cluster # 8584

These datas are free for academic use only, please contact me for any other use.

Anopheles gambiae
cluster # 8584 cluster # 8584 Sequences # 11 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8584#0 length = 1503 sequences # 5
consensus_8584#1 length = 681 sequences # 4

consensus_8584#2 length = 622 sequences # 1
consensus_8584#3 length = 566 sequences # 1

consensusID : consensus_8584#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1503
fasta sequence

                              [TTGTTTTATTTTAACATTTTATTAAGTAAAGCCGGGTTAGATACGCTTGATTTTACTGGTCAAAGGACAGCAGGAGGAACCATGTTTTTTTGCTTTTTTAATTAGTGTTTCTATTGAACCATGCATGTTAGTGTAACTGCAATACTGGAAGAGCCGGGAAAGTGCATAGCATTGTTCGATTTTGTTCGAGTGTGTTCGAGCTATGCGCTGTTATTAAATGACAAACAGATAAGACCAAACTCTCTACTACTCCGCTGCGCGAAAGTTATGCCTTTCAACTGTTTTAATAATTTTTTCCACTGAAACACCCCAACGAATGATCTTGTAGCGCTCCGGTTCGGATAGATCGATCACCGTGGATGCGGCCCTTTGCTCCTCCGACAAACCTAACTGACCTCCATCGAACACGGCCCCCAGCTCACCCCACAGTTCTTTAAACTCTTCCACATTCAGAGTGCTTTTGCTGGAGCTTTTGTTAGCACTGGTCAGTGCTATCGGCTGCTGAAACGCTTCACACACATGCTGTATGAATTTGTTTTCCGTAATTCTTATGCCAATGTTTGCCACACCCGGGTTCAGCGCGGGATTGTTTAATTTCGACGATCTTCGCA-CCACGAGCGTTACCGCTCCGGGGAAAAGTTCACCCAAAAGCTCATCATTTAGATGGTCCGTTTCGCCCCACTGCCGCACATCCTCTATGCTGGCCACACATATGGCGACGGGTTTTAGCTCATGCCGCCCCTTAATATTGTACAACCGGTGTATGGCTTCCGGATTGTTGGCACTGCAGGTAAGCCCATACACGGTATCTGTGGGAATTGCAATCACTTCACCTGCCTGTAGCTTTGCCACTGCTATCGCTTTTGCATCCTTACGGTTAGTCGATATTACCTTCGACTCCTGCTCCTTCACATCTTTCGGTGCGTACCGCAATGTGTACGGTTTTCTGTTAGCGTCGGTATAGTTTTGACGAGTACGAGTACTGTACCTGTGTTTGTGTGTTTGTTTCATACTGCTTACTACAAGGCGCGTGAGTACACTACTAATAATGTTGCTGGAAAACATCGATTTAATGTTGCTTGTATAAACGAGCTTTAGCTTTTACTTAATCGCGCCAATTATGACCACACGTTTGGTTGCAGCACTTGTAAAACGTGGTCATCGGTTCGTCCGCCGAACGGGTCTGCATCTGCATAAAGTAAGCTCGATTATGTGAGCAGGAAGGGCATACGGCATCGGTTGAGTCAACGTTCTCCCATGCTGCGGAACCGCCCATTACATGGTCTACCTCCTTCAGCGTGGGGTAGATGCGGCTGGAAATAGTTCTCCGGATCTTGCAGATGTAAGGACACGTGTTGCAGGAAAACCTGAGCGAGTCGGTGCTCTCTTCCACCAGCAGTACGGTACCGCATGTGGGACAGAACATCAACATTACTAACGATTATTATTAACTAAACTAGCGCCAGCATTCAGCAACGTGGTTTTTTCTAATCGTTTCACCGG]

[+] EMBL CNS08JPZ             [TTGTTTTATTTTAACATTTTATTAAGTAAAGCCGGGTTAGATACGCTTGATTTTACTGGTCAAAGGACAGCAGGAGGAACCATGTTTTTTTGCTTTTTTAATTAGTGTTTCTATTGAACCATGCATGTTAGTGTAACTGCAATACTGGAAGAGCCGGGAAAGTGCATAGCATTGTTCGATTTTGTTCGAGTGTGTTCGAGCTATGCGCTGTTATTAAATGACAAACAGATAAGACCAAACTCTCTACTACTCCGCTGCGCGAAAGTTATGCCTTTCAACTGTTTTAATAATTTTTTCCACTGAAACACCCCAACGAATGATCTTGTAGCGCTCCGGTTCGGATAGATCGATCACCGTGGATGCGGCCCTTTGCTCCTCCGACAAACCTAACTGACCTCCATCGAACACGGCCCCCAGCTCACCCCACAGTTCTTTAAACTCTTCCACATTCAGAGTGCTTTTGCTGGAGCTTTTGTTAGCACTGGTCAGTGCTATCGGCTGCTGAAACGCTTCACACACATGCTGTATGAATTTGTTTTCCGTAATTCTTATGCCAATGTTTGCCACACCCGGGTTCAGCGCGGGATTGTTTAATTTCGACGATCTTCGCA CCACGAGCGTTACCGCTCCGGGGAAAAGTTCACCCAAAAGCTCATCATTTAGATGGTCCGTTTCGCCCCACTGCCGCACATCCTCTATGCTGGCCACACATATGGCGACGGGTTTTAGCTCATGCCGCCCCTTAATATTGTACAACCGGTGTATGGCTTCCGGATTGTTGGCACTGCAGGTAAGCCCATACACGGTATCTGTGGGAATTGCAATCACTTCACCTGCCTGTAGCTTTGCCACTGCTATCGCTTTTGCATCCTTACGGTTAGTCGATATTACCTTCGACTCCTGCTCCTTCACATCTTTCGGTGCGTACCGCAATGTGTACGGTTTTCTGTTAGCGTCGGTATAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CNS08JPY             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                 TCAGAAAAATTTTGCTGGAGCTTTTGTTAGCACTGGTCAGTGCTATCGGCTGCTGAAACGCTTAACACACATGCTGTATGAATTTGTTTTCCGTAATTCTTATGCCAATG TTGCCACACCCGGGTTCAGCGCGGGATTGTTTAATTTCGACGATCTTCGCACCCACGA CGTTACCGCTCCGGGGAAAAGTTCACCCAAAAGCTCATCATTTAGATGGTCCGTTTCGCCCCACTGCCGCACATCCTCTATGCTGGCCACACATATGGCGACGGGTTTTAGCTCATGCCGCCCCTTAATATTGTACAACCGGTGTATGGCTTCCGGATTGTTGGCACTGCAGGTAAGCCCATACACGGTATCTGTGGGAATTGCAATCACTTCACCTGCCTGTAGCTTTGCCACTGCTATCGCTTTTGCAT CTTACGGTTAGTCGATATTACCTTCGACTCCTGCTCCTTCACATCTTTCGGTGCGTACCGCAATGTGTACGGTTTTCTGTTAGCGTCGGTATAGTTTTGACGAGTACGAGTACTGTACCTGTGTTTGTGTGTTTGTTTCATACTGCTTACTACAAGGCGCGTGAGTACACTACTAATAATGTTGCTGGAAAACATCGATTTAATGTTGCTTGTATAAACGAGCTTTAGCTTTTACTTAATCGCGCCAATTATGACCACACGTTTGGTTGCAGCACTTGTAAAACGTGGTCATCGGTTCGTCCGCCGAACGGGTCTGCATCTGCATAAAGTAAGCTCGATTATGTGAGCAGGAAGGGCATACGGCATCGGTTGAGTCAACGTTCTCCCATGCTGCGGAACCGCCCATTACATGGTCTACCTCCTTCAGCGTGGGGTAGATGCGGCTGGAAATAGTTCTCCGGATCTTGCAGATGTAA                                                                                                                                                             ]
[-] EMBL BM654327             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    CACACCCGGGTTCAGCGCGGGATTGTTTAATTTCGACGATCTTCGCA CCACGAGCGTTACCGCTCCGGGGAAAAGTTCACCCAAAAGCTCATCATTTAGATGGTCCGTTTCGCCCCACTGCCGCACATCCTCTATGCTGGCCACACATATGGCGACGGGTTTTAGCTCATGCCGCCCCTTAATATTGTACAACCGGTGTATGGCTTCCGGATTGTTGGCACTGCAGGTAAGCCCATACACGGTATCTGTGGGAATTGCAATCACTTCACCTGCCTGTAGCTTTGCCACTGCTATCGCTTTTGCATCCTTACGGTTAGTCGATATTACCTTCGACTCCTGCTCCTTCACATCTTTCGGTGCGTACCGCAATGTGTACGGTTTTCTGTTAGCGTCGGTATAGTTTTGACGAGTACGAGTACTGTACCTGTGTTTGTGTGTTTGTTTCATACTGCTTACTACAAGGCGCGTGAGTACACTACTAATAATGTTGCTGGAAAACATCGATTTAATGTTGCTTGTATAAACGAGCTTTAGCTTTTACTTAATCGCGCCAATTATGACCACACGTTTGGTTGCAGCACTTGTAAAACGTGGTCATCGGTTCGTCCGCCGAACGGGTCTGCATCTGCATAAAGTAAGCTCGATTATGTGAGCAGGAAGGGCATACGcgg                                                                                                                                                                                                                                                                            ]
[-] EMBL BM595631             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ATGGCTTCCGGATTGTTGGCACTGCAGGTAAGCCCATACACGGTATCTGTGGGAATTGCAATCACTTCACCTGCCTGTAGCTTTGCCACTGCTATCGCTTTTGCATCCTTACGGTTAGTCGATATTACCTTCGACTCCTGCTCCTTCACATCTTTCGGTGCGTACCGCAATGTGTACGGTTTTCTGTTAGCGTCGGTATAGTTTTGACGAGTACGAGTACTGTACCTGTGTTTGTGTGTTTGTTTCATACTGCTTACTACAAGGCGCGTGAGTACACTACTAATAATGTTGCTGGAAAACATCGATTTAATGTTGCTTGTATAAACGAGCTTTAGCTTTTACTTAATCGCGCCAATTATGACCACACGTTTGGTTGCAGCACTTGTAAAACGTGGTCATCGGTTCGTCCGCCGAACGGGTCTGCATCTGCATAAAGTAAGCTCGATTATGTGAGCAGGAAGGGCATACGGCATCGGTTGAGTCAACGTTCTCCCATGCTGCGGAACCGCCCATTACATGGTCTACCTCCTTCAGCGTGGGGTAGATGCGGCTGCAAATAGTTCTCCGGATCTTGCAGATGTAAGGACACGTGTTGCAGGAAAACCTGAGCGAGTCGGTGCTCTCTTCCACCAGCAGTACGG                                                                                                   ]
[-] EMBL BM636356             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          CTGTGGGAATTGCAATCACTTCACCTGCCTGTAGCTTTGCCACTGCTATCGCTTTTGCATCCTTACGGTTAGTCGATATTACCTTCGACTCCTGCTCCTTCACATCTTTCGGTGCGTACCGCAATGTGTACGGTTTTCTGTTAGCGTCGGTATAGTTTTGACGAGTACGAGTACTGTACCTGTGTTTGTGTGTTTGTTTCATACTGCTTACTACAAGGCGCGTGAGTACACTACTAATAATGTTGCTGGAAAACATCGATTTAATGTTGCTTGTATAAACGAGCTTTAGCTTTTACTTAATCGCGCCAATTATGACCACACGTTTGGTTGCAGCACTTGTAAAACGTGGTCATCGGTTCGTCCGCCGAACGGGTCTGCATCTGCATAAAGTAAGCTCGATTATGTGAGCAGGAAGGGCATACGGCATCGGTTGAGTCAACGTTCTCCCATGCTGCGGAACCGCCCATTACATGGTCTACCTCCTTCAGCGTGGGGTAGATGCGGCTGGAAATAGTTCTCCGGATCTTGCAGATGTAAGGACACGTGTTGCAGGAAAACCTGAGCGAGTCGGTGCTCTCTTCCACCAGCAGTAGATTACCGCATGTGGGACAGAACATCAACATTACTAACGATTATTATTAACTAAACTAGCGCCAGCATTCAGCAACGTGGTTTTTTCTAATCGTTTCACCGG]




>consensus_8584#0
TTGTTTTATTTTAACATTTTATTAAGTAAAGCCGGGTTAGATACGCTTGATTTTACTGGT
CAAAGGACAGCAGGAGGAACCATGTTTTTTTGCTTTTTTAATTAGTGTTTCTATTGAACC
ATGCATGTTAGTGTAACTGCAATACTGGAAGAGCCGGGAAAGTGCATAGCATTGTTCGAT
TTTGTTCGAGTGTGTTCGAGCTATGCGCTGTTATTAAATGACAAACAGATAAGACCAAAC
TCTCTACTACTCCGCTGCGCGAAAGTTATGCCTTTCAACTGTTTTAATAATTTTTTCCAC
TGAAACACCCCAACGAATGATCTTGTAGCGCTCCGGTTCGGATAGATCGATCACCGTGGA
TGCGGCCCTTTGCTCCTCCGACAAACCTAACTGACCTCCATCGAACACGGCCCCCAGCTC
ACCCCACAGTTCTTTAAACTCTTCCACATTCAGAGTGCTTTTGCTGGAGCTTTTGTTAGC
ACTGGTCAGTGCTATCGGCTGCTGAAACGCTTCACACACATGCTGTATGAATTTGTTTTC
CGTAATTCTTATGCCAATGTTTGCCACACCCGGGTTCAGCGCGGGATTGTTTAATTTCGA
CGATCTTCGCACCACGAGCGTTACCGCTCCGGGGAAAAGTTCACCCAAAAGCTCATCATT
TAGATGGTCCGTTTCGCCCCACTGCCGCACATCCTCTATGCTGGCCACACATATGGCGAC
GGGTTTTAGCTCATGCCGCCCCTTAATATTGTACAACCGGTGTATGGCTTCCGGATTGTT
GGCACTGCAGGTAAGCCCATACACGGTATCTGTGGGAATTGCAATCACTTCACCTGCCTG
TAGCTTTGCCACTGCTATCGCTTTTGCATCCTTACGGTTAGTCGATATTACCTTCGACTC
CTGCTCCTTCACATCTTTCGGTGCGTACCGCAATGTGTACGGTTTTCTGTTAGCGTCGGT
ATAGTTTTGACGAGTACGAGTACTGTACCTGTGTTTGTGTGTTTGTTTCATACTGCTTAC
TACAAGGCGCGTGAGTACACTACTAATAATGTTGCTGGAAAACATCGATTTAATGTTGCT
TGTATAAACGAGCTTTAGCTTTTACTTAATCGCGCCAATTATGACCACACGTTTGGTTGC
AGCACTTGTAAAACGTGGTCATCGGTTCGTCCGCCGAACGGGTCTGCATCTGCATAAAGT
AAGCTCGATTATGTGAGCAGGAAGGGCATACGGCATCGGTTGAGTCAACGTTCTCCCATG
CTGCGGAACCGCCCATTACATGGTCTACCTCCTTCAGCGTGGGGTAGATGCGGCTGGAAA
TAGTTCTCCGGATCTTGCAGATGTAAGGACACGTGTTGCAGGAAAACCTGAGCGAGTCGG
TGCTCTCTTCCACCAGCAGTACGGTACCGCATGTGGGACAGAACATCAACATTACTAACG
ATTATTATTAACTAAACTAGCGCCAGCATTCAGCAACGTGGTTTTTTCTAATCGTTTCAC
CGG

consensusID : consensus_8584#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 681
fasta sequence

                              [GGTATCTGTGGGAATTGCAATCACTTCCACCTGCCTGTAGCTTTGCCACTGCTATCGCTTTTGCATCCTTACGGTTAGTCGATATTACCTTCGACTCCTGCTCCTTCACATCTTTCGGTGCGTACCGCAATGTGTACGGTTTTCTGTTAGCGTCGGTATAGTTTTGACGAGTACGAGTACTGTACCTGTGTTTGTGTGTTTGTTTCATACTGCTTACTACAAGGCGCGTGAGTACACTACTAATAATGTTGCTGGAAAACATCGATTTAATGTTGCTTGTATAAACGAGCTTTAGCTTTTACTTAATCGCGCCAATTATGACCACACGTTTGGTTGCAGCACTTGTAAAACGTGGTCATCGGTTCGTCCGCCGAACGGGTCTGCATCTGCATAAAGTAAGCTCGATTATGTGAGCAGGAAGGGCATACGGCATCGGTTGAGTCAACGTTCTCCCATGCTGCGGAACCGCCCATTACATGGTCTACCTCCTTCAGCGTGGGGTAGATGCGGCTGGAAATAGTTCTCCGGATCTTGCAGATGTAAGGACACGTGTTGCAGGAAAACCTGAGCGAGTCGGTGCTCTCTTCCACCAGCAGTAGATTACCGCATGTGGGACAGAACATCAACATT--CGGACGCGTGGGCGGACGCGTGGGCGGACGCGTGGGCGGACGCGTGGGCGG]

[-] EMBL BM635152             [GGTATCTGTGGGAATTGCAATCACTTCCACCTGCCTGTAGCTTTGCCACTGCTATCGCTTTTGCATCCTTACGGTTAGTCGATATTACCTTCGACTCCTGCTCCTTCACATCTTTCGGTGCGTACCGCAATGTGTACGGTTTTCTGTTAGCGTCGGTATAGTTTTGACGAGTACGAGTACTGTACCTGTGTTTGTGTGTTTGTTTCATACTGCTTACTACAAGGCGCGTGAGTACACTACTAATAATGTTGCTGGAAAACATCGATTTAATGTTGCTTGTATAAACGAGCTTTAGCTTTTACTTAATCGCGCCAATTATGACCACACGTTTGGTTGCAGCACTTGTAAAACGTGGTCATCGGTTCGTCCGCCGAACGGGTCTGCATCTGCATAAAGTAAGCTCGATTATGTGAGCAGGAAGGGCATACGGCATCGGTTGAGTCAACGTTCTCCCATGCTGCGGAACCGCCCATTACATGGTCTACCTCCTTCAGCGTGGGGTAGATGCGGCTGGAAATAGTTCTCCGGATCTTGCAGATGTAAGGACACGTGTTGCAGGAAAACCTGAGCGAGTCGGTGCTCTCTTCCACCAGCAGTAGATTACCGCATGTGGGACAGAACATCAACATT  CGGACGCGTGGGCGGACGCGTGGGCGG                        ]
[-] EMBL AGAA13355            [                                                                         ggTAGTCGATATTACCTTCGACTCCTGCTCCTTCACATCTTT     CGTACCGCAATGTGTACGGTTTTCTGTTAGCGTCGGTATAGTTTTGACGAGTACGAGTACTGTACCTGTGTTTGTGTGTTTGTTTCATACTGCTTACTACAAGGCGCGTGAGTACACTACTAATAATGTTGCTGGAAAACATCGATTTAATGTTGCTTGTATAAACGAGCTTTAGCTTTTACTTAATCGCGCCAATTATGACCACACGTTTGGTTGCAGCACTTGTAAAACGTGGTCATCGGTTCGTCCGCCGAACGGGTCTGCATCTGCATAAAGTAAGCTCG TTATGTGAGCA GAA GGCATACGGCATCGGTTGAGTCAACGTTCTCCCATGCT CGGAACCG CCATTACATGGTCTACCTCCTTCAGCGTGGCGTAGATGCGGCTGGAAATAGTTCTCCGGATCTTGCAGATGTAAGGACACGTGTTGCAGGAAAACCTGAGCGAGTCGGTGCTCTCTTCCACCAGCAGTAGATTACCGCATGTGGGACAG                                                                 ]
[-] EMBL BM614226             [                                                                                          TCGACTCCTGCTCCTTCACATCTTTCGGTGCGTACCGCAATGTGTACGGTTTTCTGTTAGCGTCGGTATAGTTTTGACGAGTACGAGTACTGTACCTGTGTTTGTGTGTTTGTTTCATACTGCTTACTACAAGGCGCGTGAGTACACTACTAATAATGTTGCTGGAAAACATCGATTTAATGTTGCTTGTATAAACGAGCTTTAGCTTTTACTTAATCGCGCCAATTATGACCACACGTTTGGTTGCAGCACTTGTAAAACGTGGTCATCGGTTCGTCCGCCGAACGGGTCTGCATCTGCATAAAGTAAGCTCGATTATGTGAGCAGGAAGGGCATACGGCATCGGTTGAGTCAACGTTCTCCCATGCTGCGGAACCGCCCATTACATGGTCTACCTCCTTCAGCGTGGGGTAGATGCGGCTGGAAATAGTTCTCCGGATCTTGCAGATGTAAGGACACGTGTTGCAGGAAAACCTGAGCGAGTCGGTGCTCTCTTCCACCAGCAGTAGATTACCGCATGTGGGACAGAACATCAACATTACCGGACGCGTGGGCGGACGCGTGGGCGGACGCGTGGGCGGACGCGTGGGCGG]
[-] EMBL BX603807             [                                                                                                                                                              TAGTTTTGACGAGTACGAGTACTGTACCTGTGTTTGTGTGTTTGTTTCATACTGCTTACTACAAGGCGCGTGAGTACACTACTAATAATGTTGCTGGAAAACATCGATTTAATGTTGCTTGTATAAACGAGCTTTAGCTTTTACTTAATCGCGCCAATTATGACCACACGTTTGGTTGCAGCACTTGTAAAACGTGGTCATCGGTTCGTCCGCCGAACGGGTCTGCATCTGCATAAAGTAAGCTCGATTATGTGAGCAGGAAGGGCATACGGCATCGGTTGAGTCAACGTTCTCCCATGCTGCGGAACCGCCCATTACATGGTCTACCTCCTTCAGCGTGGGGTAGATGCGGCTGGAAATAGTTCTCCGGATCTTGCAGATGTAAGGACACGTGTTGCAGGAAAACCTGAGCGAGTCGGTGCTCTCTTCCACCAGCAGTAGATTACCGCATGTGGGACAGAACATCAACA                                                       ]




>consensus_8584#1
GGTATCTGTGGGAATTGCAATCACTTCCACCTGCCTGTAGCTTTGCCACTGCTATCGCTT
TTGCATCCTTACGGTTAGTCGATATTACCTTCGACTCCTGCTCCTTCACATCTTTCGGTG
CGTACCGCAATGTGTACGGTTTTCTGTTAGCGTCGGTATAGTTTTGACGAGTACGAGTAC
TGTACCTGTGTTTGTGTGTTTGTTTCATACTGCTTACTACAAGGCGCGTGAGTACACTAC
TAATAATGTTGCTGGAAAACATCGATTTAATGTTGCTTGTATAAACGAGCTTTAGCTTTT
ACTTAATCGCGCCAATTATGACCACACGTTTGGTTGCAGCACTTGTAAAACGTGGTCATC
GGTTCGTCCGCCGAACGGGTCTGCATCTGCATAAAGTAAGCTCGATTATGTGAGCAGGAA
GGGCATACGGCATCGGTTGAGTCAACGTTCTCCCATGCTGCGGAACCGCCCATTACATGG
TCTACCTCCTTCAGCGTGGGGTAGATGCGGCTGGAAATAGTTCTCCGGATCTTGCAGATG
TAAGGACACGTGTTGCAGGAAAACCTGAGCGAGTCGGTGCTCTCTTCCACCAGCAGTAGA
TTACCGCATGTGGGACAGAACATCAACATTCGGACGCGTGGGCGGACGCGTGGGCGGACG
CGTGGGCGGACGCGTGGGCGG

consensusID : consensus_8584#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 622
fasta sequence

                              [ACACGGTATCTGTGGGAATTGCAATCACTTCACCTGCCTGTAGCTTTGCCACTGCTATCGCTTTTGCATCCTTACGGTTAGTCGATATTACCTTCGACTCCTGCTCCTTCACATCTTTCGGTGCGTACCGCAATGTGTACGGTTTTCTGTTAGCGTCGGTATAGTTTTGACGAGTACGAGTACTGTACCTGTGTTTGTGTGTTTGTTTCATACTGCTTACTACAAGGCGCGTGAGTACACTACTAATAATGTTGCTGGAAAACATCGATTTAATGTTGCTTGTATAAACGAGCTTTAGCTTTTACTTAATCGCGCCAATTATGACCACACGTTTGGTTGCAGCACTTGTAAAACGTGGTCATCGGTTCGTCCGCCGAACGGGTCTGCATCTGCATAAAGTAAGCTCGATTATGTGAGCAGGAAGGGCATACGGCATCGGTTGAGTCAACGTTCTCCCATGCTGCGGAACCGCCCATTACATGGTCTACCTCCTTCAGCGTGGGGTAGATGCGGCTGGAAATAGTTCTCCGGATCTTGCAGATGTAAGGACACGTGTTGCAGGAAAACCTGAGCGAGTCGGTGCTCTCTTCCACCACCCACGCGTCCGCCCACGCGTCCGCGG]

[-] EMBL BM610138             [ACACGGTATCTGTGGGAATTGCAATCACTTCACCTGCCTGTAGCTTTGCCACTGCTATCGCTTTTGCATCCTTACGGTTAGTCGATATTACCTTCGACTCCTGCTCCTTCACATCTTTCGGTGCGTACCGCAATGTGTACGGTTTTCTGTTAGCGTCGGTATAGTTTTGACGAGTACGAGTACTGTACCTGTGTTTGTGTGTTTGTTTCATACTGCTTACTACAAGGCGCGTGAGTACACTACTAATAATGTTGCTGGAAAACATCGATTTAATGTTGCTTGTATAAACGAGCTTTAGCTTTTACTTAATCGCGCCAATTATGACCACACGTTTGGTTGCAGCACTTGTAAAACGTGGTCATCGGTTCGTCCGCCGAACGGGTCTGCATCTGCATAAAGTAAGCTCGATTATGTGAGCAGGAAGGGCATACGGCATCGGTTGAGTCAACGTTCTCCCATGCTGCGGAACCGCCCATTACATGGTCTACCTCCTTCAGCGTGGGGTAGATGCGGCTGGAAATAGTTCTCCGGATCTTGCAGATGTAAGGACACGTGTTGCAGGAAAACCTGAGCGAGTCGGTGCTCTCTTCCACCACCCACGCGTCCGCCCACGCGTCCGCGG]




>consensus_8584#2
ACACGGTATCTGTGGGAATTGCAATCACTTCACCTGCCTGTAGCTTTGCCACTGCTATCG
CTTTTGCATCCTTACGGTTAGTCGATATTACCTTCGACTCCTGCTCCTTCACATCTTTCG
GTGCGTACCGCAATGTGTACGGTTTTCTGTTAGCGTCGGTATAGTTTTGACGAGTACGAG
TACTGTACCTGTGTTTGTGTGTTTGTTTCATACTGCTTACTACAAGGCGCGTGAGTACAC
TACTAATAATGTTGCTGGAAAACATCGATTTAATGTTGCTTGTATAAACGAGCTTTAGCT
TTTACTTAATCGCGCCAATTATGACCACACGTTTGGTTGCAGCACTTGTAAAACGTGGTC
ATCGGTTCGTCCGCCGAACGGGTCTGCATCTGCATAAAGTAAGCTCGATTATGTGAGCAG
GAAGGGCATACGGCATCGGTTGAGTCAACGTTCTCCCATGCTGCGGAACCGCCCATTACA
TGGTCTACCTCCTTCAGCGTGGGGTAGATGCGGCTGGAAATAGTTCTCCGGATCTTGCAG
ATGTAAGGACACGTGTTGCAGGAAAACCTGAGCGAGTCGGTGCTCTCTTCCACCACCCAC
GCGTCCGCCCACGCGTCCGCGG

consensusID : consensus_8584#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 566
fasta sequence

                              [CGGTTAGTCGATATTACCTTCGACTCCTGCTCCTTCACATCTTTCGGTGCGTACCGCAATGTGTACGGTTTTCTGTAGCGTCGGTATAGTTTTGACGAGTACGAGTACTGTACCTGTGTTTGTGTGTTTGTTTCATACTGCTTACTACAAGGCGCGTGAGTACACTACTAATAATGTTGCTGGAAAACATCGATTTAATGTTGCTTGTATAAACGAGCTTTAGCTTTTACTTAATCGCGCCAATTATGACCACACGTTTGGTTGCAGCACTTGTAAAACGTGGTCATCGGTTCGTCCGCCGAACGGGTCTGCATCTGCATAAAGTAAGCTCGATTATGTGAGCAGGAAGGGCATACGGCATCGGTTGAGTCAACGTTCTCCCATGCTGCGGAACCGCCCATTACATGGTCTACCTCCTTCAGCGTGGGGTAGATGCGGCTGGAAATAGTTCTCCGGATCTTGCAGATGTAAGGACACGTGTTGCAGGAAAACCTGAGCGAGTCGGTGCTCTCTTCCACCAGCAGTAGATTACCGCATGTGGGACANGANACTCGTGCGGGATTCTG]

[-] EMBL BX466263             [CGGTTAGTCGATATTACCTTCGACTCCTGCTCCTTCACATCTTTCGGTGCGTACCGCAATGTGTACGGTTTTCTGTAGCGTCGGTATAGTTTTGACGAGTACGAGTACTGTACCTGTGTTTGTGTGTTTGTTTCATACTGCTTACTACAAGGCGCGTGAGTACACTACTAATAATGTTGCTGGAAAACATCGATTTAATGTTGCTTGTATAAACGAGCTTTAGCTTTTACTTAATCGCGCCAATTATGACCACACGTTTGGTTGCAGCACTTGTAAAACGTGGTCATCGGTTCGTCCGCCGAACGGGTCTGCATCTGCATAAAGTAAGCTCGATTATGTGAGCAGGAAGGGCATACGGCATCGGTTGAGTCAACGTTCTCCCATGCTGCGGAACCGCCCATTACATGGTCTACCTCCTTCAGCGTGGGGTAGATGCGGCTGGAAATAGTTCTCCGGATCTTGCAGATGTAAGGACACGTGTTGCAGGAAAACCTGAGCGAGTCGGTGCTCTCTTCCACCAGCAGTAGATTACCGCATGTGGGACANGANACTCGTGCGGGATTCTG]




>consensus_8584#3
CGGTTAGTCGATATTACCTTCGACTCCTGCTCCTTCACATCTTTCGGTGCGTACCGCAAT
GTGTACGGTTTTCTGTAGCGTCGGTATAGTTTTGACGAGTACGAGTACTGTACCTGTGTT
TGTGTGTTTGTTTCATACTGCTTACTACAAGGCGCGTGAGTACACTACTAATAATGTTGC
TGGAAAACATCGATTTAATGTTGCTTGTATAAACGAGCTTTAGCTTTTACTTAATCGCGC
CAATTATGACCACACGTTTGGTTGCAGCACTTGTAAAACGTGGTCATCGGTTCGTCCGCC
GAACGGGTCTGCATCTGCATAAAGTAAGCTCGATTATGTGAGCAGGAAGGGCATACGGCA
TCGGTTGAGTCAACGTTCTCCCATGCTGCGGAACCGCCCATTACATGGTCTACCTCCTTC
AGCGTGGGGTAGATGCGGCTGGAAATAGTTCTCCGGATCTTGCAGATGTAAGGACACGTG
TTGCAGGAAAACCTGAGCGAGTCGGTGCTCTCTTCCACCAGCAGTAGATTACCGCATGTG
GGACANGANACTCGTGCGGGATTCTG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8584#1      ------------------------------------------------------------
consensus_8584#3      ------------------------------------------------------------
consensus_8584#0      TTGTTTTATTTTAACATTTTATTAAGTAAAGCCGGGTTAGATACGCTTGATTTTACTGGT 60
consensus_8584#2      ------------------------------------------------------------
                                                                                  

consensus_8584#1      ------------------------------------------------------------
consensus_8584#3      ------------------------------------------------------------
consensus_8584#0      CAAAGGACAGCAGGAGGAACCATGTTTTTTTGCTTTTTTAATTAGTGTTTCTATTGAACC 120
consensus_8584#2      ------------------------------------------------------------
                                                                                  

consensus_8584#1      ------------------------------------------------------------
consensus_8584#3      ------------------------------------------------------------
consensus_8584#0      ATGCATGTTAGTGTAACTGCAATACTGGAAGAGCCGGGAAAGTGCATAGCATTGTTCGAT 180
consensus_8584#2      ------------------------------------------------------------
                                                                                  

consensus_8584#1      ------------------------------------------------------------
consensus_8584#3      ------------------------------------------------------------
consensus_8584#0      TTTGTTCGAGTGTGTTCGAGCTATGCGCTGTTATTAAATGACAAACAGATAAGACCAAAC 240
consensus_8584#2      ------------------------------------------------------------
                                                                                  

consensus_8584#1      ------------------------------------------------------------
consensus_8584#3      ------------------------------------------------------------
consensus_8584#0      TCTCTACTACTCCGCTGCGCGAAAGTTATGCCTTTCAACTGTTTTAATAATTTTTTCCAC 300
consensus_8584#2      ------------------------------------------------------------
                                                                                  

consensus_8584#1      ------------------------------------------------------------
consensus_8584#3      ------------------------------------------------------------
consensus_8584#0      TGAAACACCCCAACGAATGATCTTGTAGCGCTCCGGTTCGGATAGATCGATCACCGTGGA 360
consensus_8584#2      ------------------------------------------------------------
                                                                                  

consensus_8584#1      ------------------------------------------------------------
consensus_8584#3      ------------------------------------------------------------
consensus_8584#0      TGCGGCCCTTTGCTCCTCCGACAAACCTAACTGACCTCCATCGAACACGGCCCCCAGCTC 420
consensus_8584#2      ------------------------------------------------------------
                                                                                  

consensus_8584#1      ------------------------------------------------------------
consensus_8584#3      ------------------------------------------------------------
consensus_8584#0      ACCCCACAGTTCTTTAAACTCTTCCACATTCAGAGTGCTTTTGCTGGAGCTTTTGTTAGC 480
consensus_8584#2      ------------------------------------------------------------
                                                                                  

consensus_8584#1      ------------------------------------------------------------
consensus_8584#3      ------------------------------------------------------------
consensus_8584#0      ACTGGTCAGTGCTATCGGCTGCTGAAACGCTTCACACACATGCTGTATGAATTTGTTTTC 540
consensus_8584#2      ------------------------------------------------------------
                                                                                  

consensus_8584#1      ------------------------------------------------------------
consensus_8584#3      ------------------------------------------------------------
consensus_8584#0      CGTAATTCTTATGCCAATGTTTGCCACACCCGGGTTCAGCGCGGGATTGTTTAATTTCGA 600
consensus_8584#2      ------------------------------------------------------------
                                                                                  

consensus_8584#1      ------------------------------------------------------------
consensus_8584#3      ------------------------------------------------------------
consensus_8584#0      CGATCTTCGCACCACGAGCGTTACCGCTCCGGGGAAAAGTTCACCCAAAAGCTCATCATT 660
consensus_8584#2      ------------------------------------------------------------
                                                                                  

consensus_8584#1      ------------------------------------------------------------
consensus_8584#3      ------------------------------------------------------------
consensus_8584#0      TAGATGGTCCGTTTCGCCCCACTGCCGCACATCCTCTATGCTGGCCACACATATGGCGAC 720
consensus_8584#2      ------------------------------------------------------------
                                                                                  

consensus_8584#1      ------------------------------------------------------------
consensus_8584#3      ------------------------------------------------------------
consensus_8584#0      GGGTTTTAGCTCATGCCGCCCCTTAATATTGTACAACCGGTGTATGGCTTCCGGATTGTT 780
consensus_8584#2      ------------------------------------------------------------
                                                                                  

consensus_8584#1      ------------------------GGTATCTGTGGGAATTGCAATCACTTCCACCTGCCT 36
consensus_8584#3      ------------------------------------------------------------
consensus_8584#0      GGCACTGCAGGTAAGCCCATACACGGTATCTGTGGGAATTGCAATCACTTC-ACCTGCCT 839
consensus_8584#2      --------------------ACACGGTATCTGTGGGAATTGCAATCACTTC-ACCTGCCT 39
                                                                                  

consensus_8584#1      GTAGCTTTGCCACTGCTATCGCTTTTGCATCCTTACGGTTAGTCGATATTACCTTCGACT 96
consensus_8584#3      -----------------------------------CGGTTAGTCGATATTACCTTCGACT 25
consensus_8584#0      GTAGCTTTGCCACTGCTATCGCTTTTGCATCCTTACGGTTAGTCGATATTACCTTCGACT 899
consensus_8584#2      GTAGCTTTGCCACTGCTATCGCTTTTGCATCCTTACGGTTAGTCGATATTACCTTCGACT 99
                                                         *************************

consensus_8584#1      CCTGCTCCTTCACATCTTTCGGTGCGTACCGCAATGTGTACGGTTTTCTGTTAGCGTCGG 156
consensus_8584#3      CCTGCTCCTTCACATCTTTCGGTGCGTACCGCAATGTGTACGGTTTTCTGT-AGCGTCGG 84
consensus_8584#0      CCTGCTCCTTCACATCTTTCGGTGCGTACCGCAATGTGTACGGTTTTCTGTTAGCGTCGG 959
consensus_8584#2      CCTGCTCCTTCACATCTTTCGGTGCGTACCGCAATGTGTACGGTTTTCTGTTAGCGTCGG 159
                      *************************************************** ********

consensus_8584#1      TATAGTTTTGACGAGTACGAGTACTGTACCTGTGTTTGTGTGTTTGTTTCATACTGCTTA 216
consensus_8584#3      TATAGTTTTGACGAGTACGAGTACTGTACCTGTGTTTGTGTGTTTGTTTCATACTGCTTA 144
consensus_8584#0      TATAGTTTTGACGAGTACGAGTACTGTACCTGTGTTTGTGTGTTTGTTTCATACTGCTTA 1019
consensus_8584#2      TATAGTTTTGACGAGTACGAGTACTGTACCTGTGTTTGTGTGTTTGTTTCATACTGCTTA 219
                      ************************************************************

consensus_8584#1      CTACAAGGCGCGTGAGTACACTACTAATAATGTTGCTGGAAAACATCGATTTAATGTTGC 276
consensus_8584#3      CTACAAGGCGCGTGAGTACACTACTAATAATGTTGCTGGAAAACATCGATTTAATGTTGC 204
consensus_8584#0      CTACAAGGCGCGTGAGTACACTACTAATAATGTTGCTGGAAAACATCGATTTAATGTTGC 1079
consensus_8584#2      CTACAAGGCGCGTGAGTACACTACTAATAATGTTGCTGGAAAACATCGATTTAATGTTGC 279
                      ************************************************************

consensus_8584#1      TTGTATAAACGAGCTTTAGCTTTTACTTAATCGCGCCAATTATGACCACACGTTTGGTTG 336
consensus_8584#3      TTGTATAAACGAGCTTTAGCTTTTACTTAATCGCGCCAATTATGACCACACGTTTGGTTG 264
consensus_8584#0      TTGTATAAACGAGCTTTAGCTTTTACTTAATCGCGCCAATTATGACCACACGTTTGGTTG 1139
consensus_8584#2      TTGTATAAACGAGCTTTAGCTTTTACTTAATCGCGCCAATTATGACCACACGTTTGGTTG 339
                      ************************************************************

consensus_8584#1      CAGCACTTGTAAAACGTGGTCATCGGTTCGTCCGCCGAACGGGTCTGCATCTGCATAAAG 396
consensus_8584#3      CAGCACTTGTAAAACGTGGTCATCGGTTCGTCCGCCGAACGGGTCTGCATCTGCATAAAG 324
consensus_8584#0      CAGCACTTGTAAAACGTGGTCATCGGTTCGTCCGCCGAACGGGTCTGCATCTGCATAAAG 1199
consensus_8584#2      CAGCACTTGTAAAACGTGGTCATCGGTTCGTCCGCCGAACGGGTCTGCATCTGCATAAAG 399
                      ************************************************************

consensus_8584#1      TAAGCTCGATTATGTGAGCAGGAAGGGCATACGGCATCGGTTGAGTCAACGTTCTCCCAT 456
consensus_8584#3      TAAGCTCGATTATGTGAGCAGGAAGGGCATACGGCATCGGTTGAGTCAACGTTCTCCCAT 384
consensus_8584#0      TAAGCTCGATTATGTGAGCAGGAAGGGCATACGGCATCGGTTGAGTCAACGTTCTCCCAT 1259
consensus_8584#2      TAAGCTCGATTATGTGAGCAGGAAGGGCATACGGCATCGGTTGAGTCAACGTTCTCCCAT 459
                      ************************************************************

consensus_8584#1      GCTGCGGAACCGCCCATTACATGGTCTACCTCCTTCAGCGTGGGGTAGATGCGGCTGGAA 516
consensus_8584#3      GCTGCGGAACCGCCCATTACATGGTCTACCTCCTTCAGCGTGGGGTAGATGCGGCTGGAA 444
consensus_8584#0      GCTGCGGAACCGCCCATTACATGGTCTACCTCCTTCAGCGTGGGGTAGATGCGGCTGGAA 1319
consensus_8584#2      GCTGCGGAACCGCCCATTACATGGTCTACCTCCTTCAGCGTGGGGTAGATGCGGCTGGAA 519
                      ************************************************************

consensus_8584#1      ATAGTTCTCCGGATCTTGCAGATGTAAGGACACGTGTTGCAGGAAAACCTGAGCGAGTCG 576
consensus_8584#3      ATAGTTCTCCGGATCTTGCAGATGTAAGGACACGTGTTGCAGGAAAACCTGAGCGAGTCG 504
consensus_8584#0      ATAGTTCTCCGGATCTTGCAGATGTAAGGACACGTGTTGCAGGAAAACCTGAGCGAGTCG 1379
consensus_8584#2      ATAGTTCTCCGGATCTTGCAGATGTAAGGACACGTGTTGCAGGAAAACCTGAGCGAGTCG 579
                      ************************************************************

consensus_8584#1      GTGCTCTCTTCCACCAGCAGTAGATTACCGCATGTGGGACAGAACATCAACATTCGGACG 636
consensus_8584#3      GTGCTCTCTTCCACCAGCAGTAGATTACCGCATGTGGGACANGANACT--CGTGCGGGAT 562
consensus_8584#0      GTGCTCTCTTCCACCAGCAGTACGGTACCGCATGTGGGACAGAACATCAACATTACTAAC 1439
consensus_8584#2      GTGCTCTCTTCCACCACCCACGCGTCCGCCCACGCGTCCGCGG----------------- 622
                      **************** *          * ** * *                        

consensus_8584#1      CGTGGGCGGACGCGTGGGCGGACGCGTGGGCGGACGCGTGGGCGG--------------- 681
consensus_8584#3      TCTG-------------------------------------------------------- 566
consensus_8584#0      GATTATTATTAACTAAACTAGCGCCAGCATTCAGCAACGTGGTTTTTTCTAATCGTTTCA 1499
consensus_8584#2      ------------------------------------------------------------
                                                                                  

consensus_8584#1      ----
consensus_8584#3      ----
consensus_8584#0      CCGG 1503
consensus_8584#2      ----