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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8730#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 2162 fasta sequence
[CCGCGCGTGGTGATTGCCGTCATTCCGGACGCACCGGATGCGCCGGATGCGGTGGCCGTGAGCGACACGGAGGTGCTGCTGCGCTGGAAGCAACCGCGCAGCGACGGCAACTCGCAGGTGATCTGCTACAGCCTGGAGCAGAAGGAGCACGGCAAGGCGGACTGGGTCGACGTGGCGAGCAACATCGATCACGAGTTCTTCCTGGTGCACGATTTGCGCCCGACCGTGGGCTACCAGTTCCGGCTGGCGGCGTACAATCGTATCGGCTGGAGCGACCGCGGTCTGCCGACCAAGACGATCACGACGCTCGAGCCGGGTGCGCCCAAGATTCAGATTACGCGCGCGATGAAGCATCTGCAGCAGCTGACGGAGTCGGGCCAGCAGGTAGGACCGGAGGAGCGCACGGGCCGGCTGGACTACAGCTACGAGAAGACGCCGCTCAAGTGGAGCATCGAGGGCAACTACAACGAGAAGTACACGTTCATGTCGGAGATGGCGCGCGGCCGGTACTCGATCGTGGTGAAGGGACTGGAGAAGGCGACGGACAAGATTGTGGTGGCGAAGATCTTCGAGCTGGGCGACGAGCGGTCGGCCGAGGCGGTGGAGCG-GGAGTTCCATGTGCTACGCACGCTGCGCCACGAGCGCATTGGGGCGCTGCTCGCTGCGTTCCGGCCGAAAAACACGTCGATTGCGGCGCTGGTGATGGAGAAGCTGCAGGGCGCCGATGTGCTGACGTACCTGAGCAGCCGCTCGGAGTACAGTGAGCAGATAGTGGCGACGATCGTGAACCAGGTGCTGGATGGGTTGCAGTACCTGCACTGGCGCGGCATCTGCCATCTGGACCTGCAGCCGGACAACATCGTGATGGCGTCGGTGCGCCAGGTCAACATCAAGCTGGTGGACTTCGGATCGGCTCAGTACGTGTCGAAGCTCGGCACGAATGTTACACGCTCGGGCTGGTTGGACTTTATGCCACCGGAGGTCCTGAACGATGAGCCGGCGCTGCCACAGACCGACATCTGGACGGTCGGCTGCCTGACGTACCTGTTCCTGTCCGCCACCAGCCCGTTCCGTGGCCAGGATGAGGCGGAAACGCGTGCCAACATTAGCTTCGTGCGCTATCGCTTCGAGAACCTGTTCAAGGAGGTCACCGCGGAAGCAACGCGCTTCCTGATGCTCATCTTCAAGCGTGCACCAAACAAACGTCCAACGGTCGAGGAGTGCTTCGATCACCGCTGGTTGGTGCACACCGACTTCATGACGAAGAAGCGCGAGAGGGCGATCTTCCCTGGCAACCGTTTGAAGCAAATTTCCGAAGAATACCATACGATGAAAACGAACGAAGCCACCAAGTCGGAGACGATCTCCAACTTTGGTGGCCAATCCCCGCGCCAGCTGTTGCGTTCCAACAGCATCCAGGAGGAGCTGCTGACCACCTTCTAAAAAAAAAAAACACAATCGCGGCTTTATGCTTTTCTCGCTCCCTATCGCGTGTTTCAATATTCCGTTTTCAGCGTTAGTTATTTGCTTTGTTTTTGCTTCTTCTAGTAGAAAATGTGGCTCATGTTTTCCCCTCTGTTGCTATTTCGCAGCACAAGAATGCTTGATACGCCATTTTTCTCGCCTTTATCATTGGGCGTTCTTTACCGCTCGCTGGTGTCGAATTTATTAAACCCCATTGAAAAGACCCGAGAAAGAGCTTTATTGGGCGTTTCTTTTCCTTTTTGGTTTCGTTTGTTCAAAGAAGCTTTCGAGCTGTCTAGTTTCGGATTTGCTTATCCCATTTTCTGTCCGCTAGCAAT-GGAAAAGAGTTCTTATAT-AACGAAGATCAAACGATTTGAAGTAGTAAAGAAAAGTGAGAG--AAAAAACATTAGAAAAAAGGGTTTTTACACTTAAACCAAC-AAAAAAAACAATGAAACGAGTAAACACAA-TCATGTTCTTTCTATACAATCGTACGTTTATACAAACACGCGCAGCTCACATACACATTTAGCCGGTATGTGGTGCTGCCTGTTTGGAGTTGTTCGGGAGAGCCGCTTATTTAAAAAAAATGGGATTTTGGACCACGCAATCCCCCGGGGGATCTTTTTTTATATGACTTTTTTAACCGCAAACCACCACTGTTATACACACATCCCTAAGAAAAACCGGGGCTTTGTGCT]
[+] EMBL BM598294 [CCGCGCGTGGTGATTGCCGTCATTCCGGACGCACCGGATGCGCCGGATGCGGTGGCCGTGAGCGACACGGAGGTGCTGCTGCGCTGGAAGCAACCGCGCAGCGACGGCAACTCGCAGGTGATCTGCTACAGCCTGGAGCAGAAGGAGCACGGCAAGGCGGACTGGGTCGACGTGGCGAGCAACATCGATCACGAGTTCTTCCTGGTGCACGATTTGCGCCCGACCGTGGGCTACCAGTTCCGGCTGGCGGCGTACAATCGTATCGGCTGGAGCGACCGCGGTCTGCCGACCAAGACGATCACGACGCTCGAGCCGGGTGCGCCCAAGATTCAGATTACGCGCGCGATGAAGCATCTGCAGCAGCTGACGGAGTCGGGCCAGCAGGTAGGACCGGAGGAGCGCACGGGCCGGCTGGACTACAGCTACGAGAAGACGCCGCTCAAGTGGAGCATCGAGGGCAACTACAACGAGAAGTACACGTTCATGTCGGAGATGGCGCGCGGCCGGTACTCGATCGTGGTGAAGGGACTGGAGAAGGCGACGGACAAGATTGTGGTGGCGAAGATCTTCGAGCTGGGCGACGAGCGGTCGGCCGAGGCGGTGGAGCGTGGAGTTCCATGTGCTACGCACGC ]
[+] EMBL BM621362 [ ccgTACAGCTACGAGAAGACGCCGCTCAAGTGGAGCATCGAGGGCAACTACAACGAGAAGTACACGTTCATGTCGGAGATGGCGCGCGGCCGGTACTCGATCGTGGTGAAGGGACTGGAGAAGGCGACGGACAAGATTGTGGTGGCGAAGATCTTCGAGCTGGGCGACGAGCGGTCGGCCGAGGCGGTGGAGCG GGAGTTCGATGTGCTGCGCACGCTGCGCCACGAGCGCATTGGGGCGCTGCTCGCTGCGTTCCGGCCGAAAAACACGTCGATTGCGGCGCTGGTGATGGAGAAGCTGCAGGGCGCCGATGTGCTGACGTACCTGAGCAGCCGCTCGGAGTACAGTGAGCAGATAGTGGCGACGATCGTGAACCAGGTGCTGGATGGGTTGCAGTACCTGCACTGGCGCGGCATCTGCCATCTGGACCTGCAGCCGGACAACATCGTGATGGCGTCGGTGCGCCAGGTCAACATCAAGCTGGTGGACTTCGGATCGGCTCAGTACGTGTCGAAGCTCGGCACGAATGTTACACGCTCGGGCTGGTTGGACTTTATGCCACCGGAGGTCCTGA ]
[+] EMBL BM620629 [ ccgGCTGCTCGCTGCGTTCCGGCCGAAGAACACGTCGATTGCGGCGCTGGTGATGGAGAAGCTGCAGGGCGCCGATGTGCTGACGTACCTGAGCAGCCGCTCGGAGTACAGTGAGCAGATAGTGGCGACGATCGTGAACCAGGTGCTGGATGGGTTGCAGTACCTGCACTGGCGCGGCATCTGCCATCTGGACCTGCAGCCGGACAACATCGTGATGGCGTCGGTGCGCCAGGTCAACATCAAGCTGGTGGACTTCGGATCAGCCCAGTACGTGTCGAAGCTCGGCACGAATGTTACCCGCTCGGGCTGGCTGGACTTTATGCCACCGGAGGTCCTGAACGATGAGCCGGCGCTGCCACAGACCGACATCTGGACGGTCGGCTGCCTGACGTACCTGTTCCTGTCCGCCACCAGCCCGTTCCGTGGCCAGGATGAGGCGGAAACGCGTGCCAACATTAGCTTCGTGCGCTATCGCTTCGAGAACCTGTTCAAGGAGGTCACCGCGGAAGCAACGCGCTTCCTGATGCTCATCTTCAAGCGTGCACCAAACAAACGTCCAACGGTCGAGGAGTGCTTCGATCACCGCTGGTTGGTGCACACCGACTTCATGACGAAGAAGCGCGAGAGGGCGATCTTCCCTGGCAACCGTTTGAAGCAAATTTCCGAAGAATACCATACGATGAA ]
[+] EMBL BM626018 [ ccGGTCACCGCGGAAGCAACGCGCTTCCTGATGCTCATCTTCAAGCGTGCACCAAACAAACGTCCAACGGTCGAGGAGTGCTTCGATCACCGCTGGCTGGTGCACACCGACTTCATGACGAAGAAGCGCGAGAGGGCGATCTTCCCTGGCAACCGTTTGAAGCAAATTTCCGAAGAATACCATACGATGAAAACGAACGAAGCCACCAAGTCGGAGACGATCTCCAACTTTGGTGGCCAATCCCCGCGCCAGCTGTTGCGTTCCAACAGCATCCAGGAGGAGCTGCTGACCACCTTCTAAAAAAAAAAAACACAATCGCGGCTTTATGCTTTTCTCGCTCCCTATCGCGTGTTTCAATATTCCGTTTTCAGCGTTAGTTATTTGCTTTGTTTTTGCTTCTTCTAGTAGAAAATGTGGCTCATGTTTTCCCCTCTGTTGCTATTTCGCAGCACAAGAATGCTTGATACGCCATTTTTCTCGCCTTTATCATTGGGCGTTCTTTACCGCTCGCTGGTGTCGAATTTATTAAACCCCATTGAAAAGACCCGAGAAAGAGCTTTATTGGGCGTTTCTTTTCCTTTTTGGTTTCGTTTGTTCAAAGAAGCTTTCGAGCTGTCTAGTTTCGGATTTGCTTATCCCATTTTCTGTCCGCTAGCAATGGGAAAAGAGTTCTTATAT AACGAA ]
[+] EMBL BX621579 [ ATGCTTTTCTCGCTCCCTATCGCGTGTTTCAATATTCCGTTTTCAGCGTTAGTTATTTGCTTTGTTTTTGCTTCTTCTAGTAGAAAATGTGGCTCATGTTTTCCCCTCTGTTGCTATTTCGCAGCACAAGAATGCTTGATACGCCATTTTTCTCGCCTTTATCATTGGGCGTTCTTTACCGCTCGCTGGTGTCGAATTTATTAAACCCCATTGAAAAGACCCGAGAAAGAGCTTTATTGGGCGTTTCTTTTCCTTTTTGGTTTCGTTTGTTCAAAGAAGCTTTCGAGCTGTCTAGTTTCGGATTTGCTTATCCCATTTTCTGTCCGCTAGCAAT GGAAAAGAGTTCTTATATAAACGAAGATCAAACGATTTGAAGTAGTAAAGAAAAGTGAGAG AAAAAACATTAGAAAAAAGGGTTTTTACACTTAAACCAAC AAAAAAAACAATGAAACGAGTAAACACAA TCATGTTCTTTCTATACAATCGTACGTTTATACAAACACGCGCAGCTCACATACACATTTAGCCGGTATGTGGTGCTGCCTGTTTGGAGTTGTTCGGGAG ]
[+] EMBL BM650115 [ ccgCCGTTTTCAGCGTTAGTTATTTGCTTTGTTTTTGCTTCTTCTAGTAGAAAATGTGGCTCATGTTTTCCCCTCTGTTGCTATTTCGCAGCACAAGAATGCTTGATACGCCATTTTTCTCGCCTTTATCATTGGGCGTTCTTTACCGCTCGCTGGTGTCGAATTTATTAAACCCCACTGAAAAGACCCGAGAAAGTGCTTTATTGGGCGTTTCTTTTCCTTTTTGGTTTCGTTTGTTCAGAGTAGCTTTCGATCTGTCGAGTTTCGGCTTTGCTTATCCCATTTTCTGTCCGCTAGCACT GGAAAAGAGTACTTATATAAACGAAGATCAAACGATTTAAAGAAGTAAAGAAAAGAGAGAGAAAAAAAACATTAGAAAAAAGGGTTTTTACACTTAAACCAACAAAAAAAAACAATGAAACGAGTAAACACAATTCTTGTTCTTTCTATACAATCGTACGTTTATACAAACACGCGCAGCACACATACACATTTAGCCGGTATGTGGTGCTGCCTGTTTGGAGTTGTTCGGGAGAGCCGCTTATTTAAAAAAAATGGGATTTTGGACCACGCAATCCCCCGGGGGATCTTTTTTTATATGACTTTTTTAACCGCAAACCACCACTGTTATACACACATCCCTAAGAAAAACCGGGGCTTTGTGCT]
consensusID : consensus_8730#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 736 fasta sequence
[ACCAATNCCCCCCCACGTTAATAACACAATCATGTCCTTTCTATACATCGTACCTTTATACANACACACCCGCAGCTCACATACACATTTACCGGCTATGTGGTGCTGCCTGTTTGCACTTGTTCGGAAGCCGCTTATTTAAAAAAAAATGGGATTTTGGACCACGCAATCCCCCGGGGGATCTTTTTNTATATGACTTTTTTAACCGCAAACCACCACTGTTATACACACATCCCTAAGAAAAACCGGGGCTTTGTGCTGGTCCGCCCGCCGCTGCAGCGTGTTGCTTTAGCTTTAGTTATTTAGGGAAACTGTTAGCAAACAAAAAAAAAAGAATAGAAAAGAAAGAGAAAAAATCTGCCGTTTGTGTACTCCCTTCACCGGCAGGGGGTGGATGTGGTGCGGGTTTCCGGGTTTTGAGCCGTGAAACGCACCACAATTTTCCACCATCGAAGGAAACAAACAATCTAAAAAA-CATAGGGAGGAATACAGAGTGTAACTTATTTATTTGTATATTGTATATTTACTCTATTACGCTATTGCTTTAGTNGATACACAAAGTGCTACACTTTTTGCTGCTTCATTTGCGACTCGCGATCATTATAGTGTGGTCAGGGTATCGACAGGAGCGGAGGGGTTTTCTTTTTATTCATTCACTTCAGCCAATTTATTAGGAGAAGGTAATCTGACCGGTAAAGTGTAACTGGATGTTGGATAAATAAAATTGTTTTTACGT]
[+] EMBL AL934525 [ACCAATNCCCCCCCACGTTAATAACACAATCATGTCCTTTCTATACATCGTACCTTTATACANACACACCCGCAGCTCACATACACATTTACCGGCTATGTGGTGCTGCCTGTTTGCACTTGTTCGGAAGCCGCTTATTTAAAAAAAAATGGGATTTTGGACCACGCAATCCCCCGGGGGATCTTTTTNTATATGACTTTTTTAACCGCAAACCACCACTGTTATACACACATCCCTAAGAAAAACCGGGGCTTTGTGCTGGTCCGCCCGCCGCTGCAGCGTGTTGCTTTAGCTTTAGTTATTTAGGGAAACTGTTAGCAAACAAAAAAAAAAGAATAGAAAAGAAAGAGAAAAAATCTGCCGTTTGTGTACTCCCTTCACCGGCAGGGGGTGGATGTGGTGCGGGTTTCCGGGTTTTGAGCCGTGAAACGCACCACAATTTTCCACCATCGAAGGAAACAAACAATCTAAAAAA CATAGGGAGGAATACAGAGTGTAACTTATTTATTTGTATATTGTATATTTACTCTATTACGCTATTGCTTTAGTNGATACACAAAGTGCTACACTTTTTGCTGCTTCATTTGCGACTCGCGATCATTATAGTGTGGTCAGGGTATCGACA ]
[+] EMBL BX614809 [ GGTTTCCGGGTTTTGAGCCGTGAAACGTACCACAATTTTCCACTATCGAA CAAACAAACAAACTAAAAAAGAATAGGGAGGAATACAGAGTGTAACTTATTTATGTGTATATTGTATATTTACTCTATTACG TATTGCTTTAGT GATACACAAAGTGCTACA TTTTGCTGCTTCATTTGCGACTCGCGATCATTATAGGGTGGTCAGGGTATCGAAGGGAGCGGAGGGGTTTTCTTTTTATTCATTCACTTCAGCCAATTTATTAGGAGAAGGTAATCTGACCGGTAAAGTGTAACTGGATGTTGGATAAATAAAATTGTTTTTACGT]
consensusID : consensus_8730#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 659 fasta sequence
[CAGAATACCCCGCGTTATCTGTTGCTATTTCGCAGCACAAGAATGCTTGATACGCCATTTTTCTCACCTTATATCATATGGGCGTACTTANACCGCTACGCTGGTGTCGAATTTATTAAACCCCATTGAAAAGACCCGAGAAAGCGCTTTATTAGGGCGTATCTATATTCCTATATTTAGGTATTCGTATTGTATACAAAGAAGCTATTCGAGCTAGTCGAGTAATACGGGCTATANGCTATATACCCATGTTACTAGTACCTGCTAGCAACTTGGCAAAAAGAGGTACCTTAATATAAAAACCGAAAGGAATCAACAACGGAAATCNACANAGGACACGTAACCACGGCAACGGAAGGNCGAGGAGACACAANANNACACCATCTCAACGGACACCATNACACACACAATTGGGGTATGANNATAACGAACCAACACAAAACACCACAACCAACAGCCAAACACACACGNAAAGCCANNNTCTGGANAAAANCGGAAGGTTAACCACAGCCAACCAAAAANCNNAAAATNGGGTTCACCTCCTACCACCTTAATTACTCACAACTCTCCGGGTTCAACGGTTANATTATAAACCCAAACAGCACACAGCCGGACCAACACGCTNCCAGACCACTTAACCNNCACCAATTTCTCACAGG]
[+] EMBL AL692175 [CAGAATACCCCGCGTTATCTGTTGCTATTTCGCAGCACAAGAATGCTTGATACGCCATTTTTCTCACCTTATATCATATGGGCGTACTTANACCGCTACGCTGGTGTCGAATTTATTAAACCCCATTGAAAAGACCCGAGAAAGCGCTTTATTAGGGCGTATCTATATTCCTATATTTAGGTATTCGTATTGTATACAAAGAAGCTATTCGAGCTAGTCGAGTAATACGGGCTATANGCTATATACCCATGTTACTAGTACCTGCTAGCAACTTGGCAAAAAGAGGTACCTTAATATAAAAACCGAAAGGAATCAACAACGGAAATCNACANAGGACACGTAACCACGGCAACGGAAGGNCGAGGAGACACAANANNACACCATCTCAACGGACACCATNACACACACAATTGGGGTATGANNATAACGAACCAACACAAAACACCACAACCAACAGCCAAACACACACGNAAAGCCANNNTCTGGANAAAANCGGAAGGTTAACCACAGCCAACCAAAAANCNNAAAATNGGGTTCACCTCCTACCACCTTAATTACTCACAACTCTCCGGGTTCAACGGTTANATTATAAACCCAAACAGCACACAGCCGGACCAACACGCTNCCAGACCACTTAACCNNCACCAATTTCTCACAGG]
consensusID : consensus_8730#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 630 fasta sequence
[CCGCGGACGCGTGGGTTTCGCAGCACAAGAATGCTTGATACGCCATTTTTCTCGCCTTTATCATTGGGCGTTCTTTACCGCTCGCTGGTGTCGAATTTATTAAACCCCATTGAAAAGACCCGAGAAAGAGCTTTATTGGGCGTTTCTTTTCCTTTTTGGTTTCGTTTGTTCAGAGTAGCTTTCGAGCTGTCGAGTTTCGGCTTTGCTTATCCCATGTTCTGTCCGCTAGCACTGGAAAAGAGTACTTATATAAACGAAGATCAAACGATTTAAAGAAGTAAAGAAAAGAGAGAGAAAAAAAACATTAGAAAAAAGGGTTTTTACACTTAAACCAACAAAAAAAAACAATGAAACGAGTAAACACAATCATGTTCTTTCTATACAATCGTACGTTTATACAAACACGCGCAGCTCACATACACATTTAGCCGGTATGTGGTGCAGCCTGTTTGGAGTTGTTCGGGAGAGCCGCTTATTAAAAAAAATGGGATTTTGGACCACGCAATCCCCCGGGGGATCTTTTTTTATATGACTTTTTTAACCGCAAACCACCACTGTTATACACACATCCCTAAGAAAAACCGGGGCTTTGTGCTGGTCCGCCCGCCGCTGCAGCGTGTTGCTTTAGTT]
[+] EMBL BM656143 [CCGCGGACGCGTGGGTTTCGCAGCACAAGAATGCTTGATACGCCATTTTTCTCGCCTTTATCATTGGGCGTTCTTTACCGCTCGCTGGTGTCGAATTTATTAAACCCCATTGAAAAGACCCGAGAAAGAGCTTTATTGGGCGTTTCTTTTCCTTTTTGGTTTCGTTTGTTCAGAGTAGCTTTCGAGCTGTCGAGTTTCGGCTTTGCTTATCCCATGTTCTGTCCGCTAGCACTGGAAAAGAGTACTTATATAAACGAAGATCAAACGATTTAAAGAAGTAAAGAAAAGAGAGAGAAAAAAAACATTAGAAAAAAGGGTTTTTACACTTAAACCAACAAAAAAAAACAATGAAACGAGTAAACACAATCATGTTCTTTCTATACAATCGTACGTTTATACAAACACGCGCAGCTCACATACACATTTAGCCGGTATGTGGTGCAGCCTGTTTGGAGTTGTTCGGGAGAGCCGCTTATTAAAAAAAATGGGATTTTGGACCACGCAATCCCCCGGGGGATCTTTTTTTATATGACTTTTTTAACCGCAAACCACCACTGTTATACACACATCCCTAAGAAAAACCGGGGCTTTGTGCTGGTCCGCCCGCCGCTGCAGCGTGTTGCTTTAGTT]
consensusID : consensus_8730#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 390 fasta sequence
[CAGGCAAGAATCGGCACGATGGAGTTGGCGCGGCCGGTACTCGATCGTGGTGAAGGGACTGGAGAAGGCGACGGACAAGATTGTGGTGGCGAAGATCTTCGAGCTGGGCGACGAGCGGTCGGCCGAGGCGGTGGAGCGGGAGTTCGATGTGCTGCGCACGCTGCGCCACGAGCGCATTGGGGCGCTGCTCGCTGCGTTCCGGCCGAAAAACACGTCGATTGCGGCGCTAGGTGATGGAGAAGCTGCAGGGGCGCCGATGTGCTGACGTACCTAGCAGCCGCTCGGAGTACAGTGAGCAGATAGTGGCGACGATGGTGAACCAGGTGCTGGATGGGTTGCAGTACCTGCACTGGCGCGGCGATCTGCCAATCTGGACCTGCCAGGCCGGAC]
[+] EMBL BX468907 [CAGGCAAGAATCGGCACGATGGAGTTGGCGCGGCCGGTACTCGATCGTGGTGAAGGGACTGGAGAAGGCGACGGACAAGATTGTGGTGGCGAAGATCTTCGAGCTGGGCGACGAGCGGTCGGCCGAGGCGGTGGAGCGGGAGTTCGATGTGCTGCGCACGCTGCGCCACGAGCGCATTGGGGCGCTGCTCGCTGCGTTCCGGCCGAAAAACACGTCGATTGCGGCGCTAGGTGATGGAGAAGCTGCAGGGGCGCCGATGTGCTGACGTACCTAGCAGCCGCTCGGAGTACAGTGAGCAGATAGTGGCGACGATGGTGAACCAGGTGCTGGATGGGTTGCAGTACCTGCACTGGCGCGGCGATCTGCCAATCTGGACCTGCCAGGCCGGAC]
consensusID : consensus_8730#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 376 fasta sequence
[CCGAAAAAATCTGCCGTTTGTGTGTGTACTCCCTTCACCGGCAGGGGGTGGATGTGGTGCGGGTTTCCGAGTTTTGAGCCGTGAAACGCACCACATTTGTCCACCATCGAACAAACAAACTAAAAAAAAATAGGGAGGAATACAGAGTGTAACTTATTTATTTGTATATTGTATATTTACTCTATTACGTATTGCTTTAGTGATACACAAAGTGCTACATTTTGCTGCTTCATTTGCGACTCGCGATCATTATAGTGTGGTCAGGGTATCGAATGGAGCGGGGGGGTTTTCTTTTTATTCATTCACTTCAGCCAATTTATCAGTCATTAGGAGAAGGTAATCGGACCGGTAAAGTGTAACTGGACGTTGGATAAAT]
[+] EMBL BM655571 [CCGAAAAAATCTGCCGTTTGTGTGTGTACTCCCTTCACCGGCAGGGGGTGGATGTGGTGCGGGTTTCCGAGTTTTGAGCCGTGAAACGCACCACATTTGTCCACCATCGAACAAACAAACTAAAAAAAAATAGGGAGGAATACAGAGTGTAACTTATTTATTTGTATATTGTATATTTACTCTATTACGTATTGCTTTAGTGATACACAAAGTGCTACATTTTGCTGCTTCATTTGCGACTCGCGATCATTATAGTGTGGTCAGGGTATCGAATGGAGCGGGGGGGTTTTCTTTTTATTCATTCACTTCAGCCAATTTATCAGTCATTAGGAGAAGGTAATCGGACCGGTAAAGTGTAACTGGACGTTGGATAAAT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_8730#0 CCGCGCGTGGTGATTGCCGTCATTCCGGACGCACCGGATGCGCCGGATGCGGTGGCCGTG 60
consensus_8730#4 ------------------------------------------------------------
consensus_8730#2 ------------------------------------------------------------
consensus_8730#3 ------------------------------------------------------------
consensus_8730#1 ------------------------------------------------------------
consensus_8730#5 ------------------------------------------------------------
consensus_8730#0 AGCGACACGGAGGTGCTGCTGCGCTGGAAGCAACCGCGCAGCGACGGCAACTCGCAGGTG 120
consensus_8730#4 ------------------------------------------------------------
consensus_8730#2 ------------------------------------------------------------
consensus_8730#3 ------------------------------------------------------------
consensus_8730#1 ------------------------------------------------------------
consensus_8730#5 ------------------------------------------------------------
consensus_8730#0 ATCTGCTACAGCCTGGAGCAGAAGGAGCACGGCAAGGCGGACTGGGTCGACGTGGCGAGC 180
consensus_8730#4 ------------------------------------------------------------
consensus_8730#2 ------------------------------------------------------------
consensus_8730#3 ------------------------------------------------------------
consensus_8730#1 ------------------------------------------------------------
consensus_8730#5 ------------------------------------------------------------
consensus_8730#0 AACATCGATCACGAGTTCTTCCTGGTGCACGATTTGCGCCCGACCGTGGGCTACCAGTTC 240
consensus_8730#4 ------------------------------------------------------------
consensus_8730#2 ------------------------------------------------------------
consensus_8730#3 ------------------------------------------------------------
consensus_8730#1 --ACCAATNCCCCCCCACGTTAATAACACAATCATGTCCTTTCTATACATCGTACCTTTA 58
consensus_8730#5 ------------------------------------------------------------
consensus_8730#0 CGGCTGGCGGCGTACAATCGTATCGGCTGGAGCGACCGCGGTCTGCCGACCAAGACGATC 300
consensus_8730#4 ------------------------------------------------------------
consensus_8730#2 ------------------------------------------------------------
consensus_8730#3 ------------------------------------------------------------
consensus_8730#1 TACANACACACCCGCAGCTCACATACACATTTACCGGCTATGTGGTGCTGCCTGTTTGCA 118
consensus_8730#5 ------------------------------------------------------------
consensus_8730#0 ACGACGCTCGAGCCGGGTGCGCCCAAGATTCAGATTACGCGCGCGATGAAGCATCTGCAG 360
consensus_8730#4 ------------------------------------------------------------
consensus_8730#2 ------------------------------------------------------------
consensus_8730#3 ------------------------------------------------------------
consensus_8730#1 CTTGTTCGGAAGCCGCTTATTTAAAAAAAAATGGGATTTTGGACCACGCAATCCCCCGGG 178
consensus_8730#5 ------------------------------------------------------------
consensus_8730#0 CAGCTGACGGAGTCGGGCCAGCAGGTAGGACCGGAGGAGCGCACGGGCCGGCTGGACTAC 420
consensus_8730#4 ------------------------------------------------------------
consensus_8730#2 ---------------------------------CAGAATACCCCGCGTTATCTGTTGCTA 27
consensus_8730#3 ------------------------------------------CCGCGG-ACGCGTGG--G 15
consensus_8730#1 GGATCTTTTTNTATATGACTTTTTTAACCGCAAACCACCACTGTTATACACACATCCCTA 238
consensus_8730#5 ------------------------------------------------------------
consensus_8730#0 AGCTACGAGAAGACGCCGCTCAAGTGGAGCATCGAGGGCAACTACAACGAGAAGTACACG 480
consensus_8730#4 -----------------------------------------------CAGGCAAGAATCG 13
consensus_8730#2 TTTCGCAGCACAAGAATGCTTGATACGCCATTTTTCTCACCTTATATCATATGGGCGTAC 87
consensus_8730#3 TTTCGCAGCACAAGAATGCTTGATACGCCATTTTTCTCGCCTT-TATCAT-TGGGCGTTC 73
consensus_8730#1 AGAAAAACCGGGGCTTTGTGCTGGTCCGCCCGCCGCTGCAGCGTGTTGCTTTAGCTTTAG 298
consensus_8730#5 ------------------------------------------------------------
consensus_8730#0 TT-CATGTCGGAGATGGCGCGCGGCCGGTACTCGATCGTGGTGAAGGGACTGGAGAAGGC 539
consensus_8730#4 G--CACGATGGAGTTGGCGC--GGCCGGTACTCGATCGTGGTGAAGGGACTGGAGAAGGC 69
consensus_8730#2 TTANACCGCTACGCTGGTGTCGAATT--TATTAAACCCCATTGAAAAGACCCGAGAAAGC 145
consensus_8730#3 TT-TACCGCT-CGCTGGTGTCGAATT--TATTAAACCCCATTGAAAAGACCCGAGAAAGA 129
consensus_8730#1 TTATTTAGGGAAACTGTTAGCAAACAAAAAAAAAAGAATAGAAAAGAAAGAGAAAAAATC 358
consensus_8730#5 -------------------------------------------------CCGAAAAAATC 11
* **
consensus_8730#0 -GACGGACAAGATTGTGGTGGCG----------AAGATCTTCGAGCTGGGCGACGAGCGG 588
consensus_8730#4 -GACGGACAAGATTGTGGTGGCG----------AAGATCTTCGAGCTGGGCGACGAGCGG 118
consensus_8730#2 -GCTTTATTAGGGCGTATCTATATTCCTATATTTAGGTATTCGTATTGTATACAAAGAAG 204
consensus_8730#3 -GCTTTATT-GGGCGTTTCTTT--TCCT---TTTTGGT-TTCGTTT---GTTCAGAGTAG 178
consensus_8730#1 TGCCGTTTGTGT----ACTCCCT---------TCACCGGCAGGGGGTGGATGTGGTGCGG 405
consensus_8730#5 TGCCGTTTGTGTGTGTACTCCCT---------TCACCGGCAGGGGGTGGATGTGGTGCGG 62
* * * * *
consensus_8730#0 TCGGCCGAGGCGGTGGAGCG---GGAGTTCCATGTG--CTACGCACGCTGCG-----CCA 638
consensus_8730#4 TCGGCCGAGGCGGTGGAGCG---GGAGTTCGATGTG--CTGCGCACGCTGCG-----CCA 168
consensus_8730#2 CTATTCGAGCTAGTCGAGTAATACGGGCTATANGCTATATACCCATGTTACTAGTACCTG 264
consensus_8730#3 CT-TTCGAGCT-GTCGAGT--TTCGGCTT---TGCT-TAT-CCCATGTTC----TGTCCG 225
consensus_8730#1 GTTTCCGGGTT--TTGAGCC--GTGAAACGCACCACAATTTTCCACCATCGA------AG 455
consensus_8730#5 GTTTCCGAGTT--TTGAGCC--GTGAAACGCACCACATTTGTCCACCATCGA------AC 112
** * * *** * * ** *
consensus_8730#0 CGAGCGCATTGG--GGCGCTGCTCGCTGCGTTCCGGCCGAAAAACACGTCGATTGCGGCG 696
consensus_8730#4 CGAGCGCATTGG--GGCGCTGCTCGCTGCGTTCCGGCCGAAAAACACGTCGATTGCGGCG 226
consensus_8730#2 CTAGCAACTTGGCAAAAAGAGGTACCTTAATATAAAAACCGAAAGGAATCAACAACGGAA 324
consensus_8730#3 CTAGCA--CTGGAAAAGAGTACTTATATAA-ACGAAGATCAAACGATTTAAAGAAGTAAA 282
consensus_8730#1 GAAACAAACAATCTAAAAAACATAGGGAGGAATACAGAGTGTAACTTATTTATTTGTATA 515
consensus_8730#5 -AAACAAACTA---AAAAAAAATAGGGAGGAATACAGAGTGTAACTTATTTATTTGTATA 168
* * * * * *
consensus_8730#0 CT-GGTGATGGAGAAGCTGCAGGG-CGCCGATGTGCTGACGTACCTGAGCAGCCGCTCGG 754
consensus_8730#4 CTAGGTGATGGAGAAGCTGCAGGGGCGCCGATGTGCTGACGTACCT-AGCAGCCGCTCGG 285
consensus_8730#2 ATCNACANAGGACACGTAACCACGGCAACGGAAGGNCGA-GGAGACACAANANNACACC- 382
consensus_8730#3 GAAAAGAGAGAGAAAAAAAACATTAGAAAAAAGGGTTTTTACACTTAAACCAACAAAAA- 341
consensus_8730#1 TTGTATATT---TACTCTATTACGCTATTGCTTTAGTNG-ATACACAAAGTGCTACACTT 571
consensus_8730#5 TTGTATATT---TACTCTATTACG-TATTGCTTTAGTG--ATACACAAAGTGCTACA--T 220
* *
consensus_8730#0 AGTACAG--TGAGCAGATAGTGGCGACGATCGTGAACCAGGTGCTGGATGGGTTGCAGTA 812
consensus_8730#4 AGTACAG--TGAGCAGATAGTGGCGACGATGGTGAACCAGGTGCTGGATGGGTTGCAGTA 343
consensus_8730#2 ATCTCAA--CGGACAC-CATNACACACACAATTGGGGTATGANNATAA-CGAAC-CAACA 437
consensus_8730#3 AAAACAA--TGAA-AC-GAGTAAACACAATCATGTTCTTTCTATACAATCGTAC-GTTTA 396
consensus_8730#1 TTTGCTGCTTCATTTGCGACTCGCGATCATTATAGTGTGGTCAGGGTATCGACAGGAGCG 631
consensus_8730#5 TTTGCTGCTTCATTTGCGACTCGCGATCATTATAGTGTGGTCAGGGTATCGAATGGAGCG 280
* * * * * *
consensus_8730#0 CCTGCACTGGCGCGGC-ATCTGCCA-TCTGGACCTGC--AGC--CGGACAACATCGTGAT 866
consensus_8730#4 CCTGCACTGGCGCGGCGATCTGCCAATCTGGACCTGCCAGGC--CGGAC----------- 390
consensus_8730#2 CA-AAACAC-CACAACCAACAGCCA-AACACACACGNAAAGC--CANNNTCTGGANAAAA 492
consensus_8730#3 TACAAACACGCGCAGCTCACATACA-CATTTAGCCGGTATGTGGTGCAGCCTGTTTGGAG 455
consensus_8730#1 GAGGGGTTTTCTTTTTATTCATTCA--CTTCAGCCAATTTAT--------TAGGAGAAGG 681
consensus_8730#5 GGGGGGTTTTCTTTTTATTCATTCA--CTTCAGCCAATTTATC-AGTCATTAGGAGAAGG 337
* * ** *
consensus_8730#0 GGCGTCGGTGCGCCAGGTCAACATCAAGCTGGTGGACTTCGGATCGGCTCAGTACGTGTC 926
consensus_8730#4 ------------------------------------------------------------
consensus_8730#2 NCGGAAGGTTAACCACAGCCAACCAAAAANCNNAAAATNGGGTTCACCTCCTACCAC--- 549
consensus_8730#3 TTGTTCGGGAGAGC-CGCTTATTAAAAAAAATGGGATTTTGGACCACGCAATCCCCCGGG 514
consensus_8730#1 TAATCTGACCGGTAAAGTGTAACTGGATGTTGGATAAATAAAATTGTTTTTACGT----- 736
consensus_8730#5 TAATCGGACCGGTAAAGTGTAACTGGACGTTGGATAAAT--------------------- 376
consensus_8730#0 GAAGCTCGGCACGAATGTTACACGCTCGGGCTGGTTGGACTTTATGCCACCGGAGGTCCT 986
consensus_8730#4 ------------------------------------------------------------
consensus_8730#2 ---CTTAATTACTCACAACTCTCCGGGTTCAACGGTTANATTATAAACCCAAACAGCACA 606
consensus_8730#3 GGATCTTTTTTTATATGACTTTTTTAACCGCAAACCACCACTGTTA-TACACACATCCCT 573
consensus_8730#1 ------------------------------------------------------------
consensus_8730#5 ------------------------------------------------------------
consensus_8730#0 GAACGATGAGCCGGCGCTGCCACAGACCGACATCTGGACGGTCGGCTGCCTGACGTACCT 1046
consensus_8730#4 ------------------------------------------------------------
consensus_8730#2 CAGCCGGACCAACACGCTN--CCAGACCACTTAAC-CNNCACCAATTTCTCACAGG---- 659
consensus_8730#3 AAGAAAAACCGGGGCTTTGTGCTGGTCCGCCCGCCGCTGCAGCGTGTTGCTTTAGTT--- 630
consensus_8730#1 ------------------------------------------------------------
consensus_8730#5 ------------------------------------------------------------
consensus_8730#0 GTTCCTGTCCGCCACCAGCCCGTTCCGTGGCCAGGATGAGGCGGAAACGCGTGCCAACAT 1106
consensus_8730#4 ------------------------------------------------------------
consensus_8730#2 ------------------------------------------------------------
consensus_8730#3 ------------------------------------------------------------
consensus_8730#1 ------------------------------------------------------------
consensus_8730#5 ------------------------------------------------------------
consensus_8730#0 TAGCTTCGTGCGCTATCGCTTCGAGAACCTGTTCAAGGAGGTCACCGCGGAAGCAACGCG 1166
consensus_8730#4 ------------------------------------------------------------
consensus_8730#2 ------------------------------------------------------------
consensus_8730#3 ------------------------------------------------------------
consensus_8730#1 ------------------------------------------------------------
consensus_8730#5 ------------------------------------------------------------
consensus_8730#0 CTTCCTGATGCTCATCTTCAAGCGTGCACCAAACAAACGTCCAACGGTCGAGGAGTGCTT 1226
consensus_8730#4 ------------------------------------------------------------
consensus_8730#2 ------------------------------------------------------------
consensus_8730#3 ------------------------------------------------------------
consensus_8730#1 ------------------------------------------------------------
consensus_8730#5 ------------------------------------------------------------
consensus_8730#0 CGATCACCGCTGGTTGGTGCACACCGACTTCATGACGAAGAAGCGCGAGAGGGCGATCTT 1286
consensus_8730#4 ------------------------------------------------------------
consensus_8730#2 ------------------------------------------------------------
consensus_8730#3 ------------------------------------------------------------
consensus_8730#1 ------------------------------------------------------------
consensus_8730#5 ------------------------------------------------------------
consensus_8730#0 CCCTGGCAACCGTTTGAAGCAAATTTCCGAAGAATACCATACGATGAAAACGAACGAAGC 1346
consensus_8730#4 ------------------------------------------------------------
consensus_8730#2 ------------------------------------------------------------
consensus_8730#3 ------------------------------------------------------------
consensus_8730#1 ------------------------------------------------------------
consensus_8730#5 ------------------------------------------------------------
consensus_8730#0 CACCAAGTCGGAGACGATCTCCAACTTTGGTGGCCAATCCCCGCGCCAGCTGTTGCGTTC 1406
consensus_8730#4 ------------------------------------------------------------
consensus_8730#2 ------------------------------------------------------------
consensus_8730#3 ------------------------------------------------------------
consensus_8730#1 ------------------------------------------------------------
consensus_8730#5 ------------------------------------------------------------
consensus_8730#0 CAACAGCATCCAGGAGGAGCTGCTGACCACCTTCTAAAAAAAAAAAACACAATCGCGGCT 1466
consensus_8730#4 ------------------------------------------------------------
consensus_8730#2 ------------------------------------------------------------
consensus_8730#3 ------------------------------------------------------------
consensus_8730#1 ------------------------------------------------------------
consensus_8730#5 ------------------------------------------------------------
consensus_8730#0 TTATGCTTTTCTCGCTCCCTATCGCGTGTTTCAATATTCCGTTTTCAGCGTTAGTTATTT 1526
consensus_8730#4 ------------------------------------------------------------
consensus_8730#2 ------------------------------------------------------------
consensus_8730#3 ------------------------------------------------------------
consensus_8730#1 ------------------------------------------------------------
consensus_8730#5 ------------------------------------------------------------
consensus_8730#0 GCTTTGTTTTTGCTTCTTCTAGTAGAAAATGTGGCTCATGTTTTCCCCTCTGTTGCTATT 1586
consensus_8730#4 ------------------------------------------------------------
consensus_8730#2 ------------------------------------------------------------
consensus_8730#3 ------------------------------------------------------------
consensus_8730#1 ------------------------------------------------------------
consensus_8730#5 ------------------------------------------------------------
consensus_8730#0 TCGCAGCACAAGAATGCTTGATACGCCATTTTTCTCGCCTTTATCATTGGGCGTTCTTTA 1646
consensus_8730#4 ------------------------------------------------------------
consensus_8730#2 ------------------------------------------------------------
consensus_8730#3 ------------------------------------------------------------
consensus_8730#1 ------------------------------------------------------------
consensus_8730#5 ------------------------------------------------------------
consensus_8730#0 CCGCTCGCTGGTGTCGAATTTATTAAACCCCATTGAAAAGACCCGAGAAAGAGCTTTATT 1706
consensus_8730#4 ------------------------------------------------------------
consensus_8730#2 ------------------------------------------------------------
consensus_8730#3 ------------------------------------------------------------
consensus_8730#1 ------------------------------------------------------------
consensus_8730#5 ------------------------------------------------------------
consensus_8730#0 GGGCGTTTCTTTTCCTTTTTGGTTTCGTTTGTTCAAAGAAGCTTTCGAGCTGTCTAGTTT 1766
consensus_8730#4 ------------------------------------------------------------
consensus_8730#2 ------------------------------------------------------------
consensus_8730#3 ------------------------------------------------------------
consensus_8730#1 ------------------------------------------------------------
consensus_8730#5 ------------------------------------------------------------
consensus_8730#0 CGGATTTGCTTATCCCATTTTCTGTCCGCTAGCAATGGAAAAGAGTTCTTATATAACGAA 1826
consensus_8730#4 ------------------------------------------------------------
consensus_8730#2 ------------------------------------------------------------
consensus_8730#3 ------------------------------------------------------------
consensus_8730#1 ------------------------------------------------------------
consensus_8730#5 ------------------------------------------------------------
consensus_8730#0 GATCAAACGATTTGAAGTAGTAAAGAAAAGTGAGAGAAAAAACATTAGAAAAAAGGGTTT 1886
consensus_8730#4 ------------------------------------------------------------
consensus_8730#2 ------------------------------------------------------------
consensus_8730#3 ------------------------------------------------------------
consensus_8730#1 ------------------------------------------------------------
consensus_8730#5 ------------------------------------------------------------
consensus_8730#0 TTACACTTAAACCAACAAAAAAAACAATGAAACGAGTAAACACAATCATGTTCTTTCTAT 1946
consensus_8730#4 ------------------------------------------------------------
consensus_8730#2 ------------------------------------------------------------
consensus_8730#3 ------------------------------------------------------------
consensus_8730#1 ------------------------------------------------------------
consensus_8730#5 ------------------------------------------------------------
consensus_8730#0 ACAATCGTACGTTTATACAAACACGCGCAGCTCACATACACATTTAGCCGGTATGTGGTG 2006
consensus_8730#4 ------------------------------------------------------------
consensus_8730#2 ------------------------------------------------------------
consensus_8730#3 ------------------------------------------------------------
consensus_8730#1 ------------------------------------------------------------
consensus_8730#5 ------------------------------------------------------------
consensus_8730#0 CTGCCTGTTTGGAGTTGTTCGGGAGAGCCGCTTATTTAAAAAAAATGGGATTTTGGACCA 2066
consensus_8730#4 ------------------------------------------------------------
consensus_8730#2 ------------------------------------------------------------
consensus_8730#3 ------------------------------------------------------------
consensus_8730#1 ------------------------------------------------------------
consensus_8730#5 ------------------------------------------------------------
consensus_8730#0 CGCAATCCCCCGGGGGATCTTTTTTTATATGACTTTTTTAACCGCAAACCACCACTGTTA 2126
consensus_8730#4 ------------------------------------------------------------
consensus_8730#2 ------------------------------------------------------------
consensus_8730#3 ------------------------------------------------------------
consensus_8730#1 ------------------------------------------------------------
consensus_8730#5 ------------------------------------------------------------
consensus_8730#0 TACACACATCCCTAAGAAAAACCGGGGCTTTGTGCT 2162
consensus_8730#4 ------------------------------------
consensus_8730#2 ------------------------------------
consensus_8730#3 ------------------------------------
consensus_8730#1 ------------------------------------
consensus_8730#5 ------------------------------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||