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Anopheles gambiae
cluster # 8636 cluster # 8636       Sequences # 11       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8636#0 length = 1094 sequences # 3  
consensus_8636#1 length = 995 sequences # 5  
consensus_8636#2 length = 774 sequences # 2  
consensus_8636#3 length = 426 sequences # 1  

consensusID : consensus_8636#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1094
fasta sequence
                              [CGGTGCAGCGACCAGAAGCGGCAGAAGCGGAGAAGAAGCACGGTGCCTCGCTGGAACTGACGGACGATGAGAAGTTCAACCTGCGCATCACCGGCAACGATCTCGTCACGCTGCAGGACATGAACTGGCTGAACGATGCGGTGATCAACTTCTACATGGAGCTGCTGCGCGAGCGAGGCGAGCAGAAGCGCGACCAGGGCCTGTTCAGCCAGCGCAAGTCGCTGATCGAGCAGGAGCGGCACCGGCTCGGCAGCCTGCGCCAGTGCACGCAGCAGCAGGAGACGGAGGCGCGCAACAAGCTGCACCACTACGTCTGCTCGTTCTACAAGTTCGACGTGCTGGACGAGTCGGAGCTGAAGGAGGGTACGCCCGAGCCGGAGGTGGTGCCGCTGCCCGAGCTGACCCGGGAGCAGCTGGACGAGATGCAGCGCAACCG-GCACCGGCCACCAGGTGGTGATGGAGAAGTTCAACCTGCGCATCACCGGCACGTACGCGCTCGGCACGGTCGGGTTTTGGGCGACCTCCTCCTTGAACGCTTCCACGAACCGCTCGGTCAGGGTGCGGAACTGCACCGAGGGCATCACCAGGATCGGTTGCTGCAGCCGGTCGCGCAGATCCTTGATGTGCACCACGTTGATGCGTATGATGAACGGCTTGATGCGGGACTGCTGCTGGGGCTTCACGCCGATATTGACGAACTCGGCCGACTCGAGCGTGTCGGTGATCACCTCCTTGGTGTCGATCTGCGGTGTGTGAGGCGAAACAGGGAGCGGAAATTAGAGATCGGGGACGGGACAGGAGGAACAGCATCCTACCACTCACCTTGTACGCGTACAGCAGTGCTTCACTCTGGGGGATGATATTGTGCACGTACATGTTCGTTTTAATGATCCAACTTTCCGTCACCACCAGGGTCGAGATAGCGTTGGAACGGATGATAATTTTGGTATCCCTGGTAAAAGAGAGCGAGCAGAACCGTTTGGATTGAATGGATAGAAAGAAGAAATGTGGGGAAAAAACTGCGAGAGTCCTCGGGGGGATACGTGTACGGTGTGCGCTAGCGAGAAGCAGTTGTTTATTTAATAATAAATATA]

[+] EMBL CNS08V1I             [CGGTGCAGCGACCAGAAGCGGCAGAAGCGGAGAAGAAGCACGGTGCCTCGCTGGAACTGACGGACGATGAGAAGTTCAACCTGCGCATCACCGGCAACGATCTCGTCACGCTGCAGGACATGAACTGGCTGAACGATGCGGTGATCAACTTCTACATGGAGCTGCTGCGCGAGCGAGGCGAGCAGAAGCGCGACCAGGGCCTGTTCAGCCAGCGCAAGTCGCTGATCGAGCAGGAGCGGCACCGGCTCGGCAGCCTGCGCCAGTGCACGCAGCAGCAGGAGACGGAGGCGCGCAACAAGCTGCACCACTACGTCTGCTCGTTCTACAAGTTCGACGTGCTGGACGAGTCGGAGCTGAAGGAGGGTACGCCCGAGCCGGAGGTGGTGCCGCTGCCCGAGCTGACCCGGGAGCAGCTGGACGAGATGCAGCGCAACCG GCACCGGCCACCAGGTGGTGATGGAGAAGTTCAACCTGCGCATCACCGGCACGTACGCGCTCGGCACGGTCGGGTTTTGGGCGACCTCCTCCTTGAACGCTTCCACGAACCGCTCGGTCAGGGTGCGGAACTGCACCGAGGGCATCACCAGGATCGGTTGCTGCAGCCGGTCGCGCAGATCCTTGATGTGCACCACGTTGATGCGTATGATGAACGGCTTGATGCGGGACTGCTGCTGGGGCTTCACGCCGATATTGACGAACTCGGCCGACTCGAGCGTGTCGGTGATCACCTCCTTGGTGTCGATCTGCGGTGTGTGAGGCGAAACAGGGAGCGGAAATTAGAGATCGGGGACGGGACAGGAGGAACAGCATCCTACCACTCACCTTGTACGCGTACAGCAGTGCTTCACTCTGGGGGATGATATTGTGCACGTACATGTTCGTTTTAATGATCCAACTTTCCGTCACCACCAGGGTCGAGATAGCGTTGGAACGGATGATAATTTTGGTATCCCTGGTAAAAGAGAGCGA                                                                                                                             ]
[-] EMBL CNS08V1J             [                                                                                                                                         GCGGTGATCAACTTCTACATGGAGCT CT CGCGAGCGAGGCGAGCAGAAGCGCGACCAGGGCCTGTTCAGCCAGCGCAAGTCGCTGATCGAGCAGGAGCGGCACCGGCTCGGCAGCCTGCGCCAGTGCACGCAGCAGCAGGAGACGGAGGCGCGCAACAAGCTGCACCACTACGTCTGCTCGTTCTACAAGTTCGACGTGCTGGACGAGTCGGAGCTGAAGGAGGGTACGCCCGAGCCGGAGGTGGTGCCGCTGCCCGAGCTGACCCGGGAGCAGCTGGACGAGATGCAGCGCAAGTGCGCACCGGCCACCAGGTGGTGATGGAGAAGTTCAACCTGCGCATCACCGGCACGTACGCGCTCGGCACGGTCGGGTTTTGGGCGACCTCCTCCTTGAACGCTTCCACGAACCGCTCGGTCAGGGTGCGGAACTGCACCGAGGGCATCACCAGGATCGGTTGCTGCAGCCGGTCGCGCAGATCCTTGATGTGCACCACGTTGATGCGTATGATGAACGGCTTGATGCGGGACTGCTGCTGGGGCTTCACGCCGATATTGACGAACTCGGCCGACTCGAGCGTGTCGGTGATCACCTCCTTGGTGTCGATCTGCGGTGTGTGAGGCGAAACAGGGAGCGGAAATTAGAGATCGGGGACGGGACAGGAGGAACAGCATCCTACCACTCACCTTGTACGCGTACAGCAGTGCTTCACTCTGGGGGATGATATTGTGCACGTACATGTTCGTTTTAATGATCCAACTTTCCGTCACCACCAGGGTCGAGATAGCGTTGGAACGGATGATAATTTTGGTATCCCTGGTAAAAGAGAGCGAGCAGAACCGTTTGGATTGAATGGATAGAAAGAAGAAATGTGGGGAAAAAACTGCGAGAGTCCTCGGGGGGATACGTGTACGGTGTGCGCTAGCGAGAAGCAGTTGTTTATTTAATAATAAATATA]
[+] EMBL BX608329             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ACCACGTTGATGCGTATGATGAACGGCTTGATGCGGGACTGCTGCTGGGGCTTCACGCCGATATTGACGAACTCGGCCGACTCGAGCGGGTCGGTGATCACCTCCTTGGTGTCGATCTGCGGGGTGTTAGGCGAAACAGGGAGCGGAAATTAGAGATCGGGGACGGGACAGGAGGAACAGCATCCTACCACTCAC                                                                                                                                                                                                                                                                                ]


>consensus_8636#0 CGGTGCAGCGACCAGAAGCGGCAGAAGCGGAGAAGAAGCACGGTGCCTCGCTGGAACTGA CGGACGATGAGAAGTTCAACCTGCGCATCACCGGCAACGATCTCGTCACGCTGCAGGACA TGAACTGGCTGAACGATGCGGTGATCAACTTCTACATGGAGCTGCTGCGCGAGCGAGGCG AGCAGAAGCGCGACCAGGGCCTGTTCAGCCAGCGCAAGTCGCTGATCGAGCAGGAGCGGC ACCGGCTCGGCAGCCTGCGCCAGTGCACGCAGCAGCAGGAGACGGAGGCGCGCAACAAGC TGCACCACTACGTCTGCTCGTTCTACAAGTTCGACGTGCTGGACGAGTCGGAGCTGAAGG AGGGTACGCCCGAGCCGGAGGTGGTGCCGCTGCCCGAGCTGACCCGGGAGCAGCTGGACG AGATGCAGCGCAACCGGCACCGGCCACCAGGTGGTGATGGAGAAGTTCAACCTGCGCATC ACCGGCACGTACGCGCTCGGCACGGTCGGGTTTTGGGCGACCTCCTCCTTGAACGCTTCC ACGAACCGCTCGGTCAGGGTGCGGAACTGCACCGAGGGCATCACCAGGATCGGTTGCTGC AGCCGGTCGCGCAGATCCTTGATGTGCACCACGTTGATGCGTATGATGAACGGCTTGATG CGGGACTGCTGCTGGGGCTTCACGCCGATATTGACGAACTCGGCCGACTCGAGCGTGTCG GTGATCACCTCCTTGGTGTCGATCTGCGGTGTGTGAGGCGAAACAGGGAGCGGAAATTAG AGATCGGGGACGGGACAGGAGGAACAGCATCCTACCACTCACCTTGTACGCGTACAGCAG TGCTTCACTCTGGGGGATGATATTGTGCACGTACATGTTCGTTTTAATGATCCAACTTTC CGTCACCACCAGGGTCGAGATAGCGTTGGAACGGATGATAATTTTGGTATCCCTGGTAAA AGAGAGCGAGCAGAACCGTTTGGATTGAATGGATAGAAAGAAGAAATGTGGGGAAAAAAC TGCGAGAGTCCTCGGGGGGATACGTGTACGGTGTGCGCTAGCGAGAAGCAGTTGTTTATT TAATAATAAATATA



consensusID : consensus_8636#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 995
fasta sequence
                              [AGCCAGTCGCCCTCGTCCGGCACGTACGCGCTCGGCACGGTCGGGTTTTGGGCGACCTCCTCCTTGGAACGCTTCCACGAACCGCTCGGTCAAGGGTGCGGAACTGCACCGAGGGGCATCACCAGGATCGGTTGCTGCAGCCGGTCGCGCAGATCCTTGATGTGCACCACGTTGATGCGTATGATGAACGGCTTGATGCGGGACTGCTGCTGGGGCTTCACGCCGATATTGACGAACTCGGCCGACTCGAGGGTGTCGGTGATCACCTCCTTGGTGTCGATCTTGTACGCGTACAGCAGTGCTTCACTCTGGGGGATGATATTGTGCACGTACATGTTCGTTTTAATGATCCAACTTTCCGTCACCACCAAGGTCGAGATAGCGTTGGAACGGATGATAATTTTGGTATCCCTTCGATACTCGTCGTTGACGTTGGTGGCAACGGATCGCCAATCGGGCAGCGTGGCGCTGGTCAGCAGCTGCAGCTGCTTCGCGATCGGATGATTGCTCCAACCGTCCTGGGCCCAGTAGAAAACGGTCACAGCGGCCACAATCAACAGCGTGCCGGCAGCGCTACAGAACACATCCCAGACCGTTTCCCCCAACGGCGATGGTTGCCGCTGCACCACCATCATCTCGTCCGGGTTGGCCCACATCATCAGCCAGATGAAGAGGACGTAGATGAACGGCATGGCCGAGTGGATCAGCAGCTTCACGCTGGTCGATTTTAGCTGGTACATCACGTAGTCCGTGTCGGCGGACAGGTAGCGCGAGCAGAGATGGTCCACCGTCAGCCCGACCGATTCCATCTCGGCCGTCGGGAAGATGGTGAAGAAAAACAGCATCACAAAGATGATGCCGTAAATGATGTGCGGCACCATTGTGCTGTGGGGGAAGAGAAAAATATGAGGGTGTGGAGGAGGAATGGGATTGCAAAAAAAAAAAAAACTAAAGAACACAGCACGGGAACCGTGGCAAAACTGAAAGAAAAGGAC]

[-] EMBL BM577154             [AGCCAGTCGCCCTCGTCCGGCACGTACGCGCTCGGCACGGTCGGGTTTTGGGCGACCTCCTCCTTGGAACGCTTCCACGAACCGCTCGGTCAAGGGTGCGGAACTGCACCGAGGGGCATCACCAGGATCGGTTGCTGCAGCCGGTCGCGCAGATCCTTGATGTGCACCACGTTGATGCGTATGATGAACGGCTTGATGCGGGACTGCTGCTGGGGCTTCACGCCGATATTGACGAACTCGGCCGACTCGAGGGTGTCGGTGATCACCTCCTTGGTGTCGATCTTGTACGCGTACAGCAGTGCTTCACTCTGGGGGATGATATTGTGCACGTACATGTTCGTTTTAATGATCCAACTTTCCGTCACCACCAAGGTCGAGATAGCGTTGGAACGGATGATAATTTTGGTATCCCTTCGATACTCGTCGTTGACGTTGGTGGCAACGGATCGCCAATCGGGCAGCGTGGCGCTGGTCAGCAGCTGCAGCTGCTTCGCGATCGGATGATTGCTCCAACCGTCCTGGGCCCAGTAAAAAACGGTCACAGCGGCCACAATCAACAGCGTGCCGGCAGCGCTACAGAACACATCCCAGACCGTTTCCCCCAACGGCGATGGTTGCCGCTGCACCACCATCATCTCGTCCGGGTTGGCCCACATCATCcgg                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL BX614149             [                                                                                                                                CGGTTGCTGCAGCCGGTCGCGCAGATCCTTGATGTGCCCCACGTTGATGCGTATGATGAACGGCTTGATGCGGGACTGCTGCTGGGGCTTCCCGCCGATATTGACGAACTCGGCCGACTCGAGCGTGTCGGTGATCCCCTCCTTGGTGTCGTTCTTGTACGCGTACAGCAGTGCTTCACTCTGGGGGATGATATTGTGCACGTACATGTTCGTTTTAATGATCCAACTTTCCGTCACCACCAGGGTCGAGATAGCGTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL BX605564             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TGGGCCCAGTAGAAAACGGTCACAGCGGCCACAATCAACAGCGTGCCGGCAGCGCTACAGAACACATCCCAGACCGTTTCCCCCAACGGCGATGGTTGCCGCTGCACCACCATCATCTCGTCCGGGTTGGCCCACATCATCAGCCAGATGAAGAGGACGTAGATGAACGGCATGGCCGAGTGGATCAGCAGCTTCACGCTGGTCGATTTTAGCTGGTACATCACGTAGTCCGTGTCGGCGGACAGGTAGCGCGAGCAGAGATGGTCCACCGTCAGCCCGACCGATTCCATCTCGGCCGTCGGGAAGATGGTGAAGAAAAACAGCATCACAAAGATGATGCCGTAAATGATGTGCGGCACCATTGTGCTGTGGGGGAAGAGAAAAATATGAGGGTGTGGAGGAGGAATGGGATTGCAAAAAAAAAAAAAACTAAAGAACACAGCACGGGAACCGTGGCAAAACTGAAAGAAAAGGAC]
[-] EMBL BX624133             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CCAGTNGAAAACGGTCCCAGCGGCCACAATCAACAGCGTGCCGGCAGCGCTACAGANCACATCCCAGACCGTTTCCCCCAACGGNGATGGTTGCCGATGCACCACCATCATCTCGTCCGGGTTGGCCCNCATCATCAGCCAGATGAAGAGGACGTAGATGANCGGCATGGCCGAGTGGATCAGCAGCTTCACGCTGGTCGATTTTAGCTGGTACATCACGTAGTCCGTGTCGGCGGACAGGTAGCGCGAGCAGAGATGGTCCACCGTCAGCCCGACCGATTCCATCTCGGCCGTCGGGAAGATGGTGAAGAAAAACAGCATCACAAAGATGATGCCGTAAATGATGTGCGGCACCATTGTGCTGTGGGGGAAGAGAAAAATATGAGGGTGTGGAGGAGGAATGGGATTGCAAAAAAAAAAAAAACTAAAGAACGCAGCAC                               ]
[-] EMBL BX610098             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       CAGATGAAGAGGACGTAGATGAACGGCCTGGCCGAGTGGATCAGCAGCTTCCCGCTGGTCGATTTTAGCTGGTACATCACGTAGTCCGTGTCGGCGGACAGGTAGCGCGAGCAGAGATGGTCCCCCGTCCGCCCGACCGGTTCCATCTCGGCCGTCGGGAAG                                                                                                                                                                          ]


>consensus_8636#1 AGCCAGTCGCCCTCGTCCGGCACGTACGCGCTCGGCACGGTCGGGTTTTGGGCGACCTCC TCCTTGGAACGCTTCCACGAACCGCTCGGTCAAGGGTGCGGAACTGCACCGAGGGGCATC ACCAGGATCGGTTGCTGCAGCCGGTCGCGCAGATCCTTGATGTGCACCACGTTGATGCGT ATGATGAACGGCTTGATGCGGGACTGCTGCTGGGGCTTCACGCCGATATTGACGAACTCG GCCGACTCGAGGGTGTCGGTGATCACCTCCTTGGTGTCGATCTTGTACGCGTACAGCAGT GCTTCACTCTGGGGGATGATATTGTGCACGTACATGTTCGTTTTAATGATCCAACTTTCC GTCACCACCAAGGTCGAGATAGCGTTGGAACGGATGATAATTTTGGTATCCCTTCGATAC TCGTCGTTGACGTTGGTGGCAACGGATCGCCAATCGGGCAGCGTGGCGCTGGTCAGCAGC TGCAGCTGCTTCGCGATCGGATGATTGCTCCAACCGTCCTGGGCCCAGTAGAAAACGGTC ACAGCGGCCACAATCAACAGCGTGCCGGCAGCGCTACAGAACACATCCCAGACCGTTTCC CCCAACGGCGATGGTTGCCGCTGCACCACCATCATCTCGTCCGGGTTGGCCCACATCATC AGCCAGATGAAGAGGACGTAGATGAACGGCATGGCCGAGTGGATCAGCAGCTTCACGCTG GTCGATTTTAGCTGGTACATCACGTAGTCCGTGTCGGCGGACAGGTAGCGCGAGCAGAGA TGGTCCACCGTCAGCCCGACCGATTCCATCTCGGCCGTCGGGAAGATGGTGAAGAAAAAC AGCATCACAAAGATGATGCCGTAAATGATGTGCGGCACCATTGTGCTGTGGGGGAAGAGA AAAATATGAGGGTGTGGAGGAGGAATGGGATTGCAAAAAAAAAAAAAACTAAAGAACACA GCACGGGAACCGTGGCAAAACTGAAAGAAAAGGAC



consensusID : consensus_8636#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 774
fasta sequence
                              [CCTGGAGGGGAAAACAAAGACTCACGCTGTACAGTGTATACACATTTATTGCTCCGTCTCCGGCAGCACCTCCTCCTCCCCCTCCTGTGCGGGCGGCGTCCGGCGTCCCTCGAGATAGCACACATCGCGCACGCAAAACCGTGCCCGACACATCGGACAGGTCGTCTTCTTGCTGAGCCACGTGTCCCGCTCGGCCCGCTGCTGCTGCGACGCGAACCACGTCGCCAGACAGCTGACGCACCAGAGCGGCCGGCAGCCGCACGGCTGGCAGCGCTCCTGCTCGGGCAGTACCGAGCCGGCCGCGTCCACATCCAGACAGTACTTGGCAATCTTGACGTCCGGCTGGGCCTGCAGACACGCCAAGCAGCAGTCGCCCTCGTCCGGCACGTACGCGCTCGGCACGGTCGGGTTTTGGGCGACCTCCTCCTTGAACGCTTCCACGAACCGCTCGGTCAGGGTGCGGAACTGCACCGAGGGCATCACCAGGATCGGTTGCTGCAGCCGGTCGCGCAGATCCTTGATGTGCACCACGTTGATGCGTATGATGAACGGCTTGATGCGGGACTGCTGCTGGGGCTTCACGCCGATATTGACGAACTCGGCCGACTCGA-GCGTGTCGGTGATCA-CCTCCTTGGTGTCGATCTTGCGGTGTGTGAGGCGAAACAGGGAGTGGAAATTAGAAAAACGGGGACGGGACAGGAGGAGCAGCATCCTACCACTCACCTTGTACGCCGTACAGCAGTGCTTTCACTTCTGGGGGGATTATATTGTGCA]

[+] EMBL BX616334             [CCTGGAGGGGAAAACAAAGACTCACGCTGTACAGTGTATACACATTTATTGCTCCGTCTCCGGCAGCACCTCCTCCTCCCCCTCCTGTGCGGGCGGCGTCCGGCGTCCCTCGAGATAGCACACATCGCGCACGCAAAACCGTGCCCGACACATCGGACAGGTCGTCTTCTTGCTGAGCCACGTGTCCCGCTCGGCCCGCTGCTGCTGCGACGCGAACCACGTCGCCAGACAGCTGACGCACCAGAGCGGCCGGCAGCCGCACGGCTGGCAGCGCTCCTGCTCGGGCAGTACCGAGCCGGCCGCGTCCACATCCAGACAGTACTTGGCAATCTTGACGTCCGGCTGGGCCTGCAGACACGCCAAGCAGCAGTCGCCCTCGTCCGGCACGTACGCGCTCGGCACGGTCGGGTTTTGGGCGACCTCCTCCTTGAACGCTTCCACGAACCGCTCGGTCAGGGTGCGGAACTGCACCGAGGGCATCACCAGGATCGGTTGCTGCAGCCGGTCGCGCAGATCCTTGATGTGCACCACGTTGATGCGTATGATGAACGGCTTGATGCGGGACTGCTGCTGGGGCTTCACGCCGATATTGACGAACTCGGCCGACTCGA GCGTGTCGGTGATCA CCTCCTTGGTGTCGA                                                                                                                                     ]
[+] EMBL BM575521             [                                                                                                                                ccgCGCAAAACCGTGCCCGGCACATCGGACAGGTCGTCTTCTTGCTGAGCCACGTGTCCCGCTCGGCCCGCTGCTGCTGCGACGCGAACCACGTTGCCAGACAGCTGACGCACCAGAGCGGCCGGCAGCCGCACGGCTGGCAGCGCTCCTGCTCGGGCAGTACCGAGCCGGCCGCGTCCACATCCAGACAGTACTTGGCAATCTTGACGTCCGGCTGGGCCTGCAGGCACGCCAAGCAGCAGTCGCCGTCGTCCGGCACGTACGCGCTCGGCACGGTCGGGTTTTGGGCGACCTCCTCCTTGAACGCTTCCACGAACCGCTCGGTCAGGGTGCGGAACTGCACCGAGGGCATCACCAGGATCGGTTGCTGCAGCCGGTCGCGCAGATCCTTGATGTGCACCACGTTGATGCGTATGATGAACGGCTTGATGCGGGACTGCTGCTGGGGCTTCACGCCGATATTGACGAACTCGGCCGACTCGACGCGTGTCGGTGATCACCCTCCTTGGTGTCGATCTTGCGGTGTGTGAGGCGAAACAGGGAGTGGAAATTAGAAAAACGGGGACGGGACAGGAGGAGCAGCATCCTACCACTCACCTTGTACGCCGTACAGCAGTGCTTTCACTTCTGGGGGGATTATATTGTGCA]


>consensus_8636#2 CCTGGAGGGGAAAACAAAGACTCACGCTGTACAGTGTATACACATTTATTGCTCCGTCTC CGGCAGCACCTCCTCCTCCCCCTCCTGTGCGGGCGGCGTCCGGCGTCCCTCGAGATAGCA CACATCGCGCACGCAAAACCGTGCCCGACACATCGGACAGGTCGTCTTCTTGCTGAGCCA CGTGTCCCGCTCGGCCCGCTGCTGCTGCGACGCGAACCACGTCGCCAGACAGCTGACGCA CCAGAGCGGCCGGCAGCCGCACGGCTGGCAGCGCTCCTGCTCGGGCAGTACCGAGCCGGC CGCGTCCACATCCAGACAGTACTTGGCAATCTTGACGTCCGGCTGGGCCTGCAGACACGC CAAGCAGCAGTCGCCCTCGTCCGGCACGTACGCGCTCGGCACGGTCGGGTTTTGGGCGAC CTCCTCCTTGAACGCTTCCACGAACCGCTCGGTCAGGGTGCGGAACTGCACCGAGGGCAT CACCAGGATCGGTTGCTGCAGCCGGTCGCGCAGATCCTTGATGTGCACCACGTTGATGCG TATGATGAACGGCTTGATGCGGGACTGCTGCTGGGGCTTCACGCCGATATTGACGAACTC GGCCGACTCGAGCGTGTCGGTGATCACCTCCTTGGTGTCGATCTTGCGGTGTGTGAGGCG AAACAGGGAGTGGAAATTAGAAAAACGGGGACGGGACAGGAGGAGCAGCATCCTACCACT CACCTTGTACGCCGTACAGCAGTGCTTTCACTTCTGGGGGGATTATATTGTGCA



consensusID : consensus_8636#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 426
fasta sequence
                              [CCTCCTGCCCGAGCCGGTCAACTCCGTCCGGGCGCGGTTCGAGACGAAGCACGTGTTCCGGGACGACATCATACAGGACGTGCAGGCGCGGTACGGCAGCCTGTTCAGCCAGCGCAAGTCGCTGATCGAGCAGGAGCGGCACCGGCTCGGCAGCCTGCGCCAGTGCACGCAGCAGCAGGAGACGGAGGCGCGCAACAAGCTGCACCACTACGTCTGCTCCTTCTACAAGTTCGACGTGCTGGACGAGTCGGAGCTGAAGGAGGGTACGCCCGAGCCGGAGGTGGTGCCGCTGCCCGAGCTGACCCGGGAGCAGCTTGGACGAGATGCAGCGCAAGCTGCGCACCGGCCACCAGGTGGTGATGGAGAAGTTCAACCTGCGCATCACCGGCAACGATCTCGTCACGCTGCAGGACATGAACTGGCTGA]

[+] EMBL AGA283834            [CCTCCTGCCCGAGCCGGTCAACTCCGTCCGGGCGCGGTTCGAGACGAAGCACGTGTTCCGGGACGACATCATACAGGACGTGCAGGCGCGGTACGGCAGCCTGTTCAGCCAGCGCAAGTCGCTGATCGAGCAGGAGCGGCACCGGCTCGGCAGCCTGCGCCAGTGCACGCAGCAGCAGGAGACGGAGGCGCGCAACAAGCTGCACCACTACGTCTGCTCCTTCTACAAGTTCGACGTGCTGGACGAGTCGGAGCTGAAGGAGGGTACGCCCGAGCCGGAGGTGGTGCCGCTGCCCGAGCTGACCCGGGAGCAGCTTGGACGAGATGCAGCGCAAGCTGCGCACCGGCCACCAGGTGGTGATGGAGAAGTTCAACCTGCGCATCACCGGCAACGATCTCGTCACGCTGCAGGACATGAACTGGCTGA]


>consensus_8636#3 CCTCCTGCCCGAGCCGGTCAACTCCGTCCGGGCGCGGTTCGAGACGAAGCACGTGTTCCG GGACGACATCATACAGGACGTGCAGGCGCGGTACGGCAGCCTGTTCAGCCAGCGCAAGTC GCTGATCGAGCAGGAGCGGCACCGGCTCGGCAGCCTGCGCCAGTGCACGCAGCAGCAGGA GACGGAGGCGCGCAACAAGCTGCACCACTACGTCTGCTCCTTCTACAAGTTCGACGTGCT GGACGAGTCGGAGCTGAAGGAGGGTACGCCCGAGCCGGAGGTGGTGCCGCTGCCCGAGCT GACCCGGGAGCAGCTTGGACGAGATGCAGCGCAAGCTGCGCACCGGCCACCAGGTGGTGA TGGAGAAGTTCAACCTGCGCATCACCGGCAACGATCTCGTCACGCTGCAGGACATGAACT GGCTGA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8636#0      ------------------------------CGGTGCAGCGACCAGAAGCGGCAGAAGCGG 30
consensus_8636#3      ------------------------------------------------------------
consensus_8636#1      AGCCAGTCGCCCTCGTCCGGCACGTACGCGCTCGGCACGGTCGGGTTTTGGGCGACCTCC 60
consensus_8636#2      ------------------------------------------------------------
                                                                                  

consensus_8636#0      AGAAGAAGCACGGTGCCTCGCTGGAACTGACGGACGATGAGAAGTTCAACCTGCGCATCA 90
consensus_8636#3      ------------------------------------------------------------
consensus_8636#1      TCCTTGGAACGCTTCCACGAACCGCTCGGTCAAGGGTGCGGAACTGCACCGAGGGGCATC 120
consensus_8636#2      ------------------------------------------------------------
                                                                                  

consensus_8636#0      CCGGCAACGATCTCGTCACGCTGCAGGACATGAACTGGCTGAACGATGCGGTGATCAACT 150
consensus_8636#3      -------CCTCCTGCCCGAGCCGGTCAACTCCGTCCGGGCG--CGGTTCGAGACGAAGCA 51
consensus_8636#1      ACCAGGATCGGTTGCTGCAGCCGGTCGCGCAGATCCTTGAT----GTGCACCACGTTG-A 175
consensus_8636#2      -------------CCTGGAGGGGAAAACAAAGACTCACGCT----GTACA--GTGTAT-A 40
                                         *  *                       * *           

consensus_8636#0      TCTACATGGAGCTGCTGCGCGAGCGAGGCGAGCAGAAGCGCGACCAGGGCCTGTTCAGCC 210
consensus_8636#3      CGTGTTCCGGGACGACAT-CATACAGGACGTGCAGGCGCGGTACGGCAGCCTGTTCAGCC 110
consensus_8636#1      TGCGTATGATGAACGGCTTGATGCGGGAC-TGCTGCTGGGGCTTCAC-GCCGATATTGAC 233
consensus_8636#2      CACATTTATTGCTCCGTCTCCGGCAGCAC-CTCCTCC----TCCCCC-TCCTGTGCGGGC 94
                                *            *    *   *                **  *   * *

consensus_8636#0      AGCGCAAGTCGCTGATCGAG-CAGGAGCGG-CACCGGCTCGGCAGCCTGCGCCAGTGCAC 268
consensus_8636#3      AGCGCAAGTCGCTGATCGAG-CAGGAGCGG-CACCGGCTCGGCAGCCTGCGCCAGTGCAC 168
consensus_8636#1      GAACTCGGCCGACTCGAGGG-TGTCGGTGATCACCTCCTTGGTGTCGATCTTGTACGCGT 292
consensus_8636#2      GGCGTCCGGCGTCCCTCGAGATAGCACACATCGCGCACGCAAAACCGTGCCCG-ACACAT 153
                             * **      * *           * *   *       *   *       *  

consensus_8636#0      GCAGCAGCAGGAGACGGAGGCGCGCAACAAGCTGCACCACTACGTCTGCTCGTTCTA--C 326
consensus_8636#3      GCAGCAGCAGGAGACGGAGGCGCGCAACAAGCTGCACCACTACGTCTGCTCCTTCTA--C 226
consensus_8636#1      ACAGCAGTGCTTCACTCTGGGGGATGATATTGTGCACGTACATGTTCGTTTTAATGATCC 352
consensus_8636#2      CGGACAGGTCGTCTTCTTGCTGAGCCACGTGTCCCGCTCGGCCCGCTGCTGCTGCGACGC 213
                          ***           *  *    *       * *          * *      *  *

consensus_8636#0      AAGT-----TCGACGTGCTGGACGAGTCGGAGCTGAA--GGAGGGTACGCCCGAGCCGGA 379
consensus_8636#3      AAGT-----TCGACGTGCTGGACGAGTCGGAGCTGAA--GGAGGGTACGCCCGAGCCGGA 279
consensus_8636#1      AACTTTCCGTCACCACCAAGGTCGAGATAGCGTTGGAACGGATGATAATTTTGGTATCCC 412
consensus_8636#2      GAACCAC-GTCGCCAG-ACAGCTGAC---GCACCAGAGCGGCCGGCAGCCGCACGG--CT 266
                       *       **  *      *  **    *      *  **  *  *             

consensus_8636#0      GGTGGTGCCGCTGCCCGA----GCTGACCCGGGAGCAGCT-GGACGAGA-TGCAGCGCAA 433
consensus_8636#3      GGTGGTGCCGCTGCCCGA----GCTGACCCGGGAGCAGCTTGGACGAGA-TGCAGCGCAA 334
consensus_8636#1      TTCGATACTCGTCGTTGACGTTGGTGGCAACGGATCG-CCAATCGGGCAGCGTGGCGCTG 471
consensus_8636#2      GGCAGCGCTCCTGCTCG-----GGCAGTACCGAGCCGGCCGCGTCCACATCCAGACAGTA 321
                             *   *    *     *        *   *  *         *      *    

consensus_8636#0      CCGGC--AC--CGGCCACCAGGTGGTGATGGAGAAGTTCAACCTGCGCATCACC------ 483
consensus_8636#3      GCTGCGCAC--CGGCCACCAGGTGGTGATGGAGAAGTTCAACCTGCGCATCACC------ 386
consensus_8636#1      GTCAGCAGCTGCAGCTGCTTCGCGATCGGATGATTGCTCCAACCGTCC-TGGGCCCAGTA 530
consensus_8636#2      CTTGGCAATCTTGACGTCCGGCTGGGCCTGCAGACACGCCAAGCAGCAGTCGCCCTCGTC 381
                                    *  *     *              * *        *   *      

consensus_8636#0      -GGCACGTACGCGCTCGGCACGGT-CGGGTTTTGGGCGACCTCCTCCTTGAACGCTTCCA 541
consensus_8636#3      -GGCA---ACGATCTCGTCACGCTGCAGGACATGAACTGGCTGA---------------- 426
consensus_8636#1      GAAAACGGTCACAGCGGCCACAAT-CAACAGCGTGCCGGCAGCGCTACAGAACACATCC- 588
consensus_8636#2      CGGCACGTACGCGCTCGGCACGGT-CGGGTTTTGGGCGACCTCCTCCTTGAACGCTTCCA 440
                          *    *      * ***  * *          *                       

consensus_8636#0      CGAACCGCT--------CGGTCAGGGTGCGGAACTGCACCGAGGGCATCAC--CAGGATC 591
consensus_8636#3      ------------------------------------------------------------
consensus_8636#1      CAGACCGTTTCCCCCAACGGCGATGGT-TGCCGCTGCACCACCATCATCTCGTCCGGGTT 647
consensus_8636#2      CGAACCGCT--------CGGTCAGGGTGCGGAACTGCACCGAGGGCATCAC--CAGGATC 490
                                                                                  

consensus_8636#0      GGTTGCTG----CAGCCGGTCGCGCAGATCCTTGATGTGCACCACGTTGATGCGTATGAT 647
consensus_8636#3      ------------------------------------------------------------
consensus_8636#1      GGCCCACATCATCAGCCAGATGAAGAGGACGTAGATGAACGGCATGGCCGAGTGGATCAG 707
consensus_8636#2      GGTTGCTG----CAGCCGGTCGCGCAGATCCTTGATGTGCACCACGTTGATGCGTATGAT 546
                                                                                  

consensus_8636#0      GAACGGCTTGATGCGGGACTGCTGCTGGGGCTTCAC---GCCGATATTGACGAAC---TC 701
consensus_8636#3      ------------------------------------------------------------
consensus_8636#1      CAGCTTCACGCTGGTCGATTTTAGCTGGTACATCACGTAGTCCGTGTCGGCGGACAGGTA 767
consensus_8636#2      GAACGGCTTGATGCGGGACTGCTGCTGGGGCTTCAC---GCCGATATTGACGAAC---TC 600
                                                                                  

consensus_8636#0      GGCCGACTCGAGCGTGTCGGTGATCACCTCCTTGGTGTCGATCTGCGGTGTGTGAGGCGA 761
consensus_8636#3      ------------------------------------------------------------
consensus_8636#1      GCGCGAGCAGAGATGGTCCACCGTCAGCCCGACCGATTCCATCTCGGCCGTCGGGAAGAT 827
consensus_8636#2      GGCCGACTCGAGCGTGTCGGTGATCACCTCCTTGGTGTCGATCTTG-CGGTGTGTGAGGC 659
                                                                                  

consensus_8636#0      AACAGGGAGCGGAAATTAGAGATCGGGGACGGGACAGGAGGAACAGCATCCTACCACTCA 821
consensus_8636#3      ------------------------------------------------------------
consensus_8636#1      GGTGAAGAAAAACAGCATCACAAAGATGATGCCGTAA-ATGATGTGCGGCACCATTGTGC 886
consensus_8636#2      GAAACAGGGAGTGGAAATTAGAAAAACGGGGACGGGACAGGAGGAGCAGCATCCTACCAC 719
                                                                                  

consensus_8636#0      CCTTGTACGCGTACAGCAGTGCTTCACTCTGGGGGATGATATTGTGCACGTACATGTTCG 881
consensus_8636#3      ------------------------------------------------------------
consensus_8636#1      TGTGGGGGAAGAGAAAAATATGAGGGTGTGGAGGAGGAATGGGATTGCAAAAAAAAAAAA 946
consensus_8636#2      T-CACCTTGTACGCCGTACAGCAGTGCTTTCACTTCTGGGGGGATTATATTGTGCA---- 774
                                                                                  

consensus_8636#0      TTTTAATGATCCAACTTTCCGTCACCACCAGGGTCGAGATAGCGTTGGAACGGATGATAA 941
consensus_8636#3      ------------------------------------------------------------
consensus_8636#1      AACTAAAGAACACAGCACGGGAACCGTGGCAAAACTGAAAGAAAAGGAC----------- 995
consensus_8636#2      ------------------------------------------------------------
                                                                                  

consensus_8636#0      TTTTGGTATCCCTGGTAAAAGAGAGCGAGCAGAACCGTTTGGATTGAATGGATAGAAAGA 1001
consensus_8636#3      ------------------------------------------------------------
consensus_8636#1      ------------------------------------------------------------
consensus_8636#2      ------------------------------------------------------------
                                                                                  

consensus_8636#0      AGAAATGTGGGGAAAAAACTGCGAGAGTCCTCGGGGGGATACGTGTACGGTGTGCGCTAG 1061
consensus_8636#3      ------------------------------------------------------------
consensus_8636#1      ------------------------------------------------------------
consensus_8636#2      ------------------------------------------------------------
                                                                                  

consensus_8636#0      CGAGAAGCAGTTGTTTATTTAATAATAAATATA 1094
consensus_8636#3      ---------------------------------
consensus_8636#1      ---------------------------------
consensus_8636#2      ---------------------------------
                                                       




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)