cluster # 8713

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Anopheles gambiae
cluster # 8713 cluster # 8713 Sequences # 11 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8713#0 length = 1497 sequences # 8
consensus_8713#1 length = 707 sequences # 1

consensus_8713#2 length = 596 sequences # 1
consensus_8713#3 length = 304 sequences # 1

consensusID : consensus_8713#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1497
fasta sequence

                              [CCGGTTTGTGTGTTTTATTGCGTTTTTCCCCCATCTATTGTCGTAAATGCCAGTTTTAGAAGAAGGAAGAGTAGGAATTACGTAGATCTGTAGCAAGGACAGCAGAAGAAGCGTGAAACTAAGCATGGAATCCCAATCTGCCTTACGGAAGGTGGTTTTGCATATT-TGTTTTGCGA-AGAAATGTGACCGAGAATGGAACGATATTTACGCAACAAAGCGTGAACATGTGAAGCCTGAAGCCGAAAACAATGCACCATTCGCGTGTGTATCCTGTGCCGAATGCAACGGCTGAGCAGTGGATAGGACAAGCAGGACAGGAGGGGAGGTGTTCCAGCAAATATCATCCTCAAACTATCGGCAAAACACTT-CACCCGAATGGA-CGGAGAAGG-CACA-CCGCCTGGTTGGTTTAGCGTAAAAG-AACCAA----AACTCACCAAATCAATCTAAAACAGAAACAGTTTAATGGTGGAACAAACGCATACACACTCAATAAGATCGGAGCCAGAAAAGCCAAAATGTTGAGCGGATGTTAAAGTTTGGCAAAAGGTTAAATTGGAAGACGATAGTGAACGATGGAAGTTTGCTTTCAATATTTTATTTTGTTCGTTTGCTTTAAACTTCGTAAGTATGAGCTACAACAGCAGTAGGACGATATGGATGGTAGGCATCTTTTGCGGCTATTCACTTCTTATTTTATACGCAAGGCTTGGCTTGCGCAAGTGTGTGTTGAATATTATTATGATTA-TTTTTGGTATTACTTCATATTGATATTCTAAACATTAGGATGCACAATGAGGTTTAATATACAGAAGATTTTAGAACTGGTTTTAATTTGTAATTGAAGCATGTTCCTTGCATGCTGTTCATTATGATTTAATGTCTATCGAGCTCTAATGGAAGTACATTATGTTTTTGATCTATTTTTTATGTTATTTCTATAAACACATTAATGAAAGGAGAAAGCATTTCTACCATACTTGTCGGATGTTTAATGATTTTCGTGATCTTCAAAAAAAAATATGAGGCGTAATTGATAACATGCAGAAAACAATTGCTAAAGGGAGAACTTTTTCGTCACCGCAAATGCTGGGAGAAGAAAGGTTGTTAAGGTCGTGGTGTGGAGCATAGGAACAGTGGAAGAAGTAGCAGAAGACTAGGAATATCGGGGAGAGCAGGCTGCTGTAGTAGCCAAATAGGTGGGACCGTTTGCCGTCGTGTGGTGGAGCCGGTGTTAGATTTTAGTTGAACTGGGAGCATCCCGTGCGCAGTCCTCCCCCAAACACATCCATGCCCGTTAAAATTACGATTAAAGAACGGCAAGTAAAACCAACAAAGCAAAGCAAACAAAACAAAACAAAAAAAAAGCAAAATGCATATATACAAGCGAAGGAGAGCGGGAAGTGGAGGTACAGAAACAAACCTAAAATCAAACAAAACTATGTAAGATAGGTGTGCGTGTGTATGTGTAAAACGAATACACTTAAAAAATCGAAAAAAAAA]

[+] EMBL BM629524             [CCGGTTTGTGTGTTTTATTGCGTTTTTCCCCCATCTATTGTCGTAAATGCCAGTTTTAGAAGAAGGAAGAGTAGGAATTACGTAGATCTGTAGCAAGGACAGCAGAAGAAGCGTGAAACTAAGCATGGAATCCCAATCTGCCTTACGGAAGGTGGTTTTGCATATT TGTTTTGCGA AGAAATGTGACCGAGAATGGAACGGTATTTACGCAACAAAGCGTGAACATGTGAAGCCTGAAGCCGAAAACAATGCACCATTCGCGTGTGTATCCTGTGCCGAATGCAACGGCTGAGCAGTGGATAGGACAAGCAGGACAGGAGGGGAGGTGTTCCAGCAAATATCATCCTCAAACTATCGGCAAAACACTT CACCCGAATGGA CGGAGAAGG CACA CCGCCTGGTTGGTTTAGCGTAAAAG AACCAA    AACTCACCAAATAAATCTAAAACAGAAACAGTTTAATGGTGGAACAAACGCATACACACTCAATAAGATCGGAGCCAGAAAAGCCAAAATGTTGAGCGGATGTTAAAGTTTGGCAAAAGGTTAAATTGGAAGACGATAGTGAACGATGGAAGTTTGCTTTCAATATTTTATTTTGTTCGTTTGCTTTAAACTTCGTAAGTATGAGCTACAACAGCAGTAGGACGATATGGATGGTAGGCATCTTTTGCGGCTATTCACTTCTTATTTTATACGCAAGGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL BX626841             [                                                                                                                     cCTAAGCATGGAATCCCAATCTGCCTTACGGAAGGTGGTTTTGCATATT TGTTTTGCGA AGAAATGTGACCGAGAATGGAACGATATTTACGCAACAAAGCGTGAACATGTGAAGCCTGAAGCCGAAAACAATGCACCATTCGCGTGTGTATCCTGTGCCGAATGCGACGGCAGAGCAGTGGACAGGACAAGCAGGACAGGAGGGGAGGTGTTCCAGCAAATATCATCCTCAAACTATCGGCAAAACACTT CACCCTGATGGA CGGAGAAGG CACA CCGCCTGGTTGGTTTAGCGTAAAAG AACCAA    AACTCACCAAATCAATCTAAAACAGAAACAGTTTAATGGTGGAACAAACGCATACACACTCAATAAGATCGGAGCCAGAAAAGCCAAAATGTTGAGCGGATGTTAAAGTTTGGCAAAAGGTTAAATTGGAAGACGATAGTGAACGATGGAAGTTTGCTTTCAATATTTTATTTTGTTCGTTTGCTTTAAACTTCGTAAGTATGAGCTACAAAAGCAGTAGGACGATATGGATGGTAGGCATCTTTTGCGGCTATTCACTTCTTATTTTATACGCAANGCTTGGCTTGCGCAAGTTTGTGTTGAATATTATTATGATTATTTTTTGGGATTACTTCATATTGATATTCTAAACATT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL BX619836             [                                                                                                                                       ATCTGCCTTACGGAAGGTGGTTTTGCATATTNTGTTTTGCGANTGAAATGTGACCGAGAATGGAACGATATTTACGCAACAAAGCGTGAACATGTGAAGCCTGAAGCCGAAAACAATGCACCATTCGCGTGTGTATCCTGTGCCGAATGCGACGGCAGAGCAGTGGACAGGACAAGCAGGACAGGAGGGGAGGTGTTCCAGCAAATATCATCCTCAAACTATCGGCAAAACACTTCCACCCTGATGGACCGGAGAAGGCCACACCCGCCTGGTTGGTTTAGCGTAAAAG AACCCATNTTATCTCACCAAATCAATCTAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL BM648648             [                                                                                                                                                                                                             ccgACGCAACAAAGCGTGAACATGTGAAGCCTGAAGCCGAAAACAATGCACCATTCGCGTGTGTATCCTGTGCCGAATGCAACGGCTGAGCAGTGGATAGGACAAGCAGGACAGGAGGGGAGGTGTTCCAGCAAATATCATCCTCAAACTATCGGCAAAACACTT CACCCGAATGGA CGGAGAAGG CACA CCGCCTGGTTGGTTTAGCGTAAAAG AACCAA    AACTCACCAAATCAATCTAAAACAGAAACAGTTTAATGGTGGAACAAACGCATACACACTCAATAAGATCGGAGCCAGAAAAGCCAAAATGTTGAGCGGATGTTAAAGTTTGGCAAAAGGTTAAATTGGAAGACGATAGTGAACGATGGAAGTTTGCTTTCAATATTTTATTTTGTTCGTTTGCTTTAAACTTCGTAAGTATGAGCTACAACAGCAGTAGGACGATATGGATGGTAGGCATCTTTTGCGGCTATTCACTTCTTATTTTATACGCAAGGCTTGGCTTGCGCAAGTGTGTGTTGAATATTATTATGATTA TTTTTGGTATTACTTCACATTGATATTCTAAACATTAGGATGCACAATGAGGTTTAATATACAGAAGATTTTAGAACTGGTTTTAATTTGTAATTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL BM593854             [                                                                                                                                                                                                                                                                                                                                                                                                                               ccgcccAAGTAACCAA    AACTCACCAAATCAATCTAAAACAGAAACAGTTTAATGGTGGAACAAACGCATACACACTCAATAAGATCGGAGCCAGAAAAGCCAAAATGTTGAGCGGATGTTAAAGTTTGGCAAAAGGTTAAATTGGAAGACGATAGTGAACGATGGAAGTTTGCTTTCAATATTTTATTTTGTTCGTTTGCTTTAAACTTCGTAAGTATGAGCTACAACAGCAGTAGGACGATATGGATGGTAGGCATCTTTTGCGGCTATTCACTTCTTATTTTATACGCAAGGCTTGGCTTGCGCAAGTGTGTGTTGAATATTATTATGATTA TTTTTGGTATTACTTCACATTGATATTCTAAACATTAGGATGCACAATGAGGTTTAATATACAGAAGATTTTAGAACTGGTTTTAATTTGTAATTGAAGCATGTTCCTTGCATGCTGTTCATTATGATTTAATGTCTATCGAGCTCTAATGGAAGTACATTATGTTTTTGATCTATTTTTTATGTTATTTCTATAAACACATTAATGAAAGGAGAAAGCATTTCTACCATACTTGTCGGATGTTTAATGATTTTCGTGATCTTCAAAAAAAAATATGAGGCGTAATTGATAACATGCAGAAAACAATT                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL BX627306             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                agcCTGAAGCCGAAACAGTTTAATGGTGGAACAAACGCATACACACTCAATAAGATCGGAGCCAGAAAAGCCAAAATGTTGAGCGGATGTTAAAGTTTGGCAAAAGGTTAAATTGGAAGACGATAGTGAACGATGGAAGTTTGCTTTCAATATTTTATTTTGTTCGTTTGCTTTAAACTTCGTAAGTATGAGCTACAAAAGCAGTAGGACGATATGGATGGTAGGCATCTTTTGCGGCTATTCACTTCTTATTTTATACGCAAGGCTTGGCTTGCGCAAGTTTGTGTTGAATATTATTATGATTA TTTTTGGTATTACTTCATATTGATATTCTAAACATTAGGATGCATAATGAGGTTTAATATACAGAAGATTTTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL BM624106             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ccgCAAACGCATACACACTCAATAAGATCGGAGCCAGAAAAGCCAAAATGTTGAGCGGATGTTAAAGTTTGGCAAAAGGTTAAATTGGAAGACGATAGTGAACGATGGAAGTTTGCTTTCAATATTTTATTTTGTTCGTTTGCTTTAAACTTCGTAAGTATGAGCTACAACAGCAGTAGGACGATATGGATGGTAGGCATCTTTTGCGGCTATTCACTTCTTATTTTATACGCAAGGCTTGGCTTGCGCAAGTGTGTGTTGAATATTATTATGATTA TTTTTGGTATTACTTCATATTGATATTCTAAACATTAGGATGCATAATGAGGTTTAATATACAGAAGATTTTAGAACTGATTTTAATTTGTAATTGAAGCATGTTCCTTGCATGCTGTTCATTATGATTTAATGCCTATCGAGCTCTAATGGAAGTACATTATGTTTTTGATCTATTTTTTATGTTATTTTTATAAACACATCAATGAAAGGAGAAAGCATTTCTACCATACTTGTCGGATGTGTGATGATTTTCGTGATCTTCAAAAAAAATTATGAGGCGTAATTGATAACATGCAGAAAACAATTGCTAAAGGGAGAACTTTTTCGTCACCGCAAATGCTGGGAGAAGAAAGGTTGTTAAGGTCGTGGTGTGGAGCATAGGAACAGTGGAAGAAGTAGCA                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CNS09ACE             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TACTTGTCGGATGTTTAATGATTTTCGTGATCTTCAAAAAAAAATATGAGGCGTAATTGATAACATGCAGAAAACAATTGCTAAAGGGAGAACTTTTTCGTCACCGCAAATGCTGGGAGAAGAAAGGTTGTTAAGGTCGTGGTGTGGAGCATAGGAACAGTGGAGGAAGTAGCAGAAGACTAGGAATATCGGGGAGAGCAGGCTGCTGTAGTAGCCAAATAGGTGGGACCGTTTGCCGTCGTGTGGTGGAGCCGGTGTTAGATTTTAGTTGAACTGGGAGCATCCCGTGCGCAGTCCTCCCCCAAACACATCCATGCCCGTTAAAATTACGATTAAAGAACGGCAAGTAAAACCAACAAAGCAAAGCAAACAAAACAAAACAAAAAAAAAGCAAAATGCATATATACAAGCGAAGGAGAGCGGGAAGTGGAGGTACAGAAACAAACCTAAAATCAAACAAAACTATGTAAGATAGGTGTGCGTGTGTATGTGTAAAACGAATACACTTAAAAAATCGAAAAAAAAA]




>consensus_8713#0
CCGGTTTGTGTGTTTTATTGCGTTTTTCCCCCATCTATTGTCGTAAATGCCAGTTTTAGA
AGAAGGAAGAGTAGGAATTACGTAGATCTGTAGCAAGGACAGCAGAAGAAGCGTGAAACT
AAGCATGGAATCCCAATCTGCCTTACGGAAGGTGGTTTTGCATATTTGTTTTGCGAAGAA
ATGTGACCGAGAATGGAACGATATTTACGCAACAAAGCGTGAACATGTGAAGCCTGAAGC
CGAAAACAATGCACCATTCGCGTGTGTATCCTGTGCCGAATGCAACGGCTGAGCAGTGGA
TAGGACAAGCAGGACAGGAGGGGAGGTGTTCCAGCAAATATCATCCTCAAACTATCGGCA
AAACACTTCACCCGAATGGACGGAGAAGGCACACCGCCTGGTTGGTTTAGCGTAAAAGAA
CCAAAACTCACCAAATCAATCTAAAACAGAAACAGTTTAATGGTGGAACAAACGCATACA
CACTCAATAAGATCGGAGCCAGAAAAGCCAAAATGTTGAGCGGATGTTAAAGTTTGGCAA
AAGGTTAAATTGGAAGACGATAGTGAACGATGGAAGTTTGCTTTCAATATTTTATTTTGT
TCGTTTGCTTTAAACTTCGTAAGTATGAGCTACAACAGCAGTAGGACGATATGGATGGTA
GGCATCTTTTGCGGCTATTCACTTCTTATTTTATACGCAAGGCTTGGCTTGCGCAAGTGT
GTGTTGAATATTATTATGATTATTTTTGGTATTACTTCATATTGATATTCTAAACATTAG
GATGCACAATGAGGTTTAATATACAGAAGATTTTAGAACTGGTTTTAATTTGTAATTGAA
GCATGTTCCTTGCATGCTGTTCATTATGATTTAATGTCTATCGAGCTCTAATGGAAGTAC
ATTATGTTTTTGATCTATTTTTTATGTTATTTCTATAAACACATTAATGAAAGGAGAAAG
CATTTCTACCATACTTGTCGGATGTTTAATGATTTTCGTGATCTTCAAAAAAAAATATGA
GGCGTAATTGATAACATGCAGAAAACAATTGCTAAAGGGAGAACTTTTTCGTCACCGCAA
ATGCTGGGAGAAGAAAGGTTGTTAAGGTCGTGGTGTGGAGCATAGGAACAGTGGAAGAAG
TAGCAGAAGACTAGGAATATCGGGGAGAGCAGGCTGCTGTAGTAGCCAAATAGGTGGGAC
CGTTTGCCGTCGTGTGGTGGAGCCGGTGTTAGATTTTAGTTGAACTGGGAGCATCCCGTG
CGCAGTCCTCCCCCAAACACATCCATGCCCGTTAAAATTACGATTAAAGAACGGCAAGTA
AAACCAACAAAGCAAAGCAAACAAAACAAAACAAAAAAAAAGCAAAATGCATATATACAA
GCGAAGGAGAGCGGGAAGTGGAGGTACAGAAACAAACCTAAAATCAAACAAAACTATGTA
AGATAGGTGTGCGTGTGTATGTGTAAAACGAATACACTTAAAAAATCGAAAAAAAAA

consensusID : consensus_8713#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 707
fasta sequence

                              [CGCAGCGAATGGAACGGTATTTACGCAACAAAGCGTGAACATGTGAAGCTGAAGCCGAAAACAATGCACCATTCGCGTGTGTATCCTGTGCCGAATGCAACGGCTGAGCAGTGTACGGGACAAGCTTGGACCAAGCGGGGGAAGTGGTGGTTCCCAAGGCCAAAATTATTCCAATTCCCCTTCAAAACTTAATTCCGGGGCAAAAAACAAACTTTTCAACCCGGAAATTGGGGACCGGGAAAGGAAAGTGGAACAACCGGGCCTTNGGGGTTTTGGGGTTCTTAAAGCCCGGTTTANACAACACAGCGAAAACCCCCAAAAAACTTTCCCAAAGCCAAAAATTCCAAAATNCCTTTAAAAAAACCAAGCGAAAAAACCCAAAGGGTCTTCTANACTTTGGGCGTCTGTGCGAAACCAAAAAAACCTGGGCCCAATTTAACCAAACCAAATTTCCCAAAAATTCAAAGGGAATTCCCGGGGGAAAGGCCCCCAAAGCGAAAAAAAAAGCGCCCCAAAGANAATTCTTGGGTTTTGTGGGAAAGGCCCGGGGGAAACATTTTGGTCTTTAAACACAGAGGGTCTCATTGGNGGGGGCAAAAAAACAGGGGGGGTTTTTTAANAAAGCATTTTTTGGGCGGAAGACAAAAGGAAAACCGGGACATTTTAAAGGTTTTGGGANAAACCCNGGGAAATTTGGGGGGGGGAGA]

[+] EMBL AL697177             [CGCAGCGAATGGAACGGTATTTACGCAACAAAGCGTGAACATGTGAAGCTGAAGCCGAAAACAATGCACCATTCGCGTGTGTATCCTGTGCCGAATGCAACGGCTGAGCAGTGTACGGGACAAGCTTGGACCAAGCGGGGGAAGTGGTGGTTCCCAAGGCCAAAATTATTCCAATTCCCCTTCAAAACTTAATTCCGGGGCAAAAAACAAACTTTTCAACCCGGAAATTGGGGACCGGGAAAGGAAAGTGGAACAACCGGGCCTTNGGGGTTTTGGGGTTCTTAAAGCCCGGTTTANACAACACAGCGAAAACCCCCAAAAAACTTTCCCAAAGCCAAAAATTCCAAAATNCCTTTAAAAAAACCAAGCGAAAAAACCCAAAGGGTCTTCTANACTTTGGGCGTCTGTGCGAAACCAAAAAAACCTGGGCCCAATTTAACCAAACCAAATTTCCCAAAAATTCAAAGGGAATTCCCGGGGGAAAGGCCCCCAAAGCGAAAAAAAAAGCGCCCCAAAGANAATTCTTGGGTTTTGTGGGAAAGGCCCGGGGGAAACATTTTGGTCTTTAAACACAGAGGGTCTCATTGGNGGGGGCAAAAAAACAGGGGGGGTTTTTTAANAAAGCATTTTTTGGGCGGAAGACAAAAGGAAAACCGGGACATTTTAAAGGTTTTGGGANAAACCCNGGGAAATTTGGGGGGGGGAGA]




>consensus_8713#1
CGCAGCGAATGGAACGGTATTTACGCAACAAAGCGTGAACATGTGAAGCTGAAGCCGAAA
ACAATGCACCATTCGCGTGTGTATCCTGTGCCGAATGCAACGGCTGAGCAGTGTACGGGA
CAAGCTTGGACCAAGCGGGGGAAGTGGTGGTTCCCAAGGCCAAAATTATTCCAATTCCCC
TTCAAAACTTAATTCCGGGGCAAAAAACAAACTTTTCAACCCGGAAATTGGGGACCGGGA
AAGGAAAGTGGAACAACCGGGCCTTNGGGGTTTTGGGGTTCTTAAAGCCCGGTTTANACA
ACACAGCGAAAACCCCCAAAAAACTTTCCCAAAGCCAAAAATTCCAAAATNCCTTTAAAA
AAACCAAGCGAAAAAACCCAAAGGGTCTTCTANACTTTGGGCGTCTGTGCGAAACCAAAA
AAACCTGGGCCCAATTTAACCAAACCAAATTTCCCAAAAATTCAAAGGGAATTCCCGGGG
GAAAGGCCCCCAAAGCGAAAAAAAAAGCGCCCCAAAGANAATTCTTGGGTTTTGTGGGAA
AGGCCCGGGGGAAACATTTTGGTCTTTAAACACAGAGGGTCTCATTGGNGGGGGCAAAAA
AACAGGGGGGGTTTTTTAANAAAGCATTTTTTGGGCGGAAGACAAAAGGAAAACCGGGAC
ATTTTAAAGGTTTTGGGANAAACCCNGGGAAATTTGGGGGGGGGAGA

consensusID : consensus_8713#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 596
fasta sequence

                              [NNTCAATCTAAAACAGAAACAGTTTAATGGTGGAACAAACGCATACACACTCAATAAGATCGGAGCCAGAAAAGCCAAAATGTGGAGCGGATGTTAAAGTTTGGCAAAAGGTTAAATTGGAAGACGATAGTGAACGATGGAAGTTTGCTTTCAATATTTTATTTTGTTCGTTTGCTTTAAGCTTCGTAAGTATGAGCTACAACAGTAGTAGGACGATATGGATGGTAGGCATCTTTTGCGGCTATTCACTTCTTGTTTTATACGCAAGGCTTGGCTTGCGCAAGTTTGTGTGGAATATTATTATGATTATTTTTGGTATTACTTCATATTGATATTCTAAACATTAGGATGCATAATGAGAGTTAATATACAGAAGATTTTAGAACTGATTTTAATTTGTAATTGAAGCATGTNCCCTTGCCATGCTGTTCATTATGATTTAATGCCTATCGAGCTCTAATGGAAGTACATTATGTNCCNNGATCCATCCCCCATGTCATCCCCATCCNCACATCACTGACCNGAGAAAGCATTTCTACCATACTTGTCGGATGTNGGATGATTTCCGTGATCTTAAAAAAAAAATATGAGGCGTA]

[+] EMBL BX619845             [NNTCAATCTAAAACAGAAACAGTTTAATGGTGGAACAAACGCATACACACTCAATAAGATCGGAGCCAGAAAAGCCAAAATGTGGAGCGGATGTTAAAGTTTGGCAAAAGGTTAAATTGGAAGACGATAGTGAACGATGGAAGTTTGCTTTCAATATTTTATTTTGTTCGTTTGCTTTAAGCTTCGTAAGTATGAGCTACAACAGTAGTAGGACGATATGGATGGTAGGCATCTTTTGCGGCTATTCACTTCTTGTTTTATACGCAAGGCTTGGCTTGCGCAAGTTTGTGTGGAATATTATTATGATTATTTTTGGTATTACTTCATATTGATATTCTAAACATTAGGATGCATAATGAGAGTTAATATACAGAAGATTTTAGAACTGATTTTAATTTGTAATTGAAGCATGTNCCCTTGCCATGCTGTTCATTATGATTTAATGCCTATCGAGCTCTAATGGAAGTACATTATGTNCCNNGATCCATCCCCCATGTCATCCCCATCCNCACATCACTGACCNGAGAAAGCATTTCTACCATACTTGTCGGATGTNGGATGATTTCCGTGATCTTAAAAAAAAAATATGAGGCGTA]




>consensus_8713#2
NNTCAATCTAAAACAGAAACAGTTTAATGGTGGAACAAACGCATACACACTCAATAAGAT
CGGAGCCAGAAAAGCCAAAATGTGGAGCGGATGTTAAAGTTTGGCAAAAGGTTAAATTGG
AAGACGATAGTGAACGATGGAAGTTTGCTTTCAATATTTTATTTTGTTCGTTTGCTTTAA
GCTTCGTAAGTATGAGCTACAACAGTAGTAGGACGATATGGATGGTAGGCATCTTTTGCG
GCTATTCACTTCTTGTTTTATACGCAAGGCTTGGCTTGCGCAAGTTTGTGTGGAATATTA
TTATGATTATTTTTGGTATTACTTCATATTGATATTCTAAACATTAGGATGCATAATGAG
AGTTAATATACAGAAGATTTTAGAACTGATTTTAATTTGTAATTGAAGCATGTNCCCTTG
CCATGCTGTTCATTATGATTTAATGCCTATCGAGCTCTAATGGAAGTACATTATGTNCCN
NGATCCATCCCCCATGTCATCCCCATCCNCACATCACTGACCNGAGAAAGCATTTCTACC
ATACTTGTCGGATGTNGGATGATTTCCGTGATCTTAAAAAAAAAATATGAGGCGTA

consensusID : consensus_8713#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 304
fasta sequence

                              [CTGGATGAGCTACAACAGCAGTAGGACGATATGGATGGTAGGCATCTTTTGCGGCTATTCACTTCTTATTTTATACGCAAGGCTTGGCTTGCGCAAGTGTGTGTTGAATATTATTATGCATTATTTTTGGTATTACTTCACATTGATATTCTAAACATTAGGATGCACAATGAGGTTTAATATACAGAAGATTTTAGAACTGGTTTTAATTTGTAATTGAAGCATGTTCCTTGCATGCTCCTTGCATGCTGTTCATTATGATTTAATGTCTATCGAGCTCTAATGGAAGTACATTATGTTTTTG]

[+] EMBL CNS09ACD             [CTGGATGAGCTACAACAGCAGTAGGACGATATGGATGGTAGGCATCTTTTGCGGCTATTCACTTCTTATTTTATACGCAAGGCTTGGCTTGCGCAAGTGTGTGTTGAATATTATTATGCATTATTTTTGGTATTACTTCACATTGATATTCTAAACATTAGGATGCACAATGAGGTTTAATATACAGAAGATTTTAGAACTGGTTTTAATTTGTAATTGAAGCATGTTCCTTGCATGCTCCTTGCATGCTGTTCATTATGATTTAATGTCTATCGAGCTCTAATGGAAGTACATTATGTTTTTG]




>consensus_8713#3
CTGGATGAGCTACAACAGCAGTAGGACGATATGGATGGTAGGCATCTTTTGCGGCTATTC
ACTTCTTATTTTATACGCAAGGCTTGGCTTGCGCAAGTGTGTGTTGAATATTATTATGCA
TTATTTTTGGTATTACTTCACATTGATATTCTAAACATTAGGATGCACAATGAGGTTTAA
TATACAGAAGATTTTAGAACTGGTTTTAATTTGTAATTGAAGCATGTTCCTTGCATGCTC
CTTGCATGCTGTTCATTATGATTTAATGTCTATCGAGCTCTAATGGAAGTACATTATGTT
TTTG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8713#2      ------------------------------------------------------------
consensus_8713#3      ------------------------------------------------------------
consensus_8713#0      CCGGTTTGTGTGTTTTATTGCGTTTTTCCCCCATCTATTGTCGTAAATGCCAGTTTTAGA 60
consensus_8713#1      ------------------------------------------------------------
                                                                                  

consensus_8713#2      ------------------------------------------------------------
consensus_8713#3      ------------------------------------------------------------
consensus_8713#0      AGAAGGAAGAGTAGGAATTACGTAGATCTGTAGCAAGGACAGCAGAAGAAGCGTGAAACT 120
consensus_8713#1      ------------------------------------------------------------
                                                                                  

consensus_8713#2      ------------------------------------------------------------
consensus_8713#3      ------------------------------------------------------------
consensus_8713#0      AAGCATGGAATCCCAATCTGCCTTACGGAAGGTGGTTTTGCATATTTGTTTTGCGAAGAA 180
consensus_8713#1      ------------------------------------------------------------
                                                                                  

consensus_8713#2      ------------------------------------------------------------
consensus_8713#3      ------------------------------------------------------------
consensus_8713#0      ATGTGACCGAGAATGGAACGATATTTACGCAACAAAGCGTGAACATGTGAAGCCTGAAGC 240
consensus_8713#1      ----CGCAGCGAATGGAACGGTATTTACGCAACAAAGCGTGAACATGTGAAGC-TGAAGC 55
                                                                                  

consensus_8713#2      ------------------------------------------------------------
consensus_8713#3      ------------------------------------------------------------
consensus_8713#0      CGAAAACAATGCACCATTCGCGTGTGTATCCTGTGCCGAATGCAACGGCTGAGCAGTGGA 300
consensus_8713#1      CGAAAACAATGCACCATTCGCGTGTGTATCCTGTGCCGAATGCAACGGCTGAGCAGTGTA 115
                                                                                  

consensus_8713#2      ------------------------------------------------------------
consensus_8713#3      ------------------------------------------------------------
consensus_8713#0      TAGGACAAGCAGGACAGGAGGGGAGGTGTTCCAGCAAATATCATCCTCAAACTATCGGCA 360
consensus_8713#1      CGGGACAAGCTTGGACCAAGCGGGGGAAGT--GGTGGTTCCCAAGGCCAAA--ATTATTC 171
                                                                                  

consensus_8713#2      ------------------------------------------------------------
consensus_8713#3      ------------------------------------------------------------
consensus_8713#0      AAACACTTCACCCGAATGGACGGAGAAGGCACACCGCCTGGTTGGTTTAGCGTAAAAGAA 420
consensus_8713#1      CAATTCCCCTTCAAAACTTAATTCCGGGGCAAAAAACAAACTT--TTCAACCCGGA--AA 227
                                                                                  

consensus_8713#2      -------------NNTCAATCTAAAACAGAAACAGTTTAATGGTGGAACAAACGCATACA 47
consensus_8713#3      ------------------------------------------------------------
consensus_8713#0      CCAAAACTCACCAAATCAATCTAAAACAGAAACAGTTTAATGGTGGAACAAACGCATACA 480
consensus_8713#1      TTGGGGACCGGGAAAGGAAAGTGGAACAACCGGGCCTTNGGGGTTTTGGGGTTCTTAAAG 287
                                                                                  

consensus_8713#2      CACTCAATAAG-ATCGGAGCCAGAAAAGCCAAAATGTGGAGCGGATGTTAAAGTTTGGCA 106
consensus_8713#3      ------------------------------------------------------------
consensus_8713#0      CACTCAATAAG-ATCGGAGCCAGAAAAGCCAAAATGTTGAGCGGATGTTAAAGTTTGGCA 539
consensus_8713#1      CCCGGTTTANACAACACAGCGAAAACCCCCAAAAAACTTTCCCAAAGCCAAAAATTCCAA 347
                                                                                  

consensus_8713#2      AAAGGTTAAATTGGAAGACGATAGTGAACGATGGAAGTTTGCTTTCAATATTTTATTTTG 166
consensus_8713#3      ------------------------------------------------------------
consensus_8713#0      AAAGGTTAAATTGGAAGACGATAGTGAACGATGGAAGTTTGCTTTCAATATTTTATTTTG 599
consensus_8713#1      AATNCCT---TTAAAAAAACCAAGCGAAAAAACCCAAAGGGTCTTCTANAC-----TTTG 399
                                                                                  

consensus_8713#2      TTCGTTTGCTTTAAGCTTCGTAAGTATGAGCTACAACAGTAGTAGGACGATATGGATGGT 226
consensus_8713#3      ---------------------CTGGATGAGCTACAACAGCAGTAGGACGATATGGATGGT 39
consensus_8713#0      TTCGTTTGCTTTAAACTTCGTAAGTATGAGCTACAACAGCAGTAGGACGATATGGATGGT 659
consensus_8713#1      GGCGTCTGTGCGAAACCAAAAAAACCTGGGCC-CAATT-TAACCAAACCAAATTTCCCAA 457
                                                ** **  ***    *     ** * **       

consensus_8713#2      AGGCATCTTTTGCGGCTATTCACTTCTTGTTTTATACGCAAGGCTTGGCTTGCGCAAGTT 286
consensus_8713#3      AGGCATCTTTTGCGGCTATTCACTTCTTATTTTATACGCAAGGCTTGGCTTGCGCAAGTG 99
consensus_8713#0      AGGCATCTTTTGCGGCTATTCACTTCTTATTTTATACGCAAGGCTTGGCTTGCGCAAGTG 719
consensus_8713#1      AAA----TTCAAAGGGAATTC-CCGGGGGAAAGGCCCCCAAAGCGAAA-----AAAAAAG 507
                      *      **    **  **** *             * *** **           **   

consensus_8713#2      TGTGTGGAATATTATTATG-ATTATTTTTGGTATTACTTCATATTGATATTCTAAACATT 345
consensus_8713#3      TGTGTTGAATATTATTATGCATTATTTTTGGTATTACTTCACATTGATATTCTAAACATT 159
consensus_8713#0      TGTGTTGAATATTATTATG-ATTATTTTTGGTATTACTTCATATTGATATTCTAAACATT 778
consensus_8713#1      CGCCCCAAAGANAATTCTTGGGTTTTGTGGGAAAGGCCCGGGGGAAACATTTTGGTCTTT 567
                       *     ** *  *** *    * ** * ** *   *         * *** *   * **

consensus_8713#2      AGGATGCATAATGAGAGTTAATATACAGAAGATTTTAGAACTGATTTTAATTTGTAATTG 405
consensus_8713#3      AGGATGCACAATGAGGTTTAATATACAGAAGATTTTAGAACTGGTTTTAATTTGTAATTG 219
consensus_8713#0      AGGATGCACAATGAGGTTTAATATACAGAAGATTTTAGAACTGGTTTTAATTTGTAATTG 838
consensus_8713#1      AA---ACACAG-AGGGTCTCAT-TGGNGGGGGCAAAAAAACAGGGGGGGTTTTTTAAN-A 621
                      *     ** *    *   * ** *   *  *     * *** *       *** ***   

consensus_8713#2      AAGCATGTNCCCT---TGC------CATGCTGTTCATTATGATTTAATGCCTATCGAGCT 456
consensus_8713#3      AAGCATGTTCCTTGCATGCTCCTTGCATGCTGTTCATTATGATTTAATGTCTATCGAGCT 279
consensus_8713#0      AAGCATGTTCCTTG-----------CATGCTGTTCATTATGATTTAATGTCTATCGAGCT 887
consensus_8713#1      AAGCAT-TTTTTGGGCGGAAGACAAAAGGAAAACCGGGACATTTTAAAGGTTTTGGGANA 680
                      ****** *                  * *     *   *   ***** *  * * *    

consensus_8713#2      CTAATGGAAGTACATTATGTNCCNNGATCCATCCCCCATGTCATCCCCATCCNCACATCA 516
consensus_8713#3      CTAATGGAAGTACATTATGTTTTTG----------------------------------- 304
consensus_8713#0      CTAATGGAAGTACATTATGTTTTTG-ATCTATTTTTTATGTTATTTCTATAAACACATTA 946
consensus_8713#1      --AACCCNGGGAAATTTGGGGGGGGGAGA------------------------------- 707
                        **     * * ***  *                                         

consensus_8713#2      CTGACCNGAGAAAGCATTTCTACCATACTTGTCGGATGTNGGATGATTTCCGTGATCTTA 576
consensus_8713#3      ------------------------------------------------------------
consensus_8713#0      ATGAAAGGAGAAAGCATTTCTACCATACTTGTCGGATGTTTAATGATTTTCGTGATCTTC 1006
consensus_8713#1      ------------------------------------------------------------
                                                                                  

consensus_8713#2      AAAAAAAAATATGAGGCGTA---------------------------------------- 596
consensus_8713#3      ------------------------------------------------------------
consensus_8713#0      AAAAAAAAATATGAGGCGTAATTGATAACATGCAGAAAACAATTGCTAAAGGGAGAACTT 1066
consensus_8713#1      ------------------------------------------------------------
                                                                                  

consensus_8713#2      ------------------------------------------------------------
consensus_8713#3      ------------------------------------------------------------
consensus_8713#0      TTTCGTCACCGCAAATGCTGGGAGAAGAAAGGTTGTTAAGGTCGTGGTGTGGAGCATAGG 1126
consensus_8713#1      ------------------------------------------------------------
                                                                                  

consensus_8713#2      ------------------------------------------------------------
consensus_8713#3      ------------------------------------------------------------
consensus_8713#0      AACAGTGGAAGAAGTAGCAGAAGACTAGGAATATCGGGGAGAGCAGGCTGCTGTAGTAGC 1186
consensus_8713#1      ------------------------------------------------------------
                                                                                  

consensus_8713#2      ------------------------------------------------------------
consensus_8713#3      ------------------------------------------------------------
consensus_8713#0      CAAATAGGTGGGACCGTTTGCCGTCGTGTGGTGGAGCCGGTGTTAGATTTTAGTTGAACT 1246
consensus_8713#1      ------------------------------------------------------------
                                                                                  

consensus_8713#2      ------------------------------------------------------------
consensus_8713#3      ------------------------------------------------------------
consensus_8713#0      GGGAGCATCCCGTGCGCAGTCCTCCCCCAAACACATCCATGCCCGTTAAAATTACGATTA 1306
consensus_8713#1      ------------------------------------------------------------
                                                                                  

consensus_8713#2      ------------------------------------------------------------
consensus_8713#3      ------------------------------------------------------------
consensus_8713#0      AAGAACGGCAAGTAAAACCAACAAAGCAAAGCAAACAAAACAAAACAAAAAAAAAGCAAA 1366
consensus_8713#1      ------------------------------------------------------------
                                                                                  

consensus_8713#2      ------------------------------------------------------------
consensus_8713#3      ------------------------------------------------------------
consensus_8713#0      ATGCATATATACAAGCGAAGGAGAGCGGGAAGTGGAGGTACAGAAACAAACCTAAAATCA 1426
consensus_8713#1      ------------------------------------------------------------
                                                                                  

consensus_8713#2      ------------------------------------------------------------
consensus_8713#3      ------------------------------------------------------------
consensus_8713#0      AACAAAACTATGTAAGATAGGTGTGCGTGTGTATGTGTAAAACGAATACACTTAAAAAAT 1486
consensus_8713#1      ------------------------------------------------------------
                                                                                  

consensus_8713#2      -----------
consensus_8713#3      -----------
consensus_8713#0      CGAAAAAAAAA 1497
consensus_8713#1      -----------