These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8723#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 929 fasta sequence [CAAGAATCGGCACGAGGGTTCTATCAGTGACCTTGTGAGACTACGACATCTAGGAAATACTGTCCCGTGAAAATGAAGCTGTTTCCCGTGCGGCTGTCCAACATCAATAAGATGTTGGATTTTTACTCCCAATTTAATCCATCACCCCTGAGCATTAAGCAATTTATCGACTTCGGGCTTAATGCATGTCCTCGAAAGTCGTTTGTTTTCCTTCGCAAAGAGCTGCCCGTACGGTTGGCGAATATAATGAAAGAGATCACCTTGCTGCCAGAAAGTTTATTACGAATGCCTTCAGTCGGTCTGGTCAGCGCCTGGTATGTGAAAAGCTTCGAGGAAGTGCTGGCATTCGAAAAAACGGATCCTACCGAAAACAATCTAGAGAAATTCTGCAAATCGCTCACCCAGATTCGTGACCG-CCACTCCGATGTTGTGCAAACAATGGCTCAAGGGATACTGGAATTGAAGGAAAGCCGAGATGGAGCGATTGAGCCATCCACTGAGCTCTCGATTCAGTACTTTCTGGATCGTTTGTACATGTCCCGTATCAGTATAAGAATGCTCATCAATCAGCACACTATACTGTTT-GGTGATATACCG-AGACAGGACGCCATATCGGTAGCATAGATCCTCTATGTGATCCGCACATGGGTCCGTACGGGATGCTTACGAAAATGCACGTGTGTCTATGTGATCAANATTATCTTGCAAGTCCAGAAACTCGAAGTTAACTAGAAGCATAATGGCAGGCATTTGATAAGGGGAAAACCCCCATTAAAAACTGGGTGTATGTTAGCCAATCCGCAATCCTGGTTTCNCACCATGGCGNGGTTCTCGCAGGCTATATTGCGAGGACACNCCAAGNTGCGTNGGCCTTCGTAATNGGAGCCTTCACTGGGAACCAGGANAACAGGGATTGTTGGGCCTCCCAG] [+] EMBL BX467330 [CAAGAATCGGCACGAGGGTTCTATCAGTGACCTTGTGAGACTACGACATCTAGGAAATACTGTCCCGTGAAAATGAAGCTGTTTCCCGTGCGGCTGTCCAACATCAATAAGATGTTGGATTTTTACTCCCAATTTAATCCATCACCCCTGAGCATTAAGCAATTTATCGACTTCGGGCTTAATGCATGTCCTCGAAAGTCGTTTGTTTTCCTTCGCAAAGAGCTGCCCGTACGGTTGGCGAATATAATGAAAGAGATCACCTTGCTGCCAGAAAGTTTATTACGAATGCCTTCAGTCGGTCTGGTCAGCGCCTGGTATGTGAAAAGCTTCGAGGAAGTGCTGGCATTCGAAAAAACGGATCCTACCGAAAACAATCTAGAGAAATTCTGCAAATCGCTCACCCAGATTCGTGACCG CCACTCCGATGTTGTGCAAACAATGGCTCAAGGGATACTGGAATTGAAGGAAAGCCGAGATGGAGCGATTGAGCCATCCACTGAGCTCTCGATTCAGTACTTTCTGGATCGTTTGTACATGTCCCGTATCAGTATAAGAATGCTCATCAATCAGCACACTATACTGTTT GGTGATATACCG AGACAGGACGCCATATCGGTAGCATAGATCCTCTATGTGATCCGCACATGGGTCCGTACGGGATGCTTACGAAAATGCACGTGTGTCTATGTGATCAANATTATCTTGCAAGTCCAGAAACTCGAAGTTAACTAGAAGCATAATGGCAGGCATTTGATAAGGGGAAAACCCCCATTAAAAACTGGGTGTATGTTAGCCAATCCGCAATCCTGGTTTCNCACCATGGCGNGGTTCTCGCAGGCTATATTGCGAGGACACNCCAAGNTGCGTNGGCCTTCGTAATNGGAGCCTTCACTGGGAACCAGGANAACAGGGATTGTTGGGCCTCCCAG] [+] EMBL BX619099 [ angGTGAAATTGAAGCTGTTTCCCGTGCGGCTGTCCAACATCAATAAGATGTTGGATTTTTACTCCCAATTTAATCCATCACCCCTGAGCATTAAGCAATTTATCGACTTCGGGCTTAATGCATGTCCTCGAAAGTCGTTTGTTTTCCTTCGCAAAGAGCTGCCCGTACGGTTGGCGAATATAATGAAAGAGATCACCTTGCTGCCAGAAAGTTTATTACGAATGCCTTCAGTCGGTCTGGTCAGCGCCTGGTATGTGAAAAGCTTCGAGGAAGTGCTGGCATTCGAAAAAACGGATCCTACCGAAAACAATCTAGAGAAATTCTGCAAATCGCTCACCCAGATTCGTGACCGCCCACTCCGATGTTGTGCAAACAATGGCTCAAGGGATACTGGAATTGANGGAAAGCCGAGATGGAGCGATTGAGCCATCCACTGAGCTCTCGATTCAGTACTNNCTGGATCGTTTGTACATGTCCCGTATCAGTATAAGAATGCTCATCAATCAGCACACTATACTGTTTGGGTGATATACCGCAGACNGGACGCCATATCNGNAGCATAGATCCTCTATGTGATCCGCACAT GGT CNTACCGGATGCTTACGAAAATGCACGT TNTCTATG ] consensusID : consensus_8723#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 864 fasta sequence [CCGAAATCAGTAAACATTGAATCAGTTACCACAATATCGAAAGAAAAATAAATACATATCGAGCAGTGCATCAGCAATTATCAGTACGCACAGTGACAAGTTAACACCTCGCATAAAGCGGTGTGTGTTACCCAAAGTGGCACTCGTTTTCGAAAAGAAGTGAAAAACTCCCAACGCGGAACCTTCTCTACTTGTACCGCAACAACTCTTGACTAGATCTAGAGACTAGATGAGTTCGTCTGGTGACTGTGTTCTATCAGTGACCTTGTGAGACTACGACATCTAGGAAATACTGTCCCGTGAAAATGAAGCTGTTTCCCGTGCGGCTGTCCAACATCAATAAGATGTTGGATTTTTACTCCCAATTTAATCCATCACCCCTGAGCATTAAGCAATTTATCGACTTCGGGCTTAATGCATGTCCTCGAAAGTCGTTTGTTTTCCTTCGCAAAGAGCTGCCCGTGCGGTTGGCGAATATAATGAAAGAGATCACCTTGCTGCCAGAAAGTTTATTACGAATGCCTTCAGTCGGTCTGGTCAGCGCCTGGTATGTGAAAAGCTTCGAGGAAGTGCTGGCATTCGAAAAAACGGATCCTACCGAAAACAATCTAGAGAAATTCTGCAAATCGCTCACCCAGATTCGTGACCGCCACTCCGATGTTGTGCAAACAATGGCTCAAGGGATACTGGAATTGAAGGAAAGCCGAGATGGAGCGATTGAGCCATCCACTGAGCTCTCGATTCAGTACTTTCTGGATCGTTTGTACATGTCCCGTATCAGTATAAGAATGCTCATCAATCAGCACACTATACTGTTTGGTGATATACCGCAGACAGGACGCCATATCGGTAGCATAGATCCTC] [+] EMBL BM584155 [CCGAAATCAGTAAACATTGAATCAGTTACCACAATATCGAAAGAAAAATAAATACATATCGAGCAGTGCATCAGCAATTATCAGTACGCACAGTGACAAGTTAACACCTCGCATAAAGCGGTGTGTGTTACCCAAAGTGGCACTCGTTTTCGAAAAGAAGTGAAAAACTCCCAACGCGGAACCTTCTCTACTTGTACCGCAACAACTCTTGACTAGATCTAGAGACTAGATGAGTTCGTCTGGTGACTGTGTTCTATCAGTGACCTTGTGAGACTACGACATCTAGGAAATACTGTCCCGTGAAAATGAAGCTGTTTCCCGTGCGGCTGTCCAACATCAATAAGATGTTGGATTTTTACTCCCAATTTAATCCATCACCCCTGAGCATTAAGCAATTTATCGACTTCGGGCTTAATGCATGTCCTCGAAAGTCGTTTGTTTTCCTTCGCAAAGAGCTGCCCGTGCGGTTGGCGAATATAATGAAAGAGATCACCTTGCTGCCAGAAAGTTTATTACGAATGCCTTCAGTCGGTCTGGTCAGCGCCTGGTATGTGAAAAGCTTCGAGGAAGTGCTGGCATTCGAAAAAACGGATCCTACCGAAAACAATCTAGAGAAATTCTGCAAATCGCTCACCCAGATTCGTGACCGCCACTCCGATGTTGTGCAAACAATGGCTCAAGGGATACTGGAATTGAAGGAAAGCCGAGATGGAG ] [+] EMBL BM652737 [ ccgCCCAAAGTGGCACTCGTTTTCGAAAAGAAGTGAAAAACTCCCAACGCGGAACCTTCTCTACTTGTACCGCAACAACTCTTGACTAGATCTAGAGACTAGATGAGTTCGTCTGGTGACTGTGTTCTATCAGTGACCTTGTGAGACTACGACATCTAGGAAATACTGTCCCGTGAAAATGAAGCTGTTTCCCGTGCGGCTGTCCAACATCAATAAGATGTTGGATTTTTACTCCCAATTTAATCCATCACCCCTGAGCATTAAGCAATTTATCGACTTCGGGCTTAATGCATGTCCTCGAAAGTCGTTTGTTTTCCTTCGCAAAGAGCTGCCCGTGCGGTTGGCGAATATAATGAAAGAGATCACCTTGCTGCCAGAAAGTTTATTACGAATGCCTTCAGTCGGTCTGGTCAGCGCCTGGTATGTGAAAAGCTTCGAGGAAGTGCTGGCATTCGAAAAAACGGATCCTACCGAAAACAATCTAGAGAAATTCTGCAAATCGCTCACCCAGATTCGTGACCGCCACTCCGATGTTGTGCAAACAATGGCTCAAGGGATACTGGAATTGAAGGAAAGCCGAGATGGAGCGATTGAGCCATCCACTGAGCTCTCGATTCAGTACTTTCTGGATCGTTTG ] [+] EMBL BM646272 [ ccgAAAACTCCCAACGCGGAACCTTCTCCACTTGTACCGCAACAACTCTTGACTAGATCTAGAGACTAGATGAGTTCGTCTGGTGACTGTGTTCTATCAGTGACCTTGTGAGACTACGACATCTAGGAAATACTGTCCCGTGAAAATGAAGCTGTTTCCCGTGCGGCTGTCCAACATCAATAAGATGTTGGATTTTTACTCCCAATTTAATCCATCACCCCTGAGCATTAAGCAATTTATCGACTTCGGGCTTAATGCATGTCCTCGAAAGTCGTTTGTTTTCCTTCGCAAAGAGCTGCCCGTACGGTTGGCGAATATAATGAAAGAGATCACCTTGCTGCCAGAAAGTTTATTACGAATGCCTTCAGTCGGTCTGGTCAGCGCCTGGTATGTGAAAAGCTTCGAGGAAGTGCTGGCATTCGAAAAAACGGATCCTACCGAAAACAATCTAGAGAAATTCTGCAAATCGCTCACCCAGATTCGTGACCGCCACTCCGATGTTGTGCAAACAATGGCTCAAGGGATACTGGAATTGAAGGAAAGCCGAGATGGAGCGATTGAGCCATCCACTGAGCTCTCGATTCAGTACTTTCTGGATCGTTTGTACATGTCCCGTATCAGTATAAGAATGCTCATCAATCAGCACACTATACTGTTTGGTGATATACCGCAGACAGGACGCCATATCGGTAGCATAGATCCTC] consensusID : consensus_8723#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 695 fasta sequence [CCGCGGACGCGTGGGACATATCGAGCAGTGCATCAGCAATTATCAGTACGCACAGTGACAAGTTAACACCTCGCATAAAGCGGTGTGTGTTACCCAAAGTGGCACTCGTTTTCGAAAAGAAGTGAAAAACTCCCAACGCGGAACCTTCTCCACTTGTACCGCAACAACTCTTGACTAGATCTAGAGACTAGATGAGTTCGTCTGGTGACTGTGTTCTATCAGTGACCTTGTGAGACTACGACATCTAGGAAATACTGTCCCGTGAAAATGAAGCTGTTTCCCGTGCGGCTGTCCAACATCAATAAGATGTTGGATTTTTACTCCCAATTTAATCCATCACCCCTGAGCATTAAGCAATTTATCGACTTCGGGCTTAATGCATGTCCTCGAAAGTCGTTTGTTTTCCTTCGCAAAGAGCTGCCCGTACGGTTGGCGAATATAATGAAAGAGATCACCTTGCTGCCAGAAAGTTTATTACGAATGCCTTCAGTCGGTCTGGTCAGCGCCTGGTATGTGAAAAGCTTCGAGGAAGTGCTGGCATTCGAAAAAACGGATCCTACCGAAAACAATCTAGAGAAATTCTGCAAATCGCTCACCCAGATTCGTGACCGCCACTCCGATGTTGTGCAAACAATGGCTCAAGGGATACTGGAATTGAAGGAAAGCCGAGATGGAGCGATTGAGCCATCCACTGA] [+] EMBL BM631799 [CCGCGGACGCGTGGGACATATCGAGCAGTGCATCAGCAATTATCAGTACGCACAGTGACAAGTTAACACCTCGCATAAAGCGGTGTGTGTTACCCAAAGTGGCACTCGTTTTCGAAAAGAAGTGAAAAACTCCCAACGCGGAACCTTCTCCACTTGTACCGCAACAACTCTTGACTAGATCTAGAGACTAGATGAGTTCGTCTGGTGACTGTGTTCTATCAGTGACCTTGTGAGACTACGACATCTAGGAAATACTGTCCCGTGAAAATGAAGCTGTTTCCCGTGCGGCTGTCCAACATCAATAAGATGTTGGATTTTTACTCCCAATTTAATCCATCACCCCTGAGCATTAAGCAATTTATCGACTTCGGGCTTAATGCATGTCCTCGAAAGTCGTTTGTTTTCCTTCGCAAAGAGCTGCCCGTACGGTTGGCGAATATAATGAAAGAGATCACCTTGCTGCCAGAAAGTTTATTACGAATGCCTTCAGTCGGTCTGGTCAGCGCCTGGTATGTGAAAAGCTTCGAGGAAGTGCTGGCATTCGAAAAAACGGATCCTACCGAAAACAATCTAGAGAAATTCTGCAAATCGCTCACCCAGATTCGTGACCGCCACTCCGATGTTGTGCAAACAATGGCTCAAGGGATACTGGAATTGAAGGAAAGCCGAGATGGAGCGATTGAGCCATCCACTGA] [+] EMBL BM616527 [ ccgAGTGCATCAGCAATTATCAGTACGCACAGTGACAAGTTAACACCTCGCATAAAGCGGTGTGTGTTACCCAAAGTGGCACTCGTTTTCGAAAAGAAGTGAAAAACTCCCAACGCGGAACCTTCTCCACTTGTACCGCAACAACTCTTGACTAGATCTAGAGACTAGATGAGTTCGTCTGGTGACTGTGTTCTATCAGTGACCTTGTGAGACTACGACATCTAGGAAATACTGTCCCGTGAAAATGAAGCTGTTTCCCGTGCGGCTGTCCAACATCAATAAGATGTTGGATTTTTACTCCCAATTTAATCCATCACCCCTGAGCATTAAGCAATTTATCGACTTCGGGCTTAATGCATGTCCTCGAAAGTCGTTTGTTTTCCTTCGCAAAGAGCTGCCCGTACGGTTGGCGAATATAATGAAAGAGATCACCTTGCTGCCAGAAAGTTTATTACGAATGCCTTCAGTCGGTCTGGTCAGCGCCTGGTATGTGAAAAGCTTCGAGGAAGTGCTGGCATTCGAAAAAACGGATCCTACCGAAAACAATCTAGAGAAATTCTGCAAATCGCTCACCCAGATTCGTGACCGCCACTCCGATGTTGTGCAAACAATGGCTCAAGGGATACTGGAATTGAAGGAAAGCCGAGATGGAGCGATTG ] [+] EMBL BX606616 [ ACAAGTTAACACCTCGCATAAAGCGGTGTGTGTTACCCAAAGTGGCACTCGTTTTCGAAAAGAAGTGAAAAACTCCCAACGCGGAACCTTCTCCACTTGTACCGCAACAACTCTTGACTAGATCTAGAGACTAGATGAGTTCGTCTGGTGACTGTGTTCTATCAGTGACCTTGTGAGACTACGACATCTAGGAAATACTGTCCCGTGAAAATGAAGCTGTTTCCCGTGCGGCTGTCCAACATCAATAAGATGTTGGATTTTTACTCCCAATTTAATCCATCACCCCTGAGCATTAAGCAATTTATCGACTTCGGGCTTAATGCATGTCCTCGAAAGTCGTTTGTTTTCCTTCGCAAAGAGCTGCCCGTGCGGTTGGCGAATATAATGAAAGAGATCACCTTGCTGCCAGAAAGTTTATTACGAATGCCTTCAGTCGGTCTGGTCAGCGCCTGGTATGTGAAAAGCTTCGAGGAAGTGCTGGCATTCGAAAAAACGGATCCTACCGAAAACAATCTAGAGAAATTCTGCAAATCGCTCACCCAGATTCGTGACCGCCACTCCGATGTTGTGCAAACAATGGCT ] consensusID : consensus_8723#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 637 fasta sequence [AATCACCCAGGTTAACCAGAAAGTTATTACGAATGNCTTCATCNGTCTGGTCAGCGCCTGGTATGTGANANAGCTTCNAGGAAGTGCTGGGCTTCGAAAAANGGATCCTACCGNAAAGACAANCTAGAGAAATTTCTGGAATATCGCTCACCCAGATTCGTGACCGCCACTCCGATGTTGTGCAAACAATGGCTCAAGGGATACTGGAACTTGAAGGAAAGCCGAGATGGAGCGATTGAGCCATCCACATGAGCTCTCGATTCAGGTACTTANCTNGGATCGTAATGTACATGTCCCGTATCAGTATAACGAATGCTCATCAATCAGCACACTATACTGTGCNGGTTGATATACCGTCAGACAGGACGCGATATNCGGGCAGCATAGATCCTCTATGTGATNCCAGGACCTGGTACGAACGGGATGCTNNCCGAAACATGGACGTNCCGGACTGTGAGTACAATATATATCTNTGCAAGTTACCATGAAACTACGCAATCTAANTTAGACGCCATAAACTGCACGCATCGANAACAGGGGAAAAGCNCACNANACACAATCGCTGTTAATNGTAACCANCGGNTCATGGTATCCACCATTGCTGGATCGGAGNGTCATTTCAAGANAACACCACAGT] [+] EMBL AL932220 [AATCACCCAGGTTAACCAGAAAGTTATTACGAATGNCTTCATCNGTCTGGTCAGCGCCTGGTATGTGANANAGCTTCNAGGAAGTGCTGGGCTTCGAAAAANGGATCCTACCGNAAAGACAANCTAGAGAAATTTCTGGAATATCGCTCACCCAGATTCGTGACCGCCACTCCGATGTTGTGCAAACAATGGCTCAAGGGATACTGGAACTTGAAGGAAAGCCGAGATGGAGCGATTGAGCCATCCACATGAGCTCTCGATTCAGGTACTTANCTNGGATCGTAATGTACATGTCCCGTATCAGTATAACGAATGCTCATCAATCAGCACACTATACTGTGCNGGTTGATATACCGTCAGACAGGACGCGATATNCGGGCAGCATAGATCCTCTATGTGATNCCAGGACCTGGTACGAACGGGATGCTNNCCGAAACATGGACGTNCCGGACTGTGAGTACAATATATATCTNTGCAAGTTACCATGAAACTACGCAATCTAANTTAGACGCCATAAACTGCACGCATCGANAACAGGGGAAAAGCNCACNANACACAATCGCTGTTAATNGTAACCANCGGNTCATGGTATCCACCATTGCTGGATCGGAGNGTCATTTCAAGANAACACCACAGT] consensusID : consensus_8723#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 625 fasta sequence [CCGCCCACGCGTCCGGCTGTTTCCCGTGCGGCTGTCCAACATCAATAAGATGTTGGATTTTTACTCCCAATTTAATCCATCACCCCTGAGCATTAAGCAATTTATCGACTTCGGGCTTAATGCATGTCCTCGAAAGTCGTTTGTTTTCCTTCGCAAAGAGCTGCCCGTACGGTTGGCGAATATAATGAAAGAGATCACCTTGCTGCCAGAAAGTTTATTACGAATGCCTTCAGTCGGTCTGGTCAGCGCCTGGTATGTGAAAAGCTTCGAGGAAGTGCTGGCATTCGAAAAAACGGATCCTACCGAAAACAATCTAGAGAAATTCTGCAAATCGCTCACCCAGATTCGTGACCGCCACTCCGATGTTGTGCAAACAATGGCTCAAGGGATACTGGAATTGAAGGAAAGCCGAGATGGAGCGATTGAGCCATCCACTGAGCTCTCGATTCAGTACTTTCTGGATCGTTTGTACATGTCCCGTATCAGTATAAGAATGCTCATCAATCAGCACACTATACTGTTTGGTGATATACCGCAGACAGGACGCCATATCGGTAGCATAGATCCTCTATGTGATCCGCACATGGTCGTACGGGATGCTTACGAAAATGCACGTTTTCTATGT] [+] EMBL BM575068 [CCGCCCACGCGTCCGGCTGTTTCCCGTGCGGCTGTCCAACATCAATAAGATGTTGGATTTTTACTCCCAATTTAATCCATCACCCCTGAGCATTAAGCAATTTATCGACTTCGGGCTTAATGCATGTCCTCGAAAGTCGTTTGTTTTCCTTCGCAAAGAGCTGCCCGTACGGTTGGCGAATATAATGAAAGAGATCACCTTGCTGCCAGAAAGTTTATTACGAATGCCTTCAGTCGGTCTGGTCAGCGCCTGGTATGTGAAAAGCTTCGAGGAAGTGCTGGCATTCGAAAAAACGGATCCTACCGAAAACAATCTAGAGAAATTCTGCAAATCGCTCACCCAGATTCGTGACCGCCACTCCGATGTTGTGCAAACAATGGCTCAAGGGATACTGGAATTGAAGGAAAGCCGAGATGGAGCGATTGAGCCATCCACTGAGCTCTCGATTCAGTACTTTCTGGATCGTTTGTACATGTCCCGTATCAGTATAAGAATGCTCATCAATCAGCACACTATACTGTTTGGTGATATACCGCAGACAGGACGCCATATCGGTAGCATAGATCCTCTATGTGATCCGCACATGGTCGTACGGGATGCTTACGAAAATGCACGTTTTCTATGT] consensusID : consensus_8723#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 584 fasta sequence [CCGCGGACGCGTGGGTGCGGCTGTCCAACATCAATAAGATGTTGGATTTTTACTCCCAATTTAATCCATCACCCCTGAGCATTAAGCAATTTATCGACTTCGGGCTTAATGCATGTCCTCGAAAGTCGTTTGTTTTCCTTCGCAAAGAGCTGCCCGTACGGTTGGCGAATATAATGAAAGAGATCACCTTGCTGCCAGAAAGTTTATTACGAATGCCCTCAGTCGGTCTGGTCAGCGCCTGGTATGTGAAAAGCTTCGAGGAAGTGCTGGCATTCGAAAAAACGGATCCTACCGAAAACAATCTAGAGAAATTCTGCAAATCGCTCACCCAGATTCGTGACCGCCACTCCGATGTTGTGCAAACAATGGCTCAAGGGATACTGGAATTGAAGGAAAGCCGAGATGGAGCGATTGAGCCATCCACTGAGCTCTCGATTCAGTACTTTCTGGATCGTTTGTACATGTCCCGTATCAGTATAAGAATGCTCATCAATCAACACACTATACTGTTTGGTGATATACCACAGACAGGACGCCATATCGGTAGCATAGATCCTCTATGTGATCCGCACATGGTCGTACGG] [+] EMBL BM589788 [CCGCGGACGCGTGGGTGCGGCTGTCCAACATCAATAAGATGTTGGATTTTTACTCCCAATTTAATCCATCACCCCTGAGCATTAAGCAATTTATCGACTTCGGGCTTAATGCATGTCCTCGAAAGTCGTTTGTTTTCCTTCGCAAAGAGCTGCCCGTACGGTTGGCGAATATAATGAAAGAGATCACCTTGCTGCCAGAAAGTTTATTACGAATGCCCTCAGTCGGTCTGGTCAGCGCCTGGTATGTGAAAAGCTTCGAGGAAGTGCTGGCATTCGAAAAAACGGATCCTACCGAAAACAATCTAGAGAAATTCTGCAAATCGCTCACCCAGATTCGTGACCGCCACTCCGATGTTGTGCAAACAATGGCTCAAGGGATACTGGAATTGAAGGAAAGCCGAGATGGAGCGATTGAGCCATCCACTGAGCTCTCGATTCAGTACTTTCTGGATCGTTTGTACATGTCCCGTATCAGTATAAGAATGCTCATCAATCAACACACTATACTGTTTGGTGATATACCACAGACAGGACGCCATATCGGTAGCATAGATCCTCTATGTGATCCGCACATGGTCGTACGG] consensusID : consensus_8723#6 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 472 fasta sequence [AAATGAAGCTGTTTCCCGTGCGGCTGTCCAACATCAATAAGATGTTGGATTTTTACTCCCATTTTAATCCATCACCCCTGAGCATTAAGCAATTTATCGACTTCTGAGACGTTTGCCTTGTGTGTGTCTCTGTTGTTGTGTCTTGACCACTGAAAGTCTCTAATCGATGATTTTATGGAAACTACAATGTGTCTATAGAGATGCAAACGGCTTAATGCATGTCCTCGAAAGTCGTTTGTTTTCCTTCGCAAAGAGCTGCCCGTACGGATGGCGAATATAATGAAAGAGATCACCTTGCTGCCAGAAAGTTTATTACGAATGCCCTCAGACGGTCTGGTCAGCGCCTGGTATGTGAAAAGCTTCGAGGAAGTGCTGGCATTCGAAAAAACGGATCCTACCGAAAACAATCTAGAGAAATTCTGCAAATCGCTCACCCAGATTCGTGACCGCCACTCCGATGTTGTGCAAACCA] [+] EMBL BM618121 [AAATGAAGCTGTTTCCCGTGCGGCTGTCCAACATCAATAAGATGTTGGATTTTTACTCCCATTTTAATCCATCACCCCTGAGCATTAAGCAATTTATCGACTTCTGAGACGTTTGCCTTGTGTGTGTCTCTGTTGTTGTGTCTTGACCACTGAAAGTCTCTAATCGATGATTTTATGGAAACTACAATGTGTCTATAGAGATGCAAACGGCTTAATGCATGTCCTCGAAAGTCGTTTGTTTTCCTTCGCAAAGAGCTGCCCGTACGGATGGCGAATATAATGAAAGAGATCACCTTGCTGCCAGAAAGTTTATTACGAATGCCCTCAGACGGTCTGGTCAGCGCCTGGTATGTGAAAAGCTTCGAGGAAGTGCTGGCATTCGAAAAAACGGATCCTACCGAAAACAATCTAGAGAAATTCTGCAAATCGCTCACCCAGATTCGTGACCGCCACTCCGATGTTGTGCAAACCA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_8723#1 CCGAAATCAGTAAACATTGAATCAGTTACCACAATATCGAAAGAAAAATAAATACATATC 60 consensus_8723#2 -------------------------------------CCGCGGACGCGTGGG-ACATATC 22 consensus_8723#6 ------------------------------------------------------------ consensus_8723#5 ------------------------------------------------------------ consensus_8723#4 ------------------------------------------------------------ consensus_8723#0 ------------------------------------------------------------ consensus_8723#3 ---------------------------------------AATCACCCAGGTTAACCAGAA 21 consensus_8723#1 GAGCAGTGCATCAGCAATTATCAGTACGCACAGTGACAAGT---TAACACCTCGCATAAA 117 consensus_8723#2 GAGCAGTGCATCAGCAATTATCAGTACGCACAGTGACAAGT---TAACACCTCGCATAAA 79 consensus_8723#6 ------------------------------------------------------------ consensus_8723#5 ------------------------------------------------------------ consensus_8723#4 ------------------------------------------------------------ consensus_8723#0 ------------------------------------------------------------ consensus_8723#3 AGTTATTACGAATGNCTTCATCNGTCTGGTCAGCGCCTGGTATGTGANANAGCTTCNAGG 81 consensus_8723#1 GCGGTGTGTGTTACCCAAAGTGGCACTCGTTTTCGAAAAGAAGTGAAAAACTCCCAACGC 177 consensus_8723#2 GCGGTGTGTGTTACCCAAAGTGGCACTCGTTTTCGAAAAGAAGTGAAAAACTCCCAACGC 139 consensus_8723#6 --------------------------------------------------------AAAT 4 consensus_8723#5 ------------------------------------------------------------ consensus_8723#4 ------------------------------------------------------------ consensus_8723#0 ------------------------------------------------------------ consensus_8723#3 AAGTGCTGGGCTTCGAAAAANGGATCCTACCGNAAAGACAANCTAGAGAAATTTCTGGAA 141 consensus_8723#1 GGAACCTTCTCTACTTGTACCGCAACAACTCTTGACTAGATCTAGAGACTAGATGAGTTC 237 consensus_8723#2 GGAACCTTCTCCACTTGTACCGCAACAACTCTTGACTAGATCTAGAGACTAGATGAGTTC 199 consensus_8723#6 GAAGCTGTTTCC---CGTGCGGC---------TGTCCAACATCAATAAGATGTTGGATTT 52 consensus_8723#5 ------------------------------------------------------------ consensus_8723#4 ------------------------------------------------------------ consensus_8723#0 ---------------------------------------------------CAAGAATCG 9 consensus_8723#3 TATCGCTCACCCAGATTCGTGACCGCCACTC-CGATGTTGTGCAAACAATGGCTCAAGGG 200 consensus_8723#1 GTCTGGTGACTGTGTTCTATCAGTGACCTTGTGAGACTACGACATCTA--GGAAATACTG 295 consensus_8723#2 GTCTGGTGACTGTGTTCTATCAGTGACCTTGTGAGACTACGACATCTA--GGAAATACTG 257 consensus_8723#6 TTACTCCCATTTTAATCCATCA----CCCCTGAGCATTAAGCAATTTA--TCGACTTCTG 106 consensus_8723#5 ------------------------------------------------------------ consensus_8723#4 ------------------------------------------------------------ consensus_8723#0 GCACGAGG-----GTTCTATCAGTGACCTTGTGAGACTACGACATCTA--GGAAATACTG 62 consensus_8723#3 ATACTGGAACT-TGAAGGAAAGCCGAGATGGAGCGATTGAGCCATCCACATGAGCTCTCG 259 consensus_8723#1 TCCCGTGAAAATGAAGCTGTTTCCCGTGCGGCTGTCCAACATCAATAAGATGTTGGATTT 355 consensus_8723#2 TCCCGTGAAAATGAAGCTGTTTCCCGTGCGGCTGTCCAACATCAATAAGATGTTGGATTT 317 consensus_8723#6 AGACGTTTGCCTTGTG-TGTGTCTC-TGTTGTTGTGTCTTGACCACTGAAAGTC----TC 160 consensus_8723#5 ----------CCGCGGACGCGTGGG-TGCGGCTGTCCAACATCAATAAGATGTTGGATTT 49 consensus_8723#4 CCGCCCACGCGTCCGGCTGTTTCCCGTGCGGCTGTCCAACATCAATAAGATGTTGGATTT 60 consensus_8723#0 TCCCGTGAAAATGAAGCTGTTTCCCGTGCGGCTGTCCAACATCAATAAGATGTTGGATTT 122 consensus_8723#3 ATTCAGGTACTTANCTNGGATCGTAATGTACATGTCCCGTATCAGTATAACG-------- 311 * ** *** * * * consensus_8723#1 TTACTCCCAATTTAATCCATCACCCCTGAGCATTAAGCAATTTATCGACTTCGGGCTTAA 415 consensus_8723#2 TTACTCCCAATTTAATCCATCACCCCTGAGCATTAAGCAATTTATCGACTTCGGGCTTAA 377 consensus_8723#6 TAATCGATGATTTTATGGAA-ACTACAATGTGTCTATAGAGATGCAAAC----GGCTTAA 215 consensus_8723#5 TTACTCCCAATTTAATCCATCACCCCTGAGCATTAAGCAATTTATCGACTTCGGGCTTAA 109 consensus_8723#4 TTACTCCCAATTTAATCCATCACCCCTGAGCATTAAGCAATTTATCGACTTCGGGCTTAA 120 consensus_8723#0 TTACTCCCAATTTAATCCATCACCCCTGAGCATTAAGCAATTTATCGACTTCGGGCTTAA 182 consensus_8723#3 --AATGCTCATCAATCAGCACACTATACTGTGCNGGTTGATATACCGTC---AGACAGGA 366 * ** ** * * * * * * * consensus_8723#1 TGCATGTCCTCGAAAGTCGTTTGTTTTCCTT-CGCAAAGAGCTGCCCGTGCGGTTGGCGA 474 consensus_8723#2 TGCATGTCCTCGAAAGTCGTTTGTTTTCCTT-CGCAAAGAGCTGCCCGTACGGTTGGCGA 436 consensus_8723#6 TGCATGTCCTCGAAAGTCGTTTGTTTTCCTT-CGCAAAGAGCTGCCCGTACGGATGGCGA 274 consensus_8723#5 TGCATGTCCTCGAAAGTCGTTTGTTTTCCTT-CGCAAAGAGCTGCCCGTACGGTTGGCGA 168 consensus_8723#4 TGCATGTCCTCGAAAGTCGTTTGTTTTCCTT-CGCAAAGAGCTGCCCGTACGGTTGGCGA 179 consensus_8723#0 TGCATGTCCTCGAAAGTCGTTTGTTTTCCTT-CGCAAAGAGCTGCCCGTACGGTTGGCGA 241 consensus_8723#3 CGCG-ATATNCGGGCAGCATAGATCCTCTATGTGATNCCAGGACCTGGTACGAACGGGAT 425 ** * ** * * * ** * * ** * ** ** ** consensus_8723#1 ATATAATGAAAGAGATCACCTTGCTGCCAGAAAGTTTATTACGAATGCCTTCAGTCGGTC 534 consensus_8723#2 ATATAATGAAAGAGATCACCTTGCTGCCAGAAAGTTTATTACGAATGCCTTCAGTCGGTC 496 consensus_8723#6 ATATAATGAAAGAGATCACCTTGCTGCCAGAAAGTTTATTACGAATGCCCTCAGACGGTC 334 consensus_8723#5 ATATAATGAAAGAGATCACCTTGCTGCCAGAAAGTTTATTACGAATGCCCTCAGTCGGTC 228 consensus_8723#4 ATATAATGAAAGAGATCACCTTGCTGCCAGAAAGTTTATTACGAATGCCTTCAGTCGGTC 239 consensus_8723#0 ATATAATGAAAGAGATCACCTTGCTGCCAGAAAGTTTATTACGAATGCCTTCAGTCGGTC 301 consensus_8723#3 GCTNNCCGAAACATGG-ACGTNCCGGACTGTGAGTACAATATATATCTNTGCAAGTTACC 484 **** * ** * * * * * *** * ** ** ** * consensus_8723#1 TGGTCAGCGCCTGGTATGTGAAAAGCTTCGAGGAAGTGCTGGCATTCGAAAAAACGGAT- 593 consensus_8723#2 TGGTCAGCGCCTGGTATGTGAAAAGCTTCGAGGAAGTGCTGGCATTCGAAAAAACGGAT- 555 consensus_8723#6 TGGTCAGCGCCTGGTATGTGAAAAGCTTCGAGGAAGTGCTGGCATTCGAAAAAACGGAT- 393 consensus_8723#5 TGGTCAGCGCCTGGTATGTGAAAAGCTTCGAGGAAGTGCTGGCATTCGAAAAAACGGAT- 287 consensus_8723#4 TGGTCAGCGCCTGGTATGTGAAAAGCTTCGAGGAAGTGCTGGCATTCGAAAAAACGGAT- 298 consensus_8723#0 TGGTCAGCGCCTGGTATGTGAAAAGCTTCGAGGAAGTGCTGGCATTCGAAAAAACGGAT- 360 consensus_8723#3 ATGAAACTACGCAATCTAANTTAGACGCC-ATAAACTGCACGCATCGANAACAGGGGAAA 543 * * * * * * * * * ** *** **** ** * *** consensus_8723#1 --CCTACCGAAAACAATCTAGAGAAATTCTGCAAATCGCTCACCCAGATTCGTGACCGCC 651 consensus_8723#2 --CCTACCGAAAACAATCTAGAGAAATTCTGCAAATCGCTCACCCAGATTCGTGACCGCC 613 consensus_8723#6 --CCTACCGAAAACAATCTAGAGAAATTCTGCAAATCGCTCACCCAGATTCGTGACCGCC 451 consensus_8723#5 --CCTACCGAAAACAATCTAGAGAAATTCTGCAAATCGCTCACCCAGATTCGTGACCGCC 345 consensus_8723#4 --CCTACCGAAAACAATCTAGAGAAATTCTGCAAATCGCTCACCCAGATTCGTGACCGCC 356 consensus_8723#0 --CCTACCGAAAACAATCTAGAGAAATTCTGCAAATCGCTCACCCAGATTCGTGACCGCC 418 consensus_8723#3 AGCNCACNANACACAATCGCTGTTAATNGTAACCANCGGNTCATGGTATCCACCATTGCT 603 * ** * ****** *** * * ** ** * * ** consensus_8723#1 ACTCCGA--TGTTGTGCAAACAATGGCTCAAGGGATACTGGAATTGAAGGAAAGCCGAGA 709 consensus_8723#2 ACTCCGA--TGTTGTGCAAACAATGGCTCAAGGGATACTGGAATTGAAGGAAAGCCGAGA 671 consensus_8723#6 ACTCCGA--TGTTGTGCAAACCA------------------------------------- 472 consensus_8723#5 ACTCCGA--TGTTGTGCAAACAATGGCTCAAGGGATACTGGAATTGAAGGAAAGCCGAGA 403 consensus_8723#4 ACTCCGA--TGTTGTGCAAACAATGGCTCAAGGGATACTGGAATTGAAGGAAAGCCGAGA 414 consensus_8723#0 ACTCCGA--TGTTGTGCAAACAATGGCTCAAGGGATACTGGAATTGAAGGAAAGCCGAGA 476 consensus_8723#3 GGATCGGAGNGTCATTTCAAGANAACACCACAGT-------------------------- 637 ** ** * ** consensus_8723#1 TGGAGCGATTGAGCCATCCACTGAGCTCTCGATTCAGTACTTTCTGGATCGTTTGTACAT 769 consensus_8723#2 TGGAGCGATTGAGCCATCCACTGA------------------------------------ 695 consensus_8723#6 ------------------------------------------------------------ consensus_8723#5 TGGAGCGATTGAGCCATCCACTGAGCTCTCGATTCAGTACTTTCTGGATCGTTTGTACAT 463 consensus_8723#4 TGGAGCGATTGAGCCATCCACTGAGCTCTCGATTCAGTACTTTCTGGATCGTTTGTACAT 474 consensus_8723#0 TGGAGCGATTGAGCCATCCACTGAGCTCTCGATTCAGTACTTTCTGGATCGTTTGTACAT 536 consensus_8723#3 ------------------------------------------------------------ consensus_8723#1 GTCCCGTATCAGTATAAGAATGCTCATCAATCAGCACACTATACTGTTTGGTGATATACC 829 consensus_8723#2 ------------------------------------------------------------ consensus_8723#6 ------------------------------------------------------------ consensus_8723#5 GTCCCGTATCAGTATAAGAATGCTCATCAATCAACACACTATACTGTTTGGTGATATACC 523 consensus_8723#4 GTCCCGTATCAGTATAAGAATGCTCATCAATCAGCACACTATACTGTTTGGTGATATACC 534 consensus_8723#0 GTCCCGTATCAGTATAAGAATGCTCATCAATCAGCACACTATACTGTTTGGTGATATACC 596 consensus_8723#3 ------------------------------------------------------------ consensus_8723#1 GCAGACAGGACGCCATATCGGTAGCATAGATCCTC------------------------- 864 consensus_8723#2 ------------------------------------------------------------ consensus_8723#6 ------------------------------------------------------------ consensus_8723#5 ACAGACAGGACGCCATATCGGTAGCATAGATCCTCTATGTGATCCGCACATGGTCGTACG 583 consensus_8723#4 GCAGACAGGACGCCATATCGGTAGCATAGATCCTCTATGTGATCCGCACATGGTCGTACG 594 consensus_8723#0 G-AGACAGGACGCCATATCGGTAGCATAGATCCTCTATGTGATCCGCACATGGGTCCGTA 655 consensus_8723#3 ------------------------------------------------------------ consensus_8723#1 ------------------------------------------------------------ consensus_8723#2 ------------------------------------------------------------ consensus_8723#6 ------------------------------------------------------------ consensus_8723#5 G----------------------------------------------------------- 584 consensus_8723#4 GGATGCTTACGAAAATGCACGTTTTCTATGT----------------------------- 625 consensus_8723#0 CGGGATGCTTACGAAAATGCACGTGTGTCTATGTGATCAANATTATCTTGCAAGTCCAGA 715 consensus_8723#3 ------------------------------------------------------------ consensus_8723#1 ------------------------------------------------------------ consensus_8723#2 ------------------------------------------------------------ consensus_8723#6 ------------------------------------------------------------ consensus_8723#5 ------------------------------------------------------------ consensus_8723#4 ------------------------------------------------------------ consensus_8723#0 AACTCGAAGTTAACTAGAAGCATAATGGCAGGCATTTGATAAGGGGAAAACCCCCATTAA 775 consensus_8723#3 ------------------------------------------------------------ consensus_8723#1 ------------------------------------------------------------ consensus_8723#2 ------------------------------------------------------------ consensus_8723#6 ------------------------------------------------------------ consensus_8723#5 ------------------------------------------------------------ consensus_8723#4 ------------------------------------------------------------ consensus_8723#0 AAACTGGGTGTATGTTAGCCAATCCGCAATCCTGGTTTCNCACCATGGCGNGGTTCTCGC 835 consensus_8723#3 ------------------------------------------------------------ consensus_8723#1 ------------------------------------------------------------ consensus_8723#2 ------------------------------------------------------------ consensus_8723#6 ------------------------------------------------------------ consensus_8723#5 ------------------------------------------------------------ consensus_8723#4 ------------------------------------------------------------ consensus_8723#0 AGGCTATATTGCGAGGACACNCCAAGNTGCGTNGGCCTTCGTAATNGGAGCCTTCACTGG 895 consensus_8723#3 ------------------------------------------------------------ consensus_8723#1 ---------------------------------- consensus_8723#2 ---------------------------------- consensus_8723#6 ---------------------------------- consensus_8723#5 ---------------------------------- consensus_8723#4 ---------------------------------- consensus_8723#0 GAACCAGGANAACAGGGATTGTTGGGCCTCCCAG 929 consensus_8723#3 ---------------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||