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Anopheles gambiae
cluster # 8579 cluster # 8579       Sequences # 11       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8579#0 length = 998 sequences # 1  
consensus_8579#1 length = 832 sequences # 7  
consensus_8579#2 length = 791 sequences # 3  

consensusID : consensus_8579#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 998
fasta sequence
                              [CGCCCAGGTTTATGTTGTGAGAAAAGTTGGGCAGCAGGTTTTGTTACTTCCGTCTCGTAGATTTCTGCAATCCCGGCACAACGAACGCCAAAATGATTGGCCTAAGTGACGGTGTGCCAGCTAGCCCGCGTCGTGTCCGTTCACTGCGCCCCATCTACTGACCTGGCTGTCTGTGCTGTGCAGTGCTGTGAATGCCTGCGGCTGCGTCTGTGCCNGGAGNGATCATCGTGCNAAGCTCACGATACCGGTGCCGGAGGTGAACTGGACAAAGACCTGGCTGATCCTGAAGNCTCGCTGGGCATCGTCGACAGNNATTCGCCACAGGCTTGTGAACCCTTGNTTGGGAGGTTGTNCNGCACGCCTTGCAGATTGCGCCTTGCTTAGCAAAGACNGCCAAAGCNTTGNAACCTTGGAGCCCGGAAAAANCTGGCCCATTGATTGCCCTGGGCGGGTATACGAGGTTGGCAGGTATTCAGGCCAGAGAAGGCTGGTGTCCCCATAGGGCGAACNCCCAGCGACGAGGAGGCACGGAGCCGAGGCACAGACATGATGGNCTGCAGCCTGNAATCGCTGANTGNTGAAATNGCACCAGCGGCCCCCCGGCAAAAAAGAGGTTGAGGTTGGAACAGAGCAACCGAACCACGCTATCCAACAACGAGGTTGGAANATGGCCATTAGAGGTTCTAAAATGNGTTTATTTCCTGGTGAACCNCTGTGNANGGCCAATANAANGCCCCTAAGAGGCACAAGAATGNTTCTTGGGGGNAACNCACCCTTCGGAGCAATTTCCCACAAACGGGGCCAAGGAGGTTGAACTAACNGCAAAAACCCATAGGCACTACCGCACACNTCGGAGAGGAGCCATTAGGTGAAAATCANTCTGTGAGTTAGNCGACAANGACGCCNCGGTCAANAAANGCAACAAGGTTATTACTANTTTCCCTCACACGTGCAAGATTTTGCATTCGTGCTCTGCTAAGACCNCGGCGTGCNCCAGN]

[+] EMBL AL697493             [CGCCCAGGTTTATGTTGTGAGAAAAGTTGGGCAGCAGGTTTTGTTACTTCCGTCTCGTAGATTTCTGCAATCCCGGCACAACGAACGCCAAAATGATTGGCCTAAGTGACGGTGTGCCAGCTAGCCCGCGTCGTGTCCGTTCACTGCGCCCCATCTACTGACCTGGCTGTCTGTGCTGTGCAGTGCTGTGAATGCCTGCGGCTGCGTCTGTGCCNGGAGNGATCATCGTGCNAAGCTCACGATACCGGTGCCGGAGGTGAACTGGACAAAGACCTGGCTGATCCTGAAGNCTCGCTGGGCATCGTCGACAGNNATTCGCCACAGGCTTGTGAACCCTTGNTTGGGAGGTTGTNCNGCACGCCTTGCAGATTGCGCCTTGCTTAGCAAAGACNGCCAAAGCNTTGNAACCTTGGAGCCCGGAAAAANCTGGCCCATTGATTGCCCTGGGCGGGTATACGAGGTTGGCAGGTATTCAGGCCAGAGAAGGCTGGTGTCCCCATAGGGCGAACNCCCAGCGACGAGGAGGCACGGAGCCGAGGCACAGACATGATGGNCTGCAGCCTGNAATCGCTGANTGNTGAAATNGCACCAGCGGCCCCCCGGCAAAAAAGAGGTTGAGGTTGGAACAGAGCAACCGAACCACGCTATCCAACAACGAGGTTGGAANATGGCCATTAGAGGTTCTAAAATGNGTTTATTTCCTGGTGAACCNCTGTGNANGGCCAATANAANGCCCCTAAGAGGCACAAGAATGNTTCTTGGGGGNAACNCACCCTTCGGAGCAATTTCCCACAAACGGGGCCAAGGAGGTTGAACTAACNGCAAAAACCCATAGGCACTACCGCACACNTCGGAGAGGAGCCATTAGGTGAAAATCANTCTGTGAGTTAGNCGACAANGACGCCNCGGTCAANAAANGCAACAAGGTTATTACTANTTTCCCTCACACGTGCAAGATTTTGCATTCGTGCTCTGCTAAGACCNCGGCGTGCNCCAGN]


>consensus_8579#0 CGCCCAGGTTTATGTTGTGAGAAAAGTTGGGCAGCAGGTTTTGTTACTTCCGTCTCGTAG ATTTCTGCAATCCCGGCACAACGAACGCCAAAATGATTGGCCTAAGTGACGGTGTGCCAG CTAGCCCGCGTCGTGTCCGTTCACTGCGCCCCATCTACTGACCTGGCTGTCTGTGCTGTG CAGTGCTGTGAATGCCTGCGGCTGCGTCTGTGCCNGGAGNGATCATCGTGCNAAGCTCAC GATACCGGTGCCGGAGGTGAACTGGACAAAGACCTGGCTGATCCTGAAGNCTCGCTGGGC ATCGTCGACAGNNATTCGCCACAGGCTTGTGAACCCTTGNTTGGGAGGTTGTNCNGCACG CCTTGCAGATTGCGCCTTGCTTAGCAAAGACNGCCAAAGCNTTGNAACCTTGGAGCCCGG AAAAANCTGGCCCATTGATTGCCCTGGGCGGGTATACGAGGTTGGCAGGTATTCAGGCCA GAGAAGGCTGGTGTCCCCATAGGGCGAACNCCCAGCGACGAGGAGGCACGGAGCCGAGGC ACAGACATGATGGNCTGCAGCCTGNAATCGCTGANTGNTGAAATNGCACCAGCGGCCCCC CGGCAAAAAAGAGGTTGAGGTTGGAACAGAGCAACCGAACCACGCTATCCAACAACGAGG TTGGAANATGGCCATTAGAGGTTCTAAAATGNGTTTATTTCCTGGTGAACCNCTGTGNAN GGCCAATANAANGCCCCTAAGAGGCACAAGAATGNTTCTTGGGGGNAACNCACCCTTCGG AGCAATTTCCCACAAACGGGGCCAAGGAGGTTGAACTAACNGCAAAAACCCATAGGCACT ACCGCACACNTCGGAGAGGAGCCATTAGGTGAAAATCANTCTGTGAGTTAGNCGACAANG ACGCCNCGGTCAANAAANGCAACAAGGTTATTACTANTTTCCCTCACACGTGCAAGATTT TGCATTCGTGCTCTGCTAAGACCNCGGCGTGCNCCAGN



consensusID : consensus_8579#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 832
fasta sequence
                              [CAGAATCGCGCACCGGAAAAATTGGGCAAGCAAGGTTTTGTTACTTTCCGTCTCGCAGATTTCACAATCCCGCCACAACCGAACGCCAAAATGATTGCCCTAAGGACGGTGTGCCAGCTAGCCCGCGTCGGTCCGTTCACGCGCCCCATCACGACCGGCGTCGTGCGGCAGGCGGAAGCCGCGGCTGCGTCGGCCGGAGGATCATCGGCAAAGCTCACGATACCGGTGCCGGAGGGAACGGACAAGCCGGCCGATCCGAAGCTCGCGGCCATCGTCGACAGCATCGCCACGCTGAACCTGCTGGAGGTGTCCGAGCTGAGTGCGCTGCTGAAGCGCAAGCTGAACCTG-CCCGACACTGCCATGATGCCGGCC-GGGTTCGGTGCGTTCGCGGGC-GGCCCGGCACC-GGGGGCGGCGGCAGCGGCCGACGAGGAGGAAGCCGCCCCGAAGGTGGTGAAGACGACGTTCAAGGTGAAGCTGGTCAAGTTCGACGAGAAGCAGAAGGTGGCCCTGATCAAGGAGGTGAAGAACCTGCTCGAGGGCATGAATCTGGTGCAGGCGAAGAAGTTCGTCGAGAGTGCGCCGACCGTCGTGAAGGAGGACATACCGAAGGAGGAGGCGGAAAAGCTAAAGGAAGCGTTCACGAAGGTGGGAGCGGTAATCGAGATTGAGTA-GTGGAGGGGAAGGGGGCAACAATC-GCGC-TTTATTTAAGCCATTTTAAGCTGTTTAAGTTGAAGTAAGGATTTAATTAAAACGAAACACCAATTCTACCCAAAAGAAATATACACAACANAAAAAANAAANTCTANAAAAAACCAGGGCCACTTTTTACGGC]

[+] EMBL BX467378             [CAGAATCGCGCACGAGGAAAATTGGGCAAGCAAGGTTTTGTTACTTTCCGTCTCGCAGATTTCACAATCCCGCCACAACCGAACGCCAAAATGATTGCCCTAAGGACGGTGTGCCAGCTAGCCCGCGTCGGTCCGTTCACGCGCCCCATCACGACCGGCGTCGTGCGGCAGGCGGAAGCCGCGGCTGCGTCGGCCGGAGGATCATCGGCAAAGCTCACGATACCGGTGCCGGAGGGAACGGACAAGCCGGCCGATCCGAAGCTCGCGGCCATCGTCGACAGCATCGCCACGCTGAACCTGCTGGAGGTGTCCGAGCTGAGTGCGCTGCTGAAGCGCAAGCTGAACCTG CCCGACACTGCCATGATGCCGGCC GGGTTCGGTGCGTTCGCGGGC GGCCCGGCACC GGGGGCGGCGGCAGCGGCCGACGAGGAGGAAGCCGCCCCGAAGGTGGTGAAGACGACGTTCAAGGTGAAGCTGGTCAAGTTCGACGAGAAGCAGAAGGTGGCCCTGATCAAGGAGGTGAAGAACCTGCTCGAGGGCATGAATCTGGTGCAGGCGAAGAAGTTCGTCGAGAGTGCGCCGACCGTCGTGAAGGAGGACATACCGAAGGAGGAGGCGGAAAAGCTAAAGGAAGCGTTCACGAAGGTGGGAGCGGTAATCGAGATTGAGTAGGTGGAGGGGAAGGGGGCAACAATCGGCGC TTTATTTAAGCCATTTTAAGCTGTTTAAGTTGAAGTAAGGATTTAATTAAAACGAAACACCAATTCTACCCAAAAGAAATATACACAACANAAAAAANAAANTCTANAAAAAACCAGGGCCACTTTTTACGGC]
[+] EMBL BM650399             [            CCGGAAAAATTGGGCAAGCAAGGTTTTGTTACTTTCCGTCTCGCAGATTTCACAATCCCGCCACAACCGAACGCCAAAATGATTGCCCTAAGGACGGTGTGCCAGCTAGCCCGCGTCGGTCCGTTCACGCGCCCCATCACGACCGGCGTCGTGCGGCAGGCGGAAGCCGCGGCTGCGTCGGCCGGAGGATCATCGGCAAAGCTCACGATACCGGTGCCGGAGGGAACGGACAAGCCGGCCGATCCGAAGCTCGCGGCCATCGTCGACAGCATCGCCACGCTGAACCTGCTGGAGGTGTCCGAGCTGAGTGCGCTGCTGAAGCGCAAGCTGAACCTG CCCGACACTGCCATGATGCCGGCC GGGTTCGGTGCGTTCGCGGGC GGCCCGGCACC GGGGGCGGCGGCAGCGGCCGACGAGGAGGAAGCCGCCCCGAAGGTGGTGAAGACGACGTTCAAGGTGAAGCTGGTCAAGTTCGACGAGAAGCAGAAGGTGGCCCTGATCAAGGAGGTGAAGAACCTGCTCGAGGGCATGAATCTGGTGCAGGCGAAGAAGTTCGTCGAGAGTGCGCCGACCGTCGTGAAGGAGGACATACCGAAGGAGGAGGCGGAAAAGC                                                                                                                                                                                                                  ]
[+] EMBL BM643528             [            CCGGAAAAATTGGGCAAGCAAGGTTTTGTTACTTTCCGTCTCGCAGATTTCACAATCCCGCCACAACCGAACGCCAAAATGATTGCCCTAAGGACGGTGTGCCAGCTAGCCCGCGTCGGTCCGTTCACGCGCCCCATCACGACCGGCGTCGTGCGGCAGGCGGAAGCCGCGGCTGCGTCGGCCGGAGGATCATCGGCAAAGCTCACGATACCGGTGCCGGAGGGAACGGACAAGCCGGCCGATCCGAAGCTCGCGGCCATCGTCGACAGCATCGCCACGCTGAACCTGCTGGAGGTGTCCGAGCTGAGTGCGCTGCTGAAGCGCAAGCTGAACCTG CCCGACACTGCCATGATGCCGGCC GGGTTCGGTGCGTTCGCGGGC GGCCCGGCACC GGGGGCGGCGGCAGCGGCCGACGAGGAGGAAGCCGCCCCGAAGGTGGTGAAGACGACGTTCAAGGTGAAGCTGGTCAAGTTCGACGAGAAGCAGAAGGTGGCCCTGATCAAGGAGGTGAAGAACCTGCTCGAGGGCATGAATCTGGTGCAGGCGAAGAAGTTCGTCGAGAGTGCGCCGACCGTCGTGAAGGAGGACATACCGAAGGAGGAGGCGGAAAAGCTAAAGGAAGCGTTCACGAAGGTGGGAGCGGTAATCGAGATTGAGTA GTGGGAGGGAAGGGGGCAACAATC GCGC TTTta                                                                                                                                ]
[+] EMBL BM652911             [                          ccgGCAAGGTTTTGTTACTTTCCGTCTCGCAGATTTCACAATCCCGCCACAACCGAACGCCAAAATGATTGCCCTAAGGACGGTGTGCCAGCTAGCCCGCGTCGGTCCGTTCACGCGCCCCATCACGACCGGCGTCGTGCGGCAGGCGGAAGCCGCGGCTGCGTCGGCCGGAGGATCATCGGCAAAGCTCACGATACCGGTGCCGGAGGGAACGGACAAGCCGGCCGATCCGAAGCTCGCGGCCATCGTCGACAGCATCGCCACGCTGAACCTGCTGGAGGTGTCCGAGCTGAGTGCGCTGCTGAAGCGCAAGCTGAACCTG CCCGACACTGCCATGATGCCGGCC GGGTTCGGTGCGTTCGCGGGC GGCCCGGCACC GGGGGCGGCGGCAGCGGCCGACGAGGAGGAAGCCGCCCCGAAGGTGGTGAAGACGACGTTCAAGGTGAAGCTGGTCAAGTTCGACGAGAAGCAGAAGGTGGCCCTGATCAAGGAGGTGAAGAACCTGCTCGAGGGCATGAATCTGGTGCAGGCGAAGAAGTTCGTCGAGAGTGCGCCGACCGTCGTGAAGGAGGACATACCGAAGGAGGAGGCGGAAAAGCTAAAGGAAGCGTTCACGAAGGTGGGAGCGGTAATCGAGATTGAGTA GTGGA GGGAAGGGGGCAACAATC GCGCTTTTATTT AG CA TTTAAGCTGTTT AGTT                                                                                                      ]
[+] EMBL BX614083             [                                AGGTTTTGTTACTTTCCGTCTCGCAGATTTCACAATCCCGCCACAACCTAACGCCAAAATGATTGCCCTAAGGACGGTGTGCCAGCTAGCCCGCGTCGGTCCGTTAACGCGCCCCATCACGACCGGCGTCGTGCGGCAGGCGGAAGCCGCGGCTGCGTCGGCCGGAGGATCATCGGCAAAGCTCACGATACCGGTGCCGGAGGGAACGGACAAGCCGGCCGATCCGAAGCTCGCGGCCATCGTCGACAGCATCGCCACGCTGAACCTGCTGGAGGTGTCCGAGCTGAGTGCGCTGCTGAAGCGCAAGCTGAAACTGCCCCGACACCGCCATGATGCCGGCCGGGGTTCGGTGCGTTCGCGGGCGGGCCCGGCACCGGGGGGCGGCGGCAGCG                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL BX614084             [                                         TACTTTCCGTCTCGCAGATTTCACAATCCCGCCACAACCTAACGCCAAAATGATTGCCCTAAGGACGGTGTGCCAGCTAGCCCGCGTCGGTCCGTTCACGCGCCCCATCACGACCGGCGTCGTGCGGCAGGCGGAAGCCGCGGCTGCGTCGGCCGGAGGATCATCGGCAAAGCTCACGATACCGGTGCCGGAGGGAACGGACAAGCCGGCCGATCCGAAGCTCGCGGCCATCGTCGACAGCATCGCCACGCTGAACCTGCTGGAGGTGTCCGAGCTGAGTGCGCTGCTGAAGCGCAAGCTGAACCTG CCCGACACCGCCATGATGCCGGCC GGGTTCGGTGCGTTCGCGGGC GGCCCGGCACC G                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL BX614082             [                                                                                                 CCCTAAGGACGGTGTGCCAGCTAGCCCGCGTCGGTCCGTTCACGCGCCCCATCACGACCGGCGTCGTGCGGCAGGCGGAAGCCGCGGCTGCGTCGGCCGGAGGATCATCGGCAAAGCTCACGATACCGGTGCCGGAGGGAACGGACAAGCCGGCCGATCCGAAGCTCGCGGCCATCGTCGACAGCATCGCCACGCTGAACCTGCTGGAGGTGTCCGAGCTGAGTGCGCTGCTGAAGCGCAAGCTGAACCTG CCCGACACCGCCATGATGCCGGCC GGGTTCGGTGCGTTCGCGGGC GGCCCGGCACC GGGGGCGGCGGCAGCGGCCGACGAGGAGGAAGCCGCCCCGAAGGTGGTGAAGACGACGTTCAAGGTGAAGCTGGTCAAGTTCGACGAGAAGCAGAAGGTGGCCCTGATCAAGGAGGTGAAGAACCTTCTCGAGGGCATGAATCTGGTGCAGGCGAAGAAGTTCGTCGAGAGTGCGCCGACCGTCGTGAAGGAGGACATACCGAAGGAGGAGGCGGAAAAGCTAAAGGA                                                                                                                                                                                                           ]


>consensus_8579#1 CAGAATCGCGCACCGGAAAAATTGGGCAAGCAAGGTTTTGTTACTTTCCGTCTCGCAGAT TTCACAATCCCGCCACAACCGAACGCCAAAATGATTGCCCTAAGGACGGTGTGCCAGCTA GCCCGCGTCGGTCCGTTCACGCGCCCCATCACGACCGGCGTCGTGCGGCAGGCGGAAGCC GCGGCTGCGTCGGCCGGAGGATCATCGGCAAAGCTCACGATACCGGTGCCGGAGGGAACG GACAAGCCGGCCGATCCGAAGCTCGCGGCCATCGTCGACAGCATCGCCACGCTGAACCTG CTGGAGGTGTCCGAGCTGAGTGCGCTGCTGAAGCGCAAGCTGAACCTGCCCGACACTGCC ATGATGCCGGCCGGGTTCGGTGCGTTCGCGGGCGGCCCGGCACCGGGGGCGGCGGCAGCG GCCGACGAGGAGGAAGCCGCCCCGAAGGTGGTGAAGACGACGTTCAAGGTGAAGCTGGTC AAGTTCGACGAGAAGCAGAAGGTGGCCCTGATCAAGGAGGTGAAGAACCTGCTCGAGGGC ATGAATCTGGTGCAGGCGAAGAAGTTCGTCGAGAGTGCGCCGACCGTCGTGAAGGAGGAC ATACCGAAGGAGGAGGCGGAAAAGCTAAAGGAAGCGTTCACGAAGGTGGGAGCGGTAATC GAGATTGAGTAGTGGAGGGGAAGGGGGCAACAATCGCGCTTTATTTAAGCCATTTTAAGC TGTTTAAGTTGAAGTAAGGATTTAATTAAAACGAAACACCAATTCTACCCAAAAGAAATA TACACAACANAAAAAANAAANTCTANAAAAAACCAGGGCCACTTTTTACGGC



consensusID : consensus_8579#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 791
fasta sequence
                              [CGAGGTGCGCATGCTGTGTGGTGAGAAAAG-TGGGCAAGCAAGGTTTTGTTACTTTCCGTCTCGTAGATTTCGCAATCCCGCCACAACCGAACGCCAAAATGATTGCCCTAAGGACGGTGTGCCAGCTAGCCCGCGTCGGTCCGTTCACGCGCCCCATCACGACCGGCGTCGTGCGGCAGGCGGAAGCCGCGGCTGCGTCGGCCGGAGGATCATCGGCAAAGCTCACGATACCGGTGCCGGAGGGAACGGACAAGCCGGCCGATCCGAAGCTCGCGGCCATCGTCGACAGCATCGCCACGCTGAACCTGCTGGAGGTGTCCGAGCTGAGTGCGCTGCTGAAGCGCAAGCTG-AACCTGCCCGACACCGCCATGATGCCGGCCGGGTTCGGTGCGTTCGCGGGCGGTCCGGCACCGGGGGCGGCGGCAGCGGCCGACGAGGAGGAAGCCGCCCCGAAGGTGGTGAAGACGACGTTCAAGGTGAAGCTGGTCAAGTTCGACGAGACGCAGAAGGTGGCCCTGACCAAGGAGGTGAAGAACCTGCTCGAGGGCATGAATCTGGTGCAGGCGAAGAAGTTCGTCGAGAGTTCGCCGACCGTCGTGAAGGAGGACATACCGAAGACGGAGGCGGAAAAGCTAAAGGAAGCGTTCACGAAGGTGGGAGCGGTAATCGAGATTGAGTAGTGGAGGGAAGGGGGCAACAATCGCGCTTTTATTTAGCATTTAAGCTGTTTAGTTGAAGTAGGATTAAATAAACGAACACAATCCACCTACGGAAAAAAAAAAAAAAAAAAA]

[+] EMBL AL933613             [CGAGGTGCGCATGCTGTGTGGTGAGAAAAG TGGGCAAGCAAGGTTTTGTTACTTTCCGTCTCGTAGATTTCGCAATCCCGCCACAACCGAACGCCAAAATGATTGCCCTAAGGACGGTGTGCCAGCTAGCCCGCGTCGGTCCGTTCACGCGCCCCATCACGACCGGCGTCGTGCGGCAGGCGGAAGCCGCGGCTGCGTCGGCCGGAGGATCATCGGCAAAGCTCACGATACCGGTGCCGGAGGGAACGGACAAGCCGGCCGATCCGAAGCTCGCGGCCATCGTCGACAGCATCGCCACGCTGAACCTGCTGGAGGTGTCCGAGCTGAGTGCGCTGCTGAAGCGCAAGCTG AACCTGCCCGACACCGCCATGATGCCGGCCGGGTTCGGTGCGTTCGCGGGCGGTCCGGCACCGGGGGCGGCGGCAGCGGCCGACGAGGAGGAAGCCGCCCCGAAGGTGGTGAAGACGACGTTCAA                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CNS08U65             [   ttgcCGCATGCTGTGTGGTGAGAAAAGTTGGGCAAGCAAGGTTTTGTTACTTTCCGTCTCGTAGATTTCGCAATCCCGCCACAACCGAACGCCAAAATGATTGCCCTAAGGACGGTGTGCCAGCTAGCCCGCGTCGGTCCGTTCACGCGCCCCATCACGACCGGCGTCGTGCGGCAGGCGGAAG CGCGGCTGCGTCGGCCGGAGGATCATCGGCAAAGCTCACGATACCGGTGCCGGAGGGAACGGACAAGCCGGCCGATCCGAAGCTCGCGGCCATCGTCGACAGCATCGCCACGCTGAACCTGCTGGAGGTGTCCGAGCTGAGTGCGCTGCTGAAGCGCAAGCTGAAACCTGCCCGACACCGCCATGATGCCGGCCGGGTTCGGTGCGTTCGCGGGCGGTCCGGCACCGGGGGCGGCGGCAGCGGCCGACGAGGAGGAAGCCGCCCCGAA GTGGTGAAGACGACGTTCAAGGTGAAGCTGGTCAAGTTCGACGAGACGCAGAAGGTGGCCCTGACCAAGGAGGTGAAGAACCTGCTCGAGGGCATGAATCTGGTGCAGGCGAAGAAGTTCGTCGAGAGTTCGCCGACCGTCGTGAAGGAGGACATACCGAAGACGGAGGCGGAAAAGCTAAAGGAAGCGTTCACGAAGGTGGGAGCGGTAATCGAGATTGAGTAGTGGAGGGAAGGGGGCAACAATCGCGCTTTTATTTAGCATTTAAGCTGTTTAGTTGAAGTAGGATTAAATAAACGAACACAATCCACCTACGGAAAAAAAAAAAAAAAAAAA]
[-] EMBL CNS08U66             [                                                                                                                                                                                                                                                                                                                                                                                                                                                 GACGAGGAGGAAGCCCCCCCGAAGGTGGTGAAAACGACGTTCAAGGTGAAGCTGGTCAAGTTCGACGAGAAGCAGAAGGTGGCCCTGACCAAGGAGGTGAAGAACCTGCTCGAGGGCATTAATTTGGTGCAGGCGAAGA                                                                                                                                                                                                                             ]


>consensus_8579#2 CGAGGTGCGCATGCTGTGTGGTGAGAAAAGTGGGCAAGCAAGGTTTTGTTACTTTCCGTC TCGTAGATTTCGCAATCCCGCCACAACCGAACGCCAAAATGATTGCCCTAAGGACGGTGT GCCAGCTAGCCCGCGTCGGTCCGTTCACGCGCCCCATCACGACCGGCGTCGTGCGGCAGG CGGAAGCCGCGGCTGCGTCGGCCGGAGGATCATCGGCAAAGCTCACGATACCGGTGCCGG AGGGAACGGACAAGCCGGCCGATCCGAAGCTCGCGGCCATCGTCGACAGCATCGCCACGC TGAACCTGCTGGAGGTGTCCGAGCTGAGTGCGCTGCTGAAGCGCAAGCTGAACCTGCCCG ACACCGCCATGATGCCGGCCGGGTTCGGTGCGTTCGCGGGCGGTCCGGCACCGGGGGCGG CGGCAGCGGCCGACGAGGAGGAAGCCGCCCCGAAGGTGGTGAAGACGACGTTCAAGGTGA AGCTGGTCAAGTTCGACGAGACGCAGAAGGTGGCCCTGACCAAGGAGGTGAAGAACCTGC TCGAGGGCATGAATCTGGTGCAGGCGAAGAAGTTCGTCGAGAGTTCGCCGACCGTCGTGA AGGAGGACATACCGAAGACGGAGGCGGAAAAGCTAAAGGAAGCGTTCACGAAGGTGGGAG CGGTAATCGAGATTGAGTAGTGGAGGGAAGGGGGCAACAATCGCGCTTTTATTTAGCATT TAAGCTGTTTAGTTGAAGTAGGATTAAATAAACGAACACAATCCACCTACGGAAAAAAAA AAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8579#1      -------CAGA-ATCGCGCACCGGAAAAATTGGGCAAGCAAGGTTTTGTTACTTTCCGTC 52
consensus_8579#2      CGAGGTGCGCATGCTGTGTGGTGAGAAAAGTGGGCAAGCAAGGTTTTGTTACTTTCCGTC 60
consensus_8579#0      ---CGCCCAGG-TTTATGTTGTGAGAAAAGTTGGGCAGCA-GGTTTTGTTACTT-CCGTC 54
                             *         *    *  **** * **  **** ************* *****

consensus_8579#1      TCGCAGATTTC-ACAATCCCGCCACAACCGAACGCCAAAATGATTGCCCTAAG-GACGGT 110
consensus_8579#2      TCGTAGATTTC-GCAATCCCGCCACAACCGAACGCCAAAATGATTGCCCTAAG-GACGGT 118
consensus_8579#0      TCGTAGATTTCTGCAATCCCGGCACAAC-GAACGCCAAAATGATTGGCCTAAGTGACGGT 113
                      *** *******  ******** ****** ***************** ****** ******

consensus_8579#1      GTGCCAGCTAGCCCGCGTCG-GTCCGTTCAC-GCGCCCCATC----------ACGACCGG 158
consensus_8579#2      GTGCCAGCTAGCCCGCGTCG-GTCCGTTCAC-GCGCCCCATC----------ACGACCGG 166
consensus_8579#0      GTGCCAGCTAGCCCGCGTCGTGTCCGTTCACTGCGCCCCATCTACTGACCTGGCTGTCTG 173
                      ******************** ********** **********           *   * *

consensus_8579#1      CGTCGTGCGGCAG-GCGGAAGCC-GCGGCTGCGTCGG---CCGGAGG-ATCATCG-GCAA 211
consensus_8579#2      CGTCGTGCGGCAG-GCGGAAGCC-GCGGCTGCGTCGG---CCGGAGG-ATCATCG-GCAA 219
consensus_8579#0      TGCTGTGCAGTGCTGTGAATGCCTGCGGCTGCGTCTGTGCCNGGAGNGATCATCGTGCNA 233
                       *  **** *    * * * *** *********** *   * ****  ******* ** *

consensus_8579#1      AGCTCACGATACCGGTGCCGGAGG-GAAC-GGACAAG---CCGGCCGATCC--GAAGCTC 264
consensus_8579#2      AGCTCACGATACCGGTGCCGGAGG-GAAC-GGACAAG---CCGGCCGATCC--GAAGCTC 272
consensus_8579#0      AGCTCACGATACCGGTGCCGGAGGTGAACTGGACAAAGACCTGGCTGATCCTGAAGNCTC 293
                      ************************ **** ******    * *** *****   *  ***

consensus_8579#1      GC-GGCCATCGTCGACAGCA--TCGCCACGC-----TGAACC--TGCTGGAGGTGTCCGA 314
consensus_8579#2      GC-GGCCATCGTCGACAGCA--TCGCCACGC-----TGAACC--TGCTGGAGGTGTCCGA 322
consensus_8579#0      GCTGGGCATCGTCGACAGNNATTCGCCACAGGCTTGTGAACCCTTGNTTGGGAGGTT-GT 352
                      ** ** ************    *******       ******  ** * * *  **  * 

consensus_8579#1      GCTGAGTGCGCTGCTGAA-GCGCA------AGCTGAACCTGCCCGA-CACTGCCATGATG 366
consensus_8579#2      GCTGAGTGCGCTGCTGAA-GCGCA------AGCTGAACCTGCCCGA-CACCGCCATGATG 374
consensus_8579#0      NCNGCACGCCTTGCAGATTGCGCCTTGCTTAGCAAAGACNGCCAAAGCNTTGNAACCTTG 412
                       * *   **  *** **  ****       ***  *  * ***  * *   *  *   **

consensus_8579#1      CCGGCCGGGTTCGGTGCGTTCGCGGGCGGCCCGGCACCGGGG-GCGGCGGCAGCGGCCGA 425
consensus_8579#2      CCGGCCGGGTTCGGTGCGTTCGCGGGCGGTCCGGCACCGGGG-GCGGCGGCAGCGGCCGA 433
consensus_8579#0      GAGCCCGGAAAAANCTGGCCCATTGATTGCCCTGGGCGGGTATACGAGGTTGGCAGGTAT 472
                        * ****         *  *   *   * ** *  * **    **  *   ** *    

consensus_8579#1      CGAGG----AGGAAGCCG----CCCCGAAGGTGGTGAAGACGACGTTCAAGG----TGAA 473
consensus_8579#2      CGAGG----AGGAAGCCG----CCCCGAAGGTGGTGAAGACGACGTTCAAGG----TGAA 481
consensus_8579#0      TCAGGCCAGAGAAGGCTGGTGTCCCCATAGGGCGAACNCCCAGCGACGAGGAGGCACGGA 532
                        ***    ** * ** *    ****  ***  *      *  **   * *      * *

consensus_8579#1      GCTGGT---CAAGTTCGACGAGAAGCAGAAGGTGGCC-CTGATCAAGGAGGTGA-AGAAC 528
consensus_8579#2      GCTGGT---CAAGTTCGACGAGACGCAGAAGGTGGCC-CTGACCAAGGAGGTGA-AGAAC 536
consensus_8579#0      GCCGAGGCACAGACATGATGGNCTGCAGCCTGNAATCGCTGANTGNTGAAATNGCACCAG 592
                      ** *     **     ** *    ****   *    * ****     **  *   *  * 

consensus_8579#1      CTGCTCGAGGGCATGAATCTGGTGCAGGC-GAAGAAGTTCGTCGAGAGTGCGCCGACCGT 587
consensus_8579#2      CTGCTCGAGGGCATGAATCTGGTGCAGGC-GAAGAAGTTCGTCGAGAGTTCGCCGACCGT 595
consensus_8579#0      CGGCCCCCCGGCAAAAAAGAGGTTGAGGTTGGAACAGAGCAACCGAACCACGCTATCCAA 652
                      * ** *   ****  **   ***  ***  * *  **  *  *   *   ***   **  

consensus_8579#1      CGTGAAGGAGGACATACCGAAGGAGGAGGCGGAAAAGCTAAAGGAAGCGTTCACGAA--G 645
consensus_8579#2      CGTGAAGGAGGACATACCGAAGACGGAGGCGGAAAAGCTAAAGGAAGCGTTCACGAA--G 653
consensus_8579#0      CAACGAGGTTGGAANATGGCCATTAGAGGTTCTAAAATGNGTTTATTTCCTGGTGAACCN 712
                      *    ***  *  * *  *      ****    ***        *     *   ***   

consensus_8579#1      GTGGGAGCGGTAATCGAGAT-----TGAGTAGTGGAGGGGAAGGGGGCAACAATCGCGCT 700
consensus_8579#2      GTGGGAGCGGTAATCGAGAT-----TGAGTAGTGGAGGG-AAGGGGGCAACAATCGCGCT 707
consensus_8579#0      CTGTGNANGGCCAATANAANGCCCCTAAGAGGCACAAGAATGNTTCTTGGGGGNAACNCA 772
                       ** *   **  *     *      * **  *   * *                  * * 

consensus_8579#1      TTATTTA-AGCCATTTTAAGCTGTTTAAGTTGAAGTAA--GGATTTAATTAAAACG---- 753
consensus_8579#2      TTTATTT-AGCA--TTTAAGCTGTTTA-GTTGAAGTA---GGATTAAAT--AAACG---- 754
consensus_8579#0      CCCTTCGGAGCAATTTCCCACAAACGGGGCCAAGGAGGTTGAACTAACNGCAAAAACCCA 832
                          *   ***   **    *       *   * *     * * * *    ***      

consensus_8579#1      -AAACACCAATTCTACCCAAAAGAAATATACACAACANAAAAAANAAANTCTANAAAAAA 812
consensus_8579#2      -AA-CACAA--TCCACCTACGGAAAAAAAAAAAAAAAAAAA------------------- 791
consensus_8579#0      TAGGCACTACCGCACACNTCGGAGAGGAGCCATTAGGTGAAAATCANTCTGTGAGTTAGN 892
                       *  *** *   *   *       *  *   *  *    **                   

consensus_8579#1      CCAGGGCCACTTTTTACGGC---------------------------------------- 832
consensus_8579#2      ------------------------------------------------------------
consensus_8579#0      CGACAANGACGCCNCGGTCAANAAANGCAACAAGGTTATTACTANTTTCCCTCACACGTG 952
                                                                                  

consensus_8579#1      ----------------------------------------------
consensus_8579#2      ----------------------------------------------
consensus_8579#0      CAAGATTTTGCATTCGTGCTCTGCTAAGACCNCGGCGTGCNCCAGN 998
                                                                    




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)