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Anopheles gambiae
cluster # 8604 cluster # 8604       Sequences # 11       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8604#0 length = 1414 sequences # 1  
consensus_8604#1 length = 869 sequences # 7  
consensus_8604#2 length = 788 sequences # 3  

consensusID : consensus_8604#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1414
fasta sequence
                              [TATNGCCTCCATGCCAAGAATTTGCGCCCCGAGGTGTTTANTCCTGGAGCGGCCAAGACGAAGCGCAAGGCCTGGAAGCGTATAGGTCACGAAGTGTGACGTACGTCTCGGCTGAGACACTTTACCCCTGCTAAAACCCTGCGCCAAAGTACCGAAACTGGCTTCATTCCTTGACCTGCATGTGCTGCTTAGCCGTATTGAACCAAGNGCCTGCACTGTGGACTGCAACCCCTGGCAGCCTTGAAANNGTGCTCACCGTTTCCCATTTTATGGCCCTGGAGTTCCATTTTGGGCTGGTTGCACAACGCACACGGAAAGTTCCCCCATTCCCTTCTGGACCCGGAATTGTTTACCAACCTGGAANGGCCTATNTGGCAGGACGCCCNGTTTCAATTACCAAGCCCAAACACGGGGGGGTTTAAACTGGCGGTTTCTGGACTTTTCTGTGGCANACGGNGGTTTTGGAAAACCAAATGTTTTTGTACCCCCCCTGGAAANGGCCCTTACCCGGGAGCGTATTCCTTTTCCNCGGGATTTATCCTCANCTNCAAGCACAAATGNGATTTCCCACCCTGGTGTGTCCAACACATGGNGGGTTTTGGGGGGTTTCNGGGTTTCGGGCGCTGTTGTGCAACAACACCACNCTGGTTTTACAGCCGTAGGTGCCCACACCCGAAAGAGNGAGTTTTTGGAAAACCTGCTGCTAACATACCGTCAAACANATTTTCCGCACCNCGGTGAGAAACNTGAGTAACAAAAANCNCCTGTGGAAATCCCCAGAGAGTNGGCATANTATTGGGGCCCCAGAGTTTTTTCCCCAAANACATTCCTTCGGGCCCAGAGCGAGGNNTTTAAAACCCCTTTTTGGTGGCCCATTATTGGGGGAGGCATNTTTGGCGTTTTATCCATGATCANATCGGTGCCCCAAAANAGTGNGCGCACTCCTGNGTGATCAGCACACAGCGCGNAACAATGCGNGGTAAACACAATAGNGGCCNCATGATGTGTGATCGAGCACACAAACTAGGGTACTGGAGGNGTGGCTGGTCAANACAAACAAATGGGTNCTGGAGTGGGGAGACACTTTTTTTGGAAAAGATTTTTACAGTTATTACATTTTTTTCTCTCGACAAACACACCCCGTGCGGGCGACATAGTAGTAGTCTGACCGNNNAGCAAACAGCGGCACAACGNGTCGGNAGGCGCAACAACACTTTTCTACTAGGGGAGGGGGNNTATNACCCCNTTTTTCTGGCCACAACGAACACTTTACAATCAGGGCGNGCCGAGCGAGCGTATTACACTACGGAGCGGTTCACCCCACNCGGCGGCCCCCAAANCATTTTTCACCCCCCCACGAGGTGGGAGNTTCTTCTTCCAAACAGAACCAAACCACGTGTCACAAAACACCCCT]

[+] EMBL AL693830             [TATNGCCTCCATGCCAAGAATTTGCGCCCCGAGGTGTTTANTCCTGGAGCGGCCAAGACGAAGCGCAAGGCCTGGAAGCGTATAGGTCACGAAGTGTGACGTACGTCTCGGCTGAGACACTTTACCCCTGCTAAAACCCTGCGCCAAAGTACCGAAACTGGCTTCATTCCTTGACCTGCATGTGCTGCTTAGCCGTATTGAACCAAGNGCCTGCACTGTGGACTGCAACCCCTGGCAGCCTTGAAANNGTGCTCACCGTTTCCCATTTTATGGCCCTGGAGTTCCATTTTGGGCTGGTTGCACAACGCACACGGAAAGTTCCCCCATTCCCTTCTGGACCCGGAATTGTTTACCAACCTGGAANGGCCTATNTGGCAGGACGCCCNGTTTCAATTACCAAGCCCAAACACGGGGGGGTTTAAACTGGCGGTTTCTGGACTTTTCTGTGGCANACGGNGGTTTTGGAAAACCAAATGTTTTTGTACCCCCCCTGGAAANGGCCCTTACCCGGGAGCGTATTCCTTTTCCNCGGGATTTATCCTCANCTNCAAGCACAAATGNGATTTCCCACCCTGGTGTGTCCAACACATGGNGGGTTTTGGGGGGTTTCNGGGTTTCGGGCGCTGTTGTGCAACAACACCACNCTGGTTTTACAGCCGTAGGTGCCCACACCCGAAAGAGNGAGTTTTTGGAAAACCTGCTGCTAACATACCGTCAAACANATTTTCCGCACCNCGGTGAGAAACNTGAGTAACAAAAANCNCCTGTGGAAATCCCCAGAGAGTNGGCATANTATTGGGGCCCCAGAGTTTTTTCCCCAAANACATTCCTTCGGGCCCAGAGCGAGGNNTTTAAAACCCCTTTTTGGTGGCCCATTATTGGGGGAGGCATNTTTGGCGTTTTATCCATGATCANATCGGTGCCCCAAAANAGTGNGCGCACTCCTGNGTGATCAGCACACAGCGCGNAACAATGCGNGGTAAACACAATAGNGGCCNCATGATGTGTGATCGAGCACACAAACTAGGGTACTGGAGGNGTGGCTGGTCAANACAAACAAATGGGTNCTGGAGTGGGGAGACACTTTTTTTGGAAAAGATTTTTACAGTTATTACATTTTTTTCTCTCGACAAACACACCCCGTGCGGGCGACATAGTAGTAGTCTGACCGNNNAGCAAACAGCGGCACAACGNGTCGGNAGGCGCAACAACACTTTTCTACTAGGGGAGGGGGNNTATNACCCCNTTTTTCTGGCCACAACGAACACTTTACAATCAGGGCGNGCCGAGCGAGCGTATTACACTACGGAGCGGTTCACCCCACNCGGCGGCCCCCAAANCATTTTTCACCCCCCCACGAGGTGGGAGNTTCTTCTTCCAAACAGAACCAAACCACGTGTCACAAAACACCCCT]


>consensus_8604#0 TATNGCCTCCATGCCAAGAATTTGCGCCCCGAGGTGTTTANTCCTGGAGCGGCCAAGACG AAGCGCAAGGCCTGGAAGCGTATAGGTCACGAAGTGTGACGTACGTCTCGGCTGAGACAC TTTACCCCTGCTAAAACCCTGCGCCAAAGTACCGAAACTGGCTTCATTCCTTGACCTGCA TGTGCTGCTTAGCCGTATTGAACCAAGNGCCTGCACTGTGGACTGCAACCCCTGGCAGCC TTGAAANNGTGCTCACCGTTTCCCATTTTATGGCCCTGGAGTTCCATTTTGGGCTGGTTG CACAACGCACACGGAAAGTTCCCCCATTCCCTTCTGGACCCGGAATTGTTTACCAACCTG GAANGGCCTATNTGGCAGGACGCCCNGTTTCAATTACCAAGCCCAAACACGGGGGGGTTT AAACTGGCGGTTTCTGGACTTTTCTGTGGCANACGGNGGTTTTGGAAAACCAAATGTTTT TGTACCCCCCCTGGAAANGGCCCTTACCCGGGAGCGTATTCCTTTTCCNCGGGATTTATC CTCANCTNCAAGCACAAATGNGATTTCCCACCCTGGTGTGTCCAACACATGGNGGGTTTT GGGGGGTTTCNGGGTTTCGGGCGCTGTTGTGCAACAACACCACNCTGGTTTTACAGCCGT AGGTGCCCACACCCGAAAGAGNGAGTTTTTGGAAAACCTGCTGCTAACATACCGTCAAAC ANATTTTCCGCACCNCGGTGAGAAACNTGAGTAACAAAAANCNCCTGTGGAAATCCCCAG AGAGTNGGCATANTATTGGGGCCCCAGAGTTTTTTCCCCAAANACATTCCTTCGGGCCCA GAGCGAGGNNTTTAAAACCCCTTTTTGGTGGCCCATTATTGGGGGAGGCATNTTTGGCGT TTTATCCATGATCANATCGGTGCCCCAAAANAGTGNGCGCACTCCTGNGTGATCAGCACA CAGCGCGNAACAATGCGNGGTAAACACAATAGNGGCCNCATGATGTGTGATCGAGCACAC AAACTAGGGTACTGGAGGNGTGGCTGGTCAANACAAACAAATGGGTNCTGGAGTGGGGAG ACACTTTTTTTGGAAAAGATTTTTACAGTTATTACATTTTTTTCTCTCGACAAACACACC CCGTGCGGGCGACATAGTAGTAGTCTGACCGNNNAGCAAACAGCGGCACAACGNGTCGGN AGGCGCAACAACACTTTTCTACTAGGGGAGGGGGNNTATNACCCCNTTTTTCTGGCCACA ACGAACACTTTACAATCAGGGCGNGCCGAGCGAGCGTATTACACTACGGAGCGGTTCACC CCACNCGGCGGCCCCCAAANCATTTTTCACCCCCCCACGAGGTGGGAGNTTCTTCTTCCA AACAGAACCAAACCACGTGTCACAAAACACCCCT



consensusID : consensus_8604#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 869
fasta sequence
                              [CCGCGGACGCGTGGGCGGACGCGTGGGGAAAAAGGTAACTGAAAAAAGATTGCAAAATAGAAATGAAATCATCATCCTCTTGACACGAAGGAGCAGAAAAAGAAGAAAACAACAAATGAGAGATGGGTGGTGGTCGATGTAGAAGAAGAGAAAAAAGCAAAAAAAGCGACACAAGAGCAAGCACAGTAGCAAAAGAGAAAAACAGAAAATTGAGGAAAAAAACAGTAAACAACAGAAAAAAATGTCTACAAAGATTGAAAGAGAAGAGAGAGTACCTTCAATAATTGAACCATGGAAACAAAACTTTGTCAGGACAAGTGAAATGTGCTAAAAGTAACTTGCAGAAACACTTTTTGAAACAACAAGGAGAAACTACTACAAAAATGCGTGAAGCAGCAGTAGAAAGTATGGAAATTAAACTTTTCTGTCTCTGCCAGGGCGCATATGTTGTGTGAAGATTATTGCAAAAGTTTATGAAAAACAATTCTGAACTTTTACGTG-AAAAAAGCACAGCAGTACAGTGTAGTCGCGTGTACTGTAGGGTAGTAGGTAGTATCCGACCAACTAGCGAGAAGAGAAGGTTACAAAAAGAAGAAAACAAAAAACGCAAAAAATGTGAGCCAAACACAACCATACGATTGGGAATGTTCTTATGCAACAGCAACAGCAACAAAACAAAAAAAGAAGCGATCCTTATTTCAAAGAGATACAACGGAACAACCGATGCGACAGTCTTTAAAATGATGTAAACGAGAAATAAACAAGCAAAAAATTGAAAAATAACAAAAAAAAGTGAAAACAAACATATATAAAAACAAAAAAGAGAAAAACTTACGTATGGAAGAAGCGGATAGAGAGAAAGAGAGAAG]

[+] EMBL BM594980             [CCGCGGACGCGTGGGCGGACGCGTGGGGAAAAAGGTAACTGAAAAAAGATTGCAAAATAGAAATGAAATCATCATCCTCTTGACACGAAGGAGCAGAAAAAGAAGAAAACAACAAATGAGAGATGGGTGGTGGTCGATGTAGAAGAAGAGAAAAAAGCAAAAAAAGCGACACAAGAGCAAGCACAGTAGCAAAAGAGAAAAACAGAAAATTGAGGAAAAAAACAGTAAACAACAGAAAAAAATGTCTACAAAGATTGAAAGAGAAGAGAGAGTACCTTCAATAATTGAACCATGGAAACAAAACTTTGTCAGGACAAGTGAAATGTGCTAAAAGTAACTTGCAGAAACACTTTTTGAAACAACAAGGAGAAACTACTACAAAAATGCGTGAAGCAGCAGTAGAAAGTATGGAAATTAAACTTTTCTGTCTCTGCCAGGGCGCATATGTTGTGTGAAGATTATTGCAAAAGTTTATGAAAAACAATTCTGAACTTTTACGTG AAAAAAGCACAGCAGTACAGTGTAGTCGCGTGTACTGTAGGGTAGTAGGTAGTATCCGACCAACTAGCGAGAAGAGAAGGTTACAAAAAGAAGAAAACAAAAAACGCAAAAAATGTGAGCCAAACACAACCATACGATTGGGAATGTTCTTATGCAACAGCAAC                                                                                                                                                                                                            ]
[+] EMBL BM623482             [                                                                                                                                ccgGGTCGATGTAGAAGAAGAGAAAAAAGCAAAAAAAGCGACACAAGAGCAAGCACAGTAGCAAAAGAGAAAAACAGAAAATTGAGGAAAAAAACAGTAAACAACAGAAAAAAATGTCTACAAAGATTGAAAGAGAAGAGAGAGTACCTTCAATAATTGAACCATGGAAACAAAACTTTGTCAGGACAAGTGAAATGTGCTAAAAGTAACTTGCAGAAACACTTTTTGAAACAACAAGGAGAAACTACTACAAAAATGCGTGAAGCAGCAGTAGAAAGTATGGAAATTAAACTTTTCTGTCTCTGCCAGGGCGCATATGTTGTGTGAAGATTATTGCAAAAGTTTATGAAAAACAATTCTGAACTTTTACGTG AAAAAAGCACAGCAGTACAGTGTAGTCGCGTGTACTGTAGGGTAGTAGGTAGTATCCGACCAACTAGCGAGAAGAGAAGGTTACAAAAAGAAGAAAACAAAAAACGCAAAAAATGTGAGCCAAACACAACCATACGATTGGGAATGTTCTTATGCAACAGCAACAGCAACAAAACAAAAAAAGAAGCGATCCTTATTTCAAAGAGATACAACGGAACAACCGATGCGACAG                                                                                                                                         ]
[+] EMBL BM648881             [                                                                                                                                                                           ccgGAGCAAGCACAGTAGCAAAAGAGAAAAACAGAAAATTGAGGAAAAAAACAGTAAACAACAGAAAAAAATGTCTACAAAGATTGAAAGAGAAGAGAGAGTACCTTCAATAATTGAACCATGGAAACAAAACTTTGTCAGGACAAGTGAAATGTGCTAAAAGTAACTTGCAGAAACACTTTTTGAAACAACAAGGAGAAACTACTACAAAAATGCGTGAAGCAGCAGTAGAAAGTATGGAAATTAAACTTTTCTGTCTCTGCCAGGGCGCATATGTTGTGTGAAGATTATTGCAAAAGTTTATGAAAAACAATTCTGAACTTTTACGTG AAAAAAGCACAGCAGTACAGTGTAGTCGCGTGTACTGTAGGGTAGTAGGTAGTATCCGACCAACTAGCGAGAAGAGAAGGTTACAAAAAGAAGAAAACAAAAAACGCAAAAAATGTGAGCCAAACACAACCATACGATTGGGAATGTTCTTATGCAACAGCAACAGCAACAAAACAAAAAAAGAAGCGATCCTTATTTCAAAGAGATACAACGGAACAACCGATGCGACAGTCTTTAAAATGATGTAAACGAGAAATAAACAAGCAAAAAATTGAAAAATAACAAAAAAAAGTGAAAACAAACATATATAAAAACAAAAAAGAGAAAAACTTACGTATGGAAGAAGC                     ]
[+] EMBL BM653648             [                                                                                                                                                                                                                             ccgGTAAACAACAGAAAAAAATGTCTACAAAGATTGAAAGAGAAGAGAGAGTACCTTCAATAATTGAACCATGGAAACAAAACTTTGTCAGGACAAGTGAAATGTGCTAAAAGTAACTTGCAGAAACACTTTTTGAAACAACAAGGAGAAACTACTACAAAAATGCGTGAAGCAGCAGTAGAAAGTATGGAAATTAAACTTTTCTGTCTCTGCCAGGGCGCATATGTTGTGTGAAGATTATTGCAAAAGTTTATGAAAAACAATTCTGAACTTTTACGTG AAAAAAGCACAGCAGTACAGTGTAGTCGCGTGTACTGTAGGGTAGTAGGTAGTATCCGACCAACTAGCGAGAAGAGAAGGTTACAAAAAGAAGAAAACAAAAAACGCAAAAAATGTGAGCCAAACACAACCATACGATTGGGAATGTTCTTATGCAACAGCAACAGCAACAAAACAAAAAAAGAAGCGATCCTTATTTCAAAGAGATACAACGGAACAACCGATGCGACAGTCTTTAAAATGATGTAAACGAGAAATAAACAAGCAAAAAATTGAAAAATAACAAAAAAAAGTGAAAACAAACATATATAAAAACAAAAAAGAGAAAAACTTACGTATGGAAGAAGCGGATAGAGAGAAAGAGAGAAG]
[+] EMBL BM641663             [                                                                                                                                                                                                                                       ccgGAAAAAAATGTCTACAAAGATTGAAAGAGAAGAGAGAGTACCTTCAATAATTGAACCATGGAAACAAAACTTTGTCAGGACAAGTGAAATGTGCTAAAAGTAACTTGCAGAAACACTTTTTGAAACAACAAGGAGAAACTACTACAAAAATGCGTGAAGCAGCAGTAGAAAGTATGGAAATTAAACTTTTCTGTCTCTGCCAGGGCGCATATGTTGTGTGAAGATTATTGCAAAAGTTTATGAAAAACAATTCTGAACTTTTACGTG AAAAAAGCACAGCAGTACAGTGTAGTCGCGTGTACTGTAGGGTAGTAGGTAGTATCCGACCAACTAGCGAGAAGAGAAGGTTACAAAAAGAAGAAAACAAAAAACGCAAAAAATGTGAGCCAAACACAACCATACGATTGGGAATGTTCTTATGCAACAGCAACAGCAACAAAACAAAAAAAGAAGCGATCCTTATTTCAAAGAGATACAACGGAACAACCGATGCGACAGTCTTTAAAATGATGTAAACGAGAAATAAACAAGCAAAAAATTGAAAAATAACAAAAAAAAGTGAAAACAAACATATAT                                                           ]
[+] EMBL CF541627             [                                                                                                                                                                                                                                                                                                              ACTTTGTCAGGACAAGTGAAATGTGCTAAAAGTAACTTGCAGAAATACTTTTTGAAACAACAAGGAGAAACTACTACAAAAATGCGTGAAGCAGCAGTAGAAAGTATGGAAATTAAACTTTTCTGTCTCTGCCAGGGCGCATATGTTGTGTGAAGATTATTGCAAAAGTTTATGAAAAACAATTCTGAACTTTTACGTGAAAAAAAGCACAGCAGTACAGTGTAGTCGCGTGTACTGTAGGGTAGTAGGTAGTATCCGACCAACTAGCGAGAAGAGAAGGTTACGCAAAAAAAAAA                                                                                                                                                                                                                                                                                ]
[+] EMBL BM606117             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ccgGCAGTACAGTGTAGTCGCGTGTACTGTAGGGTAGTAGGTAGTATCCGACCAACTAGCGAGAAGAGAAGGTTACAAAAAGAAGAAAACAAAAAACGCAAAAAATGTGAGCCAAACACAACCATACGATTGGGAATGTTCTTATGCAACAGCAACAGC                                                                                                                                                                                                         ]


>consensus_8604#1 CCGCGGACGCGTGGGCGGACGCGTGGGGAAAAAGGTAACTGAAAAAAGATTGCAAAATAG AAATGAAATCATCATCCTCTTGACACGAAGGAGCAGAAAAAGAAGAAAACAACAAATGAG AGATGGGTGGTGGTCGATGTAGAAGAAGAGAAAAAAGCAAAAAAAGCGACACAAGAGCAA GCACAGTAGCAAAAGAGAAAAACAGAAAATTGAGGAAAAAAACAGTAAACAACAGAAAAA AATGTCTACAAAGATTGAAAGAGAAGAGAGAGTACCTTCAATAATTGAACCATGGAAACA AAACTTTGTCAGGACAAGTGAAATGTGCTAAAAGTAACTTGCAGAAACACTTTTTGAAAC AACAAGGAGAAACTACTACAAAAATGCGTGAAGCAGCAGTAGAAAGTATGGAAATTAAAC TTTTCTGTCTCTGCCAGGGCGCATATGTTGTGTGAAGATTATTGCAAAAGTTTATGAAAA ACAATTCTGAACTTTTACGTGAAAAAAGCACAGCAGTACAGTGTAGTCGCGTGTACTGTA GGGTAGTAGGTAGTATCCGACCAACTAGCGAGAAGAGAAGGTTACAAAAAGAAGAAAACA AAAAACGCAAAAAATGTGAGCCAAACACAACCATACGATTGGGAATGTTCTTATGCAACA GCAACAGCAACAAAACAAAAAAAGAAGCGATCCTTATTTCAAAGAGATACAACGGAACAA CCGATGCGACAGTCTTTAAAATGATGTAAACGAGAAATAAACAAGCAAAAAATTGAAAAA TAACAAAAAAAAGTGAAAACAAACATATATAAAAACAAAAAAGAGAAAAACTTACGTATG GAAGAAGCGGATAGAGAGAAAGAGAGAAG



consensusID : consensus_8604#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 788
fasta sequence
                              [TTCTGGTGTGGCAATTCTTTTATTTTAATTCAATGAGGCCGAGACAAAACGACAATCGCTAACGAAACGGGGATCGATTTCGCCTCCCCCTCGTTCGAGTAGAACCGCTTGAAGTCGTCGAAGTTGAACGTGCCCTTCGGCAGCGTTTCGAACGGATCGTTCTGCTTCGGCTCGGCGGCCAGCAGCTCGTCGGCTGCGTCCGGCTGCTCGGCCGGTTCCGGCTTCTCCGGCGCCGGCTTCTTCTCCTTCTTTTCCTTCTTCTTCTCTGCTGGAGCGCCGCCGCTTCCGCCGCTCACCTTGGCCTGGAATTCGGCGTACTTCTTCGGGTCGGCCTGTGCGACCTTGGCGCAGAGCGCCGGCACCTTGACCACCGCCTGCACCTGCGGCTGGTTCATCAGCGTGGTGAACCACCGGTTGACGGCGCCGAACGGTGCGCGGAAGGCAGGATCCAGCACGTACTCGTACGCGTGCAGCAGCTTGGTAAATACGACCACATCGGCCAGCTTTTTCCGCCCGCCGACCAGGTACGTCTGCTTCAGCAGGCGGCTGTTGAGTGCGGCCAGGCCGCGACGCAGCTCCTCCTTCGCACGCTCAACGTTGTTCTTGTTGTACGGCACGATGCCAATCATCGGGAACGTCCAGCCCTGGACAGCAGGCAGCAGCACATTGTCGGCGAAGCTGAGGAAGGACTGCACCTCGGCCCGGTGGAAGTCGTTCGCACCGCGCAGCTGCTCATTGGCCACGTAGTAGGCGATCGCGTTGCTCTCCGTCAGCGGACGCGTGGGCGG]

[+] EMBL CNS08UM2             [TTCTGGTGTGGCAATTCTTTTATTTTAATTCAATGAGGCCGAGACAAAACGACAATCGCTAACGAAACGGGGATCGATTTCGCCTCCCCCTCGTTCGAGTAGAACCGCTTGAAGTCGTCGAAGTTGAACGTGCCCTTCGGCAGCGTTTCGAACGGATCGTTCTGCTTCGGCTCGGCGGCCAGCAGCTCGTCGGCTGCGTCCGGCTGCTCGGCCGGTTCCGGCTTCTCCGGCGCCGGCTTCTTCTCCTTCTTTTCCTTCTTCTTCTCTGCTGGAGCGCCGCCGCTTCCGCCGCTCACCTTGGCCTGGAATTCGGCGTACTTCTTCGGGTCGGCCTGTGCGACCTTGGCGCAGAGCGCGGGCACCTTGACCACCGCCTGCACCTGCGGCTGGTTCATCAGCGTGGTGAACCACCGGTTGACGGCGCCGAACGGTGCGCGGAAGGCAGGATCCAGCACGTACTCGTACGCGTGCAGCAGCTTGGTAAATACGACCACATCGGCCAGCTTTTTCCGCCCGCCGA                                                                                                                                                                                                                                                                            ]
[+] EMBL CNS08M6U             [  CTGGTGTGGCAATTCTTTTATTTTAATTCAATGAGGCCGAGACAAAACGACAATCGCTAACGAAACGGGGATCGATTTCGCCTCCTCCTCGTTCGAGTAGAACCGCTTGAAGTCGTCGAAGTTGAACGTGCCCTTCGGCAGCGTTTCGAACGGATCGTTCTGCTTCGGCTCGGCGGCCAGCAGCTCGTCGGCTGCGTCCGGCTGCTCGGCCGGTTCCGGCTTCTCCGGCGCCGACTTCTTCTCCTTCTTTTCCTTCTTCTTCTCTGCTGGAGCGCCGCCGCTTCCGCCGCTCACCTTGGCCTGGAATTCGGCGTACTTCTTCGGGTCGGCCTTTTCGACCTTGGCGCAGAGC CCGGCACCTTGACCACCGCCTGCACCTGCGGCTGGTTCATCAGCGTGGTGAACCACCGGTTGACGGCGCCGAACGGTGCGCGGAAGGCAGGATCCAGCACGTACT                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL BM623460             [                                                                                                 AGTAGAACCGCTTGAAGTCGTCGAAGTTGAACGTGCCCTTCGGCAGCGTTTCGAACGGATCGTTCTGCTTCGGCTCGGCGGCCAGCAGCTCGTCGGCTGCGTCCGGCTGCTCGGCCGGTTCCGGCTTCTCCGGCGCCGGCTTCTTCTCCTTCTTTTCCTTCTTCTTCTCTGCTGGAGCGCCGCCGCTTCCGCCGCTCACCTTGGCCTGGAATTCGGCGTACTTCTTCGGGTCGGCCTGTGCGACCTTGGCGCAGAGCGCCGGCACCTTGACCACCGCCTGCACCTGCGGCTGGTTCATCAGCGTGGTGAACCACCGGTTGACGGCGCCGAACGGTGCGCGGAAGGCAGGATCCAGCACGTACTCGTACGCGTGCAGCAGCGTGGCAAACACGACCACATCGGCCAGCGTGATCCGCTCGCCGACCAGGTACGTCTGCTTCAGCAGGCGGCTGTTGAGTGCGGCCAGGCCGCGACGCAGCTCCTCCTTCGCACGCTCAACGTTGTTCTTGTTGTACGGCACGATGCCAATCATCGGGAACGTCCAGCCCTGGACAGCAGGCAGCAGCACATTGTCGGCGAAGCTGAGGAAGGACTGCACCTCGGCCCGGTGGAAGTCGTTCGCACCGCGCAGCTGCTCATTGGCCACGTAGTAGGCGATCGCGTTGCTCTCCGTCAGCGGACGCGTGGGCGG]


>consensus_8604#2 TTCTGGTGTGGCAATTCTTTTATTTTAATTCAATGAGGCCGAGACAAAACGACAATCGCT AACGAAACGGGGATCGATTTCGCCTCCCCCTCGTTCGAGTAGAACCGCTTGAAGTCGTCG AAGTTGAACGTGCCCTTCGGCAGCGTTTCGAACGGATCGTTCTGCTTCGGCTCGGCGGCC AGCAGCTCGTCGGCTGCGTCCGGCTGCTCGGCCGGTTCCGGCTTCTCCGGCGCCGGCTTC TTCTCCTTCTTTTCCTTCTTCTTCTCTGCTGGAGCGCCGCCGCTTCCGCCGCTCACCTTG GCCTGGAATTCGGCGTACTTCTTCGGGTCGGCCTGTGCGACCTTGGCGCAGAGCGCCGGC ACCTTGACCACCGCCTGCACCTGCGGCTGGTTCATCAGCGTGGTGAACCACCGGTTGACG GCGCCGAACGGTGCGCGGAAGGCAGGATCCAGCACGTACTCGTACGCGTGCAGCAGCTTG GTAAATACGACCACATCGGCCAGCTTTTTCCGCCCGCCGACCAGGTACGTCTGCTTCAGC AGGCGGCTGTTGAGTGCGGCCAGGCCGCGACGCAGCTCCTCCTTCGCACGCTCAACGTTG TTCTTGTTGTACGGCACGATGCCAATCATCGGGAACGTCCAGCCCTGGACAGCAGGCAGC AGCACATTGTCGGCGAAGCTGAGGAAGGACTGCACCTCGGCCCGGTGGAAGTCGTTCGCA CCGCGCAGCTGCTCATTGGCCACGTAGTAGGCGATCGCGTTGCTCTCCGTCAGCGGACGC GTGGGCGG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8604#0      TATNGCCTCCATGCCAAGAATTTGCGCCCCGAGGTGTTTANTCCTGGAGCGGCCAAGACG 60
consensus_8604#2      ------------------------------------------------------------
consensus_8604#1      ------------------------------------------------------------
                                                                                  

consensus_8604#0      AAGCGCAAGGCCTGGAAGCGTATAGGTCACGAAGTGTGACGTACGTCTCGGCTGAGACAC 120
consensus_8604#2      ------------------------------------------------------------
consensus_8604#1      ------------------------------------------------------------
                                                                                  

consensus_8604#0      TTTACCCCTGCTAAAACCCTGCGCCAAAGTACCGAAACTGGCTTCATTCCTTGACCTGCA 180
consensus_8604#2      ------------------------------------------------------------
consensus_8604#1      ------------------------------------------------------------
                                                                                  

consensus_8604#0      TGTGCTGCTTAGCCGTATTGAACCAAGNGCCTGCACTGTGGACTGCAACCCCTGGCAGCC 240
consensus_8604#2      ------------------------------------------------------------
consensus_8604#1      ------------------------------------------------------------
                                                                                  

consensus_8604#0      TTGAAANNGTGCTCACCGTTTCCCATTTTATGGCCCTGGAGTTCCATTTTGGGCTGGTTG 300
consensus_8604#2      ------------------------------------------------------------
consensus_8604#1      ------------------------------------------------------------
                                                                                  

consensus_8604#0      CACAACGCACACGGAAAGTTCCCCCATTCCCTTCTGGACCCGGAATTGTTTACCAACCTG 360
consensus_8604#2      ------------------------------------------------------------
consensus_8604#1      ------------------------------------------------------------
                                                                                  

consensus_8604#0      GAANGGCCTATNTGGCAGGACGCCCNGTTTCAATTACCAAGCCCAAACACGGGGGGGTTT 420
consensus_8604#2      ------------------------------------------------------------
consensus_8604#1      ------------------------------------------------------------
                                                                                  

consensus_8604#0      AAACTGGCGGTTTCTGGACTTTTCTGTGGCANACGGNGGTTTTGGAAAACCAAATGTTTT 480
consensus_8604#2      ------------------------------------------------------------
consensus_8604#1      ------------------------------------------------------------
                                                                                  

consensus_8604#0      TGTACCCCCCCTGGAAANGGCCCTTACCCGGGAGCGTATTCCTTTTCCNCGGGATTTATC 540
consensus_8604#2      ------------------------------------------------------------
consensus_8604#1      ---------CCGCGGACGCGTGGGCGGACGCGTGGGGAAAAAGGTAACTGAAAAAAGATT 51
                                                                                  

consensus_8604#0      CTCANCTNCAAGCACAAATGNGATTTCCCACCCTGGTGTGTCCAACACATGGNGGGTTTT 600
consensus_8604#2      ---TTCTGGTGTGGCAATTCTTTTATTTTAATTCAATGAGGCCGAGACAAAACGACAATC 57
consensus_8604#1      GCAAAATAGAAATGAAATCATCATCCTCTTGACACGAAGGAGCAGAAAAAGAAGAAAAC- 110
                            *        **      *               *  *   * *    *      

consensus_8604#0      GGGGGGTTTCNGGGTTTCGGGCGCTGTTGTGCAACAACACCACNCTGGTTTTACAGCCGT 660
consensus_8604#2      G------CTAACGAAACGGGGATCGATTTCGCCTCCCCCTCGTTCGAGTAGAACCGCTTG 111
consensus_8604#1      ---------AACAAATGAGAGATGGGTGGTG-GTCGATGTAGAAGAAGAGAAAAAAGCAA 160
                                        * *     *   *   *            *    *       

consensus_8604#0      AGGTGCCCACACCCGAAAGAGNGAGTTTTTGGAAAACCTGCTGCTAACATACCGTCAAAC 720
consensus_8604#2      AAGTCGTCGAAGTTGAA----CGTGCCCTTCGGCAGC--GTTTCGAACGGATCGTTCTGC 165
consensus_8604#1      AAAAAGCGACACAAGAG----CAAGCACAGTAGCAAAA-GAGAAAAACAGAAAATTGAGG 215
                      *         *   **        *         *    *     ***  *   *     

consensus_8604#0      ANATTTTCCGCACCNCGGTGAGAAACNTGAGTAACAAAAANCNCCTGTGGAAATCCCCAG 780
consensus_8604#2      -----TTCGGCTCGGCGGCCAGCAGCTCGT-CGGCTGCGTCCGGCTG--------CTCGG 211
consensus_8604#1      AAAAAAACAGTAAACAACAGAAAAAAATGT-CTACAAAGATTGAAAGAGAA------GAG 268
                             * *          *  *    *     *           *            *

consensus_8604#0      AGAGTNGGCATANTATTGGGGCCCCAGAGTTTTTTCCCCAAANACATTC--CTTCGGGCC 838
consensus_8604#2      CCGGTT--CCGGCTTCTCCGGCGCCGGCTTCTTCTCCTTCTTTTCCTTCTTCTTCTCTGC 269
consensus_8604#1      AGAGTACCTTCAATAATTGAACCATGGAAACAAAACTTTGTCAGGACAAGTGAAATGTGC 328
                         **        *  *    *    *        *                       *

consensus_8604#0      CAGAGCGAGGNNTTTAAAACCCCTTTTTGGTGGCCCATTATTGGGGGAGGCATNTTTGGC 898
consensus_8604#2      TGGAGCGCCGCCGCTTCCGCCGCTCACCT-TGGCCTGGAATTCGGCG---TACTTCTTCG 325
consensus_8604#1      TAAAA-GTAACTTGCAGAAACACTTTTTG-----AAACAACAAGGAGA--AACTACTACA 380
                         *  *             * **               *   ** *    *    *   

consensus_8604#0      GTTTTATCCATGATCANATCGGTGCCCCAAAANAGTGNGCGCACTCCTGNGTGATCAGCA 958
consensus_8604#2      GGTCGGCCTGTG-CGACCTTGGCGC------AGAGCGCCGGCACCT-----TGACCACCG 373
consensus_8604#1      AAAATGCGTGAAGCAGCAGTAGAAA----GTATGGAAATTAAACTTTTCTGTCTCTGCCA 436
                                           *         *  *       **       *      * 

consensus_8604#0      CACAGCGCGNAACAATGCGNGGTAAACACAATAGNGGCCNCATGATGTGTGATCGAGCAC 1018
consensus_8604#2      C-CTGCACCTGCGGCTGGTTCATCAGCGTGGTGAA--CCAC--------CGGTTGACGGC 422
consensus_8604#1      GGGCGCATATGTTGTGTGAAGATTATTGCAAAAGT--TTATG------AAAAACAATTCT 488
                          **                * *                              *    

consensus_8604#0      ACAAACTAGGGTACTGGAGGNGTGGCTGGTCAANACAAACAAATGGGTNCTGGAGTGGGG 1078
consensus_8604#2      GCCGAACGGTGCGCGGAAGGCAGGATC---CAGCACGTACTCGTACGCG-TGCAGCAG-- 476
consensus_8604#1      GAACTTTTACGTGAAAAAAGCACAGCAGTACAGTGTAGTCGCGTGTACTGTAGGGTAG-- 546
                                *      * *          **       *   *      *   *  *  

consensus_8604#0      AGACACTTTTTTTGGAAAAGATTTTTACAGTTATTACATTTTTTTCTCTCGACAAACACA 1138
consensus_8604#2      ----------CTTGGTAAATACGACCACATCGGCCA-GCTTTTTCCGCCCGCCGACCAG- 524
consensus_8604#1      -----------TAGGTAGTATCCGACCAACTAGCGAGAAGAGAAGGTTACAAAAAGAAGA 595
                                 * ** *           *      *             *    *  *  

consensus_8604#0      CCCCGTGCGGGCGACATAGTAGTAGTCTGACCGNNNAG--CAAACAGCGGCACAACGNGT 1196
consensus_8604#2      ----GTACGTCTGCTTCAGCAGGCGGCTGTTGAGTGCGGCCAGGCCGCGACGCAGCTCCT 580
consensus_8604#1      ----AAACAAAAAACGCAAAAAATGTGAGCCAAACACAACCATACGATTGGGAATGTTCT 651
                             *         *  *   *   *           **  *        *     *

consensus_8604#0      CG---GNAGGCGCAACAACACTTTTCTACTAGGGGAGGGGGNNTATNACCCCNTTTTTCT 1253
consensus_8604#2      CCTTCGCACGCTCAACGTTGTTCTTGTTGTACGGCACGATGCCAATCATCGGGAACGTCC 640
consensus_8604#1      TAT--GCAACAGCAACAGCAACAAAACAAAAAAAGAAGCGATCC-TTATTTCAAAGAGAT 708
                           * *    ****              *    * *       * *            

consensus_8604#0      GGCC----ACAACGAACA-CTTTACAATCAGGGCGNGCCGAGCGAGCGTATTACACTACG 1308
consensus_8604#2      AGCCCTGGACAGCAGGCAGCAGCACATTGTCGGCGAAGCTGAGGAA-GGACTGCACCTCG 699
consensus_8604#1      ACAACGGAACAACCGATGCGACAGTCTTTAAAATGATGTAAACGAG-AAATAAACAAGCA 767
                              *** *              *      *        **    *        * 

consensus_8604#0      GAGCGGTTCACCCCACNCGGCGGCCCCCAAANCATTTTT-CACCCCCCCACGAGGTGGGA 1367
consensus_8604#2      GCCCGGTGGAAGTCGTTCGC--ACCGCGCAGCTGCTCAT-TGGCCACGTAGTAGGCGATC 756
consensus_8604#1      AAAAATTGAAAAATAACAAAAAAAAGTGAAAACAAACATATATAAAAACAAAAAAGAGAA 827
                            *  *                   *        *          *  *       

consensus_8604#0      GNTTCTTCTTCCAAACAGAACCAAACCACGTGTCACAAAACACCCCT 1414
consensus_8604#2      GCGTTGCTCTCCGTC---AGCGGACGCGTGGGCGG------------ 788
consensus_8604#1      AAACTTACGTATGGAAGAAGCGGATAGAGAGAAAGAGAGAAG----- 869
                               *        * *  *                       




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)