cluster # 8603

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Anopheles gambiae
cluster # 8603 cluster # 8603 Sequences # 11 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8603#0 length = 1027 sequences # 9

consensus_8603#1 length = 816 sequences # 1
consensus_8603#2 length = 562 sequences # 1

consensusID : consensus_8603#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 1027
fasta sequence

                              [GCTGCGGAATTCCTCGAGCACTGTTGGCCTACTGGATAATATCGTGTGCAGGCCGCATGCATCGTTGCGTTCTCGTAGA-AAA-AGAGTCCACTAAAATATACCTTTATTTCTACAAGTGTAAAATCGTACCGTCGTAGCAAGAGGGGAAACAGCTGCACATCAAACCTAAAGGACTTTCCCTCGTAGCAGCGTATATTTGCTCACTTTTCCCATCTCACAATGCAGGATCCTAACGAAGATACCGAGTGGAATGATTTCTTGCGAGCAAAGGGCATCATACCGCAGAAGCCCAAGGAGAAAGAAATCACCGAAGATGAAATCATTGGCATGATCGAAAGCACCATCGCGGAGAAGCAGAATGGAAAAGACTTGTCGAAGCTCGATCTCGATGAGCTAGATGAGTTGGAGGACTCGGAGGACGAGGCGGTACTGCAGCAGTATCGGCAGAAACGCATCGCGG-AAATGCAAGCGGCCGCCAGCAGGGCACGATTCGGCACGGTGCGGGAAATTTCGGGCCAGGACTACGTTGAGGAAGTGACGAAGGCGGGAGAAGGCATCTATGTTGTGCTGCACCTGTACAGCCGTGGTGTCCCGTTCTGTGCGCTCATTAACCAACATTTGACACAGCTGGCCGCGGCTTTTCCGATGACGAAGTTTGTACGTGCAATCGCCACCACGTGCATTGCCAACTATCCGGAACGAAATGTGCCGACCATCTTCGTGTACTACGAGGGCCAGCTGAAGAAACAGTTCATTGGAGCCGTCGAGCTTGGTGGACCTAATCTAACGTGCGACGAGCTGGAGTATATGCTCGGACAGGCCAAAGCAATTGAGAGTAATATCAAGGAGGACCCACGGGAGTCGAAAAAGATCAAAGACAAACTGTTTGCGGAACTATCGGACAACAATGATTGGTAGGAGGAGACCACGCGTCTTGTAAGATGTCGGCATTTTTCTACAAAA-TTTAATAAAAACGTCTGCTATTTAAAAAAAAAAAAAAAAAAAACAAAAAGGCCACAGGTGCTCG]

[-] EMBL CNS09RP7             [GCTGCGGAATTCCTCGAGCACTGTTGGCCTACTGGATAATATCGTGTGCAGGCCGCATGCATCGTTGCGTTCTCGTAGAGAAA AGAGTCCACTAAAATATACCTTTATTTCTACAAGTGTAAAATCGTACCGTCGTAGCAAGAGGGGAAACAGCTGCACATCAAACCTAAAGGACTTTCCCTCGTAGCAGCGTATATTTGCTCACTTTTCCCTTCTCACAATGCAGGATCCTAACGAAGATACCGAGTGGAATGATTTCTTGCGAGCAAAGGGCATCATACCGCAGAAGCCCAAGGAGAAAGAAATCACCGAAGATGAAATCATTGGCATGATCGAAAGCACCATCGCGGAGAAGCAGAATGGAAAAGACTTGTCGAAGCTCGATCTCGATGAGCTAGATGAGTTGGAGGACTCGGAGGACGAGGCGGTACTGCAGCAGTATCGGCAGAAACGCATCGCGG AAATGCAAGCGGCCGCCAGCAGGGCACGATTCGGCACGGTGCGGGAAATTTCGGGCCAGGACTACGTTGAGGAAGTGACGAAGGCGGGAGAAGGCATCTATGTTGTGCTGCACCTGTACAGCCGTGGTGTCCCGTTCTGTGCGCTCATTAACCAACATTTGACACAGCTGGCCGCGGCTTTTCCGATGACGAAGTTTGTACGTGCAATCGCCACCACGTGCATTGCCAACTATCCGGAACGAAATGTGCCGACCATCTTCGTGTACTACGAGGGCCAGCTGAAGAAACAGTTCATTGGAGCCGTCGAGCTTGGTGGACCTAATCTAACGTGCGACGAGCTGGAGTATATGCTCGGACAGGCCAAAGCAATTGAGAGTAATATCAAGGAGGACCCACGGGAGTCGAAAAAGATCAAAGACAAACTGTTTGCGGAACTATCGGACAACAATGATTGGTAGGAGGAGACCACGCGTCTTGTAAGATGTCGGCATTTTTCTACAAAA TTTAATAAAAACGT                                                  ]
[+] EMBL CNS09E6R             [                                TGGGTAATATAGTGTGCAGGCCGCATGCATCGTTGCGTTCTCGTAGA AAA AGAGTCCACTAAAATATACCTTTATTTCTACAAGTGTAAAATCGTACCGTCGTAGCAAGAGGGGAAACAGCTGCACATCAAACCTAAAGGACTTTCCCTCGTAGCAGCGTATATTTGCTCACTTTTCCCATCTCACAATGCAGGATCCTAACGAAGATACCGAGTGGAATGATATCTTGCGAGCAAAGGGCATCATACCGCAGAAGCCCAAGGAGAAAGAAATCACCGAAGATGAAATCATTGGCATGATCGAAAGCACCATCGCGGAGAAGCAGAATGGAAAAGACTTGTCGAAGCTCGATCTCGATGAGCTAGATGAGTTGGAGGACTCGGAGGACGAGGCGGTACTGCAGCAGTATCGGCAGAAACGCATCGCGG AAATGCAAGCGGCCGCCAGCAGGGCACGATTCGGCACGGTGCGGGAAATTTCGGGCCAGGACTACGTTGAGGAAGTGACGAAGGCGGGAGAAGGCATCTACGTTGTGCTGCACCTGTACAGCCGTGGTGTCCCGTTCTGTGCGCTCATTAACCAACATTTGACACAGCTGGCCGCGGCTTTTCCGATGACGAAGTTTGTACGTGCAATCGCCACCACGTGCATTGCCAACTATCCGGAACGAAATGTGCCGACCATCTTCGTGTACTACGAGGGCCAGCTGAAGAAACAGTTCATTGGAGCCGTCGAGCTTGGTGGACCTAATCTAACGTGCGACGAGCTGGAGTATATGCTCGGACAGGCCAAAGCAATTGAGAGTAATATCAAGGAGGACCCACGGGAGTCGAAAAAGATCAAAGACAAACTGTTTGCGGAACTATCGGACAACAATGATTGGTAGGAGGAGACCACGCGTCTTGTAAGATGTCGG                                                                                ]
[+] EMBL CNS09PMX             [                                    TAATATCGTGTGCAGGCCGCATGCATCGTTGCGTTCTCGTAGA AAA AGAGTCCACTAAAATATACCTTTATTTCTACAAGTGTAAAATCGTACCGTCGTAGCAAGAGGGGAAACAGCTGCACATCAAACCTAAAGGACTTTCCCTCGTAGCAGCGTATATTTGCTCACTTTTCCCATCTCACAATGCAGGATCCTAACGAAGATACCGAGTGGAATGATATCTTGCGAGCAAAGGGCATCATACCGCAGAAGCCCAAGGAGAAAGAAATCACCGAAGATGAAATCATTGGCATGATCGAAAGCACCATCGCGGAGAAGCAGAATGGAAAAGACTTGTCGAAGCTCGACCTCGATGAGCTAGATGAGTTGGAGGACTCGGAGGACGAGGCGGTACTGCAGCAGTATCGGCAGAAACGCATCGCGG AAATGCAAGCGGCCGCCAGCAGGGCACGATTCGGCACGGTGCGGGAAATTTCGGGCCAGGACTACGTTGAGGAAGTGACGAAGGCGGGAGAAGGCATCTACGTTGTGCTGCACCTGTACAGCCGTGGTGTCCCGTTCTGTGCGCTCATTAACCAACATTTGACACAGCTGGCCGCGGCTTTTCCGATGACGAAGTTTGTACGTGCAATCGCCACCACGTGCATTGCCAACTATCCGGAACGAAATGTGCCGACCATCTTCGTGTACTACGAGGGCCAGCTGAAGAAACAGTTCATTGGAGCCGTCGAGCTTGGTGGACCTAATCTAACGTGCGACGAGCTGGAGTATATGCTCGGACAGGCCAAAGCAATTGAGAGTAATATCAAGGAGGACCCACGGGAGTGGAAAAAGATCAAAGACAAACTGTTTGCGGAACTATCGGACAACAATGATTGGTAGGAGGAGACCACGCGTCTTGTAAGATGTCGGCATTTTTCTACAAAA TTTAATAAAAACGTCTGCTATTTAAAAAAAAAAAAAAAAAAAACAAAAAGGCCACAGGT     ]
[+] EMBL CNS09RP6             [                                                  GGCCGCATGCATCGTTGCGTTCTCGTAGA AAA AGAGTCCACTAAAATATACCTTTATTTCTACAAGTGTAAAATCGTACCGTCGTAGCAAGAGGGGAAACAGCTGCACATCAAACCTAAAGGACTTTCCCTCGTAGCAGCGTATATTTGCTCACTTTTCCCATCTCACAATGCAGGATCCTAACGAAGATACCGAGTGGAATGATATCTTGCGAGCAAAGGGCATCATACCGCAGAAGCCCAAGGAGAAAGAAATCACCGAAGATGAAATCATTGGCATGATCGAAAGCACCATCGCGGAGAAGCAGAATGGAAAAGACTTGTCGAAGCTCGATCTCGATGAGCTAGATGAGTTGGAGGACTCGGAGGACGAGGCGGTACTGCAGCAGTATCGGCAGAAACGCATCGCGG AAATGCAAGCGGCCGCCAGCAGGGCACGATTCGGCACGGTGCGGGAAATTTCGGGCCAGGACTACGTTGAGGAAGTGACGAAGGCGGGAGAAGGCATCTATGTTGTGCTGCACCTGTACAGCCGTGGTGTCCCGTTCTGTGCGCTCATTAACCAACATTTGACACAGCTGGCCGCGGCTTTTCCGATGACGAAGTTTGTACGTGCAATCGCCACCACGTGCATTGCCAACTATCCGGAACGAAATGTGCCGACCATCTTCGTGTACTACGAGGGCCAGCTGAAGAAACAGTTCATTGGAGCCGTCGAGCTTGGTGGACCTAATCTAACGTGCGACGAGCTGGAGTATATGCTCGGACAGGCCAAAGCAATTGAGAGTAATATCAAGGAGGACCCACGGGAGTCGAAAAAGATCAAAGACAAACTGTTTGCGGAACTATCGGACAACAATGATTGGTAGGAGGAGACCACGCGTCTTGTAAGATGTCGGCATTTTTCTACAAAA TTTAATAAAAACGTCTGCTATTT AAAAAAAAAAAAAAAAAAACAAAAAGGCCACATGTGCTCG]
[+] EMBL CNS09RR9             [                                                      GCATGCATCGTTGCGTTCTCGTAGA AAAGAGAGTCCACTAAAATATACCTTTATTTCTACAAGTGTAAAATCGTACCGTCGTAGCAAGAGGGGAAACAGCTGCACATCAAACCTAAAGGACTTTCCCTCGTAGCAGCGTATATTTGCTCACTTTTCCCATCTCACAATGCAGGATCCTAACGAAGATACCGAGTGGAATGATATCTTGCGAGCAAAGGGCATCATACCGCAGAAGCCCAAGGAGAAAGAAATCACCGAAGATGAAATCATTGGCATGATCGAAAGCACCATCGCGGAGAAGCAGAATGGAAAAGACTTGTCGAAGCTCGATCTCGATGAGCTAGATGAGTTGGAGGACTCGGAGGACGAGGCGAAACTGCAGCAGTATCGGCAGAAACGCATCGCGGAAAATGCAAGCGGCCGCCAGCAGGGCACGATTCGGCACGGTGCGGGAAATTTCGGGCCAGGACTACGTTGAGGAAGTGACGAAGGCGGGAGAAGGCATCTATGTTGTGCTGCACCTGTACAGCCGTGGTGTCCCGTTCTGTGCGCTCATTAACCAACATTTGACACAGCTGGCCGCGGCTTTTCCGATGACGAAGTTTGTACGTGCAATCGCCACCACGTGCATTGCCAACTATCCGGAACGAAATGTGCCGACCATCTTCGTGTACTACGAGGGCCAGCTGAAGAAACAGTTCATTGGAGCCGTCGAGCTTGGTGGACCTAATCTAACGTGCGACGAGCTGGAGTATATGCTCGGACAGGCCAAAGCAATTGAGAGTAATATCAAGGAGGACCCACGGGAGTCGAAAAAGATCAAAGACAAACTGTTTGCGGAACTATCGGACAACAATGA                                                                                                                     ]
[+] EMBL AL931598             [                                                           gcTCGTTGCGTTCTCGTAGAGAAA AGAGT CACTAAAATATACCTTTATTTCTACAAGTGTAAAATCGTACCGTCGTAGCAAGAGGGGAAACAGCTGCACATCAAACCTAAAGGACTTTCCCTCATAGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CNS09PMY             [                                                                                 AA AGAGTCCACTAAAATATACCTTTATTTCTACAAGTGTAAAATCGTACCGTCGTAGCAAGAGGGGAAACAGCTGAACATCAAACCTAAAGGACTTTCCCTCGTAGCAGCGTATATTTGCTCACTTTTCCCCTCTCACAATGCAGGATCCTAACGAAGATACCCAGTGGAATGATTTCTTGCGAGCAAAGGGCATCATACCGCAGAAGCCCAAGGAGAAAGAAATCACCGAAGATGAAATAATTGGCATGATCGAAAGCACCATCGCGGAGAAGCAGAATGGAAAAGACTTGTCGAAGCTCGACCTCGATGAGCTAGATGAGTTGGAGAACTCGGAGGACGAGGCGGAACTGCAGCAGTATCGGCAGAAACGCATCGCGG AAATGCAAGCGGCCGCCAGCAGGGCACGATTCGGCACGGTGCGGGAAATTTCGGGCCAGAACTACGTTGAGGAAGTGACGAAGGCGGGAGAAGGCATCTACGTTGTGCTGCACCTGAACAGCCGTGTTGTCCCGTTCTGTGCGCTCATTAACCAACATTTGAAACAGCTGGCCGCGGCTTTTCCGATGACGAAGTTTGTACGTGCAATCGCCACCACGTGCATTGCCAACTATCCGGAACGAAATGTGCCGACCATCTTCGTGTACTACGAGGGCCAGCTGAAGAAACAGTTCATTGGAGCCGTCGAGCTTGGTGGACCTAATCTCACGTGCGACGGGCTGGAGTATATGCTCGGACAGGCCAAAGCAATTGAGAGTAATATCAAGGAGGACCCACGGGAGTCGAAAAAGATCAAAGACAAACTGTTTGCGGGACTATCGGACAACAATGATTGGTAGGAGGAGACCACGCGTCTTGTAAGATGTCGGCATTTTTCTACAAAA TTTAATAAAAACCTCTGCTATTTAAAAAAAAAAAA                             ]
[-] EMBL CNS09E6S             [                                                                                       GTCCACTAAAATATACCTTTATTTCTACAAGTGTAAAATCGTACCGTCGTAGCAAGAGGGGAAACAGCTGCACATCAAACCTAAAGGACTTTCCCTCGTAGCAGCGTATATTTGCTCACTTTTCCCCTCTCACAATGCAGGATCCTAACGAAGATACCGAGTGGAATGATTTCTTGCGAGCAAAGGGCATCATACCGCAGAAGCCCAAGGAGAAAGAAATCACCGAAGATGAAATCATTGGCATGATCGAAAGCACCATCGCGGAGAAGCAGAATGGAAAAGACTTGTCGAAGCTCGATCTCGATGAGCTAGATGAGTTGGAGGACTCGGAGGACGAGGCGGTACTGCAGCAGTATCGGCAGAAACGCATCGCGG AAATGCAAGCGGCCGCCAGCAGGGCACGATTCGGCACGGTGCGGGAAATTTCGGGCCAGGACTACGTTGAGGAAGTGACGAAGGCGGGAGAAGGCATCTACGTTGTGCTGCACCTGTACAGCCGTGGTGTCCCGTTCTGTGCGCTCATTAACCAACATTTGACACAGCTGGCCGCGGCTTTTCCGATGACGAAGTTTGTACGTGCAATCGCCACCACGTGCATTGCCAACTATCCGGAACGAAATGTGCCGACCATCTTCGTGTACTACGAGGGCCAGCTGAAGAAACAGTTCATTGGAGCCGTCGAGCTTGGTGGACCTAATCTAACGTGCGACGAGCTGGAGTATATGCTCGGACAGGCCAAAGCAATTGAGAGTAATATCAAGGAGGACCCACGGGAGTCGAAAAAGATCAAAGACAAACTGTTTGCGGAACTATCGGACAACAATGATTGGTAGGAGGAGACCACGCGTCTTGTAAGATGTCGGCATTTTTCTACAAAAGTTTAATAAAAACGTCTGCTATTTTAAAAA                                   ]
[-] EMBL CNS09RRA             [                                                                                            CTAAAATATACCTTTATTTCTACAAGTGTAAAATCGTACCGTCGTAGCAAGAGGGGAAACAGCTGCACATCAAACCTAAAGGACTTTCCCTCGTAGCAGCGTATATTTGCTCACTTTTCCCATCTCACAATGCAGGATCCTAACGAAGATACCGAGTGGAATGATTTCTTGCGAGCAAAGGGCATCATACCGCAGAAGCCCAAGGAGAAAGAAATCACCGAAGATGAAATAATTGGCATGATCGAAAGCACCATCGCGGAGAAGCAGAATGGAAAAGACTTGTCGAAGCTCGATCTCGATGAGCTAGATGAGTTGGAGGACTCGGAGGACGAGGCGGTACTGCAGCAGTATCGGCAGAAACGCATCGCGG AAATGCAAGCGGCCGCCAGCAGGGCACGATTCGGCACGGTGCGGGAAATTTCGGGCCAGGACTACGTTGAGGAAGTGACGAAGGCGGGAGAAGGCATCTATGTTGTGCTGCACCTGTACAGCCGTGGTGTCCCGTTCTGTGTTGTCATTAACCAACATTTGACACAGCTGGCCGCGGCTTTTCCGATGACGAAGTTTGTACGTGCAATCGCCACCACGTGCATTGCCAACTATCCGGAACGAAATGTGCCGACCATCTTCGTGTACTACGAGGGCCAGCTGAAGAAACAGTTCATTGGAGCCGTCGAGCTTGGTGGACCTAATCTAACGTGCGACGAGCTGGAGTATATGCTCGGACAGGCCAAAGCAATTGAGAGTAATATCAAGGAGGACCCACGGGAGTCGAAAAAGATCAAAGACAAACTGTTTGCGGAACTATCGGACAACAATGATTGGTAGGAGGAGACCACGCGTCTTGTAAGATGTCGGCATTTTTCTACAAAA TTTAATAAAAAGGTgttgtgtt                                          ]




>consensus_8603#0
GCTGCGGAATTCCTCGAGCACTGTTGGCCTACTGGATAATATCGTGTGCAGGCCGCATGC
ATCGTTGCGTTCTCGTAGAAAAAGAGTCCACTAAAATATACCTTTATTTCTACAAGTGTA
AAATCGTACCGTCGTAGCAAGAGGGGAAACAGCTGCACATCAAACCTAAAGGACTTTCCC
TCGTAGCAGCGTATATTTGCTCACTTTTCCCATCTCACAATGCAGGATCCTAACGAAGAT
ACCGAGTGGAATGATTTCTTGCGAGCAAAGGGCATCATACCGCAGAAGCCCAAGGAGAAA
GAAATCACCGAAGATGAAATCATTGGCATGATCGAAAGCACCATCGCGGAGAAGCAGAAT
GGAAAAGACTTGTCGAAGCTCGATCTCGATGAGCTAGATGAGTTGGAGGACTCGGAGGAC
GAGGCGGTACTGCAGCAGTATCGGCAGAAACGCATCGCGGAAATGCAAGCGGCCGCCAGC
AGGGCACGATTCGGCACGGTGCGGGAAATTTCGGGCCAGGACTACGTTGAGGAAGTGACG
AAGGCGGGAGAAGGCATCTATGTTGTGCTGCACCTGTACAGCCGTGGTGTCCCGTTCTGT
GCGCTCATTAACCAACATTTGACACAGCTGGCCGCGGCTTTTCCGATGACGAAGTTTGTA
CGTGCAATCGCCACCACGTGCATTGCCAACTATCCGGAACGAAATGTGCCGACCATCTTC
GTGTACTACGAGGGCCAGCTGAAGAAACAGTTCATTGGAGCCGTCGAGCTTGGTGGACCT
AATCTAACGTGCGACGAGCTGGAGTATATGCTCGGACAGGCCAAAGCAATTGAGAGTAAT
ATCAAGGAGGACCCACGGGAGTCGAAAAAGATCAAAGACAAACTGTTTGCGGAACTATCG
GACAACAATGATTGGTAGGAGGAGACCACGCGTCTTGTAAGATGTCGGCATTTTTCTACA
AAATTTAATAAAAACGTCTGCTATTTAAAAAAAAAAAAAAAAAAAACAAAAAGGCCACAG
GTGCTCG

consensusID : consensus_8603#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 816
fasta sequence

                              [CGATGCCAANGCAGAATTCCGNGGTTAATACGTCGTAGCAAGAGGGCGAAACAGCTGCACATNTAAACCTAAAGGACTTTCCCTCATAGCAGTGTATATTTGCTCACTTTTCCCATACTCACAATGCAGGATCCTAACGAAGATACCGAGTGGAATGATATCTTGCGAGCAAATGGGCATCATACCGAGAAGCCCAAGGAGAAAGAAATCCACCGACAGATGCAAATCATATGGCATGATCGAAAGCACCATCGCGGGAGAANAGCAGANNTGGAAACAGACTTGTCGAAGCTCGATCTCGATGAGCTAGATGNGNTTGGAGNGACTACCGGAGGANCGANGGCCGGGTACTGCAGCACGNAATACGGGCACGGCAAAACGCCATTCTGCGGAAAATNGCCANACGCNGNGCCCTGCCAAGCCACGGGCACCGAATTCCAGGGCAACCGGGNTGCGGGANAACTTATAACCGGGGNCCCACGGACACTAACGTTATGACGGAAGTTGAACGANACATGGCGGTGTGACAGCAAACGNNGCCTTTNTAAAACCGGTTAATTGGGTATGGNCTTNNGGCCGACACCCTTAGGTACAATAGCCGGTTGGAGTTAGTTACACCCCGTATCTCTNGNTNGCGTCGGCTCCAATATNAAAAGCGCCACAAGANTATATTGAGGGANACACANCACGNGAGTTTGGGCGCCCNGCGAGGANTCNTATCGACCCAGGATATAGAACACGAAACGGTTATTAGGTGACNCNTTACGCGCACCATACAGGCCAACANACCAACCGTTGCATTCTGGCGCCACACAT]

[+] EMBL AL695106             [CGATGCCAANGCAGAATTCCGNGGTTAATACGTCGTAGCAAGAGGGCGAAACAGCTGCACATNTAAACCTAAAGGACTTTCCCTCATAGCAGTGTATATTTGCTCACTTTTCCCATACTCACAATGCAGGATCCTAACGAAGATACCGAGTGGAATGATATCTTGCGAGCAAATGGGCATCATACCGAGAAGCCCAAGGAGAAAGAAATCCACCGACAGATGCAAATCATATGGCATGATCGAAAGCACCATCGCGGGAGAANAGCAGANNTGGAAACAGACTTGTCGAAGCTCGATCTCGATGAGCTAGATGNGNTTGGAGNGACTACCGGAGGANCGANGGCCGGGTACTGCAGCACGNAATACGGGCACGGCAAAACGCCATTCTGCGGAAAATNGCCANACGCNGNGCCCTGCCAAGCCACGGGCACCGAATTCCAGGGCAACCGGGNTGCGGGANAACTTATAACCGGGGNCCCACGGACACTAACGTTATGACGGAAGTTGAACGANACATGGCGGTGTGACAGCAAACGNNGCCTTTNTAAAACCGGTTAATTGGGTATGGNCTTNNGGCCGACACCCTTAGGTACAATAGCCGGTTGGAGTTAGTTACACCCCGTATCTCTNGNTNGCGTCGGCTCCAATATNAAAAGCGCCACAAGANTATATTGAGGGANACACANCACGNGAGTTTGGGCGCCCNGCGAGGANTCNTATCGACCCAGGATATAGAACACGAAACGGTTATTAGGTGACNCNTTACGCGCACCATACAGGCCAACANACCAACCGTTGCATTCTGGCGCCACACAT]




>consensus_8603#1
CGATGCCAANGCAGAATTCCGNGGTTAATACGTCGTAGCAAGAGGGCGAAACAGCTGCAC
ATNTAAACCTAAAGGACTTTCCCTCATAGCAGTGTATATTTGCTCACTTTTCCCATACTC
ACAATGCAGGATCCTAACGAAGATACCGAGTGGAATGATATCTTGCGAGCAAATGGGCAT
CATACCGAGAAGCCCAAGGAGAAAGAAATCCACCGACAGATGCAAATCATATGGCATGAT
CGAAAGCACCATCGCGGGAGAANAGCAGANNTGGAAACAGACTTGTCGAAGCTCGATCTC
GATGAGCTAGATGNGNTTGGAGNGACTACCGGAGGANCGANGGCCGGGTACTGCAGCACG
NAATACGGGCACGGCAAAACGCCATTCTGCGGAAAATNGCCANACGCNGNGCCCTGCCAA
GCCACGGGCACCGAATTCCAGGGCAACCGGGNTGCGGGANAACTTATAACCGGGGNCCCA
CGGACACTAACGTTATGACGGAAGTTGAACGANACATGGCGGTGTGACAGCAAACGNNGC
CTTTNTAAAACCGGTTAATTGGGTATGGNCTTNNGGCCGACACCCTTAGGTACAATAGCC
GGTTGGAGTTAGTTACACCCCGTATCTCTNGNTNGCGTCGGCTCCAATATNAAAAGCGCC
ACAAGANTATATTGAGGGANACACANCACGNGAGTTTGGGCGCCCNGCGAGGANTCNTAT
CGACCCAGGATATAGAACACGAAACGGTTATTAGGTGACNCNTTACGCGCACCATACAGG
CCAACANACCAACCGTTGCATTCTGGCGCCACACAT

consensusID : consensus_8603#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 562
fasta sequence

                              [GCCCAGGACTTATGGCATCGGTATGTTAAGCNTTTGATTTCTGTATGTATTTTTTCATGTTTGTGAATCAAATAATTGCTTAGAGCAAGCAACAAGAATCGATTGTAAAATCGTACCGTCGTAGCAAGAGGGGAAACAGCTGCACATCAAACCTAAAGGACTTTCCCTCATAGCAGCGTATATTTGCTCACTTTTCCCATCTCACAATGCAGGATCCTAACGAAGATACCGAGTGGAATGATATCTTGCGAGCAAAGGGCATCATACCGCAGAAGCCCAAGGAGAAAGAAATCACCGAAGATGAAATCATGGCATGATCGAAAGCACCATCGCGGAGAAGCAGAATGGAAAAGACTTGTCGAAGCTCGATCTCGATGAGCTAGATGAGTTGGAAGACTCGGAGGACGAGGCGGTACTGCAGCAGTATCGGCAGAAACGCATCGCGGAAATGCAAGCGGCCGCCAGCAGGGCACGATTCGGCACGGTGCGGGAAATTTCGGGCCAGGACTACGTTGAGGAAGTGACGAAGGCGGGAGAAGGCATCTACGTTGTGTTGCACCTG]

[+] EMBL AL697621             [GCCCAGGACTTATGGCATCGGTATGTTAAGCNTTTGATTTCTGTATGTATTTTTTCATGTTTGTGAATCAAATAATTGCTTAGAGCAAGCAACAAGAATCGATTGTAAAATCGTACCGTCGTAGCAAGAGGGGAAACAGCTGCACATCAAACCTAAAGGACTTTCCCTCATAGCAGCGTATATTTGCTCACTTTTCCCATCTCACAATGCAGGATCCTAACGAAGATACCGAGTGGAATGATATCTTGCGAGCAAAGGGCATCATACCGCAGAAGCCCAAGGAGAAAGAAATCACCGAAGATGAAATCATGGCATGATCGAAAGCACCATCGCGGAGAAGCAGAATGGAAAAGACTTGTCGAAGCTCGATCTCGATGAGCTAGATGAGTTGGAAGACTCGGAGGACGAGGCGGTACTGCAGCAGTATCGGCAGAAACGCATCGCGGAAATGCAAGCGGCCGCCAGCAGGGCACGATTCGGCACGGTGCGGGAAATTTCGGGCCAGGACTACGTTGAGGAAGTGACGAAGGCGGGAGAAGGCATCTACGTTGTGTTGCACCTG]




>consensus_8603#2
GCCCAGGACTTATGGCATCGGTATGTTAAGCNTTTGATTTCTGTATGTATTTTTTCATGT
TTGTGAATCAAATAATTGCTTAGAGCAAGCAACAAGAATCGATTGTAAAATCGTACCGTC
GTAGCAAGAGGGGAAACAGCTGCACATCAAACCTAAAGGACTTTCCCTCATAGCAGCGTA
TATTTGCTCACTTTTCCCATCTCACAATGCAGGATCCTAACGAAGATACCGAGTGGAATG
ATATCTTGCGAGCAAAGGGCATCATACCGCAGAAGCCCAAGGAGAAAGAAATCACCGAAG
ATGAAATCATGGCATGATCGAAAGCACCATCGCGGAGAAGCAGAATGGAAAAGACTTGTC
GAAGCTCGATCTCGATGAGCTAGATGAGTTGGAAGACTCGGAGGACGAGGCGGTACTGCA
GCAGTATCGGCAGAAACGCATCGCGGAAATGCAAGCGGCCGCCAGCAGGGCACGATTCGG
CACGGTGCGGGAAATTTCGGGCCAGGACTACGTTGAGGAAGTGACGAAGGCGGGAGAAGG
CATCTACGTTGTGTTGCACCTG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8603#0      GCTGCGGAATTCCTCGAGCACTGTTGGCCTACTGGATAATAT-CGTGTGCAGGCCGCATG 59
consensus_8603#2      ------------GCCCAGGACTTATGGCAT-CGGTATGTTAAGCNTTTGATTTCTGTATG 47
consensus_8603#1      ------------------------------------------------------------
                                                                                  

consensus_8603#0      CATCGTTGCGTTCTCGTAGAAAAAGAGTCCACTAAAATATACCTTTATTTCTACAAGTGT 119
consensus_8603#2      TATTTTTTCATGTTTGTGAATCAAATAATTGCTTAGAGCAAGCAACAAGAAT-CGATTGT 106
consensus_8603#1      ---------------------------------------CGATGCCAANGCA-GAATTCC 20
                                                                    *        * *  

consensus_8603#0      AAAATCGTACCGTCGTAGCAAGAGGG-GAAACAGCTGCACATC-AAACCTAAAGGACTTT 177
consensus_8603#2      AAAATCGTACCGTCGTAGCAAGAGGG-GAAACAGCTGCACATC-AAACCTAAAGGACTTT 164
consensus_8603#1      GNGGTTAATACGTCGTAGCAAGAGGGCGAAACAGCTGCACATNTAAACCTAAAGGACTTT 80
                          *     **************** ***************  ****************

consensus_8603#0      CCCTCGTAGCAGCGTATATTTGCTCACTTTTCCCAT-CTCACAATGCAGGATCCTAACGA 236
consensus_8603#2      CCCTCATAGCAGCGTATATTTGCTCACTTTTCCCAT-CTCACAATGCAGGATCCTAACGA 223
consensus_8603#1      CCCTCATAGCAGTGTATATTTGCTCACTTTTCCCATACTCACAATGCAGGATCCTAACGA 140
                      ***** ****** *********************** ***********************

consensus_8603#0      AGATACCGAGTGGAATGATTTCTTGCGAGCAAA-GGGCATCATACCGCAGAAGCCCAAGG 295
consensus_8603#2      AGATACCGAGTGGAATGATATCTTGCGAGCAAA-GGGCATCATACCGCAGAAGCCCAAGG 282
consensus_8603#1      AGATACCGAGTGGAATGATATCTTGCGAGCAAATGGGCATCATACCG-AGAAGCCCAAGG 199
                      ******************* ************* ************* ************

consensus_8603#0      AGAAAGAAATC-ACCGA-AGATG-AAATCATT-GGCATGATCGAAAGCACCATCGCGGAG 351
consensus_8603#2      AGAAAGAAATC-ACCGA-AGATG-AAATCAT--GGCATGATCGAAAGCACCATCGCGGAG 337
consensus_8603#1      AGAAAGAAATCCACCGACAGATGCAAATCATATGGCATGATCGAAAGCACCATCGCGGGA 259
                      *********** ***** ***** *******  *************************  

consensus_8603#0      AAGCAG----AATGGAAA-AGACTTGTCGAAGCTCGATCTCGATGAGCTAGATGAGTT-- 404
consensus_8603#2      AAGCAG----AATGGAAA-AGACTTGTCGAAGCTCGATCTCGATGAGCTAGATGAGTT-- 390
consensus_8603#1      GAANAGCAGANNTGGAAACAGACTTGTCGAAGCTCGATCTCGATGAGCTAGATGNGNTTG 319
                       *  **      ****** *********************************** * *  

consensus_8603#0      GGAGGACT--CGGAGGAC--GAGGC--GGTACTGCAGCAGTATCGGCAGAAACGCATCGC 458
consensus_8603#2      GGAAGACT--CGGAGGAC--GAGGC--GGTACTGCAGCAGTATCGGCAGAAACGCATCGC 444
consensus_8603#1      GAGNGACTACCGGAGGANCGANGGCCGGGTACTGCAGCA----CGNAATACGGGCACGGC 375
                      *   ****  *******     ***  ************    **  * *   ***  **

consensus_8603#0      GGAAATGCAAGCGGCCGCCAGCAGGGCACGATTCGGCACGGTGCGGGAAATTTCGGGCCA 518
consensus_8603#2      GGAAATGCAAGCGGCCGCCAGCAGGGCACGATTCGGCACGGTGCGGGAAATTTCGGGCCA 504
consensus_8603#1      A-AAACGC---CATTCTGCGGAAAATNGCCANACGCNGNGCCCTGCCAAGCCACGGGC-- 429
                        *** **   *   *  * * *     * *  **    *    *  **    *****  

consensus_8603#0      GGACTACGTTGAGGAAGTGACGAAGGCGGGAGAAGGCATCTATGTTGTGCTGCACCTGTA 578
consensus_8603#2      GGACTACGTTGAGGAAGTGACGAAGGCGGGAGAAGGCATCTACGTTGTGTTGCACCTG-- 562
consensus_8603#1      --ACCGAATTCCAGG-GCAACCGGGNTGCGGGANAACTTATAACCGGGGNCCCACGGACA 486
                        **    **   *  *  **   *  * * **   * * **    * *   ***     

consensus_8603#0      CAGCCGTGGTGTCCCGTTCTGTGCGCTCATTAACCAACATTTGACACAGCTGGCCGCGGC 638
consensus_8603#2      ------------------------------------------------------------
consensus_8603#1      CTAACGTTATGACGGAAGTTGAACGANACATGGCGGTGTGACAGCAAACGNNGCCTTTNT 546
                                                                                  

consensus_8603#0      TTTTCCGAT-GACGAAGTTTGTACGTGCAATCGCCACCACGTGCATTGCCAACTATCCGG 697
consensus_8603#2      ------------------------------------------------------------
consensus_8603#1      AAAACCGGTTAATTGGGTATGGNCTTNNGGCCGACACCCTTAGGTACAATAGCCGGTTGG 606
                                                                                  

consensus_8603#0      AACGAAATGTGCCGACCATCTTCGTGTACTACGAGGGCCAGCTGAAGAAACAGTTCATTG 757
consensus_8603#2      ------------------------------------------------------------
consensus_8603#1      AGTTAGTTACACCCCGTATCTCTNGNTNGCGTCGGCTCCAATATNAAAAGCGCCACAAGA 666
                                                                                  

consensus_8603#0      GAGCCGTCGAGCTTGGTGGACCTAATCTAACGTGCGACGAGCTGGAGTATATGCTCGGAC 817
consensus_8603#2      ------------------------------------------------------------
consensus_8603#1      NTATATTGAGGGANACACANCACGNGAGTTTGGGCGCCCNGCGAGGANTCNTATCGACCC 726
                                                                                  

consensus_8603#0      AGGCCAAAGCAATTGAGAGTAATATCAAG-GAGGACCCACGGGAGTCGAAAAAGATCAAA 876
consensus_8603#2      ------------------------------------------------------------
consensus_8603#1      AGGATATAGAACACGAAACGGTTATTAGGTGACNCNTTACGCGCACCATACAGGCCAACA 786
                                                                                  

consensus_8603#0      GACAAACTGTTTGCGGAACTATCGGACAACAATGATTGGTAGGAGGAGACCACGCGTCTT 936
consensus_8603#2      ------------------------------------------------------------
consensus_8603#1      NACCAACCGTT----GCATTCTGGCGCCACACAT-------------------------- 816
                                                                                  

consensus_8603#0      GTAAGATGTCGGCATTTTTCTACAAAATTTAATAAAAACGTCTGCTATTTAAAAAAAAAA 996
consensus_8603#2      ------------------------------------------------------------
consensus_8603#1      ------------------------------------------------------------
                                                                                  

consensus_8603#0      AAAAAAAAAACAAAAAGGCCACAGGTGCTCG 1027
consensus_8603#2      -------------------------------
consensus_8603#1      -------------------------------