These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8680#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1237 fasta sequence [CGCGTCCGCCCACGCGTCCG---GCATTTTGTCGTACACCTCGCCGTCCGTAGATTATTCCATTTTCCATCGAATAAAGGACGTGTGCAAGCAAAATGAAACCGTTGATGCTGCAAGGACATCAGCGTGCCATCACGCAAATCAAATACAACCGCGAGGGCGATCTGATCTTTTCCTCGGCCAAGGACAGCAAACCGAGCGTGTGGTACTCGCTGAACGGCGAGCGTCTCGGTACGTTCAATGGACACATCGGTGCCGTCTGGTGTGTCGACGTGGATTGGACGACGACCCGGTTGATTACCGGCGCCGGTGACATGAACACATTCTTGTGGGACGTTGAAACCGGTACAGCGCTGGGCAAGATTCCGTGCAACTCGTCCGTGCGTACGTGCAACTTTAGCTTCTCCGGCAACCAGGCCTCCTACTCGACGGATCGGGCGATGAACCACCCGTGCGAGCTGTTCGTGATCGATGTGCGAAACATCGACGCCAGCATCAGCAGTGCCGACCCAGTATTGAAGCTGACGATGAACGAGCAGCAAAGCAAGATCACGTCGATGCTGTGGGGCGCCCTGGACGAGACGGTCATTACCGGGCACGAGAACGG-TTCGCTGCGCATCTGGGATCTGCGCGCGGTGAAGGAGCTCAACTCGGTGAACGACCACACCGCCAGCATTACGGACATGCAGATGTCGAGCGACGGTACGATGTTCGTCTCGTCGTCGAAGGGTTGCTCCGCCAAGCTGTTCGATTCGGATTCGCTGATGTGCTTGAAGACGTTCAAAACCGAGCGGCCGGTCAACTCGGCCTGCATCAGCCCGCTGTTCGAGCTTGTCGCGCTC-GGCGGTGGCCAGGACGCGATGGAGGTCACCACGACCTCGACGCAGGCCGGCAAGTTCGATTCCCGCTTCTTCCATCTGGTGTACGAGGAGGAGTTTGCGCCTTCAAGTGTTTGACTCTTCGTACTACGAGCATACGTTCGAGTAGAGAGAGAGAGAGAGAGCGCGTCCTTTTTGTTGTGCTATTGTACTGAACGAGAATACAGCAAGAACGTACATAAAAAGAACATTAAACAAGCGACAGATCGTGCAGCGGTGTTAAGTAACTAGCGTGATAAGTGGAAAACGTGAAATCTCCCAGAGTGCGTAAATTTAACATCAACTAGCGCACATCCGACGGCGGGACCATGCGTATCGGTACCGGACGTCCTGGTGAATGGGAAAGGAATAAACGAGGGAGT] [+] EMBL BM645839 [CGCGTCCGCCCACGCGTCCG GCATTTTGTCGTACACCTCGCCGTCCGTAGATTATTCCATTTTCCATCGAATAAAGGACGTGTGCAAGCAAAATGAAACCGTTGATGCTGCAAGGACATCAGCGTGCCATCACGCAAATCAAATACAACCGCGAGGGCGATCTGATCTTTTCCTCGGCCAAGGACAGCAAACCGAGCGTGTGGTACTCGCTGAACGGCGAGCGTCTCGGTACGTTCAATGGACACATCGGTGCCGTCTGGTGTGTCGACGTGGATTGGACGACGACCCGGTTGATTACCGGCGCCGGTGACATGAACACATTTTTGTGGGACGTTGAAACCGGTACAGCGCTGGGCAAGATTCCGTGCAACTCGTCCGTGCGTACGTGCAACTTTAGCTTCTCCGGCAACCAGGCCTCCTACTCGACGGATCGGGCGATGAACCACCCGTGCGAGCTGTTCGTGATCGATGTGCGAAACATCGACGCCAGCATCAGCAGTGCCGACCCAGTATTGAAGCTGACGATGAACGAGCAGCAAAGCAAGAT ] [+] EMBL BM615594 [ CCGCGGACGCGTGGGTTTGCATTTTGTCGTACACCTCGCCGTCCGTAGATTATTCTATTTTCCATCGAATAAAGGACGTGTGCAAGCAAAATGAAACCGTTGATGCTGCAAGGACATCAGCGTGCCATCACGCAAATCAAATATAACCGCGAGGGCGATCTGATCTTTTCCTCGGCCAAGGACAGCAAACCGAGCGTGTGGTACTCGCTGAACGGCGAGCGTCTCGGTACGTTCAATGGACACATCGGTGCCGTCTGGTGTGTCGACGTGGATTGGACGACGACCCGGTTGATTACCGGCGCCGGTGACATGAACACATTCTTGTGGGACGTTGAAACCGGTACAGCGCTGGGCAAAATTCCGTGCAACTCGTCCGTGCGTACGTGCAACTTTAGCTTCTCCGGCAACCAGGCCTCCTACTCGACGGATCGGGCGATGAACCACCCGTGCGAGCTGTTCGTGATCGATGTGCGAAACATCGACGCCAGCATCAGCAGTGCCGACCCAGTATTGAAGCTGACGATGAACGAGCAGCAAAGCAAGATCACGTCGATGCTGTGGGGCGCCCTGGACGAGACGGTCATTACCGGGCACGAGAACGG CTCGCTGCGCATCTGGGATCTGCGCGCGGTGAAGGAGCTCAACTCGGTGAACGACCACACCGCCAGCATTACGGAC ] [+] EMBL CNS08NJ4 [ GTACACCTCGCCGTCCGTAGATTATTCCATTTTCCATCGAATAAAGGACGTGTGCAAGCAAAATGAAACCGTTGATGCTGCAAGGACATCAGCGTGCCATCACGCAAATCAAATACAACCGCGAGGGCGATCTGATCTTTTCCTCGGCCAAGGACAGCAAACCGAGCGTGTGGTACTCGCTGAACGGCGAGCGTCTCGGTACGTTCAATGGACACATCGGTGCCGTCTGGTGTGTCGACGTGGATTGGACGACGACCCGGTTGATTACCGGCGCCGGTGACATGAACACATTCTTGTGGGACGTTGAAACCGGTACAGCGCTGGGCAAGATTCCGTGCAACTCGTCCGTGCGTACGTGCAACTTTAGCTTCTCCGGCAACCAGGCCTCCTACTCGACGGATCGGGCGATGAACCACCCGTGCGAGCTGTTCGTGATCGATGTGCGAAACATCGACGCCAGCATCAGCAGTGCCGACCCAGTATTGAAGCTGACGATGAACGAGCAGCAAAGCAAGATCACGTCGATGCTGTGGGGCGCCCTGGACGAGACGGTCATTACCGGGCACGAGAACGG TTCGCTGCGCATCTGGGATCTGCGCGCGGTGAAGGAGCTCAACTCGGTGAACGACCACACCGCCAGCATTACGGACATGCAGATGTCGAGCGACGGTACGATGTTCGTCTCGTCGTCGAAGGGTTGCTCCGCCAAGCTGTTCGAAACGGATTCGCTGATGTGCTTGAAGACGTTCAAAACCGAGCGGCCGGTCAACTCGGCCTGCATCAGCCCGCTGTTCGAGCATGTCGCGCTC GGCGGTGGCCAGGACGCGATGGAGGTCACCACGACCTCGACGCAGGCCGGCAAGTTCGATTCCCGCTTCTTCCATCTGGTGTACGAGGAGGAGTTTGCGCCTTCAAGTGTTTGACTCTTCGTACTACGAGCATACGTTCGAGTAGAGAGAGAAAAAAAAAGCGCGTTCTTTTTGTTGTGCTATTGTACTGAACGAGAATAaca ] [-] EMBL CNS08NJ5 [ TGGACGACGACCCGGTTGATTACCGGCGCCGGTGACATGAACACATTCTTTTGGGACGTTGAAACCGGTACAGCGCTGGGCAAGATTCCGTGCAACTCGTCCGTGCGTACGTGCAACTTTAGCTTCTCCGGCAACCAGGCCTCCTACTCGACGGGTCGGGCGATGAACCACCCGTGCGAGCTGTTCGTGATCGATGTGCGAAACATCGACGCCAGCATCAGCAGTGCCGACCCTTTATTGAAGCTGACGATGAACGAGCAGCAAAGCAAGATCACGTCGATGCTTTGGGGCGCCCTGGACGAGACGGTCATTACCGGGCACGAGAACGGTTTCG TGCGCATCTGGGATCTGCGCGCGGTGAAGGAGCTCAACTCGGTGAACGACCACACCGCCAGCATTACGGACATGCAGATGTCGAGCGACGGTACGATGTTCGTCTCGTCGTCGAAGGGTT CTCCGCCAAGCTGTTCGATTCGGATTCGCTGATGTGCTTGAAGACGTTCAAAACCGAGCGGCCGGTCAACTCGGCCTGCATCAGCCCGCTGTTCGAGCTTGTCGCGCTC GGCGGTGGCCAGGACGCGATGGAGGTCACCACGACCTCGACGCAGGCCGGCAAGTTCGATTCCCGCTTCTTCCATCTGGTGTACGAGGAGGAGTTTGCGCCTTCAAGTGTTTGACTCTTCGTACTACGAGCATACGTTCGAGTAGAGAGAGAGAGAGAGAGCGCGTCCTTTTTGTTGTGCTATTGTACTGAACGAGAATACAGCAAGAACGTACATAAAAAGAACATTAAACAAGCGACAGATCGTGCAGCGGTGTTAAGTAACTAGCGTGATAAGTGGAAAACGTGAAATCTCCCAGAGTGCGTAAATTTAACATCAACTAGCGCACATCCGACGGCGGGACCATGCGTATCGGTACCGGACGTCCTGGTGAATGGGAAAGGAATAAACGAGGGAGT] [-] EMBL CNS08FMY [ CGTACGTGCAACTTTAGCTTCTCCGGCAACCAGGCCTCCTACTCGACGGATCGGGCGATGAACCACCCGTGCGAGCTGTTCGTGATCGATGTGCGAAACATCGACGCCAGCATCAGCAGTGCCGACCCAGTATTGAAGCTGACGATGAACGAGCAGCAAAGCAAGATCACGTCGATGCTGTGGGGCGCCCTGGACGAGACGGTCATTACCGGGCACGAGAACGG TTTCCTGCGCATCTGGGATCTGCGCGCGGTGAAGGAGCTCAACTCGGTGAACGACCACACCGCCAGCATTACGGACATGCAGATGTCGAGCGACGGTACGATGTTCGTCTCGTCGTCGAAGGGTTG TCCGCCAAGCTGTTCGATTCGGATTCGCTGATGTGCTTGAAGACGTTCAAAACCGAGCGGCCGGTCAACTCGGCCTGCATCAGCCCGCTGTTCGAGCTTTTCGCGCTCGGGCGGTGGCCAGGACGCGATGGAGGTCACCACGACCTCGACGCAGGCCGGCAAGTTCGATTCCCGCTTCTTCCCTCTGGTGTACGAGGAGGAGTTTGCGCCTTCAAGTGTTTGACTCTTCGTACTACGAGCATACGTTCGAGTAGAGAGAGAGAGAGAGAGCGCGTCCTTTTTGTTGTGCTATTGTACTGAACGAGAATACAGCAAGAACGTACATAAAAAGAACATTAAACAAGCGACAGATCGTGCAGCGGTGTTAAGTTACTAGCGTGATAAGTGGAAAACGTGAAATCTCCCAGAGTGCGTAAATTTAACATCAACTAGCGCACATCCGACGGCGGGACCATGCGTATCGGTACCGGACGTCCTGGTGAATGGGAAAGGAATAAACGAGGGA ] [-] EMBL CNS08CMV [ CGCGCATACGTTCGAGTAGAGAGAGAGAGAGAGAGCGCGTCCTTTTTGTTGTGCTATTGTACTGAACGAGAATACAGCAAGAACGTACATAAAAAGAACATTAAACAAGCGACAGAT ] consensusID : consensus_8680#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 737 fasta sequence [AAGGGTTTTCTCGAAAGGAAAAGATACAACAATCCACTGGCGGAAGGTGAAACGTTGCCAAAAGACGACTTTCTAAGCGCTTTTGCACGATGGAGGACGATTGGGAAGCACTGGCCGAACAGAAGGCCGAGCAGCTGTTTGCCAAGGCCGACGTGAACAAGTGGGCTGGCGAGGACGAGGACGATGTAAAGGACAACTGTGAGGATGACCACGAAGAAGTTGATCACCGTCTCGAGCAGACCGTGGTGTGGTGCTGGCCTGGCATTACAGGATAGGAGAAATTTAAAATGCACACACACACACACACATACACGCGCGCGCACACATATTCAATATTATAAAGGATAATGTAGGATGTATAGAAGGACTATTTACTTTAGCTCTGTGTGAGTGCGTGTGTGTGCGTGGGTAGGTGTTTGTGTGGGTACGTATCCTCAATGTTAATCGATACACAGTTTTGTTACATTTCAACTCGTTTTTGATAACTACTACTACTACTCGATACTACTACTAGCATGACAGTCTTAGAAAGTCGGAATCAGAGCCCCGAACACGAGGGAGGTGTGTAGGATAGAGAATGGGAGTGTGCGTGTGCACGCATAAAAGCATAAAAAAGAGGAAGCAGGAAGTGTGCATACCAACATAACTGATAACAGTCACCAGCTACCAGAATTTTAACAACAACAAAAAACTCTTTCCTTCACGTTTGGCAATTACTCTGTAGTAGGTTGTTCTAG] [+] EMBL BX616141 [AAGGGTTTTCTCGAAAGGAAAAGATACAACAATCCACTGGCGGAAGGTGAAACGTTGCCAAAAGACGACTTTCTAAGCGCTTTTGCACGATGGAGGACGATTGGGAAGCACTGGCCGAACAGAAGGCCGAGCAGCTGTTTGCCAAGGCCGACGTGAACAAGTGGGCTGGCGAGGACGAGGACGATGTAAAGGACAACTGTGAGGATGACCACGAAGAAGTTGATCACCGTCTCGAGCAGACCGTGGTGTGGTGCTGGCCTGGCATTACAGGATAGGAGAAATTTAAAATGCACACACACACACACACATACACGCGCGCGCACACATATTCAATATTATAAAGGATAATGTAGGATGTATAGAAGGACTATTTACTTTAGCTCTGTGTGAGTGCGTGTGTGTGCGTGGGTAGGTGTTTGTGTGGGTACGTATCCTCAATGTTAATCGATACACAGTTTTGTTACATTTCAACTCGTTTTTGATAACTACTACTACTACTCGATACTACTACTAGCATGACAGTCTTAGAAAGTCGGAATCAGAGCCCCGAACACGAGGGAGGTGTGTAGGATAGAGAATGGGAGTGTGCGTGTGCACGCATAAAAGCATAAAAAAGAGGAAGCAGGAAGTGTGCATACCAACATAACTGATAACAGTCACCAGCTACCAGAATTTTAACAACAACAAAAAACTCTTTCCTTCACGTTTGGCAATTACTCTGTAGTAGGTTGTTCTAG] consensusID : consensus_8680#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 672 fasta sequence [CCGCCCACGCGTCCGATCCGTCCTCCCCGGAGGCGGATGTGCAAAACGAAGAAGAAGAAGAAGAAGAAGCAGAAGAAGAAGAAACCGCAAATGGCTCCACCGACGATCGGCAGAACGGTATTGGCTGAACAACAACATCCCCCCCTCAAAGCCAGACAGTAGTGCAGCGCCTCCAATTCTCCTCCGTGCTGCCGTGTGCGTGACGGCCACGTGATGCCTGCGAAGCCTGGGACTGCTGCGCGGGTTCTACCGTCGTCGATGGCTGCCCAACTTGCGATGTCCGACCTACGGCGAATTCCGATCCGATGATACCTGCCTATCCACGGGATGCCTCTGCGTGTGTGTGTCCCTCCCTTCCCCCTGTTCCCTCCCCTTTTGCGGGTTGAGCGGTACCGGTTGTTGAAGCAGGGACTGCGCCCCGACACCCCCCCGTGGACTGGCCAGCTCCATGGCTCGCATAAACGAACGCGGGCTAAACCCGTTCACTTTGAGGAGATTAAACTAAACAACACCGTATAGAATGGTCACGAACACGGATGGGGCTGTGGAGCCAGCTGCTGTGTCACGCGATTGGACGTAGTGTCGTCTCCTCCAAGCCGACCATGAAATAAAAAACATACCGTTCCCTGGAGCTCCAAACTCCGGGAATGATGAGAGTTAGAAAATCGAGCA] [+] EMBL BM636067 [CCGCCCACGCGTCCGATCCGTCCTCCCCGGAGGCGGATGTGCAAAACGAAGAAGAAGAAGAAGAAGAAGCAGAAGAAGAAGAAACCGCAAATGGCTCCACCGACGATCGGCAGAACGGTATTGGCTGAACAACAACATCCCCCCCTCAAAGCCAGACAGTAGTGCAGCGCCTCCAATTCTCCTCCGTGCTGCCGTGTGCGTGACGGCCACGTGATGCCTGCGAAGCCTGGGACTGCTGCGCGGGTTCTACCGTCGTCGATGGCTGCCCAACTTGCGATGTCCGACCTACGGCGAATTCCGATCCGATGATACCTGCCTATCCACGGGATGCCTCTGCGTGTGTGTGTCCCTCCCTTCCCCCTGTTCCCTCCCCTTTTGCGGGTTGAGCGGTACCGGTTGTTGAAGCAGGGACTGCGCCCCGACACCCCCCCGTGGACTGGCCAGCTCCATGGCTCGCATAAACGAACGCGGGCTAAACCCGTTCACTTTGAGGAGATTAAACTAAACAACACCGTATAGAATGGTCACGAACACGGATGGGGCTGTGGAGCCAGCTGCTGTGTCACGCGATTGGACGTAGTGTCGTCTCCTCCAAGCCGACCATGAAATAAAAAACATACCGTTCCCTGGAGCTCCAAACTCCGGGAATGATGAGAGTTAGAAAATCGAGCA] consensusID : consensus_8680#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 671 fasta sequence [CCGGGTGGACGCGCGAAGCGATAGCGTGGTCGCGGTTACAAACGTTGAACTCGCCAATTGGCATAGCAACCTGTGCCTCGATAGGCCGCGCCGTGTATTTTCCTCCGTTCTCCCGTGCGCTAAATGTTTCGAGCCGTTTGAACTGCTTATCATCAGACAGCAAACAGACAGCAGACGGCCGGCTTGCACTATGCTGCTGCGAACCGTGATACTGGTGGCCCTTGCCTTGTCGCAAGGTACCGAGGCGTACAAAGTGCTCGGACTGTTCCCGCATCCCGGCCAGAGTCACTTCCACTTCTTTCAGCCCGTCCTGAAAGGGCTGGCAGAGGCCGGCCATGAGGTAACGGTCGTCAGCCACTTCCCGGAGAAGAATCCACCGGCGAACTATCACGATCTGCCGCTCGCCGGCATGACATCGCTGTCGGATTCGGTCAGCTTTGAGGTAGGTCAGCTGGAATATATCCAGTGAAGTGATCGATGATCATCAGCCGAAAACTAACAACAATCACTGTGTGTGTGTGATCGCTTGTTGTGCTCGCCTCGCACAAGTGTTTGCGGTTAATTTTCCCCGGGCGCGCGCGCACTTGTCAGTTGGCAATTTGAAATGTTATGATGCCGCTTGCTAGGGCACACACAGCTACCGTGCCCGCGATGTAGAACTTCAAAGGAAA] [+] EMBL BM630484 [CCGGGTGGACGCGCGAAGCGATAGCGTGGTCGCGGTTACAAACGTTGAACTCGCCAATTGGCATAGCAACCTGTGCCTCGATAGGCCGCGCCGTGTATTTTCCTCCGTTCTCCCGTGCGCTAAATGTTTCGAGCCGTTTGAACTGCTTATCATCAGACAGCAAACAGACAGCAGACGGCCGGCTTGCACTATGCTGCTGCGAACCGTGATACTGGTGGCCCTTGCCTTGTCGCAAGGTACCGAGGCGTACAAAGTGCTCGGACTGTTCCCGCATCCCGGCCAGAGTCACTTCCACTTCTTTCAGCCCGTCCTGAAAGGGCTGGCAGAGGCCGGCCATGAGGTAACGGTCGTCAGCCACTTCCCGGAGAAGAATCCACCGGCGAACTATCACGATCTGCCGCTCGCCGGCATGACATCGCTGTCGGATTCGGTCAGCTTTGAGGTAGGTCAGCTGGAATATATCCAGTGAAGTGATCGATGATCATCAGCCGAAAACTAACAACAATCACTGTGTGTGTGTGATCGCTTGTTGTGCTCGCCTCGCACAAGTGTTTGCGGTTAATTTTCCCCGGGCGCGCGCGCACTTGTCAGTTGGCAATTTGAAATGTTATGATGCCGCTTGCTAGGGCACACACAGCTACCGTGCCCGCGATGTAGAACTTCAAAGGAAA] consensusID : consensus_8680#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 646 fasta sequence [CCGCCCACGCGTCCGCCCACGCGTCCGCGCAGACACAGTACAAATAGAAAAATAATAATGTCCGATTCCGGATATTTATCACGTGCCATTGCCGGTGATGTGTAAATTCCCGTGTATTCCGGGATTCCTTCCGCTCTGCCCGGGACGGACGATTTTTCATCTTCAGCTAGCAAAACATGCCCACGCCACCACCAACCCTCTTGCTCAGTAGAACTGTCAGAAAGCAAATAAATTTTACAATTCCGTTCCATATCCGATCGTTCGCACACAAACACACACACACACACTCGGTAGCTTTCTATTTGGTGCCCGAACGGGTGCAAACGCTTCACGTTGCCCGTTTGCCTTTCAGTGGAATTGTTTTAGTTCAGTGATTTTCCTTCCCCCTTTCCCCCACCAGTGAAATCTCTTGAGACGGCAGGAAGGCAAGGCACGGAGTGATTCTTCATCTTTTGCCCCAAGGCCACCGCCACTGCTAGCGGAACCGGAACCGGGCTAAAGTGGCTATTTTTCTTGACTCGTTCCGCTCCCGGTCAATGGCCAGACGATCACGCTGCCTGCCGATGCCGATGATGGCGACGGTGATGATGATGATGATGATGACGATGGAATTTATCGAAATTGCTTGCAGGGAAACAAGATCGAC] [+] EMBL BM639367 [CCGCCCACGCGTCCGCCCACGCGTCCGCGCAGACACAGTACAAATAGAAAAATAATAATGTCCGATTCCGGATATTTATCACGTGCCATTGCCGGTGATGTGTAAATTCCCGTGTATTCCGGGATTCCTTCCGCTCTGCCCGGGACGGACGATTTTTCATCTTCAGCTAGCAAAACATGCCCACGCCACCACCAACCCTCTTGCTCAGTAGAACTGTCAGAAAGCAAATAAATTTTACAATTCCGTTCCATATCCGATCGTTCGCACACAAACACACACACACACACTCGGTAGCTTTCTATTTGGTGCCCGAACGGGTGCAAACGCTTCACGTTGCCCGTTTGCCTTTCAGTGGAATTGTTTTAGTTCAGTGATTTTCCTTCCCCCTTTCCCCCACCAGTGAAATCTCTTGAGACGGCAGGAAGGCAAGGCACGGAGTGATTCTTCATCTTTTGCCCCAAGGCCACCGCCACTGCTAGCGGAACCGGAACCGGGCTAAAGTGGCTATTTTTCTTGACTCGTTCCGCTCCCGGTCAATGGCCAGACGATCACGCTGCCTGCCGATGCCGATGATGGCGACGGTGATGATGATGATGATGATGACGATGGAATTTATCGAAATTGCTTGCAGGGAAACAAGATCGAC] consensusID : consensus_8680#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 83 fasta sequence [CGCTTTTTTATTTTAAAAACTGCCTCGCCGGCATTTCCCAAAAAATGGAAAAGTCCGAAAGGGGGAATATATACAGCACGTCA] [+] EMBL CNS08J6U [CGCTTTTTTATTTTAAAAACTGCCTCGCCGGCATTTCCCAAAAAATGGAAAAGTCCGAAAGGGGGAATATATACAGCACGTCA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_8680#0 CGCGTCCGCCCACGCGTCCGGCATTTTGTCGTACACCTCGCCGTCCGTAGATTATTCCAT 60 consensus_8680#5 ------------------------------------------------------------ consensus_8680#4 ------------------------------------------------------------ consensus_8680#2 ------------------------------------------------------------ consensus_8680#1 ------------------------------------------------------------ consensus_8680#3 ------------------------------------------------------------ consensus_8680#0 TTTCCATCGAATAAAGGACGTGTGCAAGCAAAATGAAACCGTTGATGCTGCAAGGACATC 120 consensus_8680#5 ------------------------------------------------------------ consensus_8680#4 ------------------------------------------------------------ consensus_8680#2 ------------------------------------------------------------ consensus_8680#1 ------------------------------------------------------------ consensus_8680#3 ------------------------------------------------------------ consensus_8680#0 AGCGTGCCATCACGCAAATCAAATACAACCGCGAGGGCGATCTGATCTTTTCCTCGGCCA 180 consensus_8680#5 ------------------------------------------------------------ consensus_8680#4 ------------------------------------------------------------ consensus_8680#2 ------------------------------------------------------------ consensus_8680#1 --------------------------------------------------AAGGGTTTTC 10 consensus_8680#3 ------------------------------------------------------------ consensus_8680#0 AGGACAGCAAACCGAGCGTGTGGTACTCGCTGAACGGCGAGCGTCTCGGTACGTTCAATG 240 consensus_8680#5 ------------------------------------------------------------ consensus_8680#4 ------------------------------------------------------------ consensus_8680#2 ------------------------------------------------------------ consensus_8680#1 TCGAAAGGAAAAGATACAACAATCCACTGGCGGAAGGTGAAACGTTGCCAAAAGACGACT 70 consensus_8680#3 ------------------------------------------------------------ consensus_8680#0 GACACATCGGTGCCGTCTGGTGTGTCGACGTGGATTGGACGACGACCCGGTTGATTACCG 300 consensus_8680#5 ------------------------------------------------------------ consensus_8680#4 ---------------------------------------------CCGCCCACGCGTCCG 15 consensus_8680#2 --------CCGCCCACGCGTCCGATCCGTCCTCCCCGGAGGCGGATGTGCAAAACGAAGA 52 consensus_8680#1 TTCTAAGCGCTTTTGCACGATGGAGGACGATTGGGAAGCACTGGCCGAACAGAAGGCCGA 130 consensus_8680#3 -----------CCGGGTGGACGCGCGAAGCGATAGCGTGGTCGCGGTTACAAACGTTGAA 49 consensus_8680#0 GCGCCGGTGACATGAACACATTCTTGTGGGACGTTGAAACCGGTACAGCGCTGGGCAAGA 360 consensus_8680#5 ------------------------------------------------------------ consensus_8680#4 CCCACGCGTCCGCGCAGACACAGTACAAATAGAAAAATAATAATGTCCGATTCCGGATAT 75 consensus_8680#2 AGAAGAAGAAGAAGAAGCAGAAGAAGAAGAAACCGCAAATGGCTCCACCGACGATCGGCA 112 consensus_8680#1 GCAGCTGTTTGCCAAGGCCGACGTGAACAAGTGGGCTGGCGAGGACGAGGACGATGTAAA 190 consensus_8680#3 CTCGCCAATTGGCATAGCAACCTGTGCCTCGATAGGCCGCGCCGTGTATTTTCCTCCGTT 109 consensus_8680#0 TTCCGTGCAACTCGTCCGTGCGTACGTGCAACTTTAGCTTCTCCGGCAACCAGGCCTCCT 420 consensus_8680#5 ------------------------------------------------------------ consensus_8680#4 TTATCACGTGCCATTGCCGGTGATGTGTAAATTCCCGTGTATTCCGGGATTCCTTCCGCT 135 consensus_8680#2 GAACGGTATTGGCTGAACAACAACATCCCCCCCTCAAAGCCAGACAGTAGTGCAGCGCCT 172 consensus_8680#1 GGACAAC--TGTGAGGATGACCACGAAGAAGTTGATCACCGTCTCGAGCAGACCGTGGTG 248 consensus_8680#3 CTCCCGTGCGCTAAATGTTTCGAGCCGTTTGAACTGCTTATCATCAGACAGCAAACAGAC 169 consensus_8680#0 ACTCGACGGATCGGGCGATGAACCACCCGTGCGAGCTGTTCGTGATCGATGTGCGAAACA 480 consensus_8680#5 ------------------------------------------------------------ consensus_8680#4 CTGCCCGGGACGGACGATTTTTCATCTTCAGCTAGCAAAACATGCCCACGCCACCACCAA 195 consensus_8680#2 CCAATTCTCCTCCGTGCTGCCGTGTGCGTGACGGCCACGTGATGCCTGCGAAGCCTGGGA 232 consensus_8680#1 TGGTGCTGGCCTGGCATTACAGGATAGGAGAAATTTAAAATGCACACACACACACACACA 308 consensus_8680#3 AGCAGACGGCCGGCTTGCACTATGCTGCTGCGAACCGTGATACTGGTGGCCCTTGCCTTG 229 consensus_8680#0 TCGACGCCAGCATCAGCAGTGCCGACCCAGTATTGAAGCTGACGATGAACGAGCAGCAAA 540 consensus_8680#5 ------------------------------------------------------------ consensus_8680#4 CCCTCTTGCTCAGTAGAACTGTCAGAAAGCAAATAAATTTTACAATTCCGTTCCATATCC 255 consensus_8680#2 CTGCTGCGCGGGTTCTACCGTCGTCGATGGCTGCCCAACTTGCGATGTCCGACCTACGGC 292 consensus_8680#1 TACACGCGCGCGCACACATATTCAATATTATAAAGGATAATGTAGGATGTATAGAAGGAC 368 consensus_8680#3 TCGCAAGGTACCGAGGCGTACAAAGTGCTCGGACTGTTCCCGCATCCCGGCCAGAGTCAC 289 consensus_8680#0 GCAAGATCACGTCGATGCTGTGGGGCGCCCTGGAC-GAGACGGTCATTACCGGGCACGAG 599 consensus_8680#5 ------------------------------------------------------------ consensus_8680#4 GATCGTTCGCACACAAACACACACACACACACTCG-GTAGCTTTCTATTTGGTGCCCGAA 314 consensus_8680#2 GAATTCCGATCCGATGATACCTGCCTATCCACGGG-ATGCCTCTGCGTGTGTGTGTCCCT 351 consensus_8680#1 TATTTACTTTAGCTCTGTGTGAGTGCGTGTGTGTGCGTGGGTAGGTGTTTGTGTGGGTAC 428 consensus_8680#3 TTCCACTTCTTTCAGCCCGTCCTGAAAGGGCTGGCAGAGGCCGGCCATGAGGTAACGGTC 349 consensus_8680#0 AACGGTTCGCTGCG-CATCTGGGATCTGCGCGCGGTGAAGGAGCTCAACTCGGT-GAACG 657 consensus_8680#5 -----------------------------------------CGCTTTTTTATTT-TAAAA 18 consensus_8680#4 CGGGTGCAAACGCTTCACGTTGCCCGTTTGCCTTTCAGTGGAATTGTTTTAGTT-CAGTG 373 consensus_8680#2 CCCTTCCCCCTGTTCCCTCCCCTTTTGCGGGTTGAGCGGTACCGGTTGTTGAAG-CAGGG 410 consensus_8680#1 GTATCCTCAATGTTAATCGATACACAGTTTTGTTACATTTCAACTCGTTTTTGA-TAACT 487 consensus_8680#3 GTCAGCCACTTCCCGGAGAAGAATCCACCGGCGAACTATCACGATCTGCCGCTCGCCGGC 409 consensus_8680#0 ACCACACCGCCAGCATTAC---GGACATGCAGATGTCGAGCGACGGTACGATGTTCGTCT 714 consensus_8680#5 ACTGCCTCGCCGGCATTTCCCAAAAAATGGAAAAGTCCGAAAGGGGGAATATATACAGCA 78 consensus_8680#4 ATTTTCCTTCCCCCTTTCCCCCACCAGTGAAATCTCTTGAGACGGCAGGAAGGCAAGGCA 433 consensus_8680#2 ACTGCGCC-CCGACACCCCCCCGTGGACTGGCCAGCTCCATGGCTCGCATAAACG-AACG 468 consensus_8680#1 ACTACTACTACTCGATACTACTACTAGCATGACAGTCTTAGAAAGTCGGAATCAGAGCCC 547 consensus_8680#3 ATGACATCGCTGTCGGATT-CGGTCAGCTTTGAGGTAGGTCAGCTGGAATATATCCAGTG 468 * * consensus_8680#0 CGTCGTCGAAGGGTTGCTCCGCCAAGCTGTTCGATTCGGATTCGCTGATGTGCTTGAAGA 774 consensus_8680#5 CGTCA------------------------------------------------------- 83 consensus_8680#4 CGG-AGTGATTCTTCATCTTTTGCCCCAAGGCCACCGCCACTGCTAGCGGAACCGGAACC 492 consensus_8680#2 CGGGCTAAACCCGTTCACTTTGAGGAGATTAAACTAAACAACACCGTATAGAATGGTCAC 528 consensus_8680#1 CG--AACACGAGGGAGGTGTGTAGGATAGAGAATGGGAGTGTGCGTGTGCACGCATAAAA 605 consensus_8680#3 AAGTGATCGATGATCATCAGCCGAAAACTAACAACAATCACTGTGTGTGTG--TGATCGC 526 consensus_8680#0 CGTTCAAAACCGAGCGGCCGGTCAACTCGGCCTGCATCAGCCCGCTGTTCGAGCTTGTCG 834 consensus_8680#5 ------------------------------------------------------------ consensus_8680#4 GGGCTAAAGTGGCTATTTTTCTTGACTCGTTCCGCTCCCGGTCAATGGCCAGACGATCAC 552 consensus_8680#2 GAACACGGATGGGGCTGTGGAGCCAGCTGCTGTGTCACGCGATTGGACGTAGTGTCGTCT 588 consensus_8680#1 GCATAAAAAAGAGGAAGCAGGAAGTGTGCATACCAACATAACTGATAACAGTCACCAGCT 665 consensus_8680#3 TTGTTGTGCTCGCCTCGCACAAGTGTTTGCGGTTAATTTTCCCCGGGCGCGCGCGCACTT 586 consensus_8680#0 CGCTCGGCGGTGGCCAGGACGCGATGGAGGTCACCACGACCTCGACGCAGGCCGGCAAGT 894 consensus_8680#5 ------------------------------------------------------------ consensus_8680#4 GCTGCCTGCCGATGCCGATGATGGCGACGGTGATGATGATGATGATGATGACGATGGAAT 612 consensus_8680#2 CCTCCAAGCCGACCATGAAATAAAAAACATACCGTTCCCTGGAGCTCCAAACTCCGGGAA 648 consensus_8680#1 ACCAGAATTTTAACAACAACAAAAAACTCTTTCCTTCACGTTTGGCAATTACTCTGTAGT 725 consensus_8680#3 GTCAGTTGGCAATTTGAAATGTTATGATGCCGCTTGCTAGGGCACACACAGCTACCGTGC 646 consensus_8680#0 TCGATTCCCGCTTCTTCCATCTGGTGTACGAGGAGGAGTTTGCGCCTTCAAGTGTTTGAC 954 consensus_8680#5 ------------------------------------------------------------ consensus_8680#4 TTATCGAAATTGCTTGCAGGGAAACAAGATCGAC-------------------------- 646 consensus_8680#2 TGATGAGAGTTAGAAAATCGAGCA------------------------------------ 672 consensus_8680#1 AGGTTGTTCTAG------------------------------------------------ 737 consensus_8680#3 CCGCGATGTAGAACTTCAAAGGAAA----------------------------------- 671 consensus_8680#0 TCTTCGTACTACGAGCATACGTTCGAGTAGAGAGAGAGAGAGAGAGCGCGTCCTTTTTGT 1014 consensus_8680#5 ------------------------------------------------------------ consensus_8680#4 ------------------------------------------------------------ consensus_8680#2 ------------------------------------------------------------ consensus_8680#1 ------------------------------------------------------------ consensus_8680#3 ------------------------------------------------------------ consensus_8680#0 TGTGCTATTGTACTGAACGAGAATACAGCAAGAACGTACATAAAAAGAACATTAAACAAG 1074 consensus_8680#5 ------------------------------------------------------------ consensus_8680#4 ------------------------------------------------------------ consensus_8680#2 ------------------------------------------------------------ consensus_8680#1 ------------------------------------------------------------ consensus_8680#3 ------------------------------------------------------------ consensus_8680#0 CGACAGATCGTGCAGCGGTGTTAAGTAACTAGCGTGATAAGTGGAAAACGTGAAATCTCC 1134 consensus_8680#5 ------------------------------------------------------------ consensus_8680#4 ------------------------------------------------------------ consensus_8680#2 ------------------------------------------------------------ consensus_8680#1 ------------------------------------------------------------ consensus_8680#3 ------------------------------------------------------------ consensus_8680#0 CAGAGTGCGTAAATTTAACATCAACTAGCGCACATCCGACGGCGGGACCATGCGTATCGG 1194 consensus_8680#5 ------------------------------------------------------------ consensus_8680#4 ------------------------------------------------------------ consensus_8680#2 ------------------------------------------------------------ consensus_8680#1 ------------------------------------------------------------ consensus_8680#3 ------------------------------------------------------------ consensus_8680#0 TACCGGACGTCCTGGTGAATGGGAAAGGAATAAACGAGGGAGT 1237 consensus_8680#5 ------------------------------------------- consensus_8680#4 ------------------------------------------- consensus_8680#2 ------------------------------------------- consensus_8680#1 ------------------------------------------- consensus_8680#3 ------------------------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||