cluster # 8771

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Anopheles gambiae
cluster # 8771 cluster # 8771 Sequences # 12 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8771#0 length = 1221 sequences # 7
consensus_8771#1 length = 958 sequences # 3

consensus_8771#2 length = 858 sequences # 1
consensus_8771#3 length = 427 sequences # 1

consensusID : consensus_8771#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1221
fasta sequence

                              [GATAAGAACGTCGCCTGGCTCTCGGGTTTAAACCAGTCTGACGTGCAGGTGGAGGCTTAGCCGGTAACAGTTTGACGGTCACAGACAGTAGAACAATTGAAACAGTGGCTTTGAGCTTGAAGATACGATCGTTCTCATAGTGTGAGTTACGTACCGGTCATCTACACTACAGTCGTGAACGGATTTGGATGTCAAGAGGCAGCAATAACACATTCGCCGCCGATCGTCGCGCACAGATGATGTGACGTAGTGTTTGTGACAGCCTCGACCCTGGAAGCGTCAGCTCTGTTCTGCACAGGTGGCCTTGTGAAATGTGAGCTGCAACAACCTGCC-TGTAAACTACTATAACTCACAAACAAACACAAACAGATAAGCAAACGTCATTCTGAGAGTCACTCTGAGCACAAATCAAAACAATGATGCTGTTCGGAGGCATTTTACCGTATCTGCTTGTGCTATGGCAGCTACTGGCTTCGGTCGATGTCGCCCGGGCCCAGGACGAGCCGGCCCAGGAATCCGCCTGCCCAGCCATCGTGAAGCGGGCGGCCTGGGGTGCAGCCAAGTCGAAGAACGTCACCTACCAGCTGAAACCGGTCGCGAACGTGATCGTGCACCATACGACCGGGGAGCGGTGCGCGACAGTGGCCACCTGCAAGGAGATGGTGGCAAACATACAGACCTACCACCAGACCGACAACCGGTGGAGTGACATCGGCTACAACTTCCTAATCAGCGGGCAGAATGTGTACGAGGGCATCGGCTGGCACCGGAT-GGGGGCGCATCTGCGCGGCTACAACGACAAATCGA-TC-GGCGTCGCCTTCCTGGGCAACTTTGACCAAGAGCGGCCGACCCCCCGCAGCCTCAACCTGCTTGCCCGGCTACTCCAGTGC-GGTGTCGAGCTGGGCGAGCTAGCCGACGACTACCGGCTGTACG-GTGCCCGCCAGCTCCAGAGCACCAACAGCCCGGGCCGGTATCTGTACGCGAAGCTGCAAGAGCTTGACCACTGGCAGGCGCAATAGTAGAAGTAAAAGAACGACTCTGCTCTCTACTTGCAAAAGGCAAAAAAAAAAAACAAAAAACCCGGAAATACCCAATATCAATAAAGAGGTTTTCACGTACATGGCTCGGTTAGGATGCGGTCCCGATCTTCGCCAATCCCGTGGTTGCGTGCGTTGTGGCCGTTTTTTTGCCGTTC-CTGT-CGGAAAACAATTTGGCTATTCC]

[+] EMBL CNS08ZWP             [GATAAGAACGTCGCCTGGCTCTCGGGTTTAAACCAGTCTGACGTGCAGGTGGAGGCTTAGCCGGTAACAGTTTGACGGTCACAGACAGTAGAACAATTGAAACAGTGGCTTTGAGCTTGAAGATACGATCGTTCTCATAGTGTGAGTTACGTACCGGTCATCTACACTACAGTCGTGAACGGATTTGGATGTCAAGAGGCAGCAATAACACATTCGCCGCCGATCGTCGCGCACAGATGATGTGACGTAGTGTTTGTGACAGCCTCGACCCTAGAAGCGTCA CTCTGTTCTGCACAGGTGGCCTTGTGAAATGTGAGCTGCAACAACCTACCGGGGAAACTACTATAACTCACAAACAAACACAAACAGATAAGCAAACGTCATTCTGAGAGTCACTCTGAGCACAAATCAAAACAATGATGCTGTTCGGAGGCATTTTACCGTATCTGCTTGTGCTATGGCAGCTACTGGCTTCGGTCGATGTCGCCCGGGCCCAGGACGAGCCGGCCCAGGAATCCGCCTGCCCAGCCATCGTGAAGCGGGCGGCCTGGGGTGCAGCCAAATCGAAGAACGTCACCTACCAGCTGAAACCGGTCGCGAACGTGATCGTGCACCATACGACCGGGGAGCGGTGCGCGACAGTGGCCACCTGCAA GAGATGGTGGCAAACATACAGACCTACCACCAGACCGACAACCGGTGGAGTGACATCGGCTACAACTTCCTAATCAGCGGGCAGAATGTGTACGAGGGCATCGGCTGGCACCGGAT GGGGGCGCATCTGCGCGGCTACAGCGACAAATCGA TC GGCGTCGCCTTCCTGGGCAACTTTGACCAAGAGCGGCCGACCCCCCGCAGCCTCAACCTGCTTGCCCGGCTACTCCAGTGC GGTGTCGAGCTGGGCGAGCTAGCCGACGACTACCGGCTGTACG GTGCCCGCCAGCTCCAGAGCACCAACAGCCCGGGCCGGTATCTGTACGCGActg                                                                                                                                                                                                                                            ]
[+] EMBL BX621557             [                                                                                                                                                                                    GGATTTGGATGTCAAGAGGCAGCAATAACACATTCGCCGCCGATCGTCGCGCACAGATGATGTGACGTAGTGTTTGTGACAGCCTCGACCCTGGAAGCGTCAGCTCTGTTCTGCACAGGTGGCCTTGTGAAATGTGAGCTGCAACAACCTGCC TGTAAACTACTATAACTCACAAACAAACACAAACAGATAAGCAAACGTCATTCTGAGAGTCACTCTGAGCACAAATCAAAACAATGATGCTGTTCGGAGGCATTTTACCGTATCTGCTTGTGCTATGGCAGCTACTGGCTTCGGTCGATGTCGCCCGGGCCCAGGACGAGCCGGCCCAGGAATCCGCCTGCCCAGCCATCGTGAAGCGGGCGGCCTGGGGTGCAGCCAAGTCGAAGAACGTCACCTACCAGCTGAAACCGGTCGCGAACGTGATCGTGCACCATACGACCGGGGAGCGGTGCGCGACAGTGGCCACCTGCAAGGAGATGGTGGCAAACATACAGACCTACCACCAGACCGACAACCGGTGGAGTGACATCGGCTACAACTTCCTAATCAGCGGGCAGAATGTGTACGAGGGCATCGGCTGGCACCGGAT GGGGGCGCATCTGCGCGGCTACAACGACAAATCGA TC GGCGTCGCCTTCCTGGGCAACTTTGACCAAGAGCGGNCGACCCCCCGCAGCCTCAACCTGCTTGCCCGGCTACTCCAGTGC GGTGTCGAGCTGGGCGAGCTAGCCGACGACTACCGGCTGTACN GTGCCCGCCAGCTCCAGAGCACCAACAGCCCGGGNCGGTATCTGTACNCGAAGCTGCAAGAGCTTGACCAC                                                                                                                                                                                                                           ]
[+] EMBL BX622687             [                                                                                                                                                                                                                                                TGTGACGTAGTGTTTGTGACAGCCTCGACCCTGGAAGCGTCAGCTCTGTTCTGCACAGGTGGCCTTGTGAAATGTGAGCTGCAACAACCTGCC TGTAAACTACTATAACTCACAAACAAACACAAACAGATAAGCAAACGTCATTCTGAGAGTCACTCTGAGCACAAATCAAAACAATGATGCTGTTCGGAGGCATTTTACCGTATCTGCTTGTGCTATGGCAGCTACTGGCTTCGGTCGATGTCGCCCGGGCCCAGGACGAGCCGGCCCAGGAATCCGCCTGCCCAGCCATCGTGAAGCGGGCGGCCTGGGGTGCAGCCAAGTCGAAGAACGTCACCTACCAGCTGAAACCGGTCGCGAACGTGATCGTGCACCATACGACCGGGGAGCGGTGCGCGACAGTGGCCACCTGCAAGGAGATGGTGGCAAACATACAGACCTACCACCAGACCGACAACCGGTGGAGTGACATCGGCTACAACTTCCTAATCAGCGGGCAGAATGTGTACGAGGGCATCGGCTGGCACCGGAT GGGGGCGCATCTGCGCGGCTACAACGACAAATCGA TC GGCGTCGCCTTCCTGGGCAACTTTGACCAAGAGCGGCCGACCCCCCGCAGCCTCAACCTGCTTGCCCGGCTACTCCAGTGC GGTGTCGAGCTGGGCGAGCTAGCCGACGACTACCGGCTGTACG GTGCCCGCCAGCTCCAGAGCACCAACAGCCCGGGGCGGTATCTGTACGC                                                                                                                                                                                                                                                 ]
[+] EMBL BX618923             [                                                                                                                                                                                                                                                          TGTTTGTGACAGCCTCGACCCTGGAAGCGTCAGCTCTGTTCTGCACAGGTGGCCTTGTGAAATGTGAGCTGCAACAACCTGCC TGTAAACTACTATAACTCACAAACAAACACAAACAGATAAGCAAACGTCATTCTGAGAGTCACTCTGAGCACAAATCAAAACAATGATGCTGTTCGGAGGCATTTTACCGTATCTGCTTGTGCTATGGCAGCTACTGGCTTCGGTCGATGTCGCCCGGGCCCAGGACGAGCCGGCCCAGGAATCCGCCTGCCCAGCCATCGTGAAGCGGGCGGCCTGGGGTGCAGCCAAGTCGAAGAACGTCACCTACCAGCTGAAACCGGTCGCGAACGTGATCGTGCACCATACGACCGGGGAGCGGTGCGCGACAGTGGCCACCTGCAAGGAGATGGTGGCAAACATACAGACCTACCACCAGACCGACAACCGGTGGAGTGACATCGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CNS08ZX6             [                                                                                                                                                                                                                                                                                                                                                                                                                          aAAAAAAATGATGCTGTTCGGAGGCATTTTACCGTATCTGCTTGTGCTATGGCAGCAACTGGCTTCGGTCGATGTCGCCCGGGCCCAGGACGAGCCGGCCCAGGAATCCGCCTGCCCAGCCATCGTGAAGCGGGCGGCCTGGGGTGCAGCCAAATCGAAGAACGTCACCTACCAGCTGAAACCGGTCGCGAACGTGATCGTGCACCATACGACCGGGGAGCGGTGCGCGACAGTGGCCACCTGCAAGGAGATGGTGGCAAACATACAGACCTACCACCAGACCGACAACCGGTGGAGTGACATCGGCTACAACTTCCTAATCAGCGGGCAGAATGTGTACGAGGGCATCGGCTGGCACCGGAT GGGGGCGCATCTGCGCGGCTACAGCGACAAATCGG GC GGCGTCGCCTTCCTGGGCAACTTTGACCAAGAGCGGCCGACCCCCCGCAGCCTCAACCTGCTTGCCCGGCTACTCCAGTGC GGTGTCGAGCTGGGCGAGCTAGCCGACGACTACCGGCTGTACGCGTGCCCGCCAGCTCCAGAGCACCAACAGCCCGGGCCGGTATCTGTACGCGAAGCTGCAAGAGCTTGACCACTGGCAGGCGCAATAGTAGAAGTAAAAGAACGACTCTGCTCTCTACTTGCAAAAGGCAAAAAAAAAAAACAAAAAACCCGGAAATACCCAATATCAATAAAGAGGTTTTCACGTACATGGCTCGGTTAGGATGCGGTCCCGAT                                                                             ]
[-] EMBL CNS09A73             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GATGGGGGGGGCATCTGCGCGGCTACAACGACAAATCGATTC GGCGTCGCCTTCCTGGGCAACTTTGACCAAGAGCGGCCGACCCCCCGCAGCCTCAACCTGCTTGCCCGGCTACTCCAGTGCGGGTGTCGAGCTGGGCGAGCTAGCCGACGACTACCGGCTGTACG GTGCCCGCCAGCTCCAGAGCACCAACAGCCCGGGCCGGTATCTGTACGCGAAGCTGCAAGAGCTTGACCACTGGCAGGCGCAATAGTAGAAGTAAAAGAACGACTCTGCTCTCTACTTGCAAAAGGCAAAAAAAAAAAACAAAAAACCCGGAAATACCCAATATCAATAAAGAGGTTTTCACGTACATGGCTCGGTTAGGATGCGGTCCCGATCTTCGCCAATCCCGTGGTTGCGTGCGTTGTGGCCGTTTTTTTGCCGTTCGCTGTGCGGAAAACAATTTGGCTATTCC]
[-] EMBL CNS09R4T             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GAT GGGGGCGCATCTGCGCGGCTACAACGACAAATCGATTCGGGCGTCGCCTTCCTGGGCAACTTTGACCAAGAGCGGCCGACCCCCCGCAGCCTCAACCTGCTTGCCCGGCAACTCCAGTGC GGTGTCGAGCTGGGCGAGCTAGCCGACGACTACCGGCTGTACG GTGCCCGCCAGCTCCAGAGCACCAACAGCCCGGGCCGGTATCTGTACGCGAAGCTGCAAGAGCTTGACCACTGGCAGGCGCAATAGTAGAAGTAAAAGAACGACTCTGCTCTCTACTTGCAAAAGGCAAAAAAAAAAAACAAAAAACCCGGAAATACCCAATATCAATAAAGAGGTTTTCACGTACATGGCTCGGTTAGGATGCGGTCCCGATCTTCGCCAATCCCGTGGTTGCGTGCGTTGTGGCCGTTTCTTTGCCGTTC CTGT CGGAAA                ]




>consensus_8771#0
GATAAGAACGTCGCCTGGCTCTCGGGTTTAAACCAGTCTGACGTGCAGGTGGAGGCTTAG
CCGGTAACAGTTTGACGGTCACAGACAGTAGAACAATTGAAACAGTGGCTTTGAGCTTGA
AGATACGATCGTTCTCATAGTGTGAGTTACGTACCGGTCATCTACACTACAGTCGTGAAC
GGATTTGGATGTCAAGAGGCAGCAATAACACATTCGCCGCCGATCGTCGCGCACAGATGA
TGTGACGTAGTGTTTGTGACAGCCTCGACCCTGGAAGCGTCAGCTCTGTTCTGCACAGGT
GGCCTTGTGAAATGTGAGCTGCAACAACCTGCCTGTAAACTACTATAACTCACAAACAAA
CACAAACAGATAAGCAAACGTCATTCTGAGAGTCACTCTGAGCACAAATCAAAACAATGA
TGCTGTTCGGAGGCATTTTACCGTATCTGCTTGTGCTATGGCAGCTACTGGCTTCGGTCG
ATGTCGCCCGGGCCCAGGACGAGCCGGCCCAGGAATCCGCCTGCCCAGCCATCGTGAAGC
GGGCGGCCTGGGGTGCAGCCAAGTCGAAGAACGTCACCTACCAGCTGAAACCGGTCGCGA
ACGTGATCGTGCACCATACGACCGGGGAGCGGTGCGCGACAGTGGCCACCTGCAAGGAGA
TGGTGGCAAACATACAGACCTACCACCAGACCGACAACCGGTGGAGTGACATCGGCTACA
ACTTCCTAATCAGCGGGCAGAATGTGTACGAGGGCATCGGCTGGCACCGGATGGGGGCGC
ATCTGCGCGGCTACAACGACAAATCGATCGGCGTCGCCTTCCTGGGCAACTTTGACCAAG
AGCGGCCGACCCCCCGCAGCCTCAACCTGCTTGCCCGGCTACTCCAGTGCGGTGTCGAGC
TGGGCGAGCTAGCCGACGACTACCGGCTGTACGGTGCCCGCCAGCTCCAGAGCACCAACA
GCCCGGGCCGGTATCTGTACGCGAAGCTGCAAGAGCTTGACCACTGGCAGGCGCAATAGT
AGAAGTAAAAGAACGACTCTGCTCTCTACTTGCAAAAGGCAAAAAAAAAAAACAAAAAAC
CCGGAAATACCCAATATCAATAAAGAGGTTTTCACGTACATGGCTCGGTTAGGATGCGGT
CCCGATCTTCGCCAATCCCGTGGTTGCGTGCGTTGTGGCCGTTTTTTTGCCGTTCCTGTC
GGAAAACAATTTGGCTATTCC

consensusID : consensus_8771#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 958
fasta sequence

                              [GACGGTCACAGACAGTAGAACAATTGAAACAGTGGCTTTGAGCTTGAAGATACGATCGTTCTCATAGTGTGAGTGACGTACCGGTCATCTACACTACAGTCGTGAACGGATTTGGATGTCAAGAGGCAGCAATAACACATTCGCCGCCGATCGTCGCGCACAGATGATGTGACGTAGTGTTTGTGACAGCCTCGACCCTAGAAGCGTCGACTCTGTTCTGCACAGGTGGCCTTGTGAAATGTGAGCTGCAACAACCTACCTGTAAACTACTATAACTCACAAACAAACACAAACAGATAAGCAAACGTCATTCTGAGAGTCACTCTGAGCACAAATCAAAACAATGATGCTGTTCGGAGGCATTTTACCGTATCTGCTTGTGCTATGGCAGCTACTGGCTTCGGTCGATGTCGCCCGGGCCCAGGACGAGCCGGCCCAGGAATCCGCCTGCCCAGCCATCGTGAAGCGGGCGGCCTGGGGTGCAGCCAAATCGAAGAACGTCACCTACCAGCTGAAACCGGTCGCGAACGTGATCGTGCACCATACGACCGGGGAGCGGTGCGCGACAGTGGCCACCTGCAA-GAGATGGTGGCAAACATACAGACCTACCACCAGACCGACAACCGGTGGAGTGACATCGGCTACAAGTGAGCTTACGTTTAAGCACTAATGTTTATGTGGAATCCTCATATCCTTCTCCCTCTCTCTATCTTCAGCTTCCTAATCAGCGGGCAGAATGTGTACGAGGGCATCGGCTGGCACCGGATGGGGGCGCATCTGCGCGGCTACAACGACAAATCGATCGGCGTCGCCTTCCTGGGCAACTTTGACCAAGAGCGGCCGACCCCCCGCAGCCTCAACCTGCTTGCCCGGCTACTCCAGTGCGGTGTCGAGCTGGGCGAGCTAGCCGACGACTACCGGCTGTACGGTGCCCGCCAGCTCCAGAGCACCAACAGCC]

[+] EMBL CNS09R4S             [GACGGTCACAGACAGTAGAACAATTGAAACAGTGGCTTTGAGCTTGAAGATACGATCGTTCTCATAGTGTGAGTGACGTACCGGTCATCTACACTACAGTCGTGAACGGATTTGGATGTCAAGAGGCAGCAATAACACATTCGCCGCCGATCGTCGCGCACAGATGATGTGACGTAGTGTTTGTGACAGCCTCGACCCTAGAAGCGTCGACTCTGTTCTGCACAGGTGGCCTTGTGAAATGTGAGCTGCAACAACCTACCTGTAAACTACTATAACTCACAAACAAACACAAACAGATAAGCAAACGTCATTCTGAGAGTCACTCTGAGCACAAATCAAAACAATGATGCTGTTCGGAGGCATTTTACCGTATCTGCTTGTGCTATGGCAGCTACTGGCTTCGGTCGATGTCGCCCGGGCCCAGGACGAGCCGGCCCAGGAATCCGCCTGCCCAGCCATCGTGAAGCGGGCGGCCTGGGGTGCAGCCAAATCGAAGAACGTCACCTACCAGCTGAAACCGGTCGCGAACGTGATCGTGCACCATACGACCGGGGAGCGGTGCGCGACAGTGGCCACCTGCAA GAGATGGTGGCAAACATACAGACCTACCACCAGACCGACAACCGGTGGAGTGACATCGGCTACAAGTGAGCTTACGTTTAAGCACTAATGTTTATGTGGAGTCCTCATATCCTTCTCCCTCTCTCTATCTTCAGCTTCCTAATCAGCGGGCAGAATGTGTACGAGGGCATCGGCTGGCACCGGATGGGGGCGCATCTGCGCGGCTACAACGACAAATCGATCGGCGTCGCCTTCCTGGGCAACTTTGACCAAGAGCGGCCGACCCCCCGCAGCCTCAACCTGCTTGCCCGGCTACTCCAGTGCGGTGTCGAGCTGGGCGAGCTAGCCGACGACTACCGGCTGTACGGTGCCCGCCAGCTCCAGAGCACCAACAGCC]
[+] EMBL CNS09346             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                      GCCATCGTGAAGCGGGCGGCCTGGGGTGCAGCCAAATCGAAGAACGTCACCTACCAGCTGAAACCGGTCGCGAACGTGATCGTGCACCATACGACCGGGGAGCGGTGCGCGACAGTGGCCACCTGCAAGGAGATGGTGGCAAACATACAGACCTACCACCAGACCGACAACCGGTGGAGTGACATCGGCTACAAGTGAGCTTACGTTTAAGCACTAATGTTTATGTGGAATCCTCATATCCTTCTCCCTCTCTCTATCTTCAGCTTCCTAATCAGCGGGCAGAATGTGTACGAGGGCATCGGCTGGCACCGGATGGGGGCGCATCTGCGCGGCTACAACGACAAATCGATCGGCGTCGCCTTCCTGGGCAACTTTGACCAAGA                                                                                                                          ]
[-] EMBL CNS09347             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           CTAATGTTTATGTGGAATCCTCATATCCTTCTCCCTATTTCTATCTTCAGCTTCCTAATCAGCGGGCAGAATGTGTACGAGGGCATCGGCTGGCA                                                                                                                                                                                                     ]




>consensus_8771#1
GACGGTCACAGACAGTAGAACAATTGAAACAGTGGCTTTGAGCTTGAAGATACGATCGTT
CTCATAGTGTGAGTGACGTACCGGTCATCTACACTACAGTCGTGAACGGATTTGGATGTC
AAGAGGCAGCAATAACACATTCGCCGCCGATCGTCGCGCACAGATGATGTGACGTAGTGT
TTGTGACAGCCTCGACCCTAGAAGCGTCGACTCTGTTCTGCACAGGTGGCCTTGTGAAAT
GTGAGCTGCAACAACCTACCTGTAAACTACTATAACTCACAAACAAACACAAACAGATAA
GCAAACGTCATTCTGAGAGTCACTCTGAGCACAAATCAAAACAATGATGCTGTTCGGAGG
CATTTTACCGTATCTGCTTGTGCTATGGCAGCTACTGGCTTCGGTCGATGTCGCCCGGGC
CCAGGACGAGCCGGCCCAGGAATCCGCCTGCCCAGCCATCGTGAAGCGGGCGGCCTGGGG
TGCAGCCAAATCGAAGAACGTCACCTACCAGCTGAAACCGGTCGCGAACGTGATCGTGCA
CCATACGACCGGGGAGCGGTGCGCGACAGTGGCCACCTGCAAGAGATGGTGGCAAACATA
CAGACCTACCACCAGACCGACAACCGGTGGAGTGACATCGGCTACAAGTGAGCTTACGTT
TAAGCACTAATGTTTATGTGGAATCCTCATATCCTTCTCCCTCTCTCTATCTTCAGCTTC
CTAATCAGCGGGCAGAATGTGTACGAGGGCATCGGCTGGCACCGGATGGGGGCGCATCTG
CGCGGCTACAACGACAAATCGATCGGCGTCGCCTTCCTGGGCAACTTTGACCAAGAGCGG
CCGACCCCCCGCAGCCTCAACCTGCTTGCCCGGCTACTCCAGTGCGGTGTCGAGCTGGGC
GAGCTAGCCGACGACTACCGGCTGTACGGTGCCCGCCAGCTCCAGAGCACCAACAGCC

consensusID : consensus_8771#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 858
fasta sequence

                              [ACTGGAAAAAATTTCGGGTTTAAACCAGTCTGACGTGCAGGTGGAGGCTTAGCCGGTAACAGTTTGACGGTCACAGACAGTAGAACAATTGAAACAGTGGCTTTGAGCTTGAAGATACGATCGTTCTCATAGTGTGAGTTACGTACCGGTCATCTACACTACAGTCGTGAACGGATTTGGATGTCAAGAGGCAGCAATAACACATTCGCCGCCGATCGTCGCGCACAGATGATGTGACGTAGTGTTTGTGACAGCCTCGACCCTAGAAGCGTCACTCTGTTCTGCACAGGTGGCCTTGTGAAATGTGAGCTGCAACAACCTACCTGTAAACTACTATAACTCACAAACAAACACAAACAGATAAGCAAACGTCATTCTGAGAGTCACTCTGAGCACAAATCAAAACAATGATGCTGTTCGGAGGCATTTTACCGTATCTGCTTGTGCTATGGCAGCTACTGGCTTCGGTCGATGTCGCCCGGGCCCAGGACGAGCCGGCCCAGGAATCCGCCTGCCCAGCCATCGTGAAGCGGGCGGCCTGGGGTGCAGCCAAATCGAAGAACGTCACCTACCAGCTGAAACCGGTCGCGAACGTGATCGTGCACCATACGACCGGGGAGCGGTGCGCGACAGTGGCCACCTGCAAGGAGATGGTGGCAAACATACAGACCTACCACCAGACCGACAACCGGTGGAGTGACACCGGCTACAACTTCCTAATCAGCGGGCAGAATGTGTACGAGGGCATCGGCTGGCACCGGATGGGGGCGCATCTGCGCGGCTACAACGACAAATCGATCGGCGTCGCCTTCCTGGGGCAACTTTTGACCAAGAGCGGCCGACCCCCCGCAGCCTCAA]

[+] EMBL CNS09A72             [ACTGGAAAAAATTTCGGGTTTAAACCAGTCTGACGTGCAGGTGGAGGCTTAGCCGGTAACAGTTTGACGGTCACAGACAGTAGAACAATTGAAACAGTGGCTTTGAGCTTGAAGATACGATCGTTCTCATAGTGTGAGTTACGTACCGGTCATCTACACTACAGTCGTGAACGGATTTGGATGTCAAGAGGCAGCAATAACACATTCGCCGCCGATCGTCGCGCACAGATGATGTGACGTAGTGTTTGTGACAGCCTCGACCCTAGAAGCGTCACTCTGTTCTGCACAGGTGGCCTTGTGAAATGTGAGCTGCAACAACCTACCTGTAAACTACTATAACTCACAAACAAACACAAACAGATAAGCAAACGTCATTCTGAGAGTCACTCTGAGCACAAATCAAAACAATGATGCTGTTCGGAGGCATTTTACCGTATCTGCTTGTGCTATGGCAGCTACTGGCTTCGGTCGATGTCGCCCGGGCCCAGGACGAGCCGGCCCAGGAATCCGCCTGCCCAGCCATCGTGAAGCGGGCGGCCTGGGGTGCAGCCAAATCGAAGAACGTCACCTACCAGCTGAAACCGGTCGCGAACGTGATCGTGCACCATACGACCGGGGAGCGGTGCGCGACAGTGGCCACCTGCAAGGAGATGGTGGCAAACATACAGACCTACCACCAGACCGACAACCGGTGGAGTGACACCGGCTACAACTTCCTAATCAGCGGGCAGAATGTGTACGAGGGCATCGGCTGGCACCGGATGGGGGCGCATCTGCGCGGCTACAACGACAAATCGATCGGCGTCGCCTTCCTGGGGCAACTTTTGACCAAGAGCGGCCGACCCCCCGCAGCCTCAA]




>consensus_8771#2
ACTGGAAAAAATTTCGGGTTTAAACCAGTCTGACGTGCAGGTGGAGGCTTAGCCGGTAAC
AGTTTGACGGTCACAGACAGTAGAACAATTGAAACAGTGGCTTTGAGCTTGAAGATACGA
TCGTTCTCATAGTGTGAGTTACGTACCGGTCATCTACACTACAGTCGTGAACGGATTTGG
ATGTCAAGAGGCAGCAATAACACATTCGCCGCCGATCGTCGCGCACAGATGATGTGACGT
AGTGTTTGTGACAGCCTCGACCCTAGAAGCGTCACTCTGTTCTGCACAGGTGGCCTTGTG
AAATGTGAGCTGCAACAACCTACCTGTAAACTACTATAACTCACAAACAAACACAAACAG
ATAAGCAAACGTCATTCTGAGAGTCACTCTGAGCACAAATCAAAACAATGATGCTGTTCG
GAGGCATTTTACCGTATCTGCTTGTGCTATGGCAGCTACTGGCTTCGGTCGATGTCGCCC
GGGCCCAGGACGAGCCGGCCCAGGAATCCGCCTGCCCAGCCATCGTGAAGCGGGCGGCCT
GGGGTGCAGCCAAATCGAAGAACGTCACCTACCAGCTGAAACCGGTCGCGAACGTGATCG
TGCACCATACGACCGGGGAGCGGTGCGCGACAGTGGCCACCTGCAAGGAGATGGTGGCAA
ACATACAGACCTACCACCAGACCGACAACCGGTGGAGTGACACCGGCTACAACTTCCTAA
TCAGCGGGCAGAATGTGTACGAGGGCATCGGCTGGCACCGGATGGGGGCGCATCTGCGCG
GCTACAACGACAAATCGATCGGCGTCGCCTTCCTGGGGCAACTTTTGACCAAGAGCGGCC
GACCCCCCGCAGCCTCAA

consensusID : consensus_8771#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 427
fasta sequence

                              [AATCGCACGAGGTGNNTAAGATACGATCGTTCTCATAGCTGTGAGTTACGTACCGGTCATCTACACTACAGTCGTGAACGGATTTGGATGTCAAGAGGCAGCAATAACACATTCGCCGCCGATCGTCGCGCACAGATATGTGACGTAGTGTTTGTGACAGCCTCGACCCTAGAAGCGTCAGCTCTGTTCTGCACAGGTGGCCTTGTGAAATGTGAGCTGCAACAAGCCTACCTGTAAACTACTATAACTCACGAAACAAACACGAAACAGATAAGCAAACGTCATTCTGAGAGTCACTCTGAGCACAGAATCAAAACAATGATGCTGTTCGGAGGCATTTTACCGTATCTGCGTTGTGCGTATGGCAGCGTACTGGCTTCGGTCGATGTCGCCCGGGCCCAGGACGGAGCCGGCCCAGGAATCCGCC]

[+] EMBL BX469288             [AATCGCACGAGGTGNNTAAGATACGATCGTTCTCATAGCTGTGAGTTACGTACCGGTCATCTACACTACAGTCGTGAACGGATTTGGATGTCAAGAGGCAGCAATAACACATTCGCCGCCGATCGTCGCGCACAGATATGTGACGTAGTGTTTGTGACAGCCTCGACCCTAGAAGCGTCAGCTCTGTTCTGCACAGGTGGCCTTGTGAAATGTGAGCTGCAACAAGCCTACCTGTAAACTACTATAACTCACGAAACAAACACGAAACAGATAAGCAAACGTCATTCTGAGAGTCACTCTGAGCACAGAATCAAAACAATGATGCTGTTCGGAGGCATTTTACCGTATCTGCGTTGTGCGTATGGCAGCGTACTGGCTTCGGTCGATGTCGCCCGGGCCCAGGACGGAGCCGGCCCAGGAATCCGCC]




>consensus_8771#3
AATCGCACGAGGTGNNTAAGATACGATCGTTCTCATAGCTGTGAGTTACGTACCGGTCAT
CTACACTACAGTCGTGAACGGATTTGGATGTCAAGAGGCAGCAATAACACATTCGCCGCC
GATCGTCGCGCACAGATATGTGACGTAGTGTTTGTGACAGCCTCGACCCTAGAAGCGTCA
GCTCTGTTCTGCACAGGTGGCCTTGTGAAATGTGAGCTGCAACAAGCCTACCTGTAAACT
ACTATAACTCACGAAACAAACACGAAACAGATAAGCAAACGTCATTCTGAGAGTCACTCT
GAGCACAGAATCAAAACAATGATGCTGTTCGGAGGCATTTTACCGTATCTGCGTTGTGCG
TATGGCAGCGTACTGGCTTCGGTCGATGTCGCCCGGGCCCAGGACGGAGCCGGCCCAGGA
ATCCGCC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8771#0      GATAAGAACGTCGCCTGGCTCTCGGGTTTAAACCAGTCTGACGTGCAGGTGGAGGCTTAG 60
consensus_8771#2      -------AC-TGGAAAAAATTTCGGGTTTAAACCAGTCTGACGTGCAGGTGGAGGCTTAG 52
consensus_8771#3      ------------------------------------------------------------
consensus_8771#1      ------------------------------------------------------------
                                                                                  

consensus_8771#0      CCGGTAACAGTTTGACGGTCACAGACAGTAGAACAATTGAAACAGTGGCTTTGAGCTTG- 119
consensus_8771#2      CCGGTAACAGTTTGACGGTCACAGACAGTAGAACAATTGAAACAGTGGCTTTGAGCTTG- 111
consensus_8771#3      -------------------------------------------AATCGCACGAGGTGNNT 17
consensus_8771#1      -------------GACGGTCACAGACAGTAGAACAATTGAAACAGTGGCTTTGAGCTTG- 46
                                                                 * * **     *     

consensus_8771#0      AAGATACGATCGTTCTCATAG-TGTGAGTTACGTACCGGTCATCTACACTACAGTCGTGA 178
consensus_8771#2      AAGATACGATCGTTCTCATAG-TGTGAGTTACGTACCGGTCATCTACACTACAGTCGTGA 170
consensus_8771#3      AAGATACGATCGTTCTCATAGCTGTGAGTTACGTACCGGTCATCTACACTACAGTCGTGA 77
consensus_8771#1      AAGATACGATCGTTCTCATAG-TGTGAGTGACGTACCGGTCATCTACACTACAGTCGTGA 105
                      ********************* ******* ******************************

consensus_8771#0      ACGGATTTGGATGTCAAGAGGCAGCAATAACACATTCGCCGCCGATCGTCGCGCACAGAT 238
consensus_8771#2      ACGGATTTGGATGTCAAGAGGCAGCAATAACACATTCGCCGCCGATCGTCGCGCACAGAT 230
consensus_8771#3      ACGGATTTGGATGTCAAGAGGCAGCAATAACACATTCGCCGCCGATCGTCGCGCACAGAT 137
consensus_8771#1      ACGGATTTGGATGTCAAGAGGCAGCAATAACACATTCGCCGCCGATCGTCGCGCACAGAT 165
                      ************************************************************

consensus_8771#0      GATGTGACGTAGTGTTTGTGACAGCCTCGACCCTGGAAGCGTCAGCTCTGTTCTGCACAG 298
consensus_8771#2      GATGTGACGTAGTGTTTGTGACAGCCTCGACCCTAGAAGCGTCA-CTCTGTTCTGCACAG 289
consensus_8771#3      -ATGTGACGTAGTGTTTGTGACAGCCTCGACCCTAGAAGCGTCAGCTCTGTTCTGCACAG 196
consensus_8771#1      GATGTGACGTAGTGTTTGTGACAGCCTCGACCCTAGAAGCGTCGACTCTGTTCTGCACAG 225
                       ********************************* ********  ***************

consensus_8771#0      GTGGCCTTGTGAAATGTGAGCTGCAACAA-CCTGCCTGTAAACTACTATAACTCAC-AAA 356
consensus_8771#2      GTGGCCTTGTGAAATGTGAGCTGCAACAA-CCTACCTGTAAACTACTATAACTCAC-AAA 347
consensus_8771#3      GTGGCCTTGTGAAATGTGAGCTGCAACAAGCCTACCTGTAAACTACTATAACTCACGAAA 256
consensus_8771#1      GTGGCCTTGTGAAATGTGAGCTGCAACAA-CCTACCTGTAAACTACTATAACTCAC-AAA 283
                      ***************************** *** ********************** ***

consensus_8771#0      CAAACAC-AAACAGATAAGCAAACGTCATTCTGAGAGTCACTCTGAGCACA-AATCAAAA 414
consensus_8771#2      CAAACAC-AAACAGATAAGCAAACGTCATTCTGAGAGTCACTCTGAGCACA-AATCAAAA 405
consensus_8771#3      CAAACACGAAACAGATAAGCAAACGTCATTCTGAGAGTCACTCTGAGCACAGAATCAAAA 316
consensus_8771#1      CAAACAC-AAACAGATAAGCAAACGTCATTCTGAGAGTCACTCTGAGCACA-AATCAAAA 341
                      ******* ******************************************* ********

consensus_8771#0      CAATGATGCTGTTCGGAGGCATTTTACCGTATCTGC-TTGTGC-TATGGCAGC-TACTGG 471
consensus_8771#2      CAATGATGCTGTTCGGAGGCATTTTACCGTATCTGC-TTGTGC-TATGGCAGC-TACTGG 462
consensus_8771#3      CAATGATGCTGTTCGGAGGCATTTTACCGTATCTGCGTTGTGCGTATGGCAGCGTACTGG 376
consensus_8771#1      CAATGATGCTGTTCGGAGGCATTTTACCGTATCTGC-TTGTGC-TATGGCAGC-TACTGG 398
                      ************************************ ****** ********* ******

consensus_8771#0      CTTCGGTCGATGTCGCCCGGGCCCAGGACG-AGCCGGCCCAGGAATCCGCCTGCCCAGCC 530
consensus_8771#2      CTTCGGTCGATGTCGCCCGGGCCCAGGACG-AGCCGGCCCAGGAATCCGCCTGCCCAGCC 521
consensus_8771#3      CTTCGGTCGATGTCGCCCGGGCCCAGGACGGAGCCGGCCCAGGAATCCGCC--------- 427
consensus_8771#1      CTTCGGTCGATGTCGCCCGGGCCCAGGACG-AGCCGGCCCAGGAATCCGCCTGCCCAGCC 457
                      ****************************** ********************         

consensus_8771#0      ATCGTGAAGCGGGCGGCCTGGGGTGCAGCCAAGTCGAAGAACGTCACCTACCAGCTGAAA 590
consensus_8771#2      ATCGTGAAGCGGGCGGCCTGGGGTGCAGCCAAATCGAAGAACGTCACCTACCAGCTGAAA 581
consensus_8771#3      ------------------------------------------------------------
consensus_8771#1      ATCGTGAAGCGGGCGGCCTGGGGTGCAGCCAAATCGAAGAACGTCACCTACCAGCTGAAA 517
                                                                                  

consensus_8771#0      CCGGTCGCGAACGTGATCGTGCACCATACGACCGGGGAGCGGTGCGCGACAGTGGCCACC 650
consensus_8771#2      CCGGTCGCGAACGTGATCGTGCACCATACGACCGGGGAGCGGTGCGCGACAGTGGCCACC 641
consensus_8771#3      ------------------------------------------------------------
consensus_8771#1      CCGGTCGCGAACGTGATCGTGCACCATACGACCGGGGAGCGGTGCGCGACAGTGGCCACC 577
                                                                                  

consensus_8771#0      TGCAAGGAGATGGTGGCAAACATACAGACCTACCACCAGACCGACAACCGGTGGAGTGAC 710
consensus_8771#2      TGCAAGGAGATGGTGGCAAACATACAGACCTACCACCAGACCGACAACCGGTGGAGTGAC 701
consensus_8771#3      ------------------------------------------------------------
consensus_8771#1      TGCAAG-AGATGGTGGCAAACATACAGACCTACCACCAGACCGACAACCGGTGGAGTGAC 636
                                                                                  

consensus_8771#0      ATCGGCTACAA------------------------------------------------- 721
consensus_8771#2      ACCGGCTACAA------------------------------------------------- 712
consensus_8771#3      ------------------------------------------------------------
consensus_8771#1      ATCGGCTACAAGTGAGCTTACGTTTAAGCACTAATGTTTATGTGGAATCCTCATATCCTT 696
                                                                                  

consensus_8771#0      --------------------CTTCCTAATCAGCGGGCAGAATGTGTACGAGGGCATCGGC 761
consensus_8771#2      --------------------CTTCCTAATCAGCGGGCAGAATGTGTACGAGGGCATCGGC 752
consensus_8771#3      ------------------------------------------------------------
consensus_8771#1      CTCCCTCTCTCTATCTTCAGCTTCCTAATCAGCGGGCAGAATGTGTACGAGGGCATCGGC 756
                                                                                  

consensus_8771#0      TGGCACCGGATGGGGGCGCATCTGCGCGGCTACAACGACAAATCGATCGGCGTCGCCTTC 821
consensus_8771#2      TGGCACCGGATGGGGGCGCATCTGCGCGGCTACAACGACAAATCGATCGGCGTCGCCTTC 812
consensus_8771#3      ------------------------------------------------------------
consensus_8771#1      TGGCACCGGATGGGGGCGCATCTGCGCGGCTACAACGACAAATCGATCGGCGTCGCCTTC 816
                                                                                  

consensus_8771#0      CTGGG-CAACTTT-GACCAAGAGCGGCCGACCCCCCGCAGCCTCAACCTGCTTGCCCGGC 879
consensus_8771#2      CTGGGGCAACTTTTGACCAAGAGCGGCCGACCCCCCGCAGCCTCAA-------------- 858
consensus_8771#3      ------------------------------------------------------------
consensus_8771#1      CTGGG-CAACTTT-GACCAAGAGCGGCCGACCCCCCGCAGCCTCAACCTGCTTGCCCGGC 874
                                                                                  

consensus_8771#0      TACTCCAGTGCGGTGTCGAGCTGGGCGAGCTAGCCGACGACTACCGGCTGTACGGTGCCC 939
consensus_8771#2      ------------------------------------------------------------
consensus_8771#3      ------------------------------------------------------------
consensus_8771#1      TACTCCAGTGCGGTGTCGAGCTGGGCGAGCTAGCCGACGACTACCGGCTGTACGGTGCCC 934
                                                                                  

consensus_8771#0      GCCAGCTCCAGAGCACCAACAGCCCGGGCCGGTATCTGTACGCGAAGCTGCAAGAGCTTG 999
consensus_8771#2      ------------------------------------------------------------
consensus_8771#3      ------------------------------------------------------------
consensus_8771#1      GCCAGCTCCAGAGCACCAACAGCC------------------------------------ 958
                                                                                  

consensus_8771#0      ACCACTGGCAGGCGCAATAGTAGAAGTAAAAGAACGACTCTGCTCTCTACTTGCAAAAGG 1059
consensus_8771#2      ------------------------------------------------------------
consensus_8771#3      ------------------------------------------------------------
consensus_8771#1      ------------------------------------------------------------
                                                                                  

consensus_8771#0      CAAAAAAAAAAAACAAAAAACCCGGAAATACCCAATATCAATAAAGAGGTTTTCACGTAC 1119
consensus_8771#2      ------------------------------------------------------------
consensus_8771#3      ------------------------------------------------------------
consensus_8771#1      ------------------------------------------------------------
                                                                                  

consensus_8771#0      ATGGCTCGGTTAGGATGCGGTCCCGATCTTCGCCAATCCCGTGGTTGCGTGCGTTGTGGC 1179
consensus_8771#2      ------------------------------------------------------------
consensus_8771#3      ------------------------------------------------------------
consensus_8771#1      ------------------------------------------------------------
                                                                                  

consensus_8771#0      CGTTTTTTTGCCGTTCCTGTCGGAAAACAATTTGGCTATTCC 1221
consensus_8771#2      ------------------------------------------
consensus_8771#3      ------------------------------------------
consensus_8771#1      ------------------------------------------