|
These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8759#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 2106 fasta sequence
[CCGCGATGCACTGCTAACCCGAGCAACGGAAGCGTTCGAAGTGCGCAACGAAAAGGAAGTGGCCGTCCAGGTAAATACACTGCGGCTCGAGCGCAGTGAGTCCATTACAGCGAAGGATGCCTACCGCTATCAATTGGAGACCGCACTGACCGAAGCTGACACCAATCTGCGCAAGCTGGAGGAAGCGATCGAAGCAATCAATGCGAACAACTTCATGTCGTCGACGCAGAACGTTTCCAAAGCGTCCGCTGCCTGCGAGTCCTCGATCGAGCTGATCAAGCATTTGAGCACACTGCTGCTTGCAGAATGTCACGCCACAGTGGAGGAAGCTTTCACTGTGCGTGTGAAGGAAGAAACGGAACGATATCATCG-TTTGTTGACCGTGTGGAAGGAGAAGCAAGAACAGCTGGAAGAATCAAGCAATGCGGACTACCTAACGTGTCCGCTGTGTACGAACCGCAACTGGCAGCAGATCGATAACGATCTGTGGCGCCTCGAGCAGTGGCTCGCAATGGCGGAATCGACGCAGCGCAATCAACTCTCCAGTCCTCCATCTGACATCGATGCGCTGGAGGACACAATACAGGACCACCGCGAGTTCCTGCTCGATCTCGACAGACACAAGAGCATCATCAAGTCGCTCAACATTGTGGGCGAACATCTGGCGACGCACACGCGCGATACCGATCGGGCGGCCAAGTTGCGCGAGCGGCTGCAGAAGAACAACCGCCGCTGGGATGCCGTCTGTACCGGGGCGTCCCGCTGGCAGTCAGCACTGAACAGTGCGCTGATGGAGAACCGCGAGTTCCATCGGACGATAGCGGAGCTGAGCGGATGGTTGGAGCAGACGGAGAACAAGATCAAGAGCTCGGAACCGATCGATCTGACCAGCGATCAGCGATTGGTGGAGAAGAAGTACCGCATGTTCCGGGAGCTGCGGGCGGATCTAATGCGTTGCGAGCCGCGAGTTGTGAGTTTGCAGGAGACGACCTCCCAGCTGACAAAGTACGTCGATGCGAACAAGTCGGAAAAGTTCGATGAAGTGTATGCAAAGCTGACTGATCTTCGGCTGCGCTTCCACTCGATCCGCCGCCTGGTGGAGATGTACATCATCAAGATAGGTGCCGCGTTGGGCTATGACAGCAGCACCAGCCTGGCCGAAATTCCTTCCTCCTCCTCGAACGCCTCGCTGGCGACCGTCGATCGGCAGCAGGCAAGACGCCGACAGGCATCCGAACAGCAGGAGAGCCACCAGCAAGATGGTAGCGGATCCCGAAACCATCCATCACAAGCGTCGGCACACGATTCCAGTACAAACATTGGCAGTGCAGAGGGCGACGACGATGTCATCAACACCACGATACTCACGCGAAGCTATCGATTCTTGGGCCGTGTCATACGTGCCTCGTTGCCCATCCAGGCGATGCTGTTATTGCTGCTCGGTGTGGTCACGCTCATGCCCCACGGTGAGGAGTACTCCTGCACCCTGGCCAACAACTTTGCCCGCAGCCTGGAACCGATGCTACGCTATCCGAACGGTCCACCACCGATCTAGCGACCTGCGAACGAGCGGGCCGCAACAACCACCACCACCACCACCA---CAATCCAACATCCACATCCCTTCCCTGACTCCATTCCTTGTGTTCCTTTTATAAAGCGCAAAATGAGGCAATTTTAGTGTGAGAGAGAGAAAATGGGAACAAATACTCCCAGCAGTGCCTGGATAGCTCTTCAAACATGGNAAAGAATGGCTATTTACACACTGTATGCTGTACAGCCTTTAGAAACACACCGTACATAAATATTGTATTGCCATTTTGTTTTTGCACATACATACATTAGCTAGATATAGATCGAATGGCGAATCGAAATCCAACGAAAAGCACGACGCAGTAGTACAACCGCGCGTGTAGCAAACCGAGAAGGGAATGCTCTTCTTCTTAATAGCTTTTAAGTACAGCCTTTAGGCTCGATATAACTTTGGTAAACAGAAGAGCTGCTGGCAACTAATCTACCCCCTCACTAACCTTTTAGATGTATTTAAGCATTTTTTGCATTGTTTTGTTTTCAGCGCTGAAGTGGCATTCTTATGACGGTTTTATTTTA]
[+] EMBL BM607709 [CCGCGATGCACTGCTAACCCGAGCAACGGAAGCGTTCGAAGTGCGCAACGAAAAGGAAGTGGCCGTCCAGGTAAATACACTGCGGCTCGAGCGCAGTGAGTCCATTACAGCGAAGGATGCCTACCGCTATCAATTGGAGACCGCACTGACCGAAGCTGACACCAATCTGCGCAAGCTGGAGGAAGCGATCGAAGCAATCAATGCGAACAACTTCATGTCGTCGACGCAGAACGTTTCCAAAGCGTCCGCTGCCTGCGAGTCCTCGATCGAGCTGATCAAGCATTTGAGCACACTGCTGCTTGCAGAATGTCACGCCACAGTGGAGGAAGCTTTCACTGTGCGTGTGAAGGAAGAAACGGAACGATATCATCG TTTGTTGACCGTGTGGAAGGAGAAGCAAGAACAGCTGGAAGAATCAAGCAATGCGGACTACCTAACGTGTCCGCTGTGTACGAACCGCAACTGGCAGCAGATCGATAACGATCTGTGGCGCCTCGAGCAGTGGCTCGCAATGGCGGAATCGACGCAGCGCAATCAACTCTCCAGTCCTCCATCTGACATCGATGCGCTGGAGGACACAATACAGGACCACCGCGAGTTCCTGCTCGATCTCGACAGACACAAGAGCATCATCAAGTCGCTCAACATTGTGGGCGAACATCTGGCGACGCACACGCGCGATACCGATCGGGCGGCCAAGTTGCGCGA ]
[+] EMBL BX620053 [ CATTTGAGCACACTGCTGCTTGCAGAATGTCACGCCACAGTGGAAGAAGCTTTCAGTGTGCGTGTGAAGGAAGAGACGGAGCGATATCATCGTTTTGTTGACCGTGTGGAAGGAGAAGCAAGAACAGCTGGAAGAATCAAGCAATGCGGACTACCTAACGTGTCCGCTGTGTACGAACCGCAACTGGCAGCAGATCGATAACGATCTGTGGCGCCTCGAGCAGTGGCTTGCAATGGCGGAATCGACGCAGCGCAATCAACTCTCCAGCCCTCCATCCGACATCGATGCGCTGGAGGACACGATACAGGACCACCGTGAGTTCCTGCTCGATCTCGACAGCCACAAGAGCATCATCAAGTCGCTCAAAATTGTGGGCGAACATCTGGCGACGCACACGCGCGATACCGATCGGGCGGCCAAGTTGCGCGAGCGGCTGCAGAAGAACAACCGCCGCTGGGATGCCGTCTGTACCGGGGCGTCCCGCTGGCAGTCAGCACTGAACAGTGCGCTGATGGAGAACCGCGAGTTCCATCGGACGATAGCGGAGCTGAGCGGATGGTTGGAGCAGACGGAGAACAAGATCAAGAGCTCGGAACCGATCGATCTGACCAGCGATCAGCGATTGGTGGAGAAGAAGTACCGCATGTTCCGGGAGCTGCGGGCGGATCTGATGCGTTGCGAGCCGCGAGTTGTGAGTTTGCAGGAGACGAACTNCCAGCTGACAAAGTACGTCGATGCGAACAAGTCNG AAAGTTCGATGAAGTGTATGCNAAGCTGACTGA ]
[+] EMBL BX629275 [ GCTGCGGGCGGATCTAATGCGTTGCGAGCCGCGAGTTGTGAGTTTGCAGGAGACGACCTCCCAGCTGACAAAGTACGTCGATGCGAACAAGTCGGAAAAGTTCGATGAAGTGTATGCAAAGCTGACTGATCTTCGGCTGCGCTTCCACTCGATCCGCCGCCTGGTGGAGATGTACATCATCAAGATAGGTGCCGCGTTGGGCTATGACAGCAGCACCAGCCTGGCCGAAATTCCTTCCTCCTCCTCGAACGCCTCGCTGGCGACCGTCGATCGGCAGCAGGCAAGACGCCGACAGGCATCCGAACAGCAGGAGAGCCACCAGCAAGATGGTAGCGGATCCCGAAACCATCCATCACAAGCGTCGGCACACGATTCCAGTACAAACATTGGCAGTGCAGAGGGCGACGACGATGTCATCAACACCACGATACTCACGCGAAGCTATCGATTCTTGGGCCGTGTCATACGTGCCTCGTTGCCCATCCAGGCGATGCTGTTATTGCTGCTCGGTGTGGTCACGCTCATGCCCCACGGTGAGGAGTACTCCTGCACCCTGGCCAACAACTTTGCCCGCAGCCTGGAACCGATGCTACGCTATCCGAACGGTCCACCACCGATCTAGCGACCTGCGAACGAGCGGGCCGCAACAACCACCACCACCACCACCA CAATCCAACATCCACATCCCTTCCCTGACTCCATTCCTTGTGTTCCTTTTATAAAGCGCAAAATGAGGCAATTTTAGTGTGAGAGAGAGAAAATGGGAACNAATACTCCCAGCAGTGCCTGGATAGCTCTTC AACATGGNAAAGAATGGCTATTTACACACTGTATGCTGT ]
[+] EMBL BX629168 [ CGGGCGGATCTAATGCGTTGCGAGCCGCGAGTTGTGAGTTTGCAGGAGACGACCTCCCAGCTGACAAAGTACGTCGATGCGAACAAGTCGGAAAAGTTCGATGAAGTGTATGCAAAGCTGACTGATCTTCGGCTGCGCTTCCACTCGATCCGCCGCCTGGTGGAGATGTACATCATCAAGATAGGTGCCGCGTTGGGCTATGACAGCAGCACCAGCCTGGCCGAAATTCCTTCCTCCTCCTCGAACGCCTCGCTGGCGACCGTCGATCGGCAGCAGGCAAGACGCCGACAGGCATCCGAACAGCAGGAGAGCCACCAGCAAGATGGTAGCGGATCCCGAAACCATCCATCACAAGCGTCGGCACACGATTCCAGTACAAACATTGGCAGTGCAGAGGGCGACGACGATGTCATCAACACCACGATACTCACGCGAAGCTATCGATTCTTGGGCCGTGTCATACGTGCCTCGTTGCCCATCCAGGCGATGCTGTTATTGCTGCTCGGTGTGGTCACGCTCATGCCCCACGGTGAGGAGTACTCCTGCACCCTGGCCAACAACTTTGCCCGCAGCCTGGAACCGATGCTACGCTATCCGAACGGTCCACCACCGATCTAGCGACCTGCGAACGAGCGGGCCGCAACAACCACCACCACCACCACCA CAATCCAACATCCACATCCCTTCCCTGACTCCATTCCTTGTGTTCCTTTTATAAAGCGCAAAATGAGGCAATTTTAGTGTGAGAGAGAGAAAATGGGAACNAATACTCCCAGCAGTGCCTGGATAGCTCTTC AACATGGNAAAGAATGGCTATTTACACACTGTATG ]
[+] EMBL BX617586 [ TTCGGCTGCGCTTCCACTCGATCCGCCGCCTGGTGGAGATGTACATCATCAAGATAGGTGCCGCGTTGGGCTATGACAGCAGCACCAGCCTGGCCGAAATTCCTTCCTCCTCCTCGAACGCCTCGCTGGCGACCGTCGATCGGCAGCAGGCAAGACGCCGACAGGCATCCGAACAGCAGGAGAGCCACCAGCAAGATGGTAGCGGATCCCGAAACCATCCATCACAAGCGTCGGCACACGATTCCAGTACAAACATTGGCAGTGCAGAGGGCGACGACGATGTCATCAACACCACGATACTCACGCGAAGCTATCGATTCTTGGGCCGTGTCATACGTGCCTCGTTGCCCATCCAGGCGATGCTGTTATTGCTGCTCGGTGTGGTCACGCTCATGCCCCACGGTGAGGAGTACTCCTGCACCCTGGCCAACAACTTTGCCCGCAGCCTGGAACCGATGCTACGCTATCCGAACGGTCCACCACCGATCTAGCGACCTGCGAACGAGCGGGCCGCAACATCCACCAC CC CAATCCAACATCCACATCCCTTCCCTGACTCCATTCCTTGTGTTCCTTTTATAAAGCGCAAAATGAGGCAATTTTAGTGTGAGAGAGAG AAATGGGGACAAATACTCCCAGCAGTGCCTGGATAGCTCTTCAAACATGGGAAAGAATGGCTATTTACACACTGTATGCTGTA ]
[+] EMBL BX620540 [ ATACTCACGCGAAGCTATCGATTCTTGGGCCGTGTCATACGTGCCTCGTTGCCCATCCAGGCGATGCTGTTATTGCTGCTCGGTGTGGTCACGCTCATGCCCCACGGTGAGGAGTACTCCTGCACCCTGGCCAACAACTTTGCCCGCAGCCTGGAACCGATGCTACGCTATCCGAACGGTCCACCACCGATCTAGCGACCTGCGAACGAGCGGGCCGCAACAACCACCACCACCACCACCACCCCAATCCAACATCCACATCCCTTCCCTGACTCCATTCCTTGTGTTCCTTTTATAAAGCGCAAAATGAGGCAATTTTAGTGTGAGAGAGAGAAAATGGGAACAAATACTCCCAGCAGTGCCTGGATAGCTCTTCAAACATGG AAAGAATGGCTATTTACACACTGTATGCTGTACAGCCTTTAGAAACACACCGTACATAAATATTGTATTGCCATTTTGTTTTTGCACATACATACATTAGCTAGATATAGATCGAATGGCGAATCGAAATCCAACGAAAAGCACGACGCAGTAGTACAACCGCGCGTGTAGCAAACCGAGAAGGGAATGCTCTTCTTCTTAATAGCTTTTAAGTACAGCCTTTAGGCTCGATATAACTTTGGTAAACAGAAGAGCTGCTGGCAACTAATCTACCCCCTCACTAACCTTTT ]
[+] EMBL BM637126 [ ccGCCCCACGGTGAGGAGTACTCCTGCACCCTGGCCAACAACTTTGCCCGCAGCCTGGAACCGATGCTACGCTATCCGAACGGTCCACCACCGATCTAGCGACCTGCGAACGAGCGGGCCGCAACAACCACCACCACCACCACCACCCCAATCCAACATCCACATCCCTTCCCTGACTCCATTCCTTGTGTTCCTTTTATAAAGCGCAAAATGAGGCAATTTTAGTGTGAGAGAGAGAAAATGGGAACAAATACTCCCAGCAGTGCCTGGATAGCTCTTCAAACATGG AAAGAATGGCTATTTACACACTGTATGCTGTACAGCCTTTAGAAACACACCGTACATAAATATTGTATTGCCATTTTGTTTTTGCACATACATACATTAGCTAGATATAGATCGAATGGCGAATCGAAATCCAACGAAAAGCACGACGCAGTAGTACAACCGCGCGTGTAGCAAACCGAGAAGGGAATGCTCTTCTTCTTAATAGCTTTTAAGTACAGCCTTTAGGCTCGATATAACTTTGGTAAACAGAAGAGCTGCTGGCAACTAATCTACCCCCTCACTAACCTTTTAGATGTATTTAAGCATTTTTTGCATTGTTTTGTTTTCAGCGCTGAAGTGGCATTCTTATGACGGTTTTATTTTA]
consensusID : consensus_8759#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 707 fasta sequence
[CCGGAAGAAGTACCGCATGTTCCGGGAGCTGCGGGCGGATCTGATGCGTTGCGAGCCGCGAGTTGTGAGTTTGCAGGAGACGACCTCCCAGCTGACAAAGTACGTCGATGCGAACAAGTCGGAAAAGTTCGATGAAGTGTATGCAAAGCTGACTGATCTTCGGCTGCGCTTCCACTCGATCCGCCGCCTGGTGGAGATGTACATCATCAAGATAGGTGCCGCGTTGGGCTATGACAGCAGCACCAGCCTGGCCGAAATTCCTTCCTCCTCCTCGAACGCCTCGCTGGCGACCGTCGATCGGCAGCAGGCAAGACGCCGACAGGCATCCGAACAGCAGGAGGTAGGTGCAAGCGAGGACGCATCTAGATGTGTCATTCTTTGAGGAATATATCTTGCCACCACCACCACCACCACCACCAATACCACCAAAACACCACCAAAAACCTATCCAACCTCTTATTATACCATCACCAACTATTCATCGCACACCGCCAACGAAGCTTTTGCTGTTGTCTTCGTCGTCGTCGTCGTCGACATCGTTACCACCAGTCGCGGGCTTACTGCGGCGGCGGTCTCAGTTTTGTTTGTTGCACACAGTCTGTTTGTCTAGCCACCAGCAAGATGGTAGCGGATCCCGAAACCATCCATCACAAGCGTCGGCACACGATTCCAGTACAAACATTGGCAGTGCAGAGGGCGACGACGAT]
[+] EMBL BM624887 [CCGGAAGAAGTACCGCATGTTCCGGGAGCTGCGGGCGGATCTGATGCGTTGCGAGCCGCGAGTTGTGAGTTTGCAGGAGACGACCTCCCAGCTGACAAAGTACGTCGATGCGAACAAGTCGGAAAAGTTCGATGAAGTGTATGCAAAGCTGACTGATCTTCGGCTGCGCTTCCACTCGATCCGCCGCCTGGTGGAGATGTACATCATCAAGATAGGTGCCGCGTTGGGCTATGACAGCAGCACCAGCCTGGCCGAAATTCCTTCCTCCTCCTCGAACGCCTCGCTGGCGACCGTCGATCGGCAGCAGGCAAGACGCCGACAGGCATCCGAACAGCAGGAGGTAGGTGCAAGCGAGGACGCATCTAGATGTGTCATTCTTTGAGGAATATATCTTGCCACCACCACCACCACCACCACCAATACCACCAAAACACCACCAAAAACCTATCCAACCTCTTATTATACCATCACCAACTATTCATCGCACACCGCCAACGAAGCTTTTGCTGTTGTCTTCGTCGTCGTCGTCGTCGACATCGTTACCACCAGTCGCGGGCTTACTGCGGCGGCGGTCTCAGTTTTGTTTGTTGCACACAGTCTGTTTGTCTAGCCACCAGCAAGATGGTAGCGGATCCCGAAACCATCCATCACAAGCGTCGGCACACGATTCCAGTACAAACATTGGCAGTGCAGAGGGCGACGACGAT]
consensusID : consensus_8759#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 664 fasta sequence
[CCGGACACGCTCGGTGCGGGCCTAATCGAACGACACGCCAACAATAACACCATGACGGAGGACATTCGACAGAAGATGGCTGAATATCACGAGCTGGGCAATAGCGTCAAGACGCGCCTCGATGCACTGCTAACCCGAGCAACGGAAGCGTTCGAAGTACGCAACGAAAAGGAAGTGGCGGTCCAGGTAAATACACTGCGGCTCGAGCGCAGTGAGTCCATTACAGCGAAGGATGCCTACCGCTATCAATTGGAGACCGCACTGACCGAAGCTGACACCAATCTGCGCAAGCTGGAGGAAGCGATCGAAGCAATCAATGCAAACAACTTCATGTCGTCGACGCAGAACGTTTCCAAAGCGTCCGCTGCCTGCGAGTCCTCGATCGAGCTGATCAAGCATTTGAGCACACTGCTGCTTGCAGAATGTCACGCCACAGTGGAGGAAGCTTTCAGTGTGCGTGTGAAGGAAGAAACGGAACGATATCATCGTTTGTTGACCGTGTGGAAGGAGAAGCAAGAACAGATGGAAGAATCAAGGATCATTCCTAATGCTTACAATTTTAACTGCGTACACAATGCGGACTACCTAACGTGTCCGCTGTGTACGAACCGCAACTGGCAGCAGATCGATAACGATCTGTGGCGCCTCGAGCAGTGGCTCGCAA]
[+] EMBL BM634893 [CCGGACACGCTCGGTGCGGGCCTAATCGAACGACACGCCAACAATAACACCATGACGGAGGACATTCGACAGAAGATGGCTGAATATCACGAGCTGGGCAATAGCGTCAAGACGCGCCTCGATGCACTGCTAACCCGAGCAACGGAAGCGTTCGAAGTACGCAACGAAAAGGAAGTGGCGGTCCAGGTAAATACACTGCGGCTCGAGCGCAGTGAGTCCATTACAGCGAAGGATGCCTACCGCTATCAATTGGAGACCGCACTGACCGAAGCTGACACCAATCTGCGCAAGCTGGAGGAAGCGATCGAAGCAATCAATGCAAACAACTTCATGTCGTCGACGCAGAACGTTTCCAAAGCGTCCGCTGCCTGCGAGTCCTCGATCGAGCTGATCAAGCATTTGAGCACACTGCTGCTTGCAGAATGTCACGCCACAGTGGAGGAAGCTTTCAGTGTGCGTGTGAAGGAAGAAACGGAACGATATCATCGTTTGTTGACCGTGTGGAAGGAGAAGCAAGAACAGATGGAAGAATCAAGGATCATTCCTAATGCTTACAATTTTAACTGCGTACACAATGCGGACTACCTAACGTGTCCGCTGTGTACGAACCGCAACTGGCAGCAGATCGATAACGATCTGTGGCGCCTCGAGCAGTGGCTCGCAA]
consensusID : consensus_8759#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 597 fasta sequence
[CGCGAGTTGTGAGTNTGCAGGAGACGACCTCCCAGCTGACAAAGTACGTCGATGCGAACAAGTCGGAANNAGTTCGATGAAGTGTATGCAAAGCTGACTGATCTTCGGCTGCGCTTCCACTCGATCCGCCGCCTGGTGGAGATGTACATCATCAAGATAGGTGCCGCGTTGGGCTATGACAGCAGCACCAGCCTGGCCGAAATTCCTTCCTCCTCCTCGAACGCCTCGCTGGCGACCGTCGATCGGCAGCAGGCAAGACGCCGACAGGCATCCGAACCAGCAGGAGAGCCACCCAGCAAGATGGTAGCGGATNCCGANNACCCATCCCATCCACCAAGGCGTTNNGCCACCACGAAATTTCCCNGTAACCAANNCANTNNGGGCANGTGGCCAGANNGGGCCGACCGACGAATGGTCATCANCCCCCCACGATANTCNCGCANGCCTNTCGNATTCTTNGGGCGTGTCTCCGTGCCTGTTNCCCNTCCNGCGATGCTGTNNTTGCTGCTNGGNTGTGGTNNNCGCTTCATGGCCCCCCCGGGTGAAGGGAAGTTTCCTCCCTGGCAACCCCTTGGGCCAAAACCCAAAATTTTGGGC]
[+] EMBL BX619245 [CGCGAGTTGTGAGTNTGCAGGAGACGACCTCCCAGCTGACAAAGTACGTCGATGCGAACAAGTCGGAANNAGTTCGATGAAGTGTATGCAAAGCTGACTGATCTTCGGCTGCGCTTCCACTCGATCCGCCGCCTGGTGGAGATGTACATCATCAAGATAGGTGCCGCGTTGGGCTATGACAGCAGCACCAGCCTGGCCGAAATTCCTTCCTCCTCCTCGAACGCCTCGCTGGCGACCGTCGATCGGCAGCAGGCAAGACGCCGACAGGCATCCGAACCAGCAGGAGAGCCACCCAGCAAGATGGTAGCGGATNCCGANNACCCATCCCATCCACCAAGGCGTTNNGCCACCACGAAATTTCCCNGTAACCAANNCANTNNGGGCANGTGGCCAGANNGGGCCGACCGACGAATGGTCATCANCCCCCCACGATANTCNCGCANGCCTNTCGNATTCTTNGGGCGTGTCTCCGTGCCTGTTNCCCNTCCNGCGATGCTGTNNTTGCTGCTNGGNTGTGGTNNNCGCTTCATGGCCCCCCCGGGTGAAGGGAAGTTTCCTCCCTGGCAACCCCTTGGGCCAAAACCCAAAATTTTGGGC]
consensusID : consensus_8759#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 279 fasta sequence
[CTCTAAAAGCTCGGAATTCCTCGAGCACTGTTGGCCTACTGGATAGATCGAATGGCGAATCGAAATCCAACGAAAAGCACGACGCAGTAGTACAACCGCGCGTGTAGCAAACCGAGAAGGGAATGCTCTTCTTCTTAATAGCTTTTAAGTACAGCCTTTAAGCTCGATATAACTTTGGTAAACAGAAGAGCTGCTGGCAACTAATCTACCCCCTCACTAACCTTTTAGATGTATTTAAGCATCTTTTGCATTGTTTTGTTTTCAGCGCTGAGGTGGCAT]
[-] EMBL CNS08U30 [CTCTAAAAGCTCGGAATTCCTCGAGCACTGTTGGCCTACTGGATAGATCGAATGGCGAATCGAAATCCAACGAAAAGCACGACGCAGTAGTACAACCGCGCGTGTAGCAAACCGAGAAGGGAATGCTCTTCTTCTTAATAGCTTTTAAGTACAGCCTTTAAGCTCGATATAACTTTGGTAAACAGAAGAGCTGCTGGCAACTAATCTACCCCCTCACTAACCTTTTAGATGTATTTAAGCATCTTTTGCATTGTTTTGTTTTCAGCGCTGAGGTGGCAT]
consensusID : consensus_8759#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 223 fasta sequence
[CCGCCCACGCGTCCGCAACTCTCCAGTCCTCCATCTGACATCTATGCGCTGGAGGACACAATACAGGACCACCGCGAGTTCCTGCTCGATCTCGACAGCCACAAGAGCATCATCAAGTCGCTCAACATTGTGGGCGAACATCTGGCGACGCACACGCGCGATACCGATCGGGCGGCCAAGTTGCGCGAGCGGCTGCAGAAGAACAACCGCCGCTGGGATGCCG]
[+] EMBL BM655763 [CCGCCCACGCGTCCGCAACTCTCCAGTCCTCCATCTGACATCTATGCGCTGGAGGACACAATACAGGACCACCGCGAGTTCCTGCTCGATCTCGACAGCCACAAGAGCATCATCAAGTCGCTCAACATTGTGGGCGAACATCTGGCGACGCACACGCGCGATACCGATCGGGCGGCCAAGTTGCGCGAGCGGCTGCAGAAGAACAACCGCCGCTGGGATGCCG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_8759#0 CCGCGATGCACTGCTAACCCGAGCAACGGAAGCGTTCGAAGTGCGCAACGAAAAGGAAGT 60
consensus_8759#4 ------------------------------------------------------------
consensus_8759#2 ------------------------------------------------------------
consensus_8759#5 ------------------------------------------------------------
consensus_8759#1 ------------------------------------------------------------
consensus_8759#3 ------------------------------------------------------------
consensus_8759#0 GGCCGTCCAGGTAAATACACTGCGGCTCGAGCGCAGTGAGTCCATTACAGCGAAGGATGC 120
consensus_8759#4 ------------------------------------------------------------
consensus_8759#2 ------------------------------------------------------------
consensus_8759#5 ------------------------------------------------------------
consensus_8759#1 ------------------------------------------------------------
consensus_8759#3 ------------------------------------------------------------
consensus_8759#0 CTACCGCTATCAATTGGAGACCGCACTGACCGAAGCTGACACCAATCTGCGCAAGCTGGA 180
consensus_8759#4 ------------------------------------------------------------
consensus_8759#2 ------------------------------------------------------------
consensus_8759#5 ------------------------------------------------------------
consensus_8759#1 ------------------------------------------------------------
consensus_8759#3 ------------------------------------------------------------
consensus_8759#0 GGAAGCGATCGAAGCAATCAATGCGAACAACTTCATGTCGTCGACGCAGAACGTTTCCAA 240
consensus_8759#4 ------------------------------------------------------------
consensus_8759#2 ------------------------------------------------------------
consensus_8759#5 ------------------------------------------------------------
consensus_8759#1 ------------------------------------------------------------
consensus_8759#3 ------------------------------------------------------------
consensus_8759#0 AGCGTCCGCTGCCTGCGAGTCCTCGATCGAGCTGATCAAGCATTTGAGCACACTGCTGCT 300
consensus_8759#4 ------------------------------------------------------------
consensus_8759#2 ------------------------------------------------------------
consensus_8759#5 ------------------------------------------------------------
consensus_8759#1 ------------------------------------------------------------
consensus_8759#3 ------------------------------------------------------------
consensus_8759#0 TGCAGAATGTCACGCCACAGTGGAGGAAGCTTTCACTGTGCGTGTGAAGGAAGAAACGGA 360
consensus_8759#4 ------------------------------------------------------------
consensus_8759#2 ------------------------------------------------------------
consensus_8759#5 ------------------------------------------------------------
consensus_8759#1 ------------------------------------------------------------
consensus_8759#3 ------------------------------------------------------------
consensus_8759#0 ACGATATCATCGTTTGTTGACCGTGTGGAAGGAGAAGCAAGAACAGCTGGAAGAATCAAG 420
consensus_8759#4 ------------------------------------------------------------
consensus_8759#2 ------------------------------------------------------------
consensus_8759#5 ------------------------------------------------------------
consensus_8759#1 ------------------------------------------------------------
consensus_8759#3 ------------------------------------------------------------
consensus_8759#0 CAATGCGGACTACCTAACGTGTCCGCTGTGTACGAACCGCAACTGGCAGCAGATCGATAA 480
consensus_8759#4 ------------------------------------------------------------
consensus_8759#2 ------------------------------------------------------------
consensus_8759#5 ------------------------------------------------------------
consensus_8759#1 ------------------------------------------------------------
consensus_8759#3 ------------------------------------------------------------
consensus_8759#0 CGATCTGTGGCGCCTCGAGCAGTGGCTCGCAATGGCGGAATCGACGCAGCGCAATCAACT 540
consensus_8759#4 ------------------------------------------------------------
consensus_8759#2 ------------------------------------------------------------
consensus_8759#5 ------------------------------------------------------------
consensus_8759#1 ------------------------------------------------------------
consensus_8759#3 ------------------------------------------------------------
consensus_8759#0 CTCCAGTCCTCCATCTGACATCGATGCGCTGGAGGACACAATACAGGACCACCGCGAGTT 600
consensus_8759#4 ------------------------------------------------------------
consensus_8759#2 ------------------------------------------------------------
consensus_8759#5 ------------------------------------------------------------
consensus_8759#1 ------------------------------------------------------------
consensus_8759#3 ------------------------------------------------------------
consensus_8759#0 CCTGCTCGATCTCGACAGACACAAGAGCATCATCAAGTCGCTCAACATTGTGGGCGAACA 660
consensus_8759#4 ------------------------------------------------------------
consensus_8759#2 ------------------------------------------------------------
consensus_8759#5 ------------------------------------------------------------
consensus_8759#1 ------------------------------------------------------------
consensus_8759#3 ------------------------------------------------------------
consensus_8759#0 TCTGGCGACGCACACGCGCGATACCGATCGGGCGGCCAAGTTGCGCGAGCGGCTGCAGAA 720
consensus_8759#4 ------------------------------------------------------------
consensus_8759#2 ------------------------------------------------------------
consensus_8759#5 ------------------------------------------------------------
consensus_8759#1 ------------------------------------------------------------
consensus_8759#3 ------------------------------------------------------------
consensus_8759#0 GAACAACCGCCGCTGGGATGCCGTCTGTACCGGGGCGTCCCGCTGGCAGTCAGCACTGAA 780
consensus_8759#4 ------------------------------------------------------------
consensus_8759#2 ------------------------------------------------------------
consensus_8759#5 ------------------------------------------------------------
consensus_8759#1 ------------------------------------------------------------
consensus_8759#3 ------------------------------------------------------------
consensus_8759#0 CAGTGCGCTGATGGAGAACCGCGAGTTCCATCGGACGATAGCGGAGCTGAGCGGATGGTT 840
consensus_8759#4 ------------------------------------------------------------
consensus_8759#2 ------------------------------------------------------------
consensus_8759#5 ------------------------------------------------------------
consensus_8759#1 ------------------------------------------------------------
consensus_8759#3 ------------------------------------------------------------
consensus_8759#0 GGAGCAGACGGAGAACAAGATCAAGAGCTCGGAACCGATCGATCTGACCAGCGATCAGCG 900
consensus_8759#4 ------------------------------------------------------------
consensus_8759#2 ------------------------------------------------------------
consensus_8759#5 ------------------------------------------------------------
consensus_8759#1 ------------------------------------------------------------
consensus_8759#3 ------------------------------------------------------------
consensus_8759#0 ATTGGTGGAGAAGAAGTACCGCATGTTCCGGGAGCTGCGGGCGGATCTAATGCGTTGCGA 960
consensus_8759#4 ------------------------------------------------------------
consensus_8759#2 ------------------------------------------------------------
consensus_8759#5 ------------------------------------------------------------
consensus_8759#1 ------------------------------------------------------------
consensus_8759#3 ------------------------------------------------------------
consensus_8759#0 GCCGCGAGTTGTGAGTTTGCAGGAGACGACCTCCCAGCTGACAAAGTACGTCGATGCGAA 1020
consensus_8759#4 ------------------------------------------------------------
consensus_8759#2 ------------------------------------------------------------
consensus_8759#5 ------------------------------------------------------------
consensus_8759#1 ------------------------------------------------------------
consensus_8759#3 ------------------------------------------------------------
consensus_8759#0 CAAGTCGGAAAAGTTCGATGAAGTGTATGCAAAGCTGACTGATCTTCGGCTGCGCTTCCA 1080
consensus_8759#4 ------------------------------------------------------------
consensus_8759#2 ------------------------------------------------------------
consensus_8759#5 ------------------------------------------------------------
consensus_8759#1 ------------------------------------------------------------
consensus_8759#3 ------------------------------------------------------------
consensus_8759#0 CTCGATCCGCCGCCTGGTGGAGATGTACATCATCAAGATAGGTGCCGCGTTGGGCTATGA 1140
consensus_8759#4 ------------------------------------------------------------
consensus_8759#2 ------------------------------------------------------------
consensus_8759#5 ------------------------------------------------------------
consensus_8759#1 ------------------------------------------------------------
consensus_8759#3 ------------------------------------------------------------
consensus_8759#0 CAGCAGCACCAGCCTGGCCGAAATTCCTTCCTCCTCCTCGAACGCCTCGCTGGCGACCGT 1200
consensus_8759#4 ------------------------------------------------------------
consensus_8759#2 ------------------------------------------------------------
consensus_8759#5 ------------------------------------------------------------
consensus_8759#1 ------------------------------------------------------------
consensus_8759#3 ------------------------------------------------------------
consensus_8759#0 CGATCGGCAGCAGGCAAGACGCCGACAGGCATCCGAACAGCAGGAGAGCCACCAGCAAGA 1260
consensus_8759#4 ------------------------------------------------------------
consensus_8759#2 ------------------------------------------------------------
consensus_8759#5 ------------------------------------------------------------
consensus_8759#1 ------------------------------------------------------------
consensus_8759#3 ------------------------------------------------------------
consensus_8759#0 TGGTAGCGGATCCCGAAACCATCCATCACAAGCGTCGGCACACGATTCCAGTACAAACAT 1320
consensus_8759#4 ------------------------------------------------------------
consensus_8759#2 ------------------------------------------------------------
consensus_8759#5 ------------------------------------------------------------
consensus_8759#1 ------------------------------------------------------------
consensus_8759#3 ------------------------------------------------------------
consensus_8759#0 TGGCAGTGCAGAGGGCGACGACGATGTCATCAACACCACGATACTCACGCGAAGCTATCG 1380
consensus_8759#4 ------------------------------------------------------------
consensus_8759#2 ------------------------------------------------------------
consensus_8759#5 ------------------------------------------------------------
consensus_8759#1 ------------------------------------------------------------
consensus_8759#3 ------------------------------------------------------------
consensus_8759#0 ATTCTTGGGCCGTGTCATACGTGCCTCGTTGCCCATCCAGGCGATGCTGTTATTGCTGCT 1440
consensus_8759#4 ------------------------------------------------------------
consensus_8759#2 ------------------------------------------------------------
consensus_8759#5 ------------------------------------------------------------
consensus_8759#1 ------------------------------------------------------------
consensus_8759#3 ------------------------------------------------------------
consensus_8759#0 CGGTGTGGTCACGCTCATGCCCCACGGTGAGGAGTACTCCTGCACCCTGGCCAACAACTT 1500
consensus_8759#4 ------------------------------------------------------------
consensus_8759#2 ------------------------------------------------------------
consensus_8759#5 ------------------------------------------------------------
consensus_8759#1 ------------------------------------------------------------
consensus_8759#3 ------------------------------------------------------------
consensus_8759#0 TGCCCGCAGCCTGGAACCGATGCTACGCTATCCGAACGGTCCACCACCGATCTAGCGACC 1560
consensus_8759#4 ------------------------------------------------------------
consensus_8759#2 ------------------------------------------------------------
consensus_8759#5 ------------------------------------------------------------
consensus_8759#1 ------------------------------------------------------------
consensus_8759#3 ------------------------------------------------------------
consensus_8759#0 TGCGAACGAGCGGGCCGCAACAACCACCACCACCACCACCACAATCCAACATCCACATCC 1620
consensus_8759#4 ------------------------------------------------------------
consensus_8759#2 ------------------------------------------------------------
consensus_8759#5 ------------------------------------------------------------
consensus_8759#1 ------------------------------------------------------------
consensus_8759#3 ------------------------------------------------------------
consensus_8759#0 CTTCCCTGACTCCATTCCTTGTGTTCCTTTTATAAAGCGCAAAATGAGGCAATTTTAGTG 1680
consensus_8759#4 ------------------------------------------------------------
consensus_8759#2 ------------------------------------------------------------
consensus_8759#5 ------------------------------------------------------------
consensus_8759#1 ------------------------------------------------------------
consensus_8759#3 ------------------------------------------------------------
consensus_8759#0 TGAGAGAGAGAAAATGGGAACAAATACTCCCAGCAGTGCCTGGATAGCTCTTCAAACATG 1740
consensus_8759#4 ------------------------------------------------------------
consensus_8759#2 -------------------------------------------CCGGACACGCTCGGTGC 17
consensus_8759#5 ------------------------------------------------------------
consensus_8759#1 ---CCGGAAGAAGTACCGCATGTTCCGGGAGCTGCGGGCGGATCTGATGCGTTGCGAGCC 57
consensus_8759#3 -----------------------------------------------------------C 1
consensus_8759#0 GNAAAGAATGGCTATTTACACACTGTATGCTGTACAGCCTTTAGAAACACACCGTACATA 1800
consensus_8759#4 ------------------------------------------------------------
consensus_8759#2 GGGCCTAATCGAACGACACGCCAACAATAACACCATGACGGAGGACATTCGACAGAAGAT 77
consensus_8759#5 ------------------------------------------------------------
consensus_8759#1 GCGAGTTGTGAGTTTGCAGGAGACGACCTCCCAGCTGACAAAGTACGTCGATGCGAACAA 117
consensus_8759#3 GCGAGTTGTGAGTNTGCAGGAGACGACCTCCCAGCTGACAAAGTACGTCGATGCGAACAA 61
consensus_8759#0 AATATTGTA-TTGCCATTTTGTTTTT--GCACATA-CATACATTAGCTAGAT--ATAGAT 1854
consensus_8759#4 -------CT-CTAAAAGCTCGGAATT--CCTCGAG-CAC-TGTTGGCCTACTGGATAGAT 48
consensus_8759#2 GGCTGAATA-TCACGAGCTGGGCAATAGCGTCAAGACGCGCCTCGATGCACTG-CTAACC 135
consensus_8759#5 -------------------------------------------------------CCGCC 5
consensus_8759#1 GTCGGAAAA-GTTCGATGAAGTGTATGCAAAGCTGACTGATCTTCGGCTGCGCTTCCACT 176
consensus_8759#3 GTCGGAANNAGTTCGATGAAGTGTATGCAAAGCTGACTGATCTTCGGCTGCGCTTCCACT 121
consensus_8759#0 CGAATGGCGAA-----TCGAAATCC--AACGAAAAGCACGACGCAGT-------AGT-AC 1899
consensus_8759#4 CGAATGGCGAA-----TCGAAATCC--AACGAAAAGCACGACGCAGT-------AGT-AC 93
consensus_8759#2 CGAGCAACGGAAGCGTTCGAAGTACGCAACGAAAAGGAAGTGGCGGTCCAGGTAAAT-AC 194
consensus_8759#5 CACGCGTCCGCAACTCTCCAGTCCTCCATCTGACATCTATGCGCTGG-----AGGAC-AC 59
consensus_8759#1 CGATCCGCCGCC-TGGTGGAGATGTACATCATCAAGATAGGTGCCGCGTTGGGCTATGAC 235
consensus_8759#3 CGATCCGCCGCC-TGGTGGAGATGTACATCATCAAGATAGGTGCCGCGTTGGGCTATGAC 180
* * * * * * * ** * **
consensus_8759#0 AAC----CGCGCGTGTAGCAAACCGA--GAAGGGAATGCT-CTTCTTCTTAATAGCTTTT 1952
consensus_8759#4 AAC----CGCGCGTGTAGCAAACCGA--GAAGGGAATGCT-CTTCTTCTTAATAGCTTTT 146
consensus_8759#2 ACTGCGGCTCGAGCGCAGTGAGTCCATTACAGCGAAGGATGCCTACCGCTATCAATTGGA 254
consensus_8759#5 AATA---CAGGACCACCGCGAGTTCC-------------TGCTCGATCTCGACAGCCAC- 102
consensus_8759#1 AGCAGCACCAGCCTGGCCGAAATTCCTTCCTCCTCCTCGAACGCCTCGCTGGCGACCGTC 295
consensus_8759#3 AGCAGCACCAGCCTGGCCGAAATTCCTTCCTCCTCCTCGAACGCCTCGCTGGCGACCGTC 240
* * * * *
consensus_8759#0 AAGTA-CAGCCTTTAGG--CTCGATATAACTTTG-GTAAACAGAAG--AGCT--GCTG-- 2002
consensus_8759#4 AAGTA-CAGCCTTTAAG--CTCGATATAACTTTG-GTAAACAGAAG--AGCT--GCTG-- 196
consensus_8759#2 GACCG-CACTGACCGAA--GCTGACACCAATCTGCGCAAGCTGGAGGAAGCG--ATCGAA 309
consensus_8759#5 AAGAG-CA-TCATCAAG--TCGCTCAACATTGTGGGCGAACATCTGGCGACG--CACAC- 155
consensus_8759#1 GATCGGCAGCAGGCAAGACGCCGACAGGCATCCGAAC-AGCAGGAGGTAGGT---GCAAG 351
consensus_8759#3 GATCGGCAGCAGGCAAGACGCCGACAGGCATCCGAACCAGCAGGAGAGCCACCCAGCAAG 300
* ** * * * * * *
consensus_8759#0 ---GCAACTAATCTACCCCCTCACTAACCTTTTA-----GATGTATTTAA-GCATT-TTT 2052
consensus_8759#4 ---GCAACTAATCTACCCCCTCACTAACCTTTTA-----GATGTATTTAA-GCATC-TTT 246
consensus_8759#2 ---GCAATCAATGCAAACAACTTCATGTCGTCGACGCAGAACGTTTCCAAAGCGTC-CGC 365
consensus_8759#5 ---GCGCGATACCGATCGGGCGGCCAAGTTGCGC----GAGCGGCTGCAGAAGAAC-AAC 207
consensus_8759#1 -CGAGGACGCATCTAGATGTGTCATTCT-TTGAGGAATATATCTTGCCACCACCAC-CAC 408
consensus_8759#3 ATGGTAGCGGATNCCGANNACCCATCCCATCCACCAAGGCGTTNNGCCACCACGAAATTT 360
* *
consensus_8759#0 TGCAT-TGT-TTTGTTTTCAGCGCTGAAGTGGCATTCTTATGACGGTTTTATTTTA---- 2106
consensus_8759#4 TGCAT-TGT-TTTGTTTTCAGCGCTGAGGTGGCAT------------------------- 279
consensus_8759#2 TGCCTGCGA-GTCCTCGATCGAGCTGATCAAGCATTTGAGCACACTGCTGCTTGCAGAAT 424
consensus_8759#5 CGCCGCTGG-GATGCCG------------------------------------------- 223
consensus_8759#1 CACCACCACCAATACCACCAAAACACCACCAAAAACCTATCCAACCTCTTATTA--TACC 466
consensus_8759#3 CCCNGTAACCAANNCANTNNGGGCANGTGGCCAGANNGGGCCGACCGACGAATGGTCATC 420
*
consensus_8759#0 ------------------------------------------------------------
consensus_8759#4 ------------------------------------------------------------
consensus_8759#2 GTCACGCCACAGTGGAGGAAGCTTTCAGTGTGCGTGTGAAGGAAGAAACGGAACGATATC 484
consensus_8759#5 ------------------------------------------------------------
consensus_8759#1 ATCACCAACTATTCATCGCACACCGCCAACGAAGCTTTTGCTGTTGTCTTCGTCGTCGTC 526
consensus_8759#3 ANCCCCCCACGATANTCNCGCANGCCTNTCGNATTCTTNGGGCGTGTCTCCGTGCCTGTT 480
consensus_8759#0 ------------------------------------------------------------
consensus_8759#4 ------------------------------------------------------------
consensus_8759#2 ATCGTTTGTTGACCGTGTGGAAGGAGAAGCAAGAACAGATGGAAGAATCAAGGATCATTC 544
consensus_8759#5 ------------------------------------------------------------
consensus_8759#1 GTCGTCGACATCGTTACCACCAGTCGCGGGCTTACTGCGGCGGCGGTCTCA--GTTTTGT 584
consensus_8759#3 NCC-CNTCCNGCGATGCTGTNN-TTGCTGCTNGGNTGTGGTNNNCGCTTCATGGCCCCCC 538
consensus_8759#0 ------------------------------------------------------------
consensus_8759#4 ------------------------------------------------------------
consensus_8759#2 CTAATGCTTACAATTTTAACTGCGTACACAATGCGGACTACCTAACGTGTCCGCTGTGTA 604
consensus_8759#5 ------------------------------------------------------------
consensus_8759#1 TTGTTGCACACAGTCTGTTTGTCTAGCCACCAGCAAGATGG-TAGCGGATCCCGAAACCA 643
consensus_8759#3 CGGGTGAAGGGAAGTTTCCTCCCTGGCAACCCCTTGGGC------CAAAACCCAAAATTT 592
consensus_8759#0 ------------------------------------------------------------
consensus_8759#4 ------------------------------------------------------------
consensus_8759#2 CGAACCGCAACTGGCAGCAGATCGATAACGATCTGTGGCGCCTCGAGCAGTGGCTCGCAA 664
consensus_8759#5 ------------------------------------------------------------
consensus_8759#1 TCCATCACAAGCGTCGGCACACGATTCCAGTACAAACATTGGCAGTGCAGAGGGCGACGA 703
consensus_8759#3 TGGGC------------------------------------------------------- 597
consensus_8759#0 ----
consensus_8759#4 ----
consensus_8759#2 ----
consensus_8759#5 ----
consensus_8759#1 CGAT 707
consensus_8759#3 ----
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||