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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8602#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 893 fasta sequence
[GCGGAATTCCTCGAGAACTGTTGGCCTACTGGACACCGCACAAACAAAACGCAGC-AAAAACACCAAAACATCCGTCTGCAATCTCTCTCACCAAAAAACCCGGTCGGAAACATTAACATTCATAAATGGCACCGCCAAAAGTAAAACTGCACAAAAACACGGGCAAACTCAAGTACAGTCCACGGCCCGGCTCATTCCCCTCGCCAGCACCGCAACCATCCGCACCAGCAACCGGAAATGCACCCGCTGCCGCGGAACCATCCGAAGCCGATCGACAGTTTGAGCTCGAGCTGTATTGGTGCATCCAGCAGCTAGAATCACAGCTGCACCTTCCAAATGTCCGCGAAAACAACAAAAAGTTGGAAGAAACGTCCAAGCTAATAAACACCCTTAAAAGC-GGCACCCAACC-GATCATCCGCAAGCGGCAGATCATGCGTACCACGTTC-GGGGACTACCGGAGCCGGATGGCGGCCGAGGAGCAGACGAT-GGCCGTCAGCCCGGA-CAGTATTCGGTTCGAGGAGCCGAAGGAG--AAGGCCAAATACCATTTTGTGAAAAAGTCGGCCATTTTAAGCGGCGACAAGAACTTTAAATTTAACTTCCCGAAAAGTGACAGCAACGGTGAGACGGAAACGGTACCGGGGGCAGCG-CCGGTGGCCGTTGAGAAGGA-GGGGCCGGCGAAAGGGGAGAAAAAGGTAGCGGCGGCAGTTGCTCCGGCGAGTGTAATTGTTCCTTCGGATAATTCCTTCCGGTTTAACTTTGCTGTTGGTGGGGAATGAGTGCGTATCGTGGGGGAAGAGTTGGTTTTTGTACGTCGATAGCATTTAAATAAACGTAAGACAACGATGAAAAAAAAAAAAAAAAAAAAAAGGCCACATGTGCTCGAGCTGGGGGTC]
[-] EMBL CNS098XZ [GCGGAATTCCTCGAGAACTGTTGGCCTACTGGACACCGCACAAACAAAACGCAGCAAAAAACACCAAAACATCCCTCTGCAATTTTTCTCACCAAAAAACCCGGTCGGAAACACTTACATTCATTAATGGCACCGCCAAAAGTGAAACTACACAAAAAAACGGGCAAACTCAAGTACAGTCCACGGCCCGGCTCATTCCCCTCGCCAGCACCGCAACCATCCGCACCAGCAACCGGAAATGCACCCGCTGCAGCGGAACCATCCGAAGCCGATCGGCAGTTTGAGCTCGAGCTGTACTGGTGCATCCAGCAGCTGGAATAACAGCTGCACCTTCCAAATGTCCGCGAAAACAACAAAAAGTTGGAAGAAACGTCCAAGCTAATAAACACCCTTAAAAGCGGGCACCCAACCGGATCATCCGCAAGCGGCAGGTCATGCGTACCACGTTC GGGGACTACCGGAGCCGGATGGCGGCCGAGGAGCAGACGAT GGCCGTCAGCCCGGA CAGTATTCGGTTCGAGGAGCCGAAGGAG AAGGCCAAATACCATTTTGTGAAAAAGTCGGCCATTTTAAGCGGCGACAAGAACTTTAAATTTAACTTCCCGAAAAGTTACAGCAACGGTGAGACGGAAACGGTACCGGGGGCAGCG CCGGTGGCCGTTGAGAAGGA GGGGCCGGCGAAAGGGGAGAAAAAGGTAGCGGCGGCAGTTGCTCCGGCGAGTGTAATTGTT CTTCGGATAATTCCTTCCGGTTTAACTTTGCTGTTGGTGGGGAATGAGTGCGTATCGTGGGGGAAGAGTTGGTTTTTGTACGTCGATAGCATTTAAATAAACGTAAGACAACGATGAAAAAAAAAAAA ]
[+] EMBL CNS098XY [ CTGGACACCGCTCAAACAAAACGCAGCAAAAAACACCAAAACATCCGTCTGCAATCTCTCTCACCAAAAAACCCGGTCGGAAACACTAACATTCATAAATGGCACCGCCAAAAGTGAAACTACACAAAAACACGGGCAAACTCAAGTACAGTCCACGGCCCGGCTCATTCCCCTCGCCAGCACCGCAACCATCCGCACCAGCAACCGGAAATGCACCCGCTGCAGCGGAACCATCCGAAGCCGATCGGCAGTTTGAGCTCGAGCTGTACTGGTGCATCCAGCAGCTGGAATCACAGCTGCACCTTCCAAATGTCCGCGAAAACAACAAAAAGTTGGAAGAAACGTCCAAGCTAATAAACACCCTTAAAAGC GGCACCCAACC GATCATCCGCAAGCGGCAGATCATGCGTACCACGTTC GGGGACTACCGGAGCCGGATGGCGGCCGAGGAGCAGACGAT GGCCGTCAGCCCGGA CAGTATTCGGTTCGAGGAGCCGAA GAG AAGGCCAAATACCATTTTGTGAAAAAGTCGGCCATTTTAAGCGGCGACAAGAACTTTAAATTTAACTTCCCGAAAAGTGACAGCAACGGTGAGACGGAAACGGTACCGGGGGCAGCG CCGGTGGCCGTTGAGAAGGA GGGGCCGGCGAAAGGGGAGAAAAAGGTAGCGGCGGCAGTTGCTCCGGCGAGTGTAATTGTTCCTTCGGATAATTCCTTCCGGTTTAACTTTGCTGTTGGTGGGGAATGAGTGCGTATCGTGGGGGAAGAGTTGGTTTTTGTACGTCGATAGCATTTAAATAAACGTAAGACAACGATGAAAAAAAAAAAAAAAAAAAAAAGGCCACATGTGCTCGAGCTGGGGGTC]
[+] EMBL BM638367 [ ccgACCGCACAAACAAAACGCAGC AAAAACACCAAAACATCCGTCTGCAATCTCTCTCACCAAAAAACCCGGTCGGAAACATTAACATTCATAAATGGCACCGCCAAAAGTAAAACTGCACAAAAACACGGGCAAACTCAAGTACAGTCCACGGCCCGGCTCATTCCCCTCGCCAGCACCGCAACCATCCGCACCAGCAACCGGAAATGCACCCGCTGCCGCGGAACCATCCGAAGCCGATCGACAGTTTGAGCTCGAGCTGTATTGGTGCATCCAGCAGCTAGAATCACAGCTGCACCTTCCAAATGTCCGCGAAAACAACAAAAAGTTGGAAGAAACGTCCAAGCTAATAAATACCCTTAAAAGC GGCACCCAACC GATCATCCGCAAGCGGCAGATCATGCGTACCACGTTC GGGGACTACCGGAGCCGGATGGCGGCCGAGGAGCAGACGAT GGCCGTCAGCCCGGA CAGTATACGGTTCGAGGAGCCGAAGGAG AAGGCCAAATACCATTTTGTGAAAAAGTCGGCCATTTTAAGCGGCGATAAGAACTTTAAATTTAACTTCCCGAAAAGTGACAGCAACGGTGAGACGGAAACGGTATCGGGGGCAGCG CCGGTGGCCGTTGAGAAAGA GGGGCCG ]
[+] EMBL BM642673 [ ccgCAAAACGCAGC AAAAACACCAAAACATCCGTCTGCAATCTCTCTCACCAAAAAACCCGGTCGGAAACATTAACATTCATAAATGGCACCGCCAAAAGTAAAACTGCACAAAAACACGGGCAAACTCAAGTACAGTCCACGGCCCGGCTCATTCCCCTCGCCAGCACCGCAACCATCCGCACCAGCAACCGGAAATGCACCCGCTGCCGCGGAACCATCCGAAGCCGATCGACAGTTTGAGCTCGAGCTGTATTGGTGCATCCAGCAGCTAGAATCACAGCTGCACCTTCCAAATGTCCGCGAAAACAACAAAAAGTTGGAAGAAACGTCCAAGCTAATAAATACCCTTAAAAGC GGCACCCAACC GATCATCCGCAAGCGGCAGATCATGCGTACCACGTTC GGGGACTACCGGAGCCGGATGGCGGCCGAGGAGCAGACGAT GGCCGTCAGCCCGGA CAGTATACGGTTCGAGGAGCCGAAGGAG AAGGCCAAATACCATTTTGTGAAAAAGTCGGCCATTTTAAGCGGCGATAAGAACTTTAAATTTAACTTCCCGAAAAGTGACAGCAACGGTGAGACGGAAACGGTATCGGGGGCAGCG CCGGTGGCCGTTGAGAAGGA GGGGCCGGCGAAAGGGGAGAAAAAGGTAGCGGCGGTAGTTGCTCCGGCGAGTGTA ]
[+] EMBL BX628116 [ AACGCAGC AAAAACACCAAAACATCCGTCTGCAATCTCTCTCACCAAAAAACCCGGTCGGAAACATTAACATTCATAAATGGCACCGCCAAAAGTAAAACTGCACAAAAACACGGGCAAACTCAAGTACAGTCCACGGCCCGGCTCATTCCCCTCGCCAGCACCGCAACCATCCGCACCAGCAACCGGAAATGCACCCGCTGCCGCGGAACCATCCGAAGCCGATCGACAGTTTGAGCTCGAGCTGTATTGGTGCATCCAGCAGCTAGAATCACAGCTGCACCTTCCAAATGTCCGCGAAAACAACAAAAAGTTGGAAGAAACGTCCAAGCTAATAAATACCCTTAAAAGC GGCACCCAACC GATCATCCGCAAGCGGCAGATCATGCGTACCACGTTC GGGGACTACCGGAGCCGGATGGCGGCCGAGGAGCAGACGAT GGCCGTCAGCCCGGA CAGTATACGGTTCGAGGAGCCGAAGGAG AAGGCCAAATACCATTTTGTGAAAAAGTCGGCCATTTTAAGCGGCGATAAGAACTTTAAATTTAACTTCCCGAAAAGTGACAGCAACGGTGAGACGGAAACGGTATCGGGGGCAGCG CCGGTGGCCGTTGAGAANGA GGGGCCGGCGAAAGGGGAGAAAAAGGTAGCGGCGGTAGTTGCTCCGGCGAGTGTAATTGTTCCTTCGGATAATTCCTTC ]
[+] EMBL AL930430 [ gccgaggttAACGCAGC AAAACA CAAAACAT CGTCTGC ATCTCTCTCACCAAAAAACCCGGTCGGAAACATTAACATTCATAAATGGCACCGCCAAAAGTAAAACTGCACAAAAACACGGGCAAACTCAAGTACAGTCCACGGCCCGGCTCATTCCCCTCGCCAGCACCGCAACCATCCGCACCAGCAACCGGAAATGCACCCGCTGCCGCGGAACCATCCGAAGCCGATCGACAGTTTGAGCTCGAGCTGTATTGGTGCATCCAGCAGCTAGAATCACAGCTGCACCTTCCAAATGT CGCGAAAACAACAAAAAGTTGGAAGAAACGTCCAAGCTAATAAATACCCTTAAAAGC GGCA CCAACC GATCATCCGCAAGCGGCAGATCATGCGTACCACGTTC GGGGACTACCGGAGCCGGATGGCGGCCGAGGAGCAGACGATGGGCCGTCAG CCGGACCAGTATACGG TCGAGGAGCCGAAGGAGGAAAGGCCA ]
[+] EMBL CNS09O4Q [ AACACCAAAACATCCGTCTGCAATCTCTCTCACCAAAAAACCCGGTCGGAAACACTAACATTCATAAATGGCACCGCCAAAAGTGAAA TACACAAAAACACGGGCAAACTCAAGTACAGTCCACGGCCCGGCTCATTCCCCTCGCCAGCACCGCAACCATCCGCACCAGCAACCGGAAATGCACCCGCTGCAGC GAACCATCCGAAGCCGATCGGCAGTTTGAGCTCGAGCTGTACTGGTGCATCCAGCAGCTGGAATCACAGCTGCACCTTCCAAATGTCCGCGAAAACAACAAAAAGTTGGAAGAAACGTCCAAGCTAATAAACACCCTTAAAAGC GGCACCCAACC GATCATCCGCAAGCGGCAGATCATGCGTACCACGTTCGGGGGACTACCGGAGCCGGATGGCGGCCGAGGAGCAGACGAT GGCCGTCAGCCCGGA CAGTATTCGGTTCGAGGAGCCGAA GAG AAGGCCAAATACCATTTTGTGAAAAAGTCGGCCATTTTAAGCGGCGACAAGAACTTTAAATTTAACTTCCCGAAAAGTGACAGCAACGGTGAGACGGAAACGGTACCGGGGGCAGCG CCGGTGGCCGTTGAGAAGGAGGGGGCCG ]
[+] EMBL BX623642 [ CGGAAATGCACCCGCTGCCGCGGAACCATCCGAAGCCGATCGACAGTTTGAGCTCGAGCTGTATTGGTGCATCCAGCAGCTAGAATCACAGCTGCACCTTCCAAATGTCCGCGAAAACAACAAAAAGTTGGAAGAAACGTCCAAGCTAATAAATACCCTTAAAAGC GGCACCCAACC GATCATCCGCAAGCGGCAGATCATGCGTACCACGTTC GGGGACTACCGGAGCCGGATGGCGGCCGAGGAGCAGACGAT GGCCGTCAGCCCGGA CAGTATACGGTTCGAGGAGCCGAAGGAG AAGGCCAAATACCATTTTGTGAAAAAGTCGGCCATTTTAAGCGGCGATAAGAACTTTAAATTTAACTTCCCGAAAAGTGACAGCAACGGTGAGACGGAAACGGTATCGGGGGCAGCG CCGGTGGCCGTTGAGAAGGA GGGGCCGGCGAAAGGGGAGAAAAAGGTAGCGGCGGTAGTTGCTCCGGCGAGTGTAATTGTTCCTTCGGATAATTCCTTCCGGTTTAACTTTGCTGTTGGTGGGGAATGAGCGCTTATCGTGGGGGAAGAGTTGGTTTTTGTACGTTGATAGCATTTAAATAAACGTAAGA ]
[-] EMBL CNS09O4R [ GAACCATCCGAAGCCGATCGGCAGTTTGAGCTCGAGCTGTACTGGTGCATCCAGCAGCTGGAATTACAGCTGCACCTTCCAAATGTCCGCGAAAACAACAAAAAGTTGGAAGAAACGTCCAAGCTAATAAACACCCTTAAAAGC GGCACCCAACC GATCATCCGCAAGCGGCAGGTCATGCGTACCACGTTC GGGGACTACCGGAGCCGGATGGCGGCCGAGGAGCAGACGAT GGCCGTCAGCCCGGA CAGTATTCGGTTCGAGGAGCCGAAGGAG AAGGCCAAATACCATTTTGTGAAAAAGTCGGCCATTTTAAGCGGCGACAAGAACTTTAAATTTAACTTCCCGAAAAGTTACAGCAACGGTGAGACGGAAACGGTACCGGGGGCAGCG CCGGTGGCCGTTGAGAAGGA GGGGCCGGCGAAAGGGGAGAAAAAGGTAGCGGCGGCAGTTGCTCCGGCGAGTGTAATTGTT CTTCGGATAATTCCTTCCGGTTTAACTTTGCTTTTGGTGGGGAATGAGTGCGTTTCGTGGGGGAAGAGTTGGTTTTTGTACGTCGATAGCATTTAAATAA ]
[+] EMBL CNS08RRP [ AAACGTCCAAGCTAATAAACACCCTTAAAAGC GGCACCCAACC GATCATCCGCAAGCGGCAGATCATGCGTACCACGTTC GGGGACTACCGGAGCCGGATGGCGGCCGAGGAGCAGACGAT GGCCGTCAGCCCGGA CAGTATTCGGTTCGAGGAGCCGAA GAG AAGGCCAAATACCATTTTGTGAAAAAGTCGGCCATTTTAAGCGGCGACAAGAACTTTAAATTTAACTTCCCGAAAAGTGACAGCAACGGTGAGACGGAAACGGTACCGGGGGCAGCGCCCGGTGGCCGTTGAGAAGGA GGGGCCGGCGAAAGGGGAGAAAAAGGTAGCGGCGGCAGTTGCTCCGGCGAGTGTAATTGTTCCTTCGGATAATTCCTTCCGGTTTAACTTTGCTGTTGGTGGGGAATGAGTGCGTATCGTGGGGGAAGAGTTGGTTTTTGTACGTCGATAGCATTTAAATAAACGTAAGACAACGATG AAAAAAAAAAAAAAAAAGGCCACAT TGCCCG ]
consensusID : consensus_8602#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 492 fasta sequence
[TGGCCTACTGGAAAACAACAAAAAGTTGGAAGAAACGTCCAAGCTAATAAACACCCTTAAAAGCCGGCACCCAACCGATCATCCGCAAGCGGCAGGTCATGCGTACCACGTTCGGGGACTACCGGAGCCGGATGGCGGCCGAGGAGCAGACGATGGCCGTCAGCCCGGACAGTATTCGGTTCGAGGAGCCGAAGGAGAAGGCCAAATACCATTTTGTGAAAAAGTCGGCCATTTTAAGCGGCGACAAGAACTTTAAATTTAACTTCCCGAAAAGTTACAGCAACGGTGAGACGGAAACGGTACCGGGGGCAGCGCCGGTGGCCGTTGAGAAGGAGGGGCCGGCGAAAGGGGAGAAAAAGGTAGCGGCGGGAGTTGCTCCCGGGCGAGTGTAATTGTTCTTCGGATAATTCCTTCCGGTTTAACTTTGCTGTTGGTGGGGAATGAGTGCGTATCGTGGGGGAAGAGTTGGTTTTTGTACGTCGATAGCATTTA]
[-] EMBL CNS08RRQ [TGGCCTACTGGAAAACAACAAAAAGTTGGAAGAAACGTCCAAGCTAATAAACACCCTTAAAAGCCGGCACCCAACCGATCATCCGCAAGCGGCAGGTCATGCGTACCACGTTCGGGGACTACCGGAGCCGGATGGCGGCCGAGGAGCAGACGATGGCCGTCAGCCCGGACAGTATTCGGTTCGAGGAGCCGAAGGAGAAGGCCAAATACCATTTTGTGAAAAAGTCGGCCATTTTAAGCGGCGACAAGAACTTTAAATTTAACTTCCCGAAAAGTTACAGCAACGGTGAGACGGAAACGGTACCGGGGGCAGCGCCGGTGGCCGTTGAGAAGGAGGGGCCGGCGAAAGGGGAGAAAAAGGTAGCGGCGGGAGTTGCTCCCGGGCGAGTGTAATTGTTCTTCGGATAATTCCTTCCGGTTTAACTTTGCTGTTGGTGGGGAATGAGTGCGTATCGTGGGGGAAGAGTTGGTTTTTGTACGTCGATAGCATTTA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_8602#0 GCGGAATTCCTCGAGAACTGTTGGCCTACTGGACACCGCACAAACAAAACGCAGCAAAAA 60
consensus_8602#1 ------------------------------------------------------------
consensus_8602#0 CACCAAAACATCCGTCTGCAATCTCTCTCACCAAAAAACCCGGTCGGAAACATTAACATT 120
consensus_8602#1 ------------------------------------------------------------
consensus_8602#0 CATAAATGGCACCGCCAAAAGTAAAACTGCACAAAAACACGGGCAAACTCAAGTACAGTC 180
consensus_8602#1 ------------------------------------------------------------
consensus_8602#0 CACGGCCCGGCTCATTCCCCTCGCCAGCACCGCAACCATCCGCACCAGCAACCGGAAATG 240
consensus_8602#1 ------------------------------------------------------------
consensus_8602#0 CACCCGCTGCCGCGGAACCATCCGAAGCCGATCGACAGTTTGAGCTCGAGCTGTATTGGT 300
consensus_8602#1 ------------------------------------------------------------
consensus_8602#0 GCATCCAGCAGCTAGAATCACAGCTGCACCTTCCAAATGTCCGCGAAAACAACAAAAAGT 360
consensus_8602#1 ----------------------------------TGGCCTACTGGAAAACAACAAAAAGT 26
* * ****************
consensus_8602#0 TGGAAGAAACGTCCAAGCTAATAAACACCCTTAAAAGC-GGCACCCAACCGATCATCCGC 419
consensus_8602#1 TGGAAGAAACGTCCAAGCTAATAAACACCCTTAAAAGCCGGCACCCAACCGATCATCCGC 86
************************************** *********************
consensus_8602#0 AAGCGGCAGATCATGCGTACCACGTTCGGGGACTACCGGAGCCGGATGGCGGCCGAGGAG 479
consensus_8602#1 AAGCGGCAGGTCATGCGTACCACGTTCGGGGACTACCGGAGCCGGATGGCGGCCGAGGAG 146
********* **************************************************
consensus_8602#0 CAGACGATGGCCGTCAGCCCGGACAGTATTCGGTTCGAGGAGCCGAAGGAGAAGGCCAAA 539
consensus_8602#1 CAGACGATGGCCGTCAGCCCGGACAGTATTCGGTTCGAGGAGCCGAAGGAGAAGGCCAAA 206
************************************************************
consensus_8602#0 TACCATTTTGTGAAAAAGTCGGCCATTTTAAGCGGCGACAAGAACTTTAAATTTAACTTC 599
consensus_8602#1 TACCATTTTGTGAAAAAGTCGGCCATTTTAAGCGGCGACAAGAACTTTAAATTTAACTTC 266
************************************************************
consensus_8602#0 CCGAAAAGTGACAGCAACGGTGAGACGGAAACGGTACCGGGGGCAGCGCCGGTGGCCGTT 659
consensus_8602#1 CCGAAAAGTTACAGCAACGGTGAGACGGAAACGGTACCGGGGGCAGCGCCGGTGGCCGTT 326
********* **************************************************
consensus_8602#0 GAGAAGGAGGGGCCGGCGAAAGGGGAGAAAAAGGTAGCGGCGGCAGTTGCTCC--GGCGA 717
consensus_8602#1 GAGAAGGAGGGGCCGGCGAAAGGGGAGAAAAAGGTAGCGGCGGGAGTTGCTCCCGGGCGA 386
******************************************* ********* *****
consensus_8602#0 GTGTAATTGTTCCTTCGGATAATTCCTTCCGGTTTAACTTTGCTGTTGGTGGGGAATGAG 777
consensus_8602#1 GTGTAATTGTTC-TTCGGATAATTCCTTCCGGTTTAACTTTGCTGTTGGTGGGGAATGAG 445
************ ***********************************************
consensus_8602#0 TGCGTATCGTGGGGGAAGAGTTGGTTTTTGTACGTCGATAGCATTTAAATAAACGTAAGA 837
consensus_8602#1 TGCGTATCGTGGGGGAAGAGTTGGTTTTTGTACGTCGATAGCATTTA------------- 492
***********************************************
consensus_8602#0 CAACGATGAAAAAAAAAAAAAAAAAAAAAAGGCCACATGTGCTCGAGCTGGGGGTC 893
consensus_8602#1 --------------------------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||