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Anopheles gambiae
cluster # 8639 cluster # 8639       Sequences # 11       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8639#0 length = 1074 sequences # 8  
consensus_8639#1 length = 674 sequences # 1  
consensus_8639#2 length = 545 sequences # 1  
consensus_8639#3 length = 539 sequences # 1  

consensusID : consensus_8639#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1074
fasta sequence
                              [CGTGTCCATCATTCACTAGGAGACTGATTGGCCCTGATGCGTCTGCTTCTAGAAGCTATTGTCGACAAGGAAGTACCAT-CGCGCTGGAAGCATCTGTCCAAGCTAAAGGTGATGAACATCGACTACATCCTGAAAGAACAGAAAGCCTCCGATCATCACCATTTGACCATAGGCGAAACAATGCTCCAGCGCATATGGAAAAGAATTCCCTCTCTCAACGAGCTAGCAACGCAACGGGACCACATTTTGCGAATCCTTTGGACCATCTACACTGCACCCGCCTTCTTTCATGATGTATCTAGACGTCAGGTCGATAACAACTGCATCCACGCTTCACAAATGGCCAACGAGAAGGTGGTCAGCTGGATACACGAGGATCACAACCGTGATACACGCTGGGTT-GAGATTATCAAGCGCACTAAACGGCTTCTGCCTGGAACGCGGTTCTCGGACGT-TTTCCTCACTGCACTTTCCTCCAGTTTGGAAACATTC-TTTGCCAGCAAAAATGGTACATCGCCAAAAAACCTCACAGTCGTGCTTCCTGCAAGGATCGAGAAAGAGTCTCCTCACTTAAAGCTACACAATCG-CTTTTCGGTAGCTCTGCAAACGCTACCAATTACTCCCGGTATACAGATGAACGACACCAATAGGCATTATGCACTCACTAAGCGTATTTTGGCGGTTAATAGTTATTCCGATGTATTGCGTTCTTCGTCCGACTATTTGATTAACTATTGGATCATGTCTAAAATGACTTGTCTCTTTCCGGAGACCATACTAAGGAAGATTCTCAAAAGCGCACACAGCACGCTGGCGATCTCGAATCTACCGGGACCGCAGCAGATGCCCCGTATTCAAGGCAGAGAGCTGAAGAATCTCTGCTTTTTCATTCCCAATCTGGGCACCACTGCCGTTGGAATTACGCTTCTTACGTACGGNGGNAAACTGCAGCTGGGCATACTAGCCGATCGTGCGGTCATTCGCACAGAAGACGAAGNCCACAGCATTCTCCGTGGAACGATCGAGGAGATTGAACGTATGGGGCCAGTTATTAGAAGAAGTTTGATTAACTAA]

[+] EMBL BX609214             [CGTGTCCATCATTCACTAGGAGACTGATTGGCCCTGATGCGTCTGCTTCTAGAAGCTATTGTCGACAAGGAAGTACCAT CGCGCTGGAAGCATCTGTCCAAGCTAAAGGTGATGAACATCGACTACATCCTGAAAGAACAGAAAGCCTCCGATCATCACCATTTGACCATAGGCGAAACAATGCTCCAGCGCATATGGAAAAGAATTCCCTCTCTCAACGAGCTAGCAACGCAACGGGACCACATTTTGCGAATCCTTTGGACCATCTACACTGCACCCGCCTTCTTTCATGATGTATCTAGACGTCAGGTCGATAACAACTGCATCCACGCTTCACAAATGGCCAACGAGAAGGTGGTCAGCTGGATACACGAGGATCACAACCGTGATACACGCTGCGTT GAGATTATCAAGCGCACTAAACGGCTTCTGCCTGGAACGCGGTTCTCGGACGT TTTCCTCACTGCACTTTCCTCCAGTTTGGAAACATTC TTTGCCAGCAAAAATGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL BX615390             [                                     TGCGTCTGCTTCTAGAAGCTATTGTCGACAAGGAAGTACCAT CGCGCTGTAAGCATCTGTCCAAGCTAAAGGTGATGAACATCGACTACATCCTGAAAGAACAGAAAGCCTCCGATCATCACCATTTGACCATAGGCGAAACAATGCTCCAGCGCATATGGAAAAGAATTCCCTCTCTCAACGAGCTAGCAACGCAACGGGACCACATTTTGCGAATCCTTTGGACCATCTACACTGCACCCGCCTTCTTTCATGATGTATCTAGACGTCAGGTCGATAACAACTGCATCCACGCTTCACAAATGGCCAACGAGAAGGTGGTCAGCTGGATACACGAGGATCACAACCGTGATACACGCTGGGTT GAGATTATCAAGCGCACTAAACGGCTTCTGCCTGGAACGCGGTTCTCGGACGT TTTCCTCACTGCACTTTCCTCCAGTTTGGAAACATTC TTTGCCAGCAAAAATGGTACATCGCCAAAAAACCTCACAGTCGTGCTTCCTGCAAGGATCGAGAAAGAGTCTCCTCACTTAAAGCTACACAATCG CTTTTCGGTAGCTCTGCAAACGCTACCAATTACTCCCGGTATACAGATGAACGACA                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL BX623718             [                                                                     GAAGTACCAT CGCGCTGGAAGCATCTGTCCAAGCTAAAGGTGATGAACATCGACTACATCCTGAAAGAACAGAAAGCCTCCGATCATCACCATTTGACCATAGGCGAAACAATGCTCCAGCGCATATGGAAAAGAATTCCCTCTCTCAACGAGCTAGCAACGCAACGGGACCACATTTTGCGAATCCTTTGGACCATCTACACTGCACCCGCCTTCTTTCATGATGTATCTAGACGTCAGGTCGATAACAACTGCATCCACGCTTCACAAATGGCCAACGAGAAGGTGGTCAGCTGGATACACGAGGATCACAACCGTGATACACGCTGGGTT GAGATTATCAAGCGCACTAAACGGCTTCTGCCTGGAACGCGGTTCTCGGACGT TTTCCTCACTGCACTTTCCTCCAGTTTGGAAACATTC TTTGCCAGCAAAAATGGTACATCGCCAAAAAACCTCACAGTCGTGCTTCCTGCAAGGATCGAGAAAGAGTCTCCTCACTTAAAGCTACACAATCG CTTTTCGGTAGCTCTGCAAACGCTACCAATTACTCCCGGTATACAGATGAACGACACCAATAGGCATTATGCACTCACTAAGCGTATTTTGGCGGTTAATAGTTATTCCGATGTATTGCGTTCTTCGTCCGACTATTTGATTAACTATTGGATCATGTCTAAAATGACTTGTCTCTTTCCGGAGACCATACTAAGGAAGATTCTCAAAAGCGCACACAGCACGCTGGCGATCTCGAATCTACCGGGACCGCAGCAGATGCCCC                                                                                                                                                                                                                                ]
[+] EMBL BX624304             [                                                                         acaCATACGCGCTGGAAGCATCTGTCCAAGCTAAAGGTGATGAACATCGACTACATCCTGAAAGAACAGAAAGCCTCCGATCATCACCATTTGACTATAGGCGAAACAATGCTCCAGCGCATATGGAAAAGAATTCCCTCTCTCACCGATCTAGCAAAGCAACGGGACCACATTTTGCGAATCCTTTGGACCATCTACACTGCACCCGCCTTCTTTCATGATGTATCTAGACGTCAGGTCGATAACAACTGCATCCACGCTTCACAAATGGCCAACGAGAAGGTGGTCAGCTGGATACACGAGGATCACAACCGTGATACACGCTGGGTTGGAGATTATCAAGCGCACTAAACGGCTTCTGCCTGGANCGCGGTTCTCGGACGTNTTTCCTCACTGCACNNNCCTCCAGTTTGGAAACATTCTTTTGCCAGCNAAAATNGTACATCNCCAAAAAACCTCACANNCGTGCTCCCTGCAAGGATCCANAANGANTCTCCTCACTTAAAGCTACATAATCGCCTTTTCGGTANCTCTGCNAACGCTACCAATTACCCCCCGTAT                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL BX615899             [                                                                                                  CCAAGCTAAAGGTGATGAACATCGACTACATCCTGAAAGAACAGAAAGCCTCCGATCATCACCATTTGACCATAGGCGAAACAATGCTCCAGCGCATATGGAAAAGAATTCCCTCTCTCAACGAGCTAGCAACGCAACGGGACCACATTTTGCGAATCCTTTGGACCATCTACACTGCACCCGCCTTCTTTCATGATGTATCTAGACGTCAGGTCGATAACAACTGCATCCACGCTTCACAAATGGCCAACGAGAAGGTGGTCAGCTGGATACACGAGGATCACAACCGTGATACACGCTGGGTT GAGATTATCAAGCGCACTAAACGGCTTCTGCCTGGAACGCGGTTCTCGGACGT TTTCCTCACTGCACTTTCCTCCAGTTTGGAAACATTC TTTGCCAGCAAAAATGGTACATCGCCAAAAAACCTCACAGTCGTGCTTCCTGCAAGGATCGAGAAAGAGTCTCCTCACTTAAAGCTACACAATCG CTTTTCGGTAGCTCTGCAAACGCTACCAATTACTCCCGGTATACAGATGAACGACACCAATAGGCATTATGCACTCACTAAGCGTATTTTGGCGGTTAATAGTTATTCCGATGTATTGCGTTCTTCGTCCGACTATTTGATTAACTATTGGATCATGTCTAAAATGACTT                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL BX612874             [                                                                                                                                                                                                       AAAAGAATTCCCTCTCTCAACGAGCTAGCAACGCAACGGGACCACATTTTGCGAATCCTTTGGACCATCTACACTGCACCCGCCTTCTTTCATGATGTATCTAGACGTCAGGTCGATAACAACTGCATCCACGCTTCACAAATGGCCAACGAGAAGGTGGTCAGCTGGATACACGAGGATCACAACCGTGATACACGCTGGGTT GAGATTATCAAGCGCACTAAACGGCTTCTGCCTGGAACGCGGTTCTCGGACGT TTTCCTCACTGCACTTTCCTCCAGTTTGGAAACATTC TTTGCCAGCAAAAATGGTACATCGCCAAAAAACCTCACAGTCGTGCTTCCTGCAAGGATCGAGAAAGAGTCTCCTCACTTAAAGCTACACAATCG CTTTTCGGTAGCTCTGCAAACGCTACCAATTACTCCCGGTATACAGATGAACGACACCAATAGGCATTATGCACTCACTAAGCGTATTTTGGCGGTTAATAGTTATTCCGATGTATTGCGTTCTTCGTCCGACTATTTGATTAACTATTGGATCATGTCTAAAATGACTTGTCTCTTTCCGGAGACCATACTAAGGAAGATTCTCAAAAGCGCACACAGCACGCTGGCGATCTCGAATC                                                                                                                                                                                                                                                        ]
[+] EMBL BX627133             [                                                                                                                                                                                                                                                                                                                                                                           CTGGATACACGAGGATCACAACCGTGATACACGCTGGGTT GAGATTATCAAGCGCACTAAACGGCTTCTGCCTGGAACGCGGNTCTCGGACGT TTTCCTCACTGCACTTTCCTCCAGTTTGGAAACATTC TTTGCCAGCAAAAATGGTACATCGCCAAAAAACCTCACAGTCGTGCTTCCTGCAAGGATCGAGAAAGAGTCTCCTCACTTAAAGCTACACAATCG CTTTTCGGTAGCTCTGCAAACGCTACCAATTACTCCCGGTATACAGATGAACGACACCAATAGGCATTATGCACTCACTAAGCGTATTTTGGCGGTTAATAGTTATTCCGATGTATTGCGTTCTTCGTCCGACTATTTGATTAACTATTGGATCATGTCTAAAATGACTTGTCTCTTTCCGGAGACCATACTAAGGAAGATTCTCAAAAGCGCACACAGCACGCTGGCGATCTCGAATCTACCGGGACCGCAGCAGATGCCCCGTATTCAAGGCAGAGAGCTGAAGAATCTCTGCTTTTTCATTCCCAATCTGGGCACCACTGCCGTTGGAATTACGCTTCTTACGTACGGNGGNAAACTGCAGCTGGGCATACTAGCCGATCGTGCGGTCATTCGCACAGAAGACGAAGNCCACAGCATTCTCCGTGGAACGATCGAGGAGATTGAACGTATGGGGCCAGTTA                       ]
[+] EMBL BX615161             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    GACACCAATAGGCATTATGCACTCACTAAGCGTA TTTGGCGGTTAATAGTTATTCCGAAGTATTGCGTTCTTCGTCCGACTATTTGATTAACTATTGGATCATGTCTAAAATGACTTGTCTCTTTCCGGAGACCATACTAAGGAAGAATCTCAAAAGCGCACACAGCACGCTGGCGATCTCGAATCTACCGGGACCGCAGCAGAAGCCCCGTATTCAAGGCAGAGAGCTGAAGAATCTCTGCTTTTTCATTCCCAATCTGGGCACCACTGCCGTTGGAATTACGCTTCTTACGTACGGGGGTAAACTGCAGCTGGGCATACTAGCCGATCGTGCGGTCATTCGCACAGAAGACGAAGCCCACAGCATTCTCCGTGGAACGATCGAGGAGAATGAACGTAT GGGCCAGTTATTAGAAGAAGTTTGATTAACTAA]


>consensus_8639#0 CGTGTCCATCATTCACTAGGAGACTGATTGGCCCTGATGCGTCTGCTTCTAGAAGCTATT GTCGACAAGGAAGTACCATCGCGCTGGAAGCATCTGTCCAAGCTAAAGGTGATGAACATC GACTACATCCTGAAAGAACAGAAAGCCTCCGATCATCACCATTTGACCATAGGCGAAACA ATGCTCCAGCGCATATGGAAAAGAATTCCCTCTCTCAACGAGCTAGCAACGCAACGGGAC CACATTTTGCGAATCCTTTGGACCATCTACACTGCACCCGCCTTCTTTCATGATGTATCT AGACGTCAGGTCGATAACAACTGCATCCACGCTTCACAAATGGCCAACGAGAAGGTGGTC AGCTGGATACACGAGGATCACAACCGTGATACACGCTGGGTTGAGATTATCAAGCGCACT AAACGGCTTCTGCCTGGAACGCGGTTCTCGGACGTTTTCCTCACTGCACTTTCCTCCAGT TTGGAAACATTCTTTGCCAGCAAAAATGGTACATCGCCAAAAAACCTCACAGTCGTGCTT CCTGCAAGGATCGAGAAAGAGTCTCCTCACTTAAAGCTACACAATCGCTTTTCGGTAGCT CTGCAAACGCTACCAATTACTCCCGGTATACAGATGAACGACACCAATAGGCATTATGCA CTCACTAAGCGTATTTTGGCGGTTAATAGTTATTCCGATGTATTGCGTTCTTCGTCCGAC TATTTGATTAACTATTGGATCATGTCTAAAATGACTTGTCTCTTTCCGGAGACCATACTA AGGAAGATTCTCAAAAGCGCACACAGCACGCTGGCGATCTCGAATCTACCGGGACCGCAG CAGATGCCCCGTATTCAAGGCAGAGAGCTGAAGAATCTCTGCTTTTTCATTCCCAATCTG GGCACCACTGCCGTTGGAATTACGCTTCTTACGTACGGNGGNAAACTGCAGCTGGGCATA CTAGCCGATCGTGCGGTCATTCGCACAGAAGACGAAGNCCACAGCATTCTCCGTGGAACG ATCGAGGAGATTGAACGTATGGGGCCAGTTATTAGAAGAAGTTTGATTAACTAA



consensusID : consensus_8639#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 674
fasta sequence
                              [TGCCNCAGGCAGAATCGCCCGAGGTTCACTTACAGCTACACAATCGCTTTTCGGTAGCTCTGCAAACGCTACCAATTACTTCCGGTATACAGATGAACGACACCAATAGGCATTATGCACTCACTAAGCGTATTTTGGCAGTTAATAGTTATTCCGATGTATTGCGTTCTTCGTCCGACTATTTGATTAACTATTGGATCATGTCTAAAATGACTTGTCTCTTTCCGGAGACCATACTAAGGAAGATTCTCAAAAGCGCACACAGCACGCTGGCGATCTCGAATCTACCGGGACCGCAGCAGATGCCCCGTATTCAAGGCAGAGAGCTGAAGAATCTCTGCTTTTTCATTCCCAATCTGGGCACCACTGCCGTTGGNAATTACGCTTCTTACGTACGGTGGTAAGCTGCAGCTGGGTATACTAGCCGATCGTGCGGTCATTCGCACAGAAGACGAAGCCCACAGCATTCTCCGTGGAACGATCGAGGNAATTTGAACGTATGGGCCAGTATTACATGAAAGCTCTCTGATATACACTACCACTTGCTGAATCTAAATCCCGCACCCTATATNCTCTCCGCTACAACAANTATACCCACATAAATNTTAATNAAAACACNACCACACNNCACAANCACAACACAGGCATGCTCGCCGCCCGCACCCTTATTCCCC]

[+] EMBL AL934542             [TGCCNCAGGCAGAATCGCCCGAGGTTCACTTACAGCTACACAATCGCTTTTCGGTAGCTCTGCAAACGCTACCAATTACTTCCGGTATACAGATGAACGACACCAATAGGCATTATGCACTCACTAAGCGTATTTTGGCAGTTAATAGTTATTCCGATGTATTGCGTTCTTCGTCCGACTATTTGATTAACTATTGGATCATGTCTAAAATGACTTGTCTCTTTCCGGAGACCATACTAAGGAAGATTCTCAAAAGCGCACACAGCACGCTGGCGATCTCGAATCTACCGGGACCGCAGCAGATGCCCCGTATTCAAGGCAGAGAGCTGAAGAATCTCTGCTTTTTCATTCCCAATCTGGGCACCACTGCCGTTGGNAATTACGCTTCTTACGTACGGTGGTAAGCTGCAGCTGGGTATACTAGCCGATCGTGCGGTCATTCGCACAGAAGACGAAGCCCACAGCATTCTCCGTGGAACGATCGAGGNAATTTGAACGTATGGGCCAGTATTACATGAAAGCTCTCTGATATACACTACCACTTGCTGAATCTAAATCCCGCACCCTATATNCTCTCCGCTACAACAANTATACCCACATAAATNTTAATNAAAACACNACCACACNNCACAANCACAACACAGGCATGCTCGCCGCCCGCACCCTTATTCCCC]


>consensus_8639#1 TGCCNCAGGCAGAATCGCCCGAGGTTCACTTACAGCTACACAATCGCTTTTCGGTAGCTC TGCAAACGCTACCAATTACTTCCGGTATACAGATGAACGACACCAATAGGCATTATGCAC TCACTAAGCGTATTTTGGCAGTTAATAGTTATTCCGATGTATTGCGTTCTTCGTCCGACT ATTTGATTAACTATTGGATCATGTCTAAAATGACTTGTCTCTTTCCGGAGACCATACTAA GGAAGATTCTCAAAAGCGCACACAGCACGCTGGCGATCTCGAATCTACCGGGACCGCAGC AGATGCCCCGTATTCAAGGCAGAGAGCTGAAGAATCTCTGCTTTTTCATTCCCAATCTGG GCACCACTGCCGTTGGNAATTACGCTTCTTACGTACGGTGGTAAGCTGCAGCTGGGTATA CTAGCCGATCGTGCGGTCATTCGCACAGAAGACGAAGCCCACAGCATTCTCCGTGGAACG ATCGAGGNAATTTGAACGTATGGGCCAGTATTACATGAAAGCTCTCTGATATACACTACC ACTTGCTGAATCTAAATCCCGCACCCTATATNCTCTCCGCTACAACAANTATACCCACAT AAATNTTAATNAAAACACNACCACACNNCACAANCACAACACAGGCATGCTCGCCGCCCG CACCCTTATTCCCC



consensusID : consensus_8639#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 545
fasta sequence
                              [CAGAATTCCGAGTTAAAAACTCACAGTCGTGCTTCCTGCAGGATCGAGAAAGAGTCTCCTCACTTAAGCTACACAATCGCTTTTCGGTAGCTCTGCAAACGCTACCAATTACTCCCGGTATACAGATGAACGACACCAATAGGCATTATGCACTCACTAAGCGTATTTTGGCGGTTNATAGTTATTCCGATGTATTGCGTTCTTCGTCCGACTATTTGATTAACTATTGGATCATGTCTAAAATGACTTGTCTCTTTCCGGAGACCATACTAAGGAAGATTCTCAAAAGCGCACACAGACGCTGGCGATCTCGAATCTACCGGGACCGCAGAGATGCCCCGTATTCAAGGCAGAGAGCTGAAGAATCTCTGCTTTTTCATTCCCAATCTGGGCACCACTGCCGTTGGAATTACGCTTCTTACGTACGGTGGTAAACTGCAGCTGGGCATACTANNCCGATCGTGCGGTCATTCGCACAGAANACGAAAGCCACAGCATTCTCCGTGGAACGATCGNGGAGATTTGAACAGTATGGGCCACGTTAT]

[+] EMBL AL697416             [CAGAATTCCGAGTTAAAAACTCACAGTCGTGCTTCCTGCAGGATCGAGAAAGAGTCTCCTCACTTAAGCTACACAATCGCTTTTCGGTAGCTCTGCAAACGCTACCAATTACTCCCGGTATACAGATGAACGACACCAATAGGCATTATGCACTCACTAAGCGTATTTTGGCGGTTNATAGTTATTCCGATGTATTGCGTTCTTCGTCCGACTATTTGATTAACTATTGGATCATGTCTAAAATGACTTGTCTCTTTCCGGAGACCATACTAAGGAAGATTCTCAAAAGCGCACACAGACGCTGGCGATCTCGAATCTACCGGGACCGCAGAGATGCCCCGTATTCAAGGCAGAGAGCTGAAGAATCTCTGCTTTTTCATTCCCAATCTGGGCACCACTGCCGTTGGAATTACGCTTCTTACGTACGGTGGTAAACTGCAGCTGGGCATACTANNCCGATCGTGCGGTCATTCGCACAGAANACGAAAGCCACAGCATTCTCCGTGGAACGATCGNGGAGATTTGAACAGTATGGGCCACGTTAT]


>consensus_8639#2 CAGAATTCCGAGTTAAAAACTCACAGTCGTGCTTCCTGCAGGATCGAGAAAGAGTCTCCT CACTTAAGCTACACAATCGCTTTTCGGTAGCTCTGCAAACGCTACCAATTACTCCCGGTA TACAGATGAACGACACCAATAGGCATTATGCACTCACTAAGCGTATTTTGGCGGTTNATA GTTATTCCGATGTATTGCGTTCTTCGTCCGACTATTTGATTAACTATTGGATCATGTCTA AAATGACTTGTCTCTTTCCGGAGACCATACTAAGGAAGATTCTCAAAAGCGCACACAGAC GCTGGCGATCTCGAATCTACCGGGACCGCAGAGATGCCCCGTATTCAAGGCAGAGAGCTG AAGAATCTCTGCTTTTTCATTCCCAATCTGGGCACCACTGCCGTTGGAATTACGCTTCTT ACGTACGGTGGTAAACTGCAGCTGGGCATACTANNCCGATCGTGCGGTCATTCGCACAGA ANACGAAAGCCACAGCATTCTCCGTGGAACGATCGNGGAGATTTGAACAGTATGGGCCAC GTTAT



consensusID : consensus_8639#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 539
fasta sequence
                              [AGAATCGGCACGAGGTTGNAACGAGGGTTTGCTTCTAGAAGCTATTGTCGACAAGGAAGTACCATCGCGCTGGAAGCATCTGTCCAAGCTAAAGGTGATGAACATCGACTACATCCTGAAAGAACAGAAAGCCTCCGATCATCACCATTTGACCATAGGCGAAACAATGCTCCAGCGCATATGGAAAAGAATTCCCTCTCTCAACGAGCTAGCAACGCAACGGGACCACATTTTGCGAATCCTTTGGACCATCTACACTGCACCCGCCTTCTTTCATGATGTATCTAGACGTCAGGTCGATAACAACTGCATCCACGCTTCACAAATGGCCAACGAGAAGGTGGTCAGCTGGATACACGAGGATCACAACCGTGATACACGCTGGGTTGAGATTATCAAGCGCACTAAACGGCTTCTGCCTGGAACGCGGTTCTCGGACGTTTTCCTCACTGCACTTTCCGTCCAGTTTGGAAACATTNCTTNTGGCCAGCNAAAATGGTACATCGCCGGAGAAAACCGTCAACAGGTCGGTGACTTCC]

[+] EMBL BX469259             [AGAATCGGCACGAGGTTGNAACGAGGGTTTGCTTCTAGAAGCTATTGTCGACAAGGAAGTACCATCGCGCTGGAAGCATCTGTCCAAGCTAAAGGTGATGAACATCGACTACATCCTGAAAGAACAGAAAGCCTCCGATCATCACCATTTGACCATAGGCGAAACAATGCTCCAGCGCATATGGAAAAGAATTCCCTCTCTCAACGAGCTAGCAACGCAACGGGACCACATTTTGCGAATCCTTTGGACCATCTACACTGCACCCGCCTTCTTTCATGATGTATCTAGACGTCAGGTCGATAACAACTGCATCCACGCTTCACAAATGGCCAACGAGAAGGTGGTCAGCTGGATACACGAGGATCACAACCGTGATACACGCTGGGTTGAGATTATCAAGCGCACTAAACGGCTTCTGCCTGGAACGCGGTTCTCGGACGTTTTCCTCACTGCACTTTCCGTCCAGTTTGGAAACATTNCTTNTGGCCAGCNAAAATGGTACATCGCCGGAGAAAACCGTCAACAGGTCGGTGACTTCC]


>consensus_8639#3 AGAATCGGCACGAGGTTGNAACGAGGGTTTGCTTCTAGAAGCTATTGTCGACAAGGAAGT ACCATCGCGCTGGAAGCATCTGTCCAAGCTAAAGGTGATGAACATCGACTACATCCTGAA AGAACAGAAAGCCTCCGATCATCACCATTTGACCATAGGCGAAACAATGCTCCAGCGCAT ATGGAAAAGAATTCCCTCTCTCAACGAGCTAGCAACGCAACGGGACCACATTTTGCGAAT CCTTTGGACCATCTACACTGCACCCGCCTTCTTTCATGATGTATCTAGACGTCAGGTCGA TAACAACTGCATCCACGCTTCACAAATGGCCAACGAGAAGGTGGTCAGCTGGATACACGA GGATCACAACCGTGATACACGCTGGGTTGAGATTATCAAGCGCACTAAACGGCTTCTGCC TGGAACGCGGTTCTCGGACGTTTTCCTCACTGCACTTTCCGTCCAGTTTGGAAACATTNC TTNTGGCCAGCNAAAATGGTACATCGCCGGAGAAAACCGTCAACAGGTCGGTGACTTCC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8639#0      -------------------------------CGTGTCCATCATTCACTAGGAGACTGATT 29
consensus_8639#3      ---------------------------------------AGAATCGGCACGAGGTTGNAA 21
consensus_8639#1      -----------------------------TGCCNCAGGCAGAATCGCCCGAG-GTTCACT 30
consensus_8639#2      CAGAATTCCGAGTTAAAAACTCACAGTCGTGCTTCCTGCAGGATCGAGAAAGAGTCTCCT 60
                                                                 **               

consensus_8639#0      GGCCC---TGATGCGTCTGCTTCTAGAAGCTATTGTCGACA--AGGAAGTACCATCGCGC 84
consensus_8639#3      CGA---------GGGTTTGCTTCTAGAAGCTATTGTCGACA--AGGAAGTACCATCGCGC 70
consensus_8639#1      TAC---AGCTACACAATCGCTTTTCGGTAGCTCTGCAAACGCTACCAATTACTTCCGGTA 87
consensus_8639#2      CACTTAAGCTACACAATCGCTTTTCGGTAGCTCTGCAAACGCTACCAATTACTCCCGGTA 120
                                        **** * *       **   **   *  ** ***   **   

consensus_8639#0      TGGAAGCATCTGTCCAAGCTAAAGGTGATGAAC--ATCGACTACATCCTGAAAGAACAGA 142
consensus_8639#3      TGGAAGCATCTGTCCAAGCTAAAGGTGATGAAC--ATCGACTACATCCTGAAAGAACAGA 128
consensus_8639#1      TACAGATGAACGACACCAATAGGCATTATGCACTCACTAAGCGTATTTTGGCAGTTAATA 147
consensus_8639#2      TACAGATGAACGACACCAATAGGCATTATGCACTCACTAAGCGTATTTTGGCGGTTNATA 180
                      *  *       * *     **    * *** **  *   *    **  **   *   * *

consensus_8639#0      AAGCCTCCGATCATCACCATTTGACCATAGGCGAAACAATGCTCCAGCG---CATATGGA 199
consensus_8639#3      AAGCCTCCGATCATCACCATTTGACCATAGGCGAAACAATGCTCCAGCG---CATATGGA 185
consensus_8639#1      GTTATTCCGATGTATTGCGTTCTTCGTCCGACTATTTGATTAACTATTGGATCATGTCTA 207
consensus_8639#2      GTTATTCCGATGTATTGCGTTCTTCGTCCGACTATTTGATTAACTATTGGATCATGTCTA 240
                           ******      * **   *    * * *    **   * *  *   *** *  *

consensus_8639#0      AAA-GAATTCCCTCTCTCAACGAGC--TAGCAACGCAACGGGACCACATTTTGCGAATCC 256
consensus_8639#3      AAA-GAATTCCCTCTCTCAACGAGC--TAGCAACGCAACGGGACCACATTTTGCGAATCC 242
consensus_8639#1      AAATGACTTGTCTCTTTCCGGAGACCATACTAAGGAAGATTCTCAAAAGCGCACACAGCA 267
consensus_8639#2      AAATGACTTGTCTCTTTCCGGAGACCATACTAAGGAAGATTCTCAAAAGCGCACACAG-A 299
                      *** ** **  **** **      *  **  ** * *      * * *     *  *   

consensus_8639#0      TTTGGACCATCTACACTGCACCCGCCTTCTTTCATGATGTATCTAGACGTCAGGTCGATA 316
consensus_8639#3      TTTGGACCATCTACACTGCACCCGCCTTCTTTCATGATGTATCTAGACGTCAGGTCGATA 302
consensus_8639#1      CGCTGGCGATCTCGAATCTACCGGGACCGCAGCA-GATGC-CCCGTATTCAAGGCAGAGA 325
consensus_8639#2      CGCTGGCGATCTCGAATCTACCGGGACCGCAG-A-GATGC-CCCGTATTCAAGGCAGAGA 356
                          * * ****  * *  *** *         * ****   *   *    ***  ** *

consensus_8639#0      ACAACTGCATCCACGCTTCACAAATGGCCAACGAGAAGGTGGT-CAGCTGGATAC-ACGA 374
consensus_8639#3      ACAACTGCATCCACGCTTCACAAATGGCCAACGAGAAGGTGGT-CAGCTGGATAC-ACGA 360
consensus_8639#1      GCTGAAGAATCTCTGCTTTTTCATTCCCAATCTGGGCACCACTGCCGTTGGNAATTACGC 385
consensus_8639#2      GCTGAAGAATCTCTGCTTTTTCATTCCCAATCTGGGCACCACTGCCGTTGGAA-TTACGC 415
                       *    * ***   ****    * *  * * *  *       * * * ***     *** 

consensus_8639#0      GGATCACA-ACCGTGATACACGCTGGGTTGAGATTATCAAGCGCACTAAACGGCT-TCTG 432
consensus_8639#3      GGATCACA-ACCGTGATACACGCTGGGTTGAGATTATCAAGCGCACTAAACGGCT-TCTG 418
consensus_8639#1      TTCTTACGTACGGTGGTAAGC-TGCAGCTGGGTATACTAGCC-GATCGTGCGGTCATTCG 443
consensus_8639#2      TTCTTACGTACGGTGGTAAAC-TGCAGCTGGGCATACTANNCCGATCGTGCGGTCATTCG 474
                         * **  ** *** **  *     * ** *  **  *  *  *     ***   *  *

consensus_8639#0      CCTGGAACGCGGTTCTCGGACGTTTTCCTCACTGCACTTTCC-TCCAGTTTGGAAACATT 491
consensus_8639#3      CCTGGAACGCGGTTCTCGGACGTTTTCCTCACTGCACTTTCCGTCCAGTTTGGAAACATT 478
consensus_8639#1      CACAGAAGACGAAGCCCACA-GCATTCTCCGTGGAACGATCGAGGNAATTTG--AAC-GT 499
consensus_8639#2      CACAGAANACGAAAGCCACA-GCATTCTCCGTGGAACGATCGNGGAGATTTG--AACAGT 531
                      *   ***  **     *  * *  ***  *   * **  **       ****  ***  *

consensus_8639#0      CTTTG---CCAGCAAAAATGGTACATCGCCAAAAAACCTCACAGTCGTGCTTCCTGCAAG 548
consensus_8639#3      NCTTNTGGCCAGCNAAAATGGTACATCGCCGGAGAAAACCGTCAACAGGT---CGGTGAC 535
consensus_8639#1      ATGGG---CCAGTATTACATGAAAGCTCTCTGATATACACTACCACTTGCTGAATCTAAA 556
consensus_8639#2      ATGGG---CCA-CGTTAT------------------------------------------ 545
                              ***     *                                           

consensus_8639#0      GATCGAGAAAGAGTCTCCTCACTTAAAGCTACACAATCGCTTTTCGGTAGCTCTGCAAAC 608
consensus_8639#3      TTCC-------------------------------------------------------- 539
consensus_8639#1      TCCCGCACCCTATATNCTCTCCGCTACAACAANTATACCCACATAAATNTTAATNAAAAC 616
consensus_8639#2      ------------------------------------------------------------
                                                                                  

consensus_8639#0      GCTACCAATTACTCCCGGTATACAGATGAACGACACCAATAGGCATTATGCACTCACTAA 668
consensus_8639#3      ------------------------------------------------------------
consensus_8639#1      ACNACCACACNNCACAANCACAACACAGGCATGCTCGCCGCCCGCACCCTTATTCCCC-- 674
consensus_8639#2      ------------------------------------------------------------
                                                                                  

consensus_8639#0      GCGTATTTTGGCGGTTAATAGTTATTCCGATGTATTGCGTTCTTCGTCCGACTATTTGAT 728
consensus_8639#3      ------------------------------------------------------------
consensus_8639#1      ------------------------------------------------------------
consensus_8639#2      ------------------------------------------------------------
                                                                                  

consensus_8639#0      TAACTATTGGATCATGTCTAAAATGACTTGTCTCTTTCCGGAGACCATACTAAGGAAGAT 788
consensus_8639#3      ------------------------------------------------------------
consensus_8639#1      ------------------------------------------------------------
consensus_8639#2      ------------------------------------------------------------
                                                                                  

consensus_8639#0      TCTCAAAAGCGCACACAGCACGCTGGCGATCTCGAATCTACCGGGACCGCAGCAGATGCC 848
consensus_8639#3      ------------------------------------------------------------
consensus_8639#1      ------------------------------------------------------------
consensus_8639#2      ------------------------------------------------------------
                                                                                  

consensus_8639#0      CCGTATTCAAGGCAGAGAGCTGAAGAATCTCTGCTTTTTCATTCCCAATCTGGGCACCAC 908
consensus_8639#3      ------------------------------------------------------------
consensus_8639#1      ------------------------------------------------------------
consensus_8639#2      ------------------------------------------------------------
                                                                                  

consensus_8639#0      TGCCGTTGGAATTACGCTTCTTACGTACGGNGGNAAACTGCAGCTGGGCATACTAGCCGA 968
consensus_8639#3      ------------------------------------------------------------
consensus_8639#1      ------------------------------------------------------------
consensus_8639#2      ------------------------------------------------------------
                                                                                  

consensus_8639#0      TCGTGCGGTCATTCGCACAGAAGACGAAGNCCACAGCATTCTCCGTGGAACGATCGAGGA 1028
consensus_8639#3      ------------------------------------------------------------
consensus_8639#1      ------------------------------------------------------------
consensus_8639#2      ------------------------------------------------------------
                                                                                  

consensus_8639#0      GATTGAACGTATGGGGCCAGTTATTAGAAGAAGTTTGATTAACTAA 1074
consensus_8639#3      ----------------------------------------------
consensus_8639#1      ----------------------------------------------
consensus_8639#2      ----------------------------------------------
                                                                    




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)