cluster # 8643

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Anopheles gambiae
cluster # 8643 cluster # 8643 Sequences # 11 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8643#0 length = 1828 sequences # 9

consensus_8643#1 length = 666 sequences # 1
consensus_8643#2 length = 339 sequences # 1

consensusID : consensus_8643#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 1828
fasta sequence

                              [CCGACGAAACGCATTGTAAGTGATCGTGTCACGAGTTCAAGTTTTTCACGAAGAAAAAGAAGAATAACGGAAAATTGGGCACAATTTCTAGTTCGCTGGCTGCTGTACACGGCTCAGCAGCTGAGATCGCTGGTTAATTGTGACCTAGTTGTTTTCGTTGGTATTGTTAAAGTGAATAAAACACAAGTGCGCAATATTGTTGGAAAGGTACACAACACCATTCAATCAGGAGGAGAATCCTGCATTCCTTACATCGCCGTTACAGCCCATTTGCCGAAGTGTTGTGTGGTAGCTTCAAAGCTGTGATTATTGAAAAGATTTGCGTTCTTCCGAAGCAGGAGAAGTGTGCATAAGGAAAAAAATAGTGTCTTGTGATTCTGTTGAACTAACCAAACGCCGTGTAAAGAAAGAGTTTATTTTTGTATGAAGTCTATCCCTGGTAGTGGTTGCGACTGGATTTGACATGGCCGGTAATGGCGAAACATCGTGGTGCTTTTCACAGATAAAGGGTGCCCTGGATGATGATGTTACCGAGGCCGACATCATTTCCTGCGTCGAGTTTAATCACGATGGTGAACTTTTGGCCACTGGTGATAAAGGAGGCAGGGTTGTTATATTCCAGAGAGACCCATCGTCGAAGGCTTCAACACCACGGCGTGGTGAATACAACGTGTATTCAACATTTCAATCGCATGAACCTGAATTCGATTACTTAAAGTCGCTCGAGATTGAGG-AAAAAATTAACAAAATCAGATGGCTGAGGCGCAAGAATCAGTCACACTTTCTGCTCTCGACCAACGACAAAACGATCAAGCTGTGGAAGGTGTCGGAGCGCGATAAGCGAGTGGAGGGATACAACACACGGGAGGACAATGGCAGCATTCGCGATCCGGCCTCGATCAATTCGCTGAGAGTGCCATCGATCAAGCCGATGGATCTGATGGTGGAGGCATCGCCACGTCGCATTTTTGCGAACGCCCATACCTACCACATTAACTCGATCTCGGTGAACTCGGATCAGGAGACGTACCTGTCGGCGGATGATCTACGGATCAACTTGTGGCATCTAGAGATTACCGACCAGAGCTTCAATATTGTCGACATCAAACCGGCGAATATGGAGGAGCTGACTGAGGTGATCACGGCGGCCGAATTCCACCCGACCGAGTGCAACGTGTTCGTCTACTCGAGCAGCAAGGGTACAATTAGGTTATGTGATATGCGCTCTTCGGCATTGTGCGATCGGCATGCAAAGCTGTTCGAGGAACCGGAAGATGTGGACACAACGAACAAGAGTTTTTTCCGCGAAATCATAAGTTCGATTAGCGATGTGAAGCTGAGCAACTCTGGACGCTACATGATCTCGAGGGACTATCTGAGTATTAAGGTGTGGGACCTGCACATTGAAACTAAACCTATTGAAACGTATCCGGTACATGAATACCTCCGCACGAAGCTGTGTTCGCTATACGAGAACGACTGTATCTTCGACAAGTTCGAATGTTGCTGGAACGGTAACGATTCCGCCATTATGACTGGCAGTTACAACAATTTCTTCCGCATTTTTGATCGGAACACGAACAAGGACGTGACGCTCGAGGCGTCTCGCGACATCATCAAACCGAAGACAGTGTTGAAACCGCGCAAAGTGTGTACCGGTGGCAAGCGGAAAAAGGACGAAATCAGCGTTGACTGTTTGGCCTTCAACAAGCGAATTCTGCACACTGCTTGGCATCCGCTCGAAAACATCATCGCCGTGGCCGCCACCAATAATTTATTCATTTTTCAGGATAAGTTTTAGCCAATAGTAATAGTACTAGTGAGGATA]

[+] EMBL BM606540             [CCGACGAAACGCATTGTAAGTGATCGTGTCACGAGTTCAAGTTTTTCACGAAGAAAAAGAAGAATAACGGAAAATTGGGCACAATTTCTAGTTCGCTGGCTGCTGTACACGGCTCAGCAGCTGAGATCGCTGGTTAATTGTGACCTAGTTGTTTTCGTTGGTATTGTTAAAGTGAATAAAACACAAGTGCGCAATATTGTTGGAAAGGTACACAACACCATTCAATCAGGAGGAGAATCCTGCATTCCTTACATCGCCGTTACAGCCCATTTGCCGAAGTGTTGTGTGGTAGCTTCAAAGCTGTGATTATTGAAAAGATTTGCGTTCTTCCGAAGCAGGAGAAGTGTGCATAAGGAAAAAAATAGTGTCTTGTGATTCTGTTGAACTAACCAAACGCCGTGTAAAGAAAGAGTTTATTTTTGTATGAAGTCTATCCCTGGTAGTGGTTGCGACTGGATTTGACATGGCCGGTAATGGCGAAACATCGTGGTGCTTTTCACAGATAAAGGGTGCCCTGGATGATGATGTTACCGAGGCCGACATCATTTCCTGCGTCGAGTTTAATCACGATGGTGAACTTTTGGCCACTGGTGATAAAGGAGGCAGGGTTGTTATATTCCAGAGAGACCCATCGTCGAAGGCTTCAACACCACGGCGTGGTGAATACAACGTGTATTCAACATTTCAATCGCATGAACC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL BX625250             [                                                                                                                                                                                                                                                TGCATTCCTTACATCGCCGTTACAGCCCATTTGCCGAAGTGTTGTGTGGTAGCTTCAAAGCTGTGATTATTGAAAAGATTTGCGTTCTTCCGAAGCAGGAGAAGTGTGCATAAGGAAAAAAATAGTGTCTTGTGATTCTGTTGAACTAACCAAACGCCGTGTAAAGAAAGAGTTTATTTTTGTATGAAGTCTATCCCTGGTAGTGGTTGCGACTGGATTTGACATGGCCGGTAATGGCGAAACATCGTGGTGCTTTTCACAGATAAAGGGTGCCCTGGATGATGATGTTACCGAGGCCGACATCATTTCCTGCGTCGAGTTTAATCACGATGGTGAACTTTTGGCCACTGGTGATAAAGGAGGCAGGGTTGTTATATTCCAGAGAGACCCATCGTCGAAGGCTTCAACACCGCGGCGTGGTGAATACAACGTGTATTCAACATTTCAATCGCATGAACCTGAATTCGATTACTTAAAGTCGCTCGAGATTGAGG AAAAAATTAACAAAATCAGATGGCTGAGGCGCAAGAATCAGTCACACTTTCTGCTCTCGACCAACGACAAAACGATCAAGCTGTGGAAGGTGTCGGAGCGCGATAAGCGAGTGGAGGGATACAACACACGGGAGGACAATGGCAGCATTCGCGATCCGGCCTCGATCAATTCGCTGAGAGTGCCATCGATCAAGCCGATGGATCTGATGGTGGANGCATCNCCACGTCGCATTTTTGCGAACGCCCATACCTACCACATTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL BX602220             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 CTTCAACACCACGGCGTGGTGAATACAACGTGTATTCAACATTTCAATCGCATGAACCTGAATTCGATTACTTAAAGTCGCTCGAGATTGAGGAAAAAAATTAACAAAATCAGATGGCTGAGGCGCAAGAATCAGTCACACTTTCTGCTCTCGACCAACGACAAAACGATCAAGCTGTGGAAGGTGTCGGAGCGCGATAAGCGAGTGGAGGGATACAACACACGGGAGGACAATGGCAGCATTCGCGATCCGGCCTCGATCAATTCGCTGAGAGTGCCATCGATCAAGCCGATGGATCTGATGGTGGAGGCATCGCCACGTCGCATTTTTGCGAACGCCCATACCTACCACATTAACTCGATCTCGGTGAACTCGGATCAGGAGACGTACCTGTCGGCGGATGATCTACGGATCAACTTGTGGCATCTAGAGATTACCGACCAGAGCTTCAATATTGTCGACATCAAACCGGCGAATATGGAGGAGCTGACTGAGGTGATCACGGCGGCCGAATTCCACCCGACCGAGTGCAACGTGTTCGTCTACTCGAGCAGCAAGGGTACAATTAGGTTATGTGATATGCGCTCTTCGGCATTGTGCGATCGGCATGCAAAGCTGTTCGAGGAACCGGAAGATGTGGACAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL BM597914             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ATTAACAAAATCAGATGGCTGAGGCGCAAGAATCAGTCACACTTTCTGCTCTCGACCAACGACAAAACGATCAAGCTGTGGAAGGTGTCGGAGCGCGATAAGCGAGTGGAGGGATACAACACACGGGAGGACAATGGCAGCATTCGCGATCCGGCCTCGATCAATTCGCTGAGAGTGCCATCGATCAAGCCGATGGATCTGATGGTGGAGGCATCGCCACGTCGCATTTTTGCGAACGCCCATACCTACCACATTAACTCGATCTCGGTGAACTCGGATCAGGAGACGTACCTGTCGGCGGATGATCTACGGATCAACTTGTGGCATCTAGAGATTACCGACCAGAGCTTCAATATCGTCGACATCAAACCGGCGAATATGGAGGAGCTGACTGAGGTGATCACGGCGGCCGAATTCCACCCGACCGAGTGCAACGTGTTCGTCTACTCGAGCAGCAAGGGTACAATTAGGTTATGTGATATGCGCTCTTCGGCATTGTGCGATCGGCATGCAAAGCTGTTCGAGGAACCGGAAGATGTGGACACAACGAACAAGAGTTTTTTCCGCGAAATCATAAGTTCGATTAGCGATGTGAAGCTGAGCAACTCTGGACGCTACATGATCTCGAGGGACTATCTGAGTATTAAGGTGTGGG                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL BX625146             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ATCTACGGATCAACTTGTGGCATCTAGAGATTACCGACCAGAGCTTCAATATTGTCGACATCAAACCGGCGAATATGGAGGAGCTGACTGAGGTGATCACGGCGGCCGAATTCCACCCGACCGAGTGCAACGTGTTCGTCTACTCGAGCAGCAAGGGTACAATTAGGTTATGTGATATGCGCTCTTCGGCATTGTGCGATCGGCATGCAAAGCTGTTCGAGGAACCGGAAGATGTGGACACAACGAACAAGAGTTTTTTCCGCGAAATCATAAGTTCGATTAGCGATGTGAAGCTGAGCAACTCTGGACGCTACATGATCTCGAGGGACTATCTGAGTATTAAGGTGTGGGACCTGCACATGGAAACTAAACCTATTGAAACGTATCCGGTACATGAATACCTCCGCACGAAGCTGTGTTCGCTATACGAGAACGACTGTATCTTCGACAAGTTCGAATGTTGCTGGAACGGTAACGATTCCGCCATTATGACTGGCAGTTACAACAATTTCTTCCGCATTTTTGATCGGAACACGAACAAGGACGTGACGCTCGAGGCGTCTCGCGACATCATCAAACCGAAGACAGTGTTGAAACCGCGCAAAGTGTGTACCGGTGGCAAGCGGAAAAAGGACGAAATCAGCGTTGACTGTTTGGCCTTCAACAAGCGAATTCTGCACACTGCTTGGCATCCGCTCGAAAACATCATCGCCGTGGCCGCCACCAATAATTTATTCATTTTTCAGGATAAGTTTTAGCCAATAGTAATAGTACTAGTGAGGATA]
[+] EMBL BX614137             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         GGTTATGTGATATGCGCTCTTCGGCATTGTGCGATCGGCATGCAAAGCTGTTCGAGGAACCGGAAGATGTGGACACAACGAACAAGAGTTTTTTCCGCGAAATCATAAGTTCGATTAGCGATGTGAAGCTGAGCAACTCTGGACGCTACATGATCTCGAGGGACTATCTGAGTATTAAGGTGTGGGACCTGCACATGGAAACTAAACCTATTGAAACGTATCCGGTACATGAATACCTCCGCACGAAGCTGTGTTCGCTATACGAGAACGACTGTATCTTCGACAAGTTCGAATGTTGCTGGAACGGTAACGATTCCGCCATTATGACTGGCAGTTACAACAATTTCTTCCGCATTTTTGATCGGAACACGAACAAGGACGTGACGCTCGAGGCGTCTCGCGACATCATCAAACCGAAGACAGTGTTGAAACCGCGCAAAGTGTGTACCGG                                                                                                                                                                         ]
[+] EMBL BX614019             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CTCTTCGGCATTGTGCGATCGGCATGCAAAGCTGTTCGAGGAACCGGAAGATGTGGACACAACGAACAAGAGTTTTTTCCGCGAAATCATAAGTTCGATTAGCGATGTGAAGCTGAGCAACTCTGGACGCTACATGATCTCGAGGGACTATCTGAGTATTAAGGTGTGGGACCTGCACATTGAAACTAAACCTATTGAAACGTATCCGGTACATGAATACCTCCGCACGAAGCTGTGTTCGCTATACGAGAACGACTGTATCTTCGACAAGTTCGAATGTTGCTGGAACGGTAACGATTCCGCCATTATGACTGGCAGTTA                                                                                                                                                                                                                                                                                           ]
[+] EMBL BX614020             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                CATAAGTTCGATTAGCGATGTGAAGCTGAGCAACTCTGGACGCTACATGATCTCGAGGGACTATCTGAGTATTAAGGTGTGGGACCTGCACATTGAAACTAAACCTATTGAAACGTATCCGGTACATGAATACCTCCGCACGAAGCTGTGTTCGCTATACGAGAACGACTGTATCTTCGACAAGTTCGAATGTTGCTGGAACGGTAACGATTCCGCCATTATGACTGGCAGTTACAACAATTTCCTCC                                                                                                                                                                                                                                                                             ]
[+] EMBL BX614018             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                CATAAGTTCGATTAGCGATGTGAAGCTGAGCAACTCTGGACGCTACATGATCTCGAGGGACTATCTGAGTATTAAGGTGTGGGACCTGCACATTGAAACTAAACCTATTGAAACGTATCCGGTACATGAATACCTCCGCACGAAGCTGTGTTCGCTATACGAGAACGACTGTATCTTCGACAAGTTCGAATGTTGCTGGAAC                                                                                                                                                                                                                                                                                                                           ]




>consensus_8643#0
CCGACGAAACGCATTGTAAGTGATCGTGTCACGAGTTCAAGTTTTTCACGAAGAAAAAGA
AGAATAACGGAAAATTGGGCACAATTTCTAGTTCGCTGGCTGCTGTACACGGCTCAGCAG
CTGAGATCGCTGGTTAATTGTGACCTAGTTGTTTTCGTTGGTATTGTTAAAGTGAATAAA
ACACAAGTGCGCAATATTGTTGGAAAGGTACACAACACCATTCAATCAGGAGGAGAATCC
TGCATTCCTTACATCGCCGTTACAGCCCATTTGCCGAAGTGTTGTGTGGTAGCTTCAAAG
CTGTGATTATTGAAAAGATTTGCGTTCTTCCGAAGCAGGAGAAGTGTGCATAAGGAAAAA
AATAGTGTCTTGTGATTCTGTTGAACTAACCAAACGCCGTGTAAAGAAAGAGTTTATTTT
TGTATGAAGTCTATCCCTGGTAGTGGTTGCGACTGGATTTGACATGGCCGGTAATGGCGA
AACATCGTGGTGCTTTTCACAGATAAAGGGTGCCCTGGATGATGATGTTACCGAGGCCGA
CATCATTTCCTGCGTCGAGTTTAATCACGATGGTGAACTTTTGGCCACTGGTGATAAAGG
AGGCAGGGTTGTTATATTCCAGAGAGACCCATCGTCGAAGGCTTCAACACCACGGCGTGG
TGAATACAACGTGTATTCAACATTTCAATCGCATGAACCTGAATTCGATTACTTAAAGTC
GCTCGAGATTGAGGAAAAAATTAACAAAATCAGATGGCTGAGGCGCAAGAATCAGTCACA
CTTTCTGCTCTCGACCAACGACAAAACGATCAAGCTGTGGAAGGTGTCGGAGCGCGATAA
GCGAGTGGAGGGATACAACACACGGGAGGACAATGGCAGCATTCGCGATCCGGCCTCGAT
CAATTCGCTGAGAGTGCCATCGATCAAGCCGATGGATCTGATGGTGGAGGCATCGCCACG
TCGCATTTTTGCGAACGCCCATACCTACCACATTAACTCGATCTCGGTGAACTCGGATCA
GGAGACGTACCTGTCGGCGGATGATCTACGGATCAACTTGTGGCATCTAGAGATTACCGA
CCAGAGCTTCAATATTGTCGACATCAAACCGGCGAATATGGAGGAGCTGACTGAGGTGAT
CACGGCGGCCGAATTCCACCCGACCGAGTGCAACGTGTTCGTCTACTCGAGCAGCAAGGG
TACAATTAGGTTATGTGATATGCGCTCTTCGGCATTGTGCGATCGGCATGCAAAGCTGTT
CGAGGAACCGGAAGATGTGGACACAACGAACAAGAGTTTTTTCCGCGAAATCATAAGTTC
GATTAGCGATGTGAAGCTGAGCAACTCTGGACGCTACATGATCTCGAGGGACTATCTGAG
TATTAAGGTGTGGGACCTGCACATTGAAACTAAACCTATTGAAACGTATCCGGTACATGA
ATACCTCCGCACGAAGCTGTGTTCGCTATACGAGAACGACTGTATCTTCGACAAGTTCGA
ATGTTGCTGGAACGGTAACGATTCCGCCATTATGACTGGCAGTTACAACAATTTCTTCCG
CATTTTTGATCGGAACACGAACAAGGACGTGACGCTCGAGGCGTCTCGCGACATCATCAA
ACCGAAGACAGTGTTGAAACCGCGCAAAGTGTGTACCGGTGGCAAGCGGAAAAAGGACGA
AATCAGCGTTGACTGTTTGGCCTTCAACAAGCGAATTCTGCACACTGCTTGGCATCCGCT
CGAAAACATCATCGCCGTGGCCGCCACCAATAATTTATTCATTTTTCAGGATAAGTTTTA
GCCAATAGTAATAGTACTAGTGAGGATA

consensusID : consensus_8643#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 666
fasta sequence

                              [CCGCGGACGCGTGGGGAAGGCTTCAACACCGCGGCGTGGTGAATACAACGTGTATTCAACATTTCAATCGCATGAACCTGAATTCGATTACTTAAAGTCGCTCGAGATTGAGGAAAAAATTAACAAAATCAGATGGCTGAGGCGCAAGAATCAGTCACACTTTCTGCTCTCGACCAACGACAAAACGATCAAGCTGTGGAAGGTGTCGGAGCGCGATAAGCGAGTGGAGGGATACAACACACGGGAGGACAATGGCAGCATTCGCGATCCGGCCTCGATCAATTCGCTGAGAGTGCCATCGATCAAGCCGATGGATCTGATGGTGGAGGCATCGCCACGTCGCATTTTTGCGAACGCCCATACCTACCACATTAACTCGATCTCGGTGAACTCGGATCAGGAGACGTACCTGTCGGCGGATGATCTACGGATCAACTTGTGGCATCTAGAGATTACCGACCAGAGCTTCAATATCGTCGACATCAAACCGGCGAATATGGAGGAGCTGACTGAGGTGATCACGGCGGCCGAATTCCACCCGACCGAGTGCAACGTGTTCGTCTACTCGAGCAGCAAGGGTACAATTAGGTTATGTGATATGCGCTCTTCGGCATTGTGCGATCGGCATGCAAAGCTGTTCGAGGAACCGGAAGATGTGGACACAAC]

[+] EMBL BM580660             [CCGCGGACGCGTGGGGAAGGCTTCAACACCGCGGCGTGGTGAATACAACGTGTATTCAACATTTCAATCGCATGAACCTGAATTCGATTACTTAAAGTCGCTCGAGATTGAGGAAAAAATTAACAAAATCAGATGGCTGAGGCGCAAGAATCAGTCACACTTTCTGCTCTCGACCAACGACAAAACGATCAAGCTGTGGAAGGTGTCGGAGCGCGATAAGCGAGTGGAGGGATACAACACACGGGAGGACAATGGCAGCATTCGCGATCCGGCCTCGATCAATTCGCTGAGAGTGCCATCGATCAAGCCGATGGATCTGATGGTGGAGGCATCGCCACGTCGCATTTTTGCGAACGCCCATACCTACCACATTAACTCGATCTCGGTGAACTCGGATCAGGAGACGTACCTGTCGGCGGATGATCTACGGATCAACTTGTGGCATCTAGAGATTACCGACCAGAGCTTCAATATCGTCGACATCAAACCGGCGAATATGGAGGAGCTGACTGAGGTGATCACGGCGGCCGAATTCCACCCGACCGAGTGCAACGTGTTCGTCTACTCGAGCAGCAAGGGTACAATTAGGTTATGTGATATGCGCTCTTCGGCATTGTGCGATCGGCATGCAAAGCTGTTCGAGGAACCGGAAGATGTGGACACAAC]




>consensus_8643#1
CCGCGGACGCGTGGGGAAGGCTTCAACACCGCGGCGTGGTGAATACAACGTGTATTCAAC
ATTTCAATCGCATGAACCTGAATTCGATTACTTAAAGTCGCTCGAGATTGAGGAAAAAAT
TAACAAAATCAGATGGCTGAGGCGCAAGAATCAGTCACACTTTCTGCTCTCGACCAACGA
CAAAACGATCAAGCTGTGGAAGGTGTCGGAGCGCGATAAGCGAGTGGAGGGATACAACAC
ACGGGAGGACAATGGCAGCATTCGCGATCCGGCCTCGATCAATTCGCTGAGAGTGCCATC
GATCAAGCCGATGGATCTGATGGTGGAGGCATCGCCACGTCGCATTTTTGCGAACGCCCA
TACCTACCACATTAACTCGATCTCGGTGAACTCGGATCAGGAGACGTACCTGTCGGCGGA
TGATCTACGGATCAACTTGTGGCATCTAGAGATTACCGACCAGAGCTTCAATATCGTCGA
CATCAAACCGGCGAATATGGAGGAGCTGACTGAGGTGATCACGGCGGCCGAATTCCACCC
GACCGAGTGCAACGTGTTCGTCTACTCGAGCAGCAAGGGTACAATTAGGTTATGTGATAT
GCGCTCTTCGGCATTGTGCGATCGGCATGCAAAGCTGTTCGAGGAACCGGAAGATGTGGA
CACAAC

consensusID : consensus_8643#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 339
fasta sequence

                              [CAGCAGATTGCAGAGGTGTACTGTCGGCGGATGATCTACGGATCACTTGTGGCATCTAGAGATTACCGACCAGAGCTTCAATATTGTCGACATCAAACCCGGCCGAATATGGAGGAGCTGACTGAGGTGGATTCCACCGGGGGCGGGCCCCGGAAATTTCCCAACCCTCCGGAACCGGAAGTTTGGCCAAACGGTTGGTTTCCCGTTCTTAAACTTCCCGCAAGGCCAAGGCACAAGGGGGGTTACCAAAATTTAACGGGGTTTAACTTGGTTGGAATTAATTGGCCGGCCTTCCTTTTCCGGGGCATTTGGTGGCCGGACTCCGGGCATTGCCAAAGG]

[+] EMBL AL696602             [CAGCAGATTGCAGAGGTGTACTGTCGGCGGATGATCTACGGATCACTTGTGGCATCTAGAGATTACCGACCAGAGCTTCAATATTGTCGACATCAAACCCGGCCGAATATGGAGGAGCTGACTGAGGTGGATTCCACCGGGGGCGGGCCCCGGAAATTTCCCAACCCTCCGGAACCGGAAGTTTGGCCAAACGGTTGGTTTCCCGTTCTTAAACTTCCCGCAAGGCCAAGGCACAAGGGGGGTTACCAAAATTTAACGGGGTTTAACTTGGTTGGAATTAATTGGCCGGCCTTCCTTTTCCGGGGCATTTGGTGGCCGGACTCCGGGCATTGCCAAAGG]




>consensus_8643#2
CAGCAGATTGCAGAGGTGTACTGTCGGCGGATGATCTACGGATCACTTGTGGCATCTAGA
GATTACCGACCAGAGCTTCAATATTGTCGACATCAAACCCGGCCGAATATGGAGGAGCTG
ACTGAGGTGGATTCCACCGGGGGCGGGCCCCGGAAATTTCCCAACCCTCCGGAACCGGAA
GTTTGGCCAAACGGTTGGTTTCCCGTTCTTAAACTTCCCGCAAGGCCAAGGCACAAGGGG
GGTTACCAAAATTTAACGGGGTTTAACTTGGTTGGAATTAATTGGCCGGCCTTCCTTTTC
CGGGGCATTTGGTGGCCGGACTCCGGGCATTGCCAAAGG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8643#0      CCGACGAAACGCATTGTAAGTGATCGTGTCACGAGTTCAAGTTTTTCACGAAGAAAAAGA 60
consensus_8643#1      ------------------------------------------------------------
consensus_8643#2      ------------------------------------------------------------
                                                                                  

consensus_8643#0      AGAATAACGGAAAATTGGGCACAATTTCTAGTTCGCTGGCTGCTGTACACGGCTCAGCAG 120
consensus_8643#1      ------------------------------------------------------------
consensus_8643#2      ------------------------------------------------------------
                                                                                  

consensus_8643#0      CTGAGATCGCTGGTTAATTGTGACCTAGTTGTTTTCGTTGGTATTGTTAAAGTGAATAAA 180
consensus_8643#1      ------------------------------------------------------------
consensus_8643#2      ------------------------------------------------------------
                                                                                  

consensus_8643#0      ACACAAGTGCGCAATATTGTTGGAAAGGTACACAACACCATTCAATCAGGAGGAGAATCC 240
consensus_8643#1      ------------------------------------------------------------
consensus_8643#2      ------------------------------------------------------------
                                                                                  

consensus_8643#0      TGCATTCCTTACATCGCCGTTACAGCCCATTTGCCGAAGTGTTGTGTGGTAGCTTCAAAG 300
consensus_8643#1      ------------------------------------------------------------
consensus_8643#2      ------------------------------------------------------------
                                                                                  

consensus_8643#0      CTGTGATTATTGAAAAGATTTGCGTTCTTCCGAAGCAGGAGAAGTGTGCATAAGGAAAAA 360
consensus_8643#1      ------------------------------------------------------------
consensus_8643#2      ------------------------------------------------------------
                                                                                  

consensus_8643#0      AATAGTGTCTTGTGATTCTGTTGAACTAACCAAACGCCGTGTAAAGAAAGAGTTTATTTT 420
consensus_8643#1      ------------------------------------------------------------
consensus_8643#2      ------------------------------------------------------------
                                                                                  

consensus_8643#0      TGTATGAAGTCTATCCCTGGTAGTGGTTGCGACTGGATTTGACATGGCCGGTAATGGCGA 480
consensus_8643#1      ------------------------------------------------------------
consensus_8643#2      ------------------------------------------------------------
                                                                                  

consensus_8643#0      AACATCGTGGTGCTTTTCACAGATAAAGGGTGCCCTGGATGATGATGTTACCGAGGCCGA 540
consensus_8643#1      ------------------------------------------------------------
consensus_8643#2      ------------------------------------------------------------
                                                                                  

consensus_8643#0      CATCATTTCCTGCGTCGAGTTTAATCACGATGGTGAACTTTTGGCCACTGGTGATAAAGG 600
consensus_8643#1      ------------------------------------------------------------
consensus_8643#2      ------------------------------------------------------------
                                                                                  

consensus_8643#0      AGGCAGGGTTGTTATATTCCAGAGAGACCCATCGTCGAAGGCTTCAACACCACGGCGTGG 660
consensus_8643#1      -------------------CCGCG-GACGCGTGGG-GAAGGCTTCAACACCGCGGCGTGG 39
consensus_8643#2      ------------------------------------------------------------
                                                                                  

consensus_8643#0      TGAATACAACGTGTATTCAACATTTCAATCGCATGAACCTGAATTCGATTACTTAAAGTC 720
consensus_8643#1      TGAATACAACGTGTATTCAACATTTCAATCGCATGAACCTGAATTCGATTACTTAAAGTC 99
consensus_8643#2      ------------------------------------------------------------
                                                                                  

consensus_8643#0      GCTCGAGATTGAGGAAAAAATTAACAAAATCAGATGGCTGAGGCGCAAGAATCAGTCACA 780
consensus_8643#1      GCTCGAGATTGAGGAAAAAATTAACAAAATCAGATGGCTGAGGCGCAAGAATCAGTCACA 159
consensus_8643#2      ------------------------------------------------------------
                                                                                  

consensus_8643#0      CTTTCTGCTCTCGACCAACGACAAAACGATCAAGCTGTGGAAGGTGTCGGAGCGCGATAA 840
consensus_8643#1      CTTTCTGCTCTCGACCAACGACAAAACGATCAAGCTGTGGAAGGTGTCGGAGCGCGATAA 219
consensus_8643#2      ------------------------------------------------------------
                                                                                  

consensus_8643#0      GCGAGTGGAGGGATACAACACACGGGAGGACAATGGCAGCATTCGCGATCCGGCCTCGAT 900
consensus_8643#1      GCGAGTGGAGGGATACAACACACGGGAGGACAATGGCAGCATTCGCGATCCGGCCTCGAT 279
consensus_8643#2      ------------------------------------------------------------
                                                                                  

consensus_8643#0      CAATTCGCTGAGAGTGCCATCGATCAAGCCGATGGATCTGATGGTGGAGGCATCGCCACG 960
consensus_8643#1      CAATTCGCTGAGAGTGCCATCGATCAAGCCGATGGATCTGATGGTGGAGGCATCGCCACG 339
consensus_8643#2      ------------------------------------------------------------
                                                                                  

consensus_8643#0      TCGCATTTTTGCGAACGCCCATACCTACCACATTAACTCGATCTCGGTGAACTCGGATCA 1020
consensus_8643#1      TCGCATTTTTGCGAACGCCCATACCTACCACATTAACTCGATCTCGGTGAACTCGGATCA 399
consensus_8643#2      -------------------------------------------------CAGCAGATTGC 11
                                                                        *   *  *  

consensus_8643#0      GGAGACGTACCTGTCGGCGGATGATCTACGGATCAACTTGTGGCATCTAGAGATTACCGA 1080
consensus_8643#1      GGAGACGTACCTGTCGGCGGATGATCTACGGATCAACTTGTGGCATCTAGAGATTACCGA 459
consensus_8643#2      AGAGGTGTAC-TGTCGGCGGATGATCTACGGATCA-CTTGTGGCATCTAGAGATTACCGA 69
                       ***  **** ************************ ************************

consensus_8643#0      CCAGAGCTTCAATATTGTCGACATCAAACCGG--CGAATATGGAGGAGCTGACTGAGGTG 1138
consensus_8643#1      CCAGAGCTTCAATATCGTCGACATCAAACCGG--CGAATATGGAGGAGCTGACTGAGGTG 517
consensus_8643#2      CCAGAGCTTCAATATTGTCGACATCAAACCCGGCCGAATATGGAGGAGCTGACTGAGGTG 129
                      *************** ************** *  **************************

consensus_8643#0      A---TCACGGCGGCCGAATTCC--ACCCGACCGAGTGCAACGTGTTCGTCTACTCGAGCA 1193
consensus_8643#1      A---TCACGGCGGCCGAATTCC--ACCCGACCGAGTGCAACGTGTTCGTCTACTCGAGCA 572
consensus_8643#2      GATTCCACCGGGGGCGGGCCCCGGAAATTTCCCAACCCTCCGGAACCGGAAGTTTGGCCA 189
                           *** * ** **    **  *     ** *   *  **    **     * *  **

consensus_8643#0      GCAAGGGTACAATTAGGTTATGTGATATGCGCTCTTCGGCATTGTGCGATCGGCATG--C 1251
consensus_8643#1      GCAAGGGTACAATTAGGTTATGTGATATGCGCTCTTCGGCATTGTGCGATCGGCATG--C 630
consensus_8643#2      --AACGGTTGGTTTCCCGTTCTTAAACTTCCCGCAAGGCCAAGGCACAAGGGGGGTTACC 247
                        ** ***    **    *   * *  * * * *   * **  *  * *  **  *   *

consensus_8643#0      AAAGCTGTTCGAGGAACCGGAAGATGTGGACACAACGAACAAGAGTTTTTTCCGCGAAAT 1311
consensus_8643#1      AAAGCTGTTCGAGGAACCGGAAGATGTGGACACAAC------------------------ 666
consensus_8643#2      AAAATTTAACGGGGTTTAACTTGGT-TGGAATTAATTGGCCGGCCTTCCTTTTCCGGGG- 305
                      ***  *   ** **        * * ****   **                         

consensus_8643#0      CATAAGTTCGATTAGCGATGTGAAGCTGAGCAACTCTGGACGCTACATGATCTCGAGGGA 1371
consensus_8643#1      ------------------------------------------------------------
consensus_8643#2      --------CATTTGGTGGCCGGACTCCGGGCATTGCCAAAGG------------------ 339
                                                                                  

consensus_8643#0      CTATCTGAGTATTAAGGTGTGGGACCTGCACATTGAAACTAAACCTATTGAAACGTATCC 1431
consensus_8643#1      ------------------------------------------------------------
consensus_8643#2      ------------------------------------------------------------
                                                                                  

consensus_8643#0      GGTACATGAATACCTCCGCACGAAGCTGTGTTCGCTATACGAGAACGACTGTATCTTCGA 1491
consensus_8643#1      ------------------------------------------------------------
consensus_8643#2      ------------------------------------------------------------
                                                                                  

consensus_8643#0      CAAGTTCGAATGTTGCTGGAACGGTAACGATTCCGCCATTATGACTGGCAGTTACAACAA 1551
consensus_8643#1      ------------------------------------------------------------
consensus_8643#2      ------------------------------------------------------------
                                                                                  

consensus_8643#0      TTTCTTCCGCATTTTTGATCGGAACACGAACAAGGACGTGACGCTCGAGGCGTCTCGCGA 1611
consensus_8643#1      ------------------------------------------------------------
consensus_8643#2      ------------------------------------------------------------
                                                                                  

consensus_8643#0      CATCATCAAACCGAAGACAGTGTTGAAACCGCGCAAAGTGTGTACCGGTGGCAAGCGGAA 1671
consensus_8643#1      ------------------------------------------------------------
consensus_8643#2      ------------------------------------------------------------
                                                                                  

consensus_8643#0      AAAGGACGAAATCAGCGTTGACTGTTTGGCCTTCAACAAGCGAATTCTGCACACTGCTTG 1731
consensus_8643#1      ------------------------------------------------------------
consensus_8643#2      ------------------------------------------------------------
                                                                                  

consensus_8643#0      GCATCCGCTCGAAAACATCATCGCCGTGGCCGCCACCAATAATTTATTCATTTTTCAGGA 1791
consensus_8643#1      ------------------------------------------------------------
consensus_8643#2      ------------------------------------------------------------
                                                                                  

consensus_8643#0      TAAGTTTTAGCCAATAGTAATAGTACTAGTGAGGATA 1828
consensus_8643#1      -------------------------------------
consensus_8643#2      -------------------------------------