cluster # 8773

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Anopheles gambiae
cluster # 8773 cluster # 8773 Sequences # 12 consensus # 6

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8773#0 length = 1031 sequences # 4
consensus_8773#1 length = 992 sequences # 3
consensus_8773#2 length = 711 sequences # 2

consensus_8773#3 length = 678 sequences # 1
consensus_8773#4 length = 471 sequences # 1
consensus_8773#5 length = 441 sequences # 1

consensusID : consensus_8773#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1031
fasta sequence

                              [GGCAAGAATCGGCACGAGGTGAAAGATTACTCAAAAACACTGGCCCCAAAAAGAGCTATTCTTAAAACTAATCGTAACATGGGTTGATTAAGTATGTGAAAATCCGTTTTAGGATTGTTTTCCATCAATAACTTCTTGATATTGCGTGTGCGTGTATGTGTGTGAGTGTGTGTGTGTGTGTGTTTGTGCCCTCCGTTCCATAACACCTCACCTGTCGTCGTCATGTCGACTATGTTACAAAGAAGATAAAACCCGAACTGTTCACTATAAGAAAGGAATGTATTAATGGAAAGAGCTTCGGATGAGCAACATTTGTAGGGCAGCAAATTCCGCGCTAGTAGGATATTGTTTTAATGCTTATTCTCTTTTGTATTTGCAATGCGTTGCGTCGGAACGATGATACACACACATACAATATAAAATATTAGGTACAACTGTTGTTATCCCGTAAAAGTATACTTTATTGTAAATAAGCACATAGGTTTCGATAATAATGATTTTGAATCGGTTAACCGCGAGGTAATTACTGCAAGGGAAATAATCATAAGTTTAGGTAGAATTGCATAACTGGAATTTGTACGCAGTTGTTTGTCTTTGGTATCCATGTAGCATCGGTCCTTATGGTTTTGTGTCTGTACACCAACTTGTCAGTTTTGCATTTTATTTCCGT-T-AGTTTGTATATCGTCTGAAGTGAAAACATACAGATGT-CATGAACATGATCAAATA-GATAAAACCAGACAATTAACAACATGCTTAGCAAAGACTAA--AAAAAAAATTCAAA-ACAAT-GAAAAACTCATGTTAGTAGCATTAGGT-AATA-GCA-AAAT-CACTCGAACAGAATGTGAACATACGAGAAGTTAAAAAAAAATCACACACACATACACACATTATAAAATGTGAAAAAAATGAAAACAAAAATCATTTACGCTTAAACATGAAAGGATTTAAACATATGCTAATTTAAAGACTAGTTTTTTTTTCTTCTCTCTCACACATTGTAATCCGGAGGAAGTGAGTGTATAATGACTATGTAA]

[+] EMBL BX468527             [GGCAAGAATCGGCACGAGGTGAAAGATTACTCAAAAACACTGGCCCCAAAAAGAGCTATTCTTAAAACTAATCGTAACATGGGTTGATTAAGTATGTGAAAATCCGTTTTAGGATTGTTTTCCATCAATAACTTCTTGATATTGCGTGTGCGTGTATGTGTGTGAGTGTGTGTGTGTGTGTGTTTGTGCCCTCCGTTCCATAACACCTCACCTGTCGTCGTCATGTCGACTATGTTACAAAGAAGATAAAACCCGAACTGTTCACTATAAGAAAGGAATGTATTAATGGAAAGAGCTTCGGATGAGCAACATTTGTAGGGCAGCAAATTCCGCGCTAGTAGGATATTGTTTTAATGCTTATTCTCTTTTGTATTTGCAATGCGTTGCGTCGGAACGATGATACACACACATACAATATAAAATATTAGGTACAACTGTTGTTATCCCGTAAAAGTATACTTTATTGTAAATAAGCACATAGGTTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL BX469691             [                                                                                                                                                                                                                                                                                                   cacgaggctGATGAGCAACATTTGTAGGGCAGCAAATTCCGCGCTAGTAGGATATTG TTTAATGCTTATTCTCTTTTGTATTTGCAATGCGTTGCGTCGGAACGATGATACACACACATACAATATAAAATATTAGGTACAACTGTTGTTATCCCGTAAAAGTATACTTTATTGTAAATAAGCACATAGGTTTCGATAATAATGATTTTGAATCGGTTAACCGCGAGGTAATTACTGCAAGGGAAATAATCATAAGTTTAGGTAGAATTGCATAACTGGAATTTGTACGCAGTTGTTTGTCTTTGGTATCCATGTAGCATCGGTCCTTATGGTTTTGTGTCTGTACACCAACTTGTCAGTTTTGCATTTTATTTCCGTNTGAGTTTGTATATCGTCTGAAGTGAAAACATACAGATGTACATGAACATGATCNAATACGAT AAACCAGACAATTAACAACATGCTTAGCAAAGACTAACNGAAACAAATTCAAACACAATCGAAAAACTCATGTTAGTAGCATTAGGTCAATACGCACACATCCACTCGAACAGAATGTGAACATACGAGAAGTTANAAAA                                                                                                                                                                         ]
[+] EMBL BM649347             [                                                                                                                                                                                                                                                                                                                                                                                                ccgGTCGGAACGATGATACACACACATACAATATAAAATATTAGGAACAACTGTTGTTATCCCGTAAAAGTATACTTTATTGTAAATAAGCACATAGGTTTCGATAATAATGATTTTGAATCGGTTAGCCGCGAGGTAATTACTGCAAGGGAAATAATCATAAGTTTAGGTAGAATTGCATAACTGGAATTTGTACGCAGTTGTTTGTCTTTGGTATCCATGTAGCATCGGTCCTTATGTTTTTGT TCTGTACACCAACTTGTCAGTTTTGCATTTTATTTCCGT T AGTTTGTATATCGTCTGAAGTGGAAACATACAGATGT CATGAACATGATCAAATA GATAAAACCAGACAATTAACAACATGCTTAGCAAAGACTAA  AAAAAAAATTCAAA ACAAT GAAAAACTCATGTTAGTAGCATTAGGT AATA GCA AAAT CAATCGAACAGAATGTGAACATACGAGAAGTTAAAAAAAAATCACACACACATACACACATTATAAAATGTGAAAAAAATGAAAACAAAAATCATTTACGCTTAAACATGAAAGGATTTAAACATATGCTAATTTAAAGACTAGTTTTTTTTTCTTCTCTCTCACACATTGTAATCCGGAGGAAGTGAGTGTATAATGACTATGTAA]
[-] EMBL AGA280180            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              TGCATTTTATTACGGT T AGTTTGTATATCGTCTGAAGTGAAAACAGACAGATGT CATGCACATGATCATATA GATAAAACCCGACATTTAACAACATGCTTAGCAAAGCCT A  AAAAAAAATTCAAA ACAAT GAAAAACTCATGTTAGTAGCATTAGGT GATC GCA AATT CATTCGAACAGAATGTGAACATACGAGAAGTTAAAAAAAAATCACACACACATACACACATTGTAAAATGTGAAAAAAAa                                                                                                                               ]




>consensus_8773#0
GGCAAGAATCGGCACGAGGTGAAAGATTACTCAAAAACACTGGCCCCAAAAAGAGCTATT
CTTAAAACTAATCGTAACATGGGTTGATTAAGTATGTGAAAATCCGTTTTAGGATTGTTT
TCCATCAATAACTTCTTGATATTGCGTGTGCGTGTATGTGTGTGAGTGTGTGTGTGTGTG
TGTTTGTGCCCTCCGTTCCATAACACCTCACCTGTCGTCGTCATGTCGACTATGTTACAA
AGAAGATAAAACCCGAACTGTTCACTATAAGAAAGGAATGTATTAATGGAAAGAGCTTCG
GATGAGCAACATTTGTAGGGCAGCAAATTCCGCGCTAGTAGGATATTGTTTTAATGCTTA
TTCTCTTTTGTATTTGCAATGCGTTGCGTCGGAACGATGATACACACACATACAATATAA
AATATTAGGTACAACTGTTGTTATCCCGTAAAAGTATACTTTATTGTAAATAAGCACATA
GGTTTCGATAATAATGATTTTGAATCGGTTAACCGCGAGGTAATTACTGCAAGGGAAATA
ATCATAAGTTTAGGTAGAATTGCATAACTGGAATTTGTACGCAGTTGTTTGTCTTTGGTA
TCCATGTAGCATCGGTCCTTATGGTTTTGTGTCTGTACACCAACTTGTCAGTTTTGCATT
TTATTTCCGTTAGTTTGTATATCGTCTGAAGTGAAAACATACAGATGTCATGAACATGAT
CAAATAGATAAAACCAGACAATTAACAACATGCTTAGCAAAGACTAAAAAAAAAATTCAA
AACAATGAAAAACTCATGTTAGTAGCATTAGGTAATAGCAAAATCACTCGAACAGAATGT
GAACATACGAGAAGTTAAAAAAAAATCACACACACATACACACATTATAAAATGTGAAAA
AAATGAAAACAAAAATCATTTACGCTTAAACATGAAAGGATTTAAACATATGCTAATTTA
AAGACTAGTTTTTTTTTCTTCTCTCTCACACATTGTAATCCGGAGGAAGTGAGTGTATAA
TGACTATGTAA

consensusID : consensus_8773#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 992
fasta sequence

                              [ACGGAAGTAAATGTTTACCGCAAATAAAGGAAATAAATGTACTCTAATCCCCCAGGCTAGCGAAGTGTCACAGAAAGAGAGAATAGCGGACAACAGATCAACCATCTAGTGGGGAGCCAGTAAGAAAAGAAAAACAACAAGTAAATTGAAAGATTAGCTCAAAAACACTGGCCCCAAAAAGAGCTATTCTTAAAACTAATCGTAACATGGGTTGATTAAGTATGTGAAAATCCGTTTTAGGATTGTTTTCCATCAATAACTTCTTGATATTGCGTGTGCGTATAT--------GTGTGTGAGTGTGTGTGTTTGTGCCCTCCGTTCCATAACACCTCACCTGTCGTCGTCATGCCGACTATGTTACAAAGAAGATAAAACCCGAACTGTTCACTATAAGAAAGGAATGTATTAATGGAAAGAGCTTCGGATGAGCAACATTTGTAGAGCAGCAAATTCCGCGCTAGTAGGATATTGTTCAATGCTTATTCTCTTTTGTATTTGCAATGCGTTGCGTCGGAACGATGATACACACACATACAATATAAAATATTAGGAACAACTGTTGTTATCCCGTAAAAGTATACTTTATTGTAAATAAGCACATAGGTTTCGATAATAATGATTTTGAATCGGTTAGCCGCGAGGTAATTACTGCAAGGGAAATAATCATAAGTTTAGGTAGAATTGCATAACTGGAATTTGTACGCAGTTGTTTGTCTTTGGTATCCATGTAGCATCGGTCCTTATGTTTTTGNTCTGTACACCAACTTGTCAGTTTTGCATTTTATTTCCGNTAGTTTGTATATCGTCTGAAGTGGAAACATACAGATGTCATGAACATGATCAAATAGATAAAACCAGACAATTAACAACATGCTTAGCAAAGACTAAAAAAAAAATTCAAAACAATGAAAAACTCATGTTAGTAGCATTAGGTAATAGCAAAATCAATCGAACAGAATGTGAACATACACACATTATAAAATGTGAAAAAAATG]

[+] EMBL BX621690             [ACGGAAGTAAATGTTTACCGCAAATAAAGGAAATAAATGTACTCTAATCCCCCAGGCTAGCGAAGTGTCACAGAAAGAGAGAATAGCGGACAACAGATCAACCATCTAGTGGGGAGCCAGTAAGAAAAGAAAAACAACAAGTAAATTGAAAGATTAGCTCAAAAACACTGGCCCCAAAAAGAGCTATTCTTAAAACTAATCGTAACATGGGTTGATTAAGTATGTGAAAATCCGTTTTAGGATTGTTTTCCATCAATAACTTCTTGATATTGCGTGTGCGTATAT        GTGTGTGAGTGTGTGTGTTTGTGCCCTCCGTTCCATAACACCTCACCTGTCGTCGTCATGTCGACTATGTTACAAAGAAGATAAAACCCGAACTGTTCACTATAAGAAAGGAATGTATTAATGGAAAGAGCTTCGGATGAGCAACATTTGTAGAGCAGCAAATTCCGCGCTAGTAGGATATTGTTCAATGCTTATTCTCTTTTGTATTTGCAATGCGTTGCGTCGGAACGATGATACACACACATACAATATAAAATATTAGGAACAACTGTTGTTATCCCGTAAAAGTATACTTTATTGTAAATAAGCACATAGGTTTCGATAATAATGATTTTGAATCGGTTAACCGCGAGGTAATTACTGCAAGGGAAATAATCATAAGTTTAGGTAGAATTGCATAACTGGAATTTGTACGCAGTTGTTTGTCTTTGGTATCCATGTAGCATCGGTCCTTATGTTTTTGNTCTGTACACCAACTTGTCAGTTTTGCATTTTATTTCCGNTAGTTTGTATA                                                                                                                                                                                                 ]
[+] EMBL BM646594             [                         ccgGGAAATAAATGTACTCTAATCCCCCAGGCTAGCGAAGTGTCACAGAAAGAGAGAATAGCGGACAACAGATCAACCATCTAGTGGGGAGCCAGTAAGAAAAGAAAAACGACAAGTAAAATGAAAGATTAACTCAAAAACACTGGCCCCAAAAAGAGCTATTCTTAAAACTAATCGTAACATGGGTTGATTAAGTATGTGAAAATCCGTTTTAGGATTGTTTTCCATCAATAACTTCTTGATATTGCGTGTGCGTGTATGTGTGCGAGTGTGTGTGTGTGTGTGTTTGTGCCCTCCGTTCCATAACACCTCACCTGTCGTCGTCATGCCGACTATGTTACAAAGAAGATAAAACCCGAACTGTTCACTATAAGAAAGGAATGTATTAATGGAAAGAGCTTCGGATGAGCAACATTTGTAGAGCAGCAAATTCCGCGCTAGTAGGATATTGTTCAATGCTTATTCTCTTTTGTATTTGCAATGCGTTGCGTCGGAACGATGATACACACACATACAATATAAAATATTAGGAACAACTGTTGTTATCCCGTAAAAGTATACTTTATTGTAAATAAGCACATAGGTTTCGATAATAATGATTTTGAATCGGTTAGCCGCGAGGTAATTACTGCAAGGGAAAT                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL BM655966             [                                                                                                                                                                                                                                                                                                                  ccgGTTTGTGCCCTCCGTTCCATAACACCTCACCTGTCGTCGTCATGCCGACTATGTTACAAAGAAGATAAAACCCGAACTGTTCACTATAAGAAAGGAATGTATTAATGGAAAGAGCTTCGGATGAGCAACATTTGTAGAGCAGCAAATTCCGCGCTAGTAGGATATTGTTCAATGCTTATTCTCTTTTGTATTTGCAATGCGTTGCGTCGGAACGATGATACACACACATACAATATAAAATATTAGGAACAACTGTTGTTATCCCGTAAAAGTATACTTTATTGTAAATAAGCACATAGGTTTCGATAATAATGATTTTGAATCGGTTAGCCGCGAGGTAATTACTGCAAGGGAAATAATCATAAGTTTAGGTAGAATTGCATAACTGGAATTTGTACGCAGTTGTTTGTCTTTGGCATCCATGTAGCATCGGTCCTTATGTTTTTGTTCTGTACACCAACTTGTCAGTTTTGCATTTTATTTCCGTTAGTTTGTATATCGTCTGAAGTGGAAACATACAGATGTCATGAACATGATCAAATAGATAAAACCAGACAATTAACAACATGCTTAGCAAAGACTAAAAAAAAAATTCAAAACAATGAAAAACTCATGTTAGTAGCATTAGGTAATAGCAAAATCAATCGAACAGAATGTGAACATACACACATTATAAAATGTGAAAAAAATG]




>consensus_8773#1
ACGGAAGTAAATGTTTACCGCAAATAAAGGAAATAAATGTACTCTAATCCCCCAGGCTAG
CGAAGTGTCACAGAAAGAGAGAATAGCGGACAACAGATCAACCATCTAGTGGGGAGCCAG
TAAGAAAAGAAAAACAACAAGTAAATTGAAAGATTAGCTCAAAAACACTGGCCCCAAAAA
GAGCTATTCTTAAAACTAATCGTAACATGGGTTGATTAAGTATGTGAAAATCCGTTTTAG
GATTGTTTTCCATCAATAACTTCTTGATATTGCGTGTGCGTATATGTGTGTGAGTGTGTG
TGTTTGTGCCCTCCGTTCCATAACACCTCACCTGTCGTCGTCATGCCGACTATGTTACAA
AGAAGATAAAACCCGAACTGTTCACTATAAGAAAGGAATGTATTAATGGAAAGAGCTTCG
GATGAGCAACATTTGTAGAGCAGCAAATTCCGCGCTAGTAGGATATTGTTCAATGCTTAT
TCTCTTTTGTATTTGCAATGCGTTGCGTCGGAACGATGATACACACACATACAATATAAA
ATATTAGGAACAACTGTTGTTATCCCGTAAAAGTATACTTTATTGTAAATAAGCACATAG
GTTTCGATAATAATGATTTTGAATCGGTTAGCCGCGAGGTAATTACTGCAAGGGAAATAA
TCATAAGTTTAGGTAGAATTGCATAACTGGAATTTGTACGCAGTTGTTTGTCTTTGGTAT
CCATGTAGCATCGGTCCTTATGTTTTTGNTCTGTACACCAACTTGTCAGTTTTGCATTTT
ATTTCCGNTAGTTTGTATATCGTCTGAAGTGGAAACATACAGATGTCATGAACATGATCA
AATAGATAAAACCAGACAATTAACAACATGCTTAGCAAAGACTAAAAAAAAAATTCAAAA
CAATGAAAAACTCATGTTAGTAGCATTAGGTAATAGCAAAATCAATCGAACAGAATGTGA
ACATACACACATTATAAAATGTGAAAAAAATG

consensusID : consensus_8773#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 711
fasta sequence

                              [TTTGAATGTGGTGCAGGCTCGGAAAATCGATAGACCAGAGGGGCTTGATTCGGTTGAAACGCCTGGGACATGTCTGAGGCTTGGCAGTGAGAAGTACACAAATATTGGGGGACCACGAGTAGACATGATGCAATATGCGGTTATCGGCCACCGGGCCAAAGTGCTACAACTCGTCGTCATGTCGACTATGTTACAAAGAAGATAAAACCCGAACTGTTCACTATAAGAAAGGAATGTATTAATGGAAAGAGCTTCGGATGAGCAACATTTGTAGGGCAGCAAATTCCGCGCTAGTAGGATATTGTTTAATGCTTATTCTCTTTTGTATTTGCAATGCGTTGCGTCGGAACGATGATACACACACATACAATATAAAATATTAGGTACAACTGTTGTTATCCCGTAAAAGTATACTTTATTGTAAATAAGCACATAGGTTTCGATAATAATGATTTTGAATCGGTTAACCGCGAGGTAATTACTGCAAGGGAAATAATCATAAGTTTAGGTAGAATTGCATAACTGGAATTTGTACGCAGTTGTTTGTCTTTGGTATCCATGTAGCATCGGTCCTTATGGTTTTGTTCTGTACACCAACTTGTCAGTTTTGCATTTTATTTCCGTTAGTTTGTATATCGTCTGAAGTGAAAACATACAGATGTCATGAACATGATCAAATAGATAAAACCAGACAATTAACAACATGCTTAG]

[+] EMBL BX625022             [TTTGAATGTGGTGCAGGCTCGGAAAATCGATAGACCAGAGGGGCTTGATTCGGTTGAAACGCCTGGGACATGTCTGAGGCTTGGCAGTGAGAAGTACACAAATATTGGGGGACCACGAGTAGACATGATGCAATATGCGGTTATCGGCCACCGGGCCAAAGTGCTACAACTCGTCGTCATGTCGACTATGTTACAAAGAAGATAAAACCCGAACTGTTCACTATAAGAAAGGAATGTATTAATGGAAAGAGCTTCGGATGAGCAACATTTGTAGGGCAGCAAATTCCGCGCTAGTAGGATATTGTTTAATGCTTATTCTCTTTTGTATTTGCAATGCGTTGCGTCGGAACGATGATACACACACATACAATATAAAATATTAGGTACAACTGTTGTTATCCCGTAAAAGTATACTTTATTGTAAATAAGCACATAGGTTTCGATAATAATGATTTTGAATCGGTTAACCGCGAGGTAATTACTGCAAGGGAAATAATCATAAGTTTAGGTAGAATTGCATAACTGGAATTTGTACGCAGTTGTTTGTCTTTGGTATCCATGTAGCATCGGTCCTTATGGTTTTGTTCTGTACACCAACTTGTCAGTTTTGCATTTTATTTCCGTTAGTTTGTATATCGTCTGAAGTGAAAACATACAGATGTCATGAACATGATCAAATAGATAAAACCAGACAATTAACAACATGCTTAG]
[+] EMBL AGA281879            [                                                                                                                                                                                                                                                                                                                                                                          ACATACAATATAAAATATTAGGTACAACTGTTGTTATCCCGTAAAAGTATACTTTATTGTAAATAAGCACATAGGTTTCGATAATAATGATTTTG                                                                                                                                                                                                                                                              ]




>consensus_8773#2
TTTGAATGTGGTGCAGGCTCGGAAAATCGATAGACCAGAGGGGCTTGATTCGGTTGAAAC
GCCTGGGACATGTCTGAGGCTTGGCAGTGAGAAGTACACAAATATTGGGGGACCACGAGT
AGACATGATGCAATATGCGGTTATCGGCCACCGGGCCAAAGTGCTACAACTCGTCGTCAT
GTCGACTATGTTACAAAGAAGATAAAACCCGAACTGTTCACTATAAGAAAGGAATGTATT
AATGGAAAGAGCTTCGGATGAGCAACATTTGTAGGGCAGCAAATTCCGCGCTAGTAGGAT
ATTGTTTAATGCTTATTCTCTTTTGTATTTGCAATGCGTTGCGTCGGAACGATGATACAC
ACACATACAATATAAAATATTAGGTACAACTGTTGTTATCCCGTAAAAGTATACTTTATT
GTAAATAAGCACATAGGTTTCGATAATAATGATTTTGAATCGGTTAACCGCGAGGTAATT
ACTGCAAGGGAAATAATCATAAGTTTAGGTAGAATTGCATAACTGGAATTTGTACGCAGT
TGTTTGTCTTTGGTATCCATGTAGCATCGGTCCTTATGGTTTTGTTCTGTACACCAACTT
GTCAGTTTTGCATTTTATTTCCGTTAGTTTGTATATCGTCTGAAGTGAAAACATACAGAT
GTCATGAACATGATCAAATAGATAAAACCAGACAATTAACAACATGCTTAG

consensusID : consensus_8773#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 678
fasta sequence

                              [CCGCGGACGCGTGGGGTACTCTAATCCCCCAGGCTAGCGAAGTGTCACAGAAAGAGAGAATAGCGGACAACAGATCAACCATCTAGTGGGGAGCCAGTAAGAAAAGAAAAACGACAAGTAAAATGAAAGATTAACTCAAAAACACTGGCCCCAAAAAGAGCTATTCTTAAAACTAATCGTAACATGGGTTGATTAAGTATGTGAAAATCCGTTTTAGGATTGTTTTCCATTAATAACTTCTTGATATTGCGTGTGCGTGTATGTGTGCGAGTGTGTGTGTGTGTGTGTTTGTGCCCTCCGTTCCATAACACCTCACCTGTCGTCGTCATGCCGACTATGTTACAAAGAAGATAAAACCCGAACTGTTCACTATAAGAAAGGAATGTATTAATGGAAAGAGCTTCGGATGAGCAACATTTGTAGAGCAGCAAATTCCGCGCTAGTAGGATATTGTTCAATGCTTATTCTCTTTTGTATTTGCAATGCGTTGCGTCGGAACGATGATACACACACATACAATATAAAATATTAGGAACAACTGTTGTTATCCCGTAAAAGTATACTTTATTGTAAATAAGCACATAGGTTTCGATAATAATGATTTTGAATCGGTTAGCCGCGAGGTAACTTACTGCAAGGGAAATAATCATAAGTTTAGGTAGAATTGCATAACTGGAA]

[+] EMBL BM620241             [CCGCGGACGCGTGGGGTACTCTAATCCCCCAGGCTAGCGAAGTGTCACAGAAAGAGAGAATAGCGGACAACAGATCAACCATCTAGTGGGGAGCCAGTAAGAAAAGAAAAACGACAAGTAAAATGAAAGATTAACTCAAAAACACTGGCCCCAAAAAGAGCTATTCTTAAAACTAATCGTAACATGGGTTGATTAAGTATGTGAAAATCCGTTTTAGGATTGTTTTCCATTAATAACTTCTTGATATTGCGTGTGCGTGTATGTGTGCGAGTGTGTGTGTGTGTGTGTTTGTGCCCTCCGTTCCATAACACCTCACCTGTCGTCGTCATGCCGACTATGTTACAAAGAAGATAAAACCCGAACTGTTCACTATAAGAAAGGAATGTATTAATGGAAAGAGCTTCGGATGAGCAACATTTGTAGAGCAGCAAATTCCGCGCTAGTAGGATATTGTTCAATGCTTATTCTCTTTTGTATTTGCAATGCGTTGCGTCGGAACGATGATACACACACATACAATATAAAATATTAGGAACAACTGTTGTTATCCCGTAAAAGTATACTTTATTGTAAATAAGCACATAGGTTTCGATAATAATGATTTTGAATCGGTTAGCCGCGAGGTAACTTACTGCAAGGGAAATAATCATAAGTTTAGGTAGAATTGCATAACTGGAA]




>consensus_8773#3
CCGCGGACGCGTGGGGTACTCTAATCCCCCAGGCTAGCGAAGTGTCACAGAAAGAGAGAA
TAGCGGACAACAGATCAACCATCTAGTGGGGAGCCAGTAAGAAAAGAAAAACGACAAGTA
AAATGAAAGATTAACTCAAAAACACTGGCCCCAAAAAGAGCTATTCTTAAAACTAATCGT
AACATGGGTTGATTAAGTATGTGAAAATCCGTTTTAGGATTGTTTTCCATTAATAACTTC
TTGATATTGCGTGTGCGTGTATGTGTGCGAGTGTGTGTGTGTGTGTGTTTGTGCCCTCCG
TTCCATAACACCTCACCTGTCGTCGTCATGCCGACTATGTTACAAAGAAGATAAAACCCG
AACTGTTCACTATAAGAAAGGAATGTATTAATGGAAAGAGCTTCGGATGAGCAACATTTG
TAGAGCAGCAAATTCCGCGCTAGTAGGATATTGTTCAATGCTTATTCTCTTTTGTATTTG
CAATGCGTTGCGTCGGAACGATGATACACACACATACAATATAAAATATTAGGAACAACT
GTTGTTATCCCGTAAAAGTATACTTTATTGTAAATAAGCACATAGGTTTCGATAATAATG
ATTTTGAATCGGTTAGCCGCGAGGTAACTTACTGCAAGGGAAATAATCATAAGTTTAGGT
AGAATTGCATAACTGGAA

consensusID : consensus_8773#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 471
fasta sequence

                              [CAGAATCGCGCCGAGGTTAACCGAACTGTTCACTATAAGAAAGGATGTATTAATGGAAAGAGCTTCGGATGAGCAACATTTGTAGAGCAGCAAATTCCGCGCTAGTAGGATATTGTTCAATGCTTATTCTCTTTTGTATTTGCAATGCGTTGCGTCGGAACGATGATACACACACATACAATATAAAATATTAGGAACAACTGTTGTTATCCCGTAAAAGTATACTTTATTGTAAATAAGCACATAGGTTTCGATAATAATGATTTTGAATCGGTTAACCGCGAGGTAATTACTGCAAGGGAAATAATCATAAGTTTAGGTAGAATTGCATAACTGGAATTTGTACGCAGTTGTTTGTCTTTGGTATCCATGTAGCATCGGTCCTTATGTTTTTGTTCTGTACACCAACTTGTCAGTTTTGCATTTTATTTCCGTTAGTTTGTATATCGTCTGAAGTGGAAACATACAGAT]

[+] EMBL AL697073             [CAGAATCGCGCCGAGGTTAACCGAACTGTTCACTATAAGAAAGGATGTATTAATGGAAAGAGCTTCGGATGAGCAACATTTGTAGAGCAGCAAATTCCGCGCTAGTAGGATATTGTTCAATGCTTATTCTCTTTTGTATTTGCAATGCGTTGCGTCGGAACGATGATACACACACATACAATATAAAATATTAGGAACAACTGTTGTTATCCCGTAAAAGTATACTTTATTGTAAATAAGCACATAGGTTTCGATAATAATGATTTTGAATCGGTTAACCGCGAGGTAATTACTGCAAGGGAAATAATCATAAGTTTAGGTAGAATTGCATAACTGGAATTTGTACGCAGTTGTTTGTCTTTGGTATCCATGTAGCATCGGTCCTTATGTTTTTGTTCTGTACACCAACTTGTCAGTTTTGCATTTTATTTCCGTTAGTTTGTATATCGTCTGAAGTGGAAACATACAGAT]




>consensus_8773#4
CAGAATCGCGCCGAGGTTAACCGAACTGTTCACTATAAGAAAGGATGTATTAATGGAAAG
AGCTTCGGATGAGCAACATTTGTAGAGCAGCAAATTCCGCGCTAGTAGGATATTGTTCAA
TGCTTATTCTCTTTTGTATTTGCAATGCGTTGCGTCGGAACGATGATACACACACATACA
ATATAAAATATTAGGAACAACTGTTGTTATCCCGTAAAAGTATACTTTATTGTAAATAAG
CACATAGGTTTCGATAATAATGATTTTGAATCGGTTAACCGCGAGGTAATTACTGCAAGG
GAAATAATCATAAGTTTAGGTAGAATTGCATAACTGGAATTTGTACGCAGTTGTTTGTCT
TTGGTATCCATGTAGCATCGGTCCTTATGTTTTTGTTCTGTACACCAACTTGTCAGTTTT
GCATTTTATTTCCGTTAGTTTGTATATCGTCTGAAGTGGAAACATACAGAT

consensusID : consensus_8773#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 441
fasta sequence

                              [CCGCCCACGCGTCCGCCCACGCGTCCGGCGAAGTGTCACAGAAAGAGAGAATAGCGGACAACAGATCAACCATCTAGTGGGGAGCCAGTAAGAAAAGAAAAACGACAAGTAAAATGAAAGATTAACTCAAAAACACTGGCCCCAAAAAGAGCTATTCTTAAAACTAATCGTAACATGGGTTGATTAAGTATGTGAAAATCCGTTTTAGGATTGTTTTCCATCAATAACTTCTTGATATTGCGTGTGCGTGTATGTGTGCGAGTGTGTGTGTGTGTGTGTTTGTGCCCTCCGTTCCATAACACCTCACCTGTCGTCGTCATGCCGACTATGTTACAAAGAAGATAAAACCCGAACTGTTCACTATAAGAAAGGAATGTATTAATGGAAAGAGCTTCGGATGAGCAACATTTGTAGAGCAGCAAATTCCGCGCTAGTAGGATA]

[+] EMBL BM637760             [CCGCCCACGCGTCCGCCCACGCGTCCGGCGAAGTGTCACAGAAAGAGAGAATAGCGGACAACAGATCAACCATCTAGTGGGGAGCCAGTAAGAAAAGAAAAACGACAAGTAAAATGAAAGATTAACTCAAAAACACTGGCCCCAAAAAGAGCTATTCTTAAAACTAATCGTAACATGGGTTGATTAAGTATGTGAAAATCCGTTTTAGGATTGTTTTCCATCAATAACTTCTTGATATTGCGTGTGCGTGTATGTGTGCGAGTGTGTGTGTGTGTGTGTTTGTGCCCTCCGTTCCATAACACCTCACCTGTCGTCGTCATGCCGACTATGTTACAAAGAAGATAAAACCCGAACTGTTCACTATAAGAAAGGAATGTATTAATGGAAAGAGCTTCGGATGAGCAACATTTGTAGAGCAGCAAATTCCGCGCTAGTAGGATA]




>consensus_8773#5
CCGCCCACGCGTCCGCCCACGCGTCCGGCGAAGTGTCACAGAAAGAGAGAATAGCGGACA
ACAGATCAACCATCTAGTGGGGAGCCAGTAAGAAAAGAAAAACGACAAGTAAAATGAAAG
ATTAACTCAAAAACACTGGCCCCAAAAAGAGCTATTCTTAAAACTAATCGTAACATGGGT
TGATTAAGTATGTGAAAATCCGTTTTAGGATTGTTTTCCATCAATAACTTCTTGATATTG
CGTGTGCGTGTATGTGTGCGAGTGTGTGTGTGTGTGTGTTTGTGCCCTCCGTTCCATAAC
ACCTCACCTGTCGTCGTCATGCCGACTATGTTACAAAGAAGATAAAACCCGAACTGTTCA
CTATAAGAAAGGAATGTATTAATGGAAAGAGCTTCGGATGAGCAACATTTGTAGAGCAGC
AAATTCCGCGCTAGTAGGATA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8773#2      ------------------------------------------------------------
consensus_8773#4      ------------------------------------------------------------
consensus_8773#0      ------------------------------------------------------------
consensus_8773#1      ACGGAAGTAAATGTTTACCGCAAATAAAGGAAATAAATGTACTCTAATCCCCCAGGCTAG 60
consensus_8773#3      -----------------------CCGCGGACGCGTGGGGTACTCTAATCCCCCAGGCTAG 37
consensus_8773#5      -----------------------CCGCCCACGCGT---------CCGCCCACGCGTCCGG 28
                                                                                  

consensus_8773#2      ------------------------------------------------------------
consensus_8773#4      ------------------------------------------------------------
consensus_8773#0      ------------------------------------------------------------
consensus_8773#1      CGAAGTGTCACAGAAAGAGAGAATAGCGGACAACAGATCAACCATCTAGTGGGGAGCCAG 120
consensus_8773#3      CGAAGTGTCACAGAAAGAGAGAATAGCGGACAACAGATCAACCATCTAGTGGGGAGCCAG 97
consensus_8773#5      CGAAGTGTCACAGAAAGAGAGAATAGCGGACAACAGATCAACCATCTAGTGGGGAGCCAG 88
                                                                                  

consensus_8773#2      ----------------------------------TTTGAATGTGGTGCAGGCTCGGAAAA 26
consensus_8773#4      ------------------------------------------------------------
consensus_8773#0      --------GGCAAGAATCGGCACGAGGTGAAAGATTACTCAAAAACACTGGCCCCAAAAA 52
consensus_8773#1      TAAGAAAAGAAAAACAACAAGTAAATTGAAAGATTAGCTCAAAAACACTGGCCCCAAAAA 180
consensus_8773#3      TAAGAAAAGAAAAACGACAAGTAAAATGAAAGATTAACTCAAAAACACTGGCCCCAAAAA 157
consensus_8773#5      TAAGAAAAGAAAAACGACAAGTAAAATGAAAGATTAACTCAAAAACACTGGCCCCAAAAA 148
                                                                                  

consensus_8773#2      TCGATAGACCAGA--------GGGGCTTGATTCGGTTGAAACGCCTGGGACATGTCTGAG 78
consensus_8773#4      ------------------------------------------------------------
consensus_8773#0      GAGCTATTCTTAAAACTAATCGTAACATGGGTTGATTAAGTATGTGAAAATCCGTTTTAG 112
consensus_8773#1      GAGCTATTCTTAAAACTAATCGTAACATGGGTTGATTAAGTATGTGAAAATCCGTTTTAG 240
consensus_8773#3      GAGCTATTCTTAAAACTAATCGTAACATGGGTTGATTAAGTATGTGAAAATCCGTTTTAG 217
consensus_8773#5      GAGCTATTCTTAAAACTAATCGTAACATGGGTTGATTAAGTATGTGAAAATCCGTTTTAG 208
                                                                                  

consensus_8773#2      GCTTGG---CAGTGAGAAGTACACAAATATTGGGGGACCACGAGTAGACATGATGCAATA 135
consensus_8773#4      ------------------------------------------------------------
consensus_8773#0      GATTGTTTTCCATCAATAACTTCTTGATATTGCGTGTGCGTGTATGTGTGTGAGTGTGTG 172
consensus_8773#1      GATTGTTTTCCATCAATAACTTCTTGATATTGCGTGTGCGTATATGTGTGTGA----GTG 296
consensus_8773#3      GATTGTTTTCCATTAATAACTTCTTGATATTGCGTGTGCGTGTATGTGTGCGAGTGTGTG 277
consensus_8773#5      GATTGTTTTCCATCAATAACTTCTTGATATTGCGTGTGCGTGTATGTGTGCGAGTGTGTG 268
                                                                                  

consensus_8773#2      TGCG-----GTTATCGGCCACCGGGCCAAAGTGCTACAACT--CGTCGTCATGTCGACTA 188
consensus_8773#4      ---------------------------------------------------------CAG 3
consensus_8773#0      TGTGTGTGTGTTTGTGCCCTCCGTTCCATAACACCTCACCTGTCGTCGTCATGTCGACTA 232
consensus_8773#1      TGTG----TGTTTGTGCCCTCCGTTCCATAACACCTCACCTGTCGTCGTCATGCCGACTA 352
consensus_8773#3      TGTGTGTGTGTTTGTGCCCTCCGTTCCATAACACCTCACCTGTCGTCGTCATGCCGACTA 337
consensus_8773#5      TGTGTGTGTGTTTGTGCCCTCCGTTCCATAACACCTCACCTGTCGTCGTCATGCCGACTA 328
                                                                               *  

consensus_8773#2      TGTTACAAAGAAGATAAAACCCGAACTGTTCACTATAAGAAAGGAATGTATTAATGGAAA 248
consensus_8773#4      AATCGCGCCGAGGTTAA---CCGAACTGTTCACTATAAGAAAGGA-TGTATTAATGGAAA 59
consensus_8773#0      TGTTACAAAGAAGATAAAACCCGAACTGTTCACTATAAGAAAGGAATGTATTAATGGAAA 292
consensus_8773#1      TGTTACAAAGAAGATAAAACCCGAACTGTTCACTATAAGAAAGGAATGTATTAATGGAAA 412
consensus_8773#3      TGTTACAAAGAAGATAAAACCCGAACTGTTCACTATAAGAAAGGAATGTATTAATGGAAA 397
consensus_8773#5      TGTTACAAAGAAGATAAAACCCGAACTGTTCACTATAAGAAAGGAATGTATTAATGGAAA 388
                        *  *   ** * ***   ************************* **************

consensus_8773#2      GAGCTTCGGATGAGCAACATTTGTAGGGCAGCAAATTCCGCGCTAGTAGGATATTGTTT- 307
consensus_8773#4      GAGCTTCGGATGAGCAACATTTGTAGAGCAGCAAATTCCGCGCTAGTAGGATATTGTTC- 118
consensus_8773#0      GAGCTTCGGATGAGCAACATTTGTAGGGCAGCAAATTCCGCGCTAGTAGGATATTGTTTT 352
consensus_8773#1      GAGCTTCGGATGAGCAACATTTGTAGAGCAGCAAATTCCGCGCTAGTAGGATATTGTTC- 471
consensus_8773#3      GAGCTTCGGATGAGCAACATTTGTAGAGCAGCAAATTCCGCGCTAGTAGGATATTGTTCA 457
consensus_8773#5      GAGCTTCGGATGAGCAACATTTGTAGAGCAGCAAATTCCGCGCTAGTAGGATA------- 441
                      ************************** **************************       

consensus_8773#2      AATGCTTATTCTCTTTTGTATTTGCAATGCGTTGCGTCGGAACGATGATACACACACATA 367
consensus_8773#4      AATGCTTATTCTCTTTTGTATTTGCAATGCGTTGCGTCGGAACGATGATACACACACATA 178
consensus_8773#0      AATGCTTATTCTCTTTTGTATTTGCAATGCGTTGCGTCGGAACGATGATACACACACATA 412
consensus_8773#1      AATGCTTATTCTCTTTTGTATTTGCAATGCGTTGCGTCGGAACGATGATACACACACATA 531
consensus_8773#3      ATGCTTATTCTCTTTTGTATTTGCAATGCGTTGCGTCGGAACGATGATACACACACATAC 517
consensus_8773#5      ------------------------------------------------------------
                                                                                  

consensus_8773#2      CAATATAAAATATTAGGTACAACTGTTGTTATCCCGTAAAAGTATACTTTATTGTAAATA 427
consensus_8773#4      CAATATAAAATATTAGGAACAACTGTTGTTATCCCGTAAAAGTATACTTTATTGTAAATA 238
consensus_8773#0      CAATATAAAATATTAGGTACAACTGTTGTTATCCCGTAAAAGTATACTTTATTGTAAATA 472
consensus_8773#1      CAATATAAAATATTAGGAACAACTGTTGTTATCCCGTAAAAGTATACTTTATTGTAAATA 591
consensus_8773#3      AATATAAAATATTAGGAACAACTGTTGTTATCCCGTAAAAGTATACTTTATTGTAAATAA 577
consensus_8773#5      ------------------------------------------------------------
                                                                                  

consensus_8773#2      AGCACATAGGTTTCGATAATAATGATTTTGAATCGGTTAACCGCGAGGTAATTACTGCAA 487
consensus_8773#4      AGCACATAGGTTTCGATAATAATGATTTTGAATCGGTTAACCGCGAGGTAATTACTGCAA 298
consensus_8773#0      AGCACATAGGTTTCGATAATAATGATTTTGAATCGGTTAACCGCGAGGTAATTACTGCAA 532
consensus_8773#1      AGCACATAGGTTTCGATAATAATGATTTTGAATCGGTTAGCCGCGAGGTAATTACTGCAA 651
consensus_8773#3      GCACATAGGTTTCGATAATAATGATTTTGAATCGGTTAGCCGCGAGGTAACTTACTGCAA 637
consensus_8773#5      ------------------------------------------------------------
                                                                                  

consensus_8773#2      GGGAAATAATCATAAGTTTAGGTAGAATTGCATAACTGGAATTTGTACGCAGTTGTTTGT 547
consensus_8773#4      GGGAAATAATCATAAGTTTAGGTAGAATTGCATAACTGGAATTTGTACGCAGTTGTTTGT 358
consensus_8773#0      GGGAAATAATCATAAGTTTAGGTAGAATTGCATAACTGGAATTTGTACGCAGTTGTTTGT 592
consensus_8773#1      GGGAAATAATCATAAGTTTAGGTAGAATTGCATAACTGGAATTTGTACGCAGTTGTTTGT 711
consensus_8773#3      GGGAAATAATCATAAGTTTAGGTAGAATTGCATAACTGGAA------------------- 678
consensus_8773#5      ------------------------------------------------------------
                                                                                  

consensus_8773#2      CTTTGGTATCCATGTAGCATCGGTCCTTATGGTTTTGT-TCTGTACACCAACTTGTCAGT 606
consensus_8773#4      CTTTGGTATCCATGTAGCATCGGTCCTTATGTTTTTGT-TCTGTACACCAACTTGTCAGT 417
consensus_8773#0      CTTTGGTATCCATGTAGCATCGGTCCTTATGGTTTTGTGTCTGTACACCAACTTGTCAGT 652
consensus_8773#1      CTTTGGTATCCATGTAGCATCGGTCCTTATGTTTTTGN-TCTGTACACCAACTTGTCAGT 770
consensus_8773#3      ------------------------------------------------------------
consensus_8773#5      ------------------------------------------------------------
                                                                                  

consensus_8773#2      TTTGCATTTTATTTCCGTTAGTTTGTATATCGTCTGAAGTGAAAACATACAGATGTCATG 666
consensus_8773#4      TTTGCATTTTATTTCCGTTAGTTTGTATATCGTCTGAAGTGGAAACATACAGAT------ 471
consensus_8773#0      TTTGCATTTTATTTCCGTTAGTTTGTATATCGTCTGAAGTGAAAACATACAGATGTCATG 712
consensus_8773#1      TTTGCATTTTATTTCCGNTAGTTTGTATATCGTCTGAAGTGGAAACATACAGATGTCATG 830
consensus_8773#3      ------------------------------------------------------------
consensus_8773#5      ------------------------------------------------------------
                                                                                  

consensus_8773#2      AACATGATCAAATAGATAAAACCAGACAATTAACAACATGCTTAG--------------- 711
consensus_8773#4      ------------------------------------------------------------
consensus_8773#0      AACATGATCAAATAGATAAAACCAGACAATTAACAACATGCTTAGCAAAGACTAAAAAAA 772
consensus_8773#1      AACATGATCAAATAGATAAAACCAGACAATTAACAACATGCTTAGCAAAGACTAAAAAAA 890
consensus_8773#3      ------------------------------------------------------------
consensus_8773#5      ------------------------------------------------------------
                                                                                  

consensus_8773#2      ------------------------------------------------------------
consensus_8773#4      ------------------------------------------------------------
consensus_8773#0      AAATTCAAAACAATGAAAAACTCATGTTAGTAGCATTAGGTAATAGCAAAATCACTCGAA 832
consensus_8773#1      AAATTCAAAACAATGAAAAACTCATGTTAGTAGCATTAGGTAATAGCAAAATCAATCGAA 950
consensus_8773#3      ------------------------------------------------------------
consensus_8773#5      ------------------------------------------------------------
                                                                                  

consensus_8773#2      ------------------------------------------------------------
consensus_8773#4      ------------------------------------------------------------
consensus_8773#0      CAGAATGTGAACATACGAGAAGTTAAAAAAAAATCACACACACATACACACATTATAAAA 892
consensus_8773#1      CAGAATGTGAACATACACACATTATAAAATGTGAAAAAAATG------------------ 992
consensus_8773#3      ------------------------------------------------------------
consensus_8773#5      ------------------------------------------------------------
                                                                                  

consensus_8773#2      ------------------------------------------------------------
consensus_8773#4      ------------------------------------------------------------
consensus_8773#0      TGTGAAAAAAATGAAAACAAAAATCATTTACGCTTAAACATGAAAGGATTTAAACATATG 952
consensus_8773#1      ------------------------------------------------------------
consensus_8773#3      ------------------------------------------------------------
consensus_8773#5      ------------------------------------------------------------
                                                                                  

consensus_8773#2      ------------------------------------------------------------
consensus_8773#4      ------------------------------------------------------------
consensus_8773#0      CTAATTTAAAGACTAGTTTTTTTTTCTTCTCTCTCACACATTGTAATCCGGAGGAAGTGA 1012
consensus_8773#1      ------------------------------------------------------------
consensus_8773#3      ------------------------------------------------------------
consensus_8773#5      ------------------------------------------------------------
                                                                                  

consensus_8773#2      -------------------
consensus_8773#4      -------------------
consensus_8773#0      GTGTATAATGACTATGTAA 1031
consensus_8773#1      -------------------
consensus_8773#3      -------------------
consensus_8773#5      -------------------