACACCGGCTCCGAACGTCAGCAGAAACTTCA 433
********************* **************************************
consensus_8577#0 GCATGTCTGTTATTCCGAGTGGATCCACTTTGGACTGCTATTTTTAACCCTTGGAGCGCT 1076
consensus_8577#1 GCATGTCTGTTATTCCGAGTGGATCCACT------------------------------- 462
*****************************
consensus_8577#0 AGAAAGGAAAACTGCCCGGAGGCTAGAAGGCCGG 1110
consensus_8577#1 ----------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||