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Anopheles gambiae
cluster # 8784 cluster # 8784       Sequences # 12       consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8784#0 length = 1881 sequences # 9  
consensus_8784#1 length = 691 sequences # 1  
 consensus_8784#2 length = 691 sequences # 1  
consensus_8784#3 length = 188 sequences # 1  
consensusID : consensus_8784#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 1881
fasta sequence 
                              [CCGCCCACGCGTCCG-GCCCGGACAGTGCCCGGAGTGATCGATCCATAGAAAATCGCCCATCATGTGCTACTGAAGCGAACCGGCGTAGCTTGTTCCGAATTTCCAAGTGCTTCCCCGTAACATTCGCATATAACAAGCAGCCCAACAATAAATACAGCATCAAGATGCTTGAGTTTGTCAGGCCGTTGCAGAGCATTCTGCAGATCAAGCAGGTCAACTCGACCGATCTCGTATGGCGGCTTCATTGTCGTGTGACGGTGTTTCTGCTACTGCTAGCGTCACTGTTGCTATCCGCCCGCCAATACTTTGGCAATCCGATCGACTGCGTGATCGGATCCGGCACGGTGTCCTCTTCGACGATGAACGAATTCTGCTGGATCATGGGCACCTACATTAGCAGCGATCCGAACTTCGTGTTGGATAGCACCGATTTGGTGAAGATCAATGCCAAGATTGGACACATCCCGGAGAGTGAGCGATCCTACCAGAAATACTACCAGTGGGTCGTGTTCATACTGGCGCTGCAGGCGTGCATGTTCTCGGTGCCCAACTTCCTGTGGAAGGCCTGGGAGGCCGGTCGTCTGCAATCACTGTGTGATGGTTTGACTACACCCATCCTTCCGGATCACTGGGAGAAGACACGCAAGAAGCAGCTGATCACTTACCTGTCGGCCGATTTCCCCCGCCTGCACCGCACGTACCTGCTGC-GGTATTGCTTCTGCACGCTGCTCAACTTCTGCAACGTGCTGCTGAACATCTTTCTCGTGAACGTGATCTTTTCCGGCTTCTGGTCGAACTACCATCCCGCCGTCAAGGCACTGCTGTCGTTCGATTTTCCCTCCTGGAACCGGTACAACTCGCAGGTGTTTCCGAAAATTGCCAAGTGTGATTTCCACTTCGTCGGGCCGAGCGGTTCCAAGCAAAACCGGGACGGACTGTGCCTGCTGCCGCTGAACGTGGTCAACGAGAAGATCTTTGCCTTCATCTGGCTGTGGTTCCTGGGGCTGCTGGTGATATCGATGCTGAATCTACTCTTCTGGATAGTGGTGCTGTGCAGCAAAAGCTTTCGCCTTTGGCTGCTTACCGCTCCACTGTACCCGATTCGTACGTCGTACGTCGTACGTGCGCTGGACGGTCAGGGCGTCGGACAGTGGTTCTTGCTTTATCAGCTGTGTCGCAATCTGAACCCGATCGTCGGCCGAGAGCTGGTCCAGAGTGTGTCGAAGGCGAAGGGACACAATGGTCACAAAACGTTCCGAATGCCGAAGGGTGGTGAACCGGACTTTTACACCGATCCGGAAGGATACGATGAGG-AAGG-CGTGTGA-GAGGACGGCGA-GAAGTAATCATATGTCCGCATTTTGCGCAAACCAGGCG-CTTAGACAATTTGCGCGTAAGCACATTCGAAATGTGAAAAGCTGAAAGCAGTGGTTTCGCCAGCCCGAGTTCAGCGAAAACGGATTCCTTTCCAAGTGGTTGCATTCCTGGCGGAGTGTTCCTCCC-AAAATGCACTCA-CCCTGCGTGCAGTGCCAAATCGTGAGTTTCCTAATTTTTTCATATTGTTTATTACCTACCAACTAAAGTTGTTGTTATATATTGCGTTTTACGTACGACAAATAAGTTCGTATTCAGAAATATTTGCGATAAGAGAGAACTCATTTGCGATGAATCTCATTGTATTTAGCTAAGTGCCTTGATAAGTAAGCGGAACAGCAGGAATATGACACTCCTTGGGAAATACATGTAAGCGTCTGTGAATTAGATATATATACACGCAACCAAATGGTCCATGGTTGATTTAAGCACTGCCTGTTGTCGAACATTGCTATAAGCAAAATAAAGAAGCATTCATTAATCTAAAATTCCAACANCAAGGCAGCATGT]

[+] EMBL BM606220             [CCGCCCACGCGTCCG GCCCGGACAGTGCCCGGAGTGATCGATCCATAGAAAATCGCCCATCATGTGCTACTGAAGCGAACCGGCGTAGCTTGTTCCGAATTTCCAAGTGCTTCCCCGTAACATTCGCATATAACAAGCAGCCCAACAATAAATACAGCATCAAGATGCTTGAGTTTGTCAGGCCGTTGCAGAGCATTCTGCAGATCAAGCAGGTCAACTCGACCGATCTCGTATGGCGGCTTCATTGTCGTGTGACGGTGTTTCTGCTACTGCTAGCGTCACTGTTGCTATCCGCCCGCCAATACTTTGGCAATCCGATCGACTGCGTGATCGGATCCGGCACGGTGTCCTCTTCGACGATGAACGAATTCTGCTGGATCATGGGCACCTACATTAGCAGCGATCCGAACTTCGTGTTGGATAGCACCGATTTGGTGAAGATCAATGCCAAGATTGGACACATCCCGGAGAGTGAGCGATCCTACCAGAAATACTACCAGTGGGTCGTGTTCATACTGGCGCTGCAGGCGTGCATGTTCTCGGTGCCCAACTTCCTGTGGAAGGCCTGGGAGGCCGGTCGTCTGCAATCACTGTGTGATGGTTTGACTACACCCATCCTTCCGGATCACTGGGAGAAGACACGCAAGAAGCAGCTGATCACTTACCTGTCGGGCGATTTCCCCCGCCTGCACCGCACGTACCTGCTGCGGGTATTGCTTCTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL BM616266             [            CCGCGCCCGGACAGTGCCCGGAGTGATCGATCCATAGAAAATCGCCCATCATGTGCTACTGAAGCGAACCGGCGTAGCTTGTTCCGAATTTCCAAGTGCTTCCCCGTAACATTCGCATATAACAAGCAGCCCAACAATAAATACAGCATCAAGATGCTTGAGTTTGTCAGGCCGTTGCAGAGCATTCTGCAGATCAAGCAGGTCAACTCGACCGATCTCGTATGGCGGCTTCATTGTCGTGTGACGGTGTTTCTGCTACTGCTAGCGTCACTGTTGCTATCCGCCCGCCAATACTTTGGCAATCCGATCGACTGCGTGATCGGATCCGGCACGGTGTCCTCTTCGACGATGAACGAATTCTGCTGGATCATGGGCACCTACATTAGCAGCGATCCGAACTTCGTGTTGGATAGCACCGATTTGGTGAAGATCAATGCCAAGATTGGACACATCCCGGAGAGTGAGCGATCCTACCAGAAATACTACCAGTGGGTCGTGTTCATACTGGCGCTGCAGGCGTGCATGTTCTCGGTGCCCAACTTCCTGTGGAAGGCCTGGGAGGCCGGTCGTCTGCAATCACTGTGTGATGGTTTGACTACACCCATCCTTCCGGATCACTGGGAGAAGACACGCAAGAAGCAGCTGATCACTTACCTGTCGGCCGATTTCCACCGCCTGCACCGCACGTACCTGCTGC GGTATTGCTTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL BM616752             [                    ccgCAGTGCCCGGAGTGATCGATCCATAGAAAATCGCCCATCATGTGCTACTGAAGCGAACCGGCGTAGCTTGTTCCGAATTTCCAAGTGCTTCCCCGTAACATTCGCATATAACAAGCAGCCCAACAATAAATACAGCATCAAGATGCTTGAGTTTGTCAGGCCGTTGCAGAGCATTCTGCAGATCAAGCAGGTCAACTCGACCGATCTCGTATGGCGGCTTCATTGTCGTGTGACGGTGTTTCTGCTACTGCTAGCGTCACTGTTGCTATCCGCCCGCCAATACTTTGGCAATCCGATCGACTGCGTGATCGGATCCGGCACGGTGTCCTCTTCGACGATGAACGAATTCTGCTGGATCATGGGCACCTACATTAGCAGCGATCCGAACTTCGTGTTGGATAGCACCGATTTGGTGAAGATCAATGCCAAGATTGGACACATCCCGGAGAGTGAGCGATCCTACCAGAAATACTACCAGTGGGTCGTGTTCATACTGGCGCTGCAGGCGTGCATGTTCTCGGTGCCCAACTTCCTGTGGAAGGCCTGGGAGGCCGGTCGTCTGCAATCACTGTGTGATGGTTTGACTACACCCATCCTTCCGGATCACTGGGAGAAGACACGCAAGAAGCAGCTGATCACTTACCTGTCGGCCGATTTCCCCCGCCTGCACCGCACGTACCTGCTGC GGTATTGCTTCTGCACGCTGCTCAACT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL BX622309             [                              CGGAGTGATCGATCCATAGAAAATCGCCCATCATGTGCCACTGAGGCGAACCGGCGTAGCTTGTTCCGAATTTCCAAGTGCTTCCCCGTAACATCCGCATATAACAAACAGCCCAACAACAAATACAGCATCGAGATGCTGGAGTTTGTAAGGCCGTTGCAGAGCATTCTGCAGATCAAGCAGGTCAACTCGACCGATCTCGTATGGCGGCTTCACTGTCGTGTGACGGTGTTCCTGCTGCTGCTAGCGTCACTATTGCTATCCGCCCGCCAATACTTTGGCAATCCGATCGACTGCGTGATCGGATCCGGCACGGTGTCCTCTTCGACGATGAACGAATTCTGCTGGATCATGGGAACCTACATTAGCAACGATCCGAACTTCGTGTTGGATAGCACCGATTTGGTGAAGATCAATGCCAAGATTGGACACATCCCGGAGAGTGAGCGATCCTACCAGAAATACTACCAGTGGGTCGTGTTCATACTGGCGCTGCAGGCGTGCATGTTCTCGGTGCCCAACTTCCTGTGGAAGGCCTGGGANGCCGGTCGTCTGCAATCACTGTGTGATGGTTTGACTACACCCATCCTTCCGGATCACTGGGAGAAGACACGCAAGAAGCAGCTGATCACTTACCTGTCGGNCGATTTNCCCCGCCTGCACCGCACGTACCTGCTGC GGTATTGCTTCTGCACGCTGCTCAACTTCTGCAACGTGCTGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL BM580007             [                               ccgGTGATCGATCCATAGAAAATCGTCCATCATGTGCCACTGAAGCGAACCGACGTAGCTTGTTCTGAATTTCCAAGTGCTTCCCCGTAACATTCGCATATAACAAGCAGCACAACAACAAATACAGCATCGAGATGCTGGAGTTTGTCAGGCCGTTGCAGAGCATTCTGCAGATCAAGCAGGTCAACTCGACCGATCTCATATGGCGGCTTCATTGTCGTGTGACGGTGTTTCTGCTACTGCTAGCGTCACTGTTGCTATCCGCCCGCCAATACTTTGGCAATCCGATCGACTGCGTGATCGGATCCGGCACGGTGTCCTCTTCGACGATGAACGAATTCTGCTGGATCATGGGCACCTACATTAGCAGCGATCCGAACTTCGTGTTGGATAGCACCGATTTGGTGAAGATCAATGCCAAGATTGGACACATCCCGGAGAGTGAGCGATCCTACCAGAAATACTACCAGTGGGTCGTGTTCATACTGGCGCTGCAGGCGTGCATGTTCTCGGTGCCCAACTTCCTGTGGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL BM579185             [                                             ccgGAAAATCGCCCATCATGTGCCACTGAGGCGAACCGGCGTAGCTTGTTCCGAATTTCCAAGTGCTTCCCCGTAACATCCGCATATAACAAACAGCCCAACAACAAATACAGCATCGAGATGCTGGAGTTTGTAAGGCCGTTGCAGAGCATTCTGCAGATCAAGCAGGTCAACTCGACCGATCTCGTATGGCGGCTTCACTGTCGTGTGACGGTGTTCCTGCTGCTGCTAGCGTCACTATTGCTATCCGCCCGCCAATACTTTGGCAATCCGATCGACTGCGTGATCGGATCCGGCACGGTGTCCTCTTCGACGATGAACGAATTCTGCTGGATCATGGGAACCTACATTAGCAACGATCCGAACTTCGTGTTGGATAGCACCGATTTGGTGAAGATCAATGCCAAGATTGGACACATCCCGGAGAGTGAGCGATCCTACCAGAAATACTACCAGTGGGTCGTGTTCATACTGGCGCTGCAGGCGTGCATGTTCTCGGTGCCCAACTTCCTGTGGAAGGCCTGGGAGGCCGGTCGTCTGCAATCACTGTGTGATGGTTTGACTACACCCATCCTTCCGGATCACTGGGAGAAGACACGCAAGAAGCAGCTGATCACTTACCTGTCGGCCGATTTCCCCCGCCTGCACCGCACGTACCTGCTGC GGTATTGCTTCTGCAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL BM601690             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ccgGGATAACTGGGAGAAGACACGCAAGAAGCAGCTGATCACTTACCTGTCGGCCGATTTCCCCCGCCTGCACCGCACGTACCTGCTGC GGTATTGTTTCTGCACGCTGCTCAACTTCTGCAACGTGCTGCTGAACATCTTTCTCGTGAACGTGATCTTTTCCGGCTTCTGGTCGAACTACCATCCCGCCGTCAAGGCACTGCTGTCGTTCGATTTTCCCTCCTGGAACCGGTACAACTCGCAGGTGTTTCCGAAAATTGCCAAGTGTGATTTCCACTTCGTCGGGCCGAGCGGTTCCAAGCAAAACCGGGACGGACTGTGCCTGCTGCCGCTGAACGTGGTCAACGAGAAGATCTTTGCCTTCATCTGGCTGTGGTTCCTGGGGCTGCTGGTGATATCGATGCTGAATCTACTCTTCTGGATAGTGGTGCTGTGCAGCAAAAGCTTTCGCCTTTGGCTGCTTACCGCTCCACTGTACCCGATTCGTACGTCGTACGTCGTACGTGCGCTGGACGGTCAGGGCGTCGGACAGTGGTTCTTGCTTTATCAGCTGTGTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL BX624680             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              CTGCTGC GGTATTGCTTCTGCACGCTGCTCAACTTCTGCAACGTGCTGCTGAACATCTTTCTCGTGAACGTGATCTTTTCCGGCTTCTGGTCGAACTACCATCCCGCCGTCAAGGCACTGCTGTCGTTCGATTTTCCCTCCTGGAACCGGTACAACTCGCAGGTGTTTCCGAAAATTGCCAAGTGTGATTTCCACTTCGTCGGGCCGAGCGGTTCGAAGCAAAACCGGGACGGACTGTGCCTGCTGCCGCTGAACGTGGTCAACGAGAAGATCTTTGCCTTCATCTGGCTGTGGTTCCTGGGGCTACTGGTGATATCGATGCTGAATCTACTCTTCTGGATAGTGGTGCTGTGCAGCAAAGGCTTTCGCCTTTGGCTGCTTACCGCTCCACTGTACCCGATTCGTACGTCCTACGTCGCACGTGCGCTGGACGGTCAGGGCGTCGGACAGTGGTTCTTGCTCTATCAGCTGTGTCGCAATCTGAACCCGATCGTCGGCCGAGAGCTGGTCCAGAGTGTGTCGAAGGCGAAGGGACACAATGGTCACAAAACGTTCCGAATGCCGAAGGGTGGTGAACCGGACTTTTACACCGATCCGGAAGGATACGATGAGG AAGG CGTGTGA GAGGACGGCGA GAAGTAATCATATGTCCGCATTTTGCGCAAACCAGGCG CTTAGACAATTTGCGCGTAAGCACATTCGAAATGTGAAAAGCTGAAAGCAGTGGTTTCGCCAGCCCGAGTTCAGCGAAAACGGATTCCTTTCCAAGTGGTTGCATTCCTGGCGGAGTGTTCCTCCC AAAATGCACTCA CCCTGCG                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL BX466743             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        atTACGATGAGGNACGGCCGTGTGACGAGGNCGGCGACGAAGTAATCATATGTCCGCATTTTGCGCAAACCAGGCGTCTTAGACAATTTGCGCGTAAGCACATTCGAAATGTGAAAAGCTGAAAGCAGTGGTTTCGCCAGCCCGAGTTCAGCG AAACGGATTCC TTCCAAGTGTTTGCATTCCTGGCGGAGTGTTCCTCCCGAAAATGCACTCACCCCTGCGTGCAGTGCCAAATCGTGAGTTTCCTAATTTTTTCATATTGTTTATTACCTACCAACTAAAGTTGTTGTTATATATTGCGTTTTACGTACGACAAATAAGTTCGTATTCAGAAATATTTGCGATAAGAGAGAACTCATTTGCGATGAATCTCATTGTATTTAGCTAAGTGCCTTGATAAGTAAGCGGAACAGCAGGAATATGACACTCCTTGGGAAATACATGTAAGCGTCTGTGAATTAGATATATATACACGCAACCAAATGGTCCATGGTTGATTTAAGCACTGCCTGTTGTCGAACATTGCTATAAGCAAAATAAAGAAGCATTCATTAATCTAAAATTCCAACANCAAGGCAGCATGT]




>consensus_8784#0
CCGCCCACGCGTCCGGCCCGGACAGTGCCCGGAGTGATCGATCCATAGAAAATCGCCCAT
CATGTGCTACTGAAGCGAACCGGCGTAGCTTGTTCCGAATTTCCAAGTGCTTCCCCGTAA
CATTCGCATATAACAAGCAGCCCAACAATAAATACAGCATCAAGATGCTTGAGTTTGTCA
GGCCGTTGCAGAGCATTCTGCAGATCAAGCAGGTCAACTCGACCGATCTCGTATGGCGGC
TTCATTGTCGTGTGACGGTGTTTCTGCTACTGCTAGCGTCACTGTTGCTATCCGCCCGCC
AATACTTTGGCAATCCGATCGACTGCGTGATCGGATCCGGCACGGTGTCCTCTTCGACGA
TGAACGAATTCTGCTGGATCATGGGCACCTACATTAGCAGCGATCCGAACTTCGTGTTGG
ATAGCACCGATTTGGTGAAGATCAATGCCAAGATTGGACACATCCCGGAGAGTGAGCGAT
CCTACCAGAAATACTACCAGTGGGTCGTGTTCATACTGGCGCTGCAGGCGTGCATGTTCT
CGGTGCCCAACTTCCTGTGGAAGGCCTGGGAGGCCGGTCGTCTGCAATCACTGTGTGATG
GTTTGACTACACCCATCCTTCCGGATCACTGGGAGAAGACACGCAAGAAGCAGCTGATCA
CTTACCTGTCGGCCGATTTCCCCCGCCTGCACCGCACGTACCTGCTGCGGTATTGCTTCT
GCACGCTGCTCAACTTCTGCAACGTGCTGCTGAACATCTTTCTCGTGAACGTGATCTTTT
CCGGCTTCTGGTCGAACTACCATCCCGCCGTCAAGGCACTGCTGTCGTTCGATTTTCCCT
CCTGGAACCGGTACAACTCGCAGGTGTTTCCGAAAATTGCCAAGTGTGATTTCCACTTCG
TCGGGCCGAGCGGTTCCAAGCAAAACCGGGACGGACTGTGCCTGCTGCCGCTGAACGTGG
TCAACGAGAAGATCTTTGCCTTCATCTGGCTGTGGTTCCTGGGGCTGCTGGTGATATCGA
TGCTGAATCTACTCTTCTGGATAGTGGTGCTGTGCAGCAAAAGCTTTCGCCTTTGGCTGC
TTACCGCTCCACTGTACCCGATTCGTACGTCGTACGTCGTACGTGCGCTGGACGGTCAGG
GCGTCGGACAGTGGTTCTTGCTTTATCAGCTGTGTCGCAATCTGAACCCGATCGTCGGCC
GAGAGCTGGTCCAGAGTGTGTCGAAGGCGAAGGGACACAATGGTCACAAAACGTTCCGAA
TGCCGAAGGGTGGTGAACCGGACTTTTACACCGATCCGGAAGGATACGATGAGGAAGGCG
TGTGAGAGGACGGCGAGAAGTAATCATATGTCCGCATTTTGCGCAAACCAGGCGCTTAGA
CAATTTGCGCGTAAGCACATTCGAAATGTGAAAAGCTGAAAGCAGTGGTTTCGCCAGCCC
GAGTTCAGCGAAAACGGATTCCTTTCCAAGTGGTTGCATTCCTGGCGGAGTGTTCCTCCC
AAAATGCACTCACCCTGCGTGCAGTGCCAAATCGTGAGTTTCCTAATTTTTTCATATTGT
TTATTACCTACCAACTAAAGTTGTTGTTATATATTGCGTTTTACGTACGACAAATAAGTT
CGTATTCAGAAATATTTGCGATAAGAGAGAACTCATTTGCGATGAATCTCATTGTATTTA
GCTAAGTGCCTTGATAAGTAAGCGGAACAGCAGGAATATGACACTCCTTGGGAAATACAT
GTAAGCGTCTGTGAATTAGATATATATACACGCAACCAAATGGTCCATGGTTGATTTAAG
CACTGCCTGTTGTCGAACATTGCTATAAGCAAAATAAAGAAGCATTCATTAATCTAAAAT
TCCAACANCAAGGCAGCATGT

consensusID : consensus_8784#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 691
fasta sequence 
                              [CCGGAGAATACCGCCCGGACAGTGCCCGGAGTGATCGATCCATAGAAAATCGCCCATCATGTGCTACTGAAGCGAACCGGCGTAGCTTGTTCCGAATTTCCAAGTGCTTCCCCGTAACATTCGCATATAACAAGCAGCCCAACAATAAATACAGCATCAAGATGCTTGAGTTTGTCAGGCCGTTGCAGAGCATTCTGCAGATCAAGCAGGTCAACTCGACCGATCTCGTATGGCGGCTTCATTGTCGTGTGACGGTGTTTCTGCTACTGCTAGCGTCACTGTTGCTATCCGCCCGCCAATACTTTGGCAATCCGATCGACTGCGTGATCGGATCCGGCACGGTGTCCTCTTCGACGATGAACGAATTCTGCTGGATCATGGGCACCTACATTAGCAGCGATCCGAACTTCGTGTTGGATAGCACCGATTTGGTGAAGATCAATGCCAAGATTGGACACATCCCGGAGAGTGAGCGATCCTACCAGAAATACTACCAGTGGGTCGTGTTCATACTGGCGCTGCAGGCGTGCATGTTCTCGGTGCCCAACTTTCCTGTGGAAGGCCTGGGAAGGCCGGTCGTCTGCAATCACTGTGTGATGGTTTGACTACACCCATCCTTCCGGATCACTGGGAGAAGACACGCAAGAAGCAGCTGATCACTTACCTGTCGGACGATTTCCCCCGCCTGCAC]

[+] EMBL BM595700             [CCGGAGAATACCGCCCGGACAGTGCCCGGAGTGATCGATCCATAGAAAATCGCCCATCATGTGCTACTGAAGCGAACCGGCGTAGCTTGTTCCGAATTTCCAAGTGCTTCCCCGTAACATTCGCATATAACAAGCAGCCCAACAATAAATACAGCATCAAGATGCTTGAGTTTGTCAGGCCGTTGCAGAGCATTCTGCAGATCAAGCAGGTCAACTCGACCGATCTCGTATGGCGGCTTCATTGTCGTGTGACGGTGTTTCTGCTACTGCTAGCGTCACTGTTGCTATCCGCCCGCCAATACTTTGGCAATCCGATCGACTGCGTGATCGGATCCGGCACGGTGTCCTCTTCGACGATGAACGAATTCTGCTGGATCATGGGCACCTACATTAGCAGCGATCCGAACTTCGTGTTGGATAGCACCGATTTGGTGAAGATCAATGCCAAGATTGGACACATCCCGGAGAGTGAGCGATCCTACCAGAAATACTACCAGTGGGTCGTGTTCATACTGGCGCTGCAGGCGTGCATGTTCTCGGTGCCCAACTTTCCTGTGGAAGGCCTGGGAAGGCCGGTCGTCTGCAATCACTGTGTGATGGTTTGACTACACCCATCCTTCCGGATCACTGGGAGAAGACACGCAAGAAGCAGCTGATCACTTACCTGTCGGACGATTTCCCCCGCCTGCAC]




>consensus_8784#1
CCGGAGAATACCGCCCGGACAGTGCCCGGAGTGATCGATCCATAGAAAATCGCCCATCAT
GTGCTACTGAAGCGAACCGGCGTAGCTTGTTCCGAATTTCCAAGTGCTTCCCCGTAACAT
TCGCATATAACAAGCAGCCCAACAATAAATACAGCATCAAGATGCTTGAGTTTGTCAGGC
CGTTGCAGAGCATTCTGCAGATCAAGCAGGTCAACTCGACCGATCTCGTATGGCGGCTTC
ATTGTCGTGTGACGGTGTTTCTGCTACTGCTAGCGTCACTGTTGCTATCCGCCCGCCAAT
ACTTTGGCAATCCGATCGACTGCGTGATCGGATCCGGCACGGTGTCCTCTTCGACGATGA
ACGAATTCTGCTGGATCATGGGCACCTACATTAGCAGCGATCCGAACTTCGTGTTGGATA
GCACCGATTTGGTGAAGATCAATGCCAAGATTGGACACATCCCGGAGAGTGAGCGATCCT
ACCAGAAATACTACCAGTGGGTCGTGTTCATACTGGCGCTGCAGGCGTGCATGTTCTCGG
TGCCCAACTTTCCTGTGGAAGGCCTGGGAAGGCCGGTCGTCTGCAATCACTGTGTGATGG
TTTGACTACACCCATCCTTCCGGATCACTGGGAGAAGACACGCAAGAAGCAGCTGATCAC
TTACCTGTCGGACGATTTCCCCCGCCTGCAC

consensusID : consensus_8784#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 691
fasta sequence 
                              [GGCAGAATCGGCACGTAGGCGAACTACATCCCGCCGTCAAGGCACTGCTGTCGTTCGATTTTCCCTCCTGGAACCGGTACAACTCGCAGGTGTTTCCGAAAATTGCCAAGTGTGATTTCCACTTCGTCGGGCCGAGCGGTTCGAAGCAAAACCGGGACGGACTGTGCCTGCTGCCGCTGAACGTGGTCAACGAGAAGATCTTTGCCTTCATCTGGCTGTGGTTCCTGGGGCTACTGGTGATATCGATGCTGAATCTACTCTTCTGGATAGTGGTGCTGTGCAGCAAAGGCTTTCGCCTTTGGCTGCTTACCGCTCCACTGTACCCGATTCGTACGTCCTACGTCGCACGTGCGCTGGACGGTCATGGCGTCGGACAGTGGTTCTTGCTCTATCAGCTGTGTCGCAATCTGAACCCGATCGTCGGCCGAGAGCTGGTCCAGAGTGTGTCGAACGGCGCAAGGGACACAATGGTCACAAAACGTTCCGNAATGCCGAANGGTGGTGAACCGGACTTTNAGCAGCGATCCGGAAGGATACCGATGACGGAAAGGCGTGTGAGCAGGACGGGCCGAAAGAAAGGTCAATCCAGTATTGTTCCCGGCGATTTTATGGCCGGCCNANAGCCAAGGCGGACTTTTAAGGACCAGCTCNTGGCGCACGTTTANNACGGGGTCACGCNNNATTTATCCNG]

[+] EMBL BX468361             [GGCAGAATCGGCACGTAGGCGAACTACATCCCGCCGTCAAGGCACTGCTGTCGTTCGATTTTCCCTCCTGGAACCGGTACAACTCGCAGGTGTTTCCGAAAATTGCCAAGTGTGATTTCCACTTCGTCGGGCCGAGCGGTTCGAAGCAAAACCGGGACGGACTGTGCCTGCTGCCGCTGAACGTGGTCAACGAGAAGATCTTTGCCTTCATCTGGCTGTGGTTCCTGGGGCTACTGGTGATATCGATGCTGAATCTACTCTTCTGGATAGTGGTGCTGTGCAGCAAAGGCTTTCGCCTTTGGCTGCTTACCGCTCCACTGTACCCGATTCGTACGTCCTACGTCGCACGTGCGCTGGACGGTCATGGCGTCGGACAGTGGTTCTTGCTCTATCAGCTGTGTCGCAATCTGAACCCGATCGTCGGCCGAGAGCTGGTCCAGAGTGTGTCGAACGGCGCAAGGGACACAATGGTCACAAAACGTTCCGNAATGCCGAANGGTGGTGAACCGGACTTTNAGCAGCGATCCGGAAGGATACCGATGACGGAAAGGCGTGTGAGCAGGACGGGCCGAAAGAAAGGTCAATCCAGTATTGTTCCCGGCGATTTTATGGCCGGCCNANAGCCAAGGCGGACTTTTAAGGACCAGCTCNTGGCGCACGTTTANNACGGGGTCACGCNNNATTTATCCNG]




>consensus_8784#2
GGCAGAATCGGCACGTAGGCGAACTACATCCCGCCGTCAAGGCACTGCTGTCGTTCGATT
TTCCCTCCTGGAACCGGTACAACTCGCAGGTGTTTCCGAAAATTGCCAAGTGTGATTTCC
ACTTCGTCGGGCCGAGCGGTTCGAAGCAAAACCGGGACGGACTGTGCCTGCTGCCGCTGA
ACGTGGTCAACGAGAAGATCTTTGCCTTCATCTGGCTGTGGTTCCTGGGGCTACTGGTGA
TATCGATGCTGAATCTACTCTTCTGGATAGTGGTGCTGTGCAGCAAAGGCTTTCGCCTTT
GGCTGCTTACCGCTCCACTGTACCCGATTCGTACGTCCTACGTCGCACGTGCGCTGGACG
GTCATGGCGTCGGACAGTGGTTCTTGCTCTATCAGCTGTGTCGCAATCTGAACCCGATCG
TCGGCCGAGAGCTGGTCCAGAGTGTGTCGAACGGCGCAAGGGACACAATGGTCACAAAAC
GTTCCGNAATGCCGAANGGTGGTGAACCGGACTTTNAGCAGCGATCCGGAAGGATACCGA
TGACGGAAAGGCGTGTGAGCAGGACGGGCCGAAAGAAAGGTCAATCCAGTATTGTTCCCG
GCGATTTTATGGCCGGCCNANAGCCAAGGCGGACTTTTAAGGACCAGCTCNTGGCGCACG
TTTANNACGGGGTCACGCNNNATTTATCCNG

consensusID : consensus_8784#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 188
fasta sequence 
                              [AATTCTGAGCAGAATCTGGCACGAGGCGTACTACATCCCGCCGTCATGCACCTGCTGTCGTTCGAGTTTCCCTCCTGTGGAACGGGTACAAACTCGCAGGTTTTTCCGAAAATTGCAAGTGTATTTCCACTTCGGTCGGGCCGAGCGGTTCGAAGCAAAAACGGGACGGACTGTGGCCTGCTGCGGTA]

[+] EMBL BX469719             [AATTCTGAGCAGAATCTGGCACGAGGCGTACTACATCCCGCCGTCATGCACCTGCTGTCGTTCGAGTTTCCCTCCTGTGGAACGGGTACAAACTCGCAGGTTTTTCCGAAAATTGCAAGTGTATTTCCACTTCGGTCGGGCCGAGCGGTTCGAAGCAAAAACGGGACGGACTGTGGCCTGCTGCGGTA]




>consensus_8784#3
AATTCTGAGCAGAATCTGGCACGAGGCGTACTACATCCCGCCGTCATGCACCTGCTGTCG
TTCGAGTTTCCCTCCTGTGGAACGGGTACAAACTCGCAGGTTTTTCCGAAAATTGCAAGT
GTATTTCCACTTCGGTCGGGCCGAGCGGTTCGAAGCAAAAACGGGACGGACTGTGGCCTG
CTGCGGTA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8784#2      ------------------------------------------------------------
consensus_8784#3      ------------------------------------------------------------
consensus_8784#0      CCGCCCACGCGTCCGGCCCGGACAGTGCCCGGAGTGATCGATCCATAGAAAATCGCCCAT 60
consensus_8784#1      ------------------------------------------------------------
                                                                                  

consensus_8784#2      ------------------------------------------------------------
consensus_8784#3      ------------------------------------------------------------
consensus_8784#0      CATGTGCTACTGAAGCGAACCGGCGTAGCTTGTTCCGAATTTCCAAGTGCTTCCCCGTAA 120
consensus_8784#1      ------------------------------------------------------------
                                                                                  

consensus_8784#2      ------------------------------------------------------------
consensus_8784#3      ------------------------------------------------------------
consensus_8784#0      CATTCGCATATAACAAGCAGCCCAACAATAAATACAGCATCAAGATGCTTGAGTTTGTCA 180
consensus_8784#1      ------------------------------------------------------------
                                                                                  

consensus_8784#2      ------------------------------------------------------------
consensus_8784#3      ------------------------------------------------------------
consensus_8784#0      GGCCGTTGCAGAGCATTCTGCAGATCAAGCAGGTCAACTCGACCGATCTCGTATGGCGGC 240
consensus_8784#1      ------------------------------------------------------------
                                                                                  

consensus_8784#2      ------------------------------------------------------------
consensus_8784#3      ------------------------------------------------------------
consensus_8784#0      TTCATTGTCGTGTGACGGTGTTTCTGCTACTGCTAGCGTCACTGTTGCTATCCGCCCGCC 300
consensus_8784#1      ------------------------------------------------------------
                                                                                  

consensus_8784#2      ------------------------------------------------------------
consensus_8784#3      ------------------------------------------------------------
consensus_8784#0      AATACTTTGGCAATCCGATCGACTGCGTGATCGGATCCGGCACGGTGTCCTCTTCGACGA 360
consensus_8784#1      ------------------------------------------------------------
                                                                                  

consensus_8784#2      ------------------------------------------------------------
consensus_8784#3      ------------------------------------------------------------
consensus_8784#0      TGAACGAATTCTGCTGGATCATGGGCACCTACATTAGCAGCGATCCGAACTTCGTGTTGG 420
consensus_8784#1      ------------------------------------------------------------
                                                                                  

consensus_8784#2      ------------------------------------------------------------
consensus_8784#3      ------------------------------------------------------------
consensus_8784#0      ATAGCACCGATTTGGTGAAGATCAATGCCAAGATTGGACACATCCCGGAGAGTGAGCGAT 480
consensus_8784#1      ------------------------------------------------------------
                                                                                  

consensus_8784#2      ------------------------------------------------------------
consensus_8784#3      ------------------------------------------------------------
consensus_8784#0      CCTACCAGAAATACTACCAGTGGGTCGTGTTCATACTGGCGCTGCAGGCGTGCATGTTCT 540
consensus_8784#1      ------------------------------------------------------------
                                                                                  

consensus_8784#2      ------------------------------------------------------------
consensus_8784#3      ------------------------------------------------------------
consensus_8784#0      CGGTGCCCAACTTCCTGTGGAAGGCCTGGGAGGCCGGTCGTCTGCAATCACTGTGTGATG 600
consensus_8784#1      ------------------------------------------------------------
                                                                                  

consensus_8784#2      ------------------------------------------------------------
consensus_8784#3      ------------------------------------------------------------
consensus_8784#0      GTTTGACTACACCCATCCTTCCGGATCACTGGGAGAAGACACGCAAGAAGCAGCTGATCA 660
consensus_8784#1      ------------------------------------------------------------
                                                                                  

consensus_8784#2      ------------------------------------------------------------
consensus_8784#3      ------------------------------------------------------------
consensus_8784#0      CTTACCTGTCGGCCGATTTCCCCCGCCTGCACCGCACGTACCTGCTGCGGTATTGCTTCT 720
consensus_8784#1      ------------------------------------------------------------
                                                                                  

consensus_8784#2      -----------------------------------------------GGCAGAATC---- 9
consensus_8784#3      ----------------------------------------AATTCTGAGCAGAATCT--- 17
consensus_8784#0      GCACGCTGCTCAACTTCTGCAACGTGCTGCTGAACATCTTTCTCGTGAACGTGATCTTTT 780
consensus_8784#1      ----------------------------------------------CCGGAGAATACCGC 14
                                                                           **     

consensus_8784#2      --GGCACGTAGGCGAACTAC-ATCCCGCCGTCAAGGCACTGCTGTCGTTCGATTTTCCCT 66
consensus_8784#3      --GGCACG-AGGCGTACTAC-ATCCCGCCGTCATGCACCTGCTGTCGTTCGAGTTTCCCT 73
consensus_8784#0      CCGGCTTCTGGTCGAACTACCATCCCGCCGTCAAGGCACTGCTGTCGTTCGATTTTCCCT 840
consensus_8784#1      CCGGACAGTGCCCGGAGTG--ATCGATCCATAGAAAATCGCCCATCATGTGCTACTGAAG 72
                        **        ** * *   ***   ** *       *  *  ** *  *    *    

consensus_8784#2      CCTG--GAACCGGTACAA-CTCGCAGGTGTTTCCGAAAATTGCCAAGTGTGATTTCCACT 123
consensus_8784#3      CCTGTGGAACGGGTACAAACTCGCAGGTTTTTCCGAAAATTGC-AAGTGT-ATTTCCACT 131
consensus_8784#0      CCTG--GAACCGGTACAA-CTCGCAGGTGTTTCCGAAAATTGCCAAGTGTGATTTCCACT 897
consensus_8784#1      C-----GAACCGGCGTAGCTTGTTCCGAATTTCCAAGTGCTTCCCCGTAACATTCGCATA 127
                      *     **** **   *   *     *  ***** *    * *   **   ***  **  

consensus_8784#2      TCG-TCG-GGCCGAGCGGTTCGAAGCAAAACCGGGACG---GACTGTG-CCTGCTGCCGC 177
consensus_8784#3      TCGGTCG-GGCCGAGCGGTTCGAAGCAAAAACGGGACG---GACTGTGGCCTGCTGCGGT 187
consensus_8784#0      TCG-TCG-GGCCGAGCGGTTCCAAGCAAAACCGGGACG---GACTGTG-CCTGCTGCCGC 951
consensus_8784#1      TAACAAGCAGCCCAACAATA-AATACAGCATCAAGATGCTTGAGTTTGTCAGGCCGTTGC 186
                      *     *  *** * *  *   *  **  * *  ** *   ** * ** *  ** *  * 

consensus_8784#2      TGAACGTGGTCAA---CGAGAAGATCTTTGCCTTCATCTGGCTGTGGTTCCTGGGGCTAC 234
consensus_8784#3      A----------------------------------------------------------- 188
consensus_8784#0      TGAACGTGGTCAA---CGAGAAGATCTTTGCCTTCATCTGGCTGTGGTTCCTGGGGCTGC 1008
consensus_8784#1      AGAGCATTCTGCAGATCAAGCAGGTCAACTCGACCGATCTCGTATGGCGGCTTCATTGTC 246
                                                                                  

consensus_8784#2      TGGTGATATCGATGCTGAATCTACTCTTCTGGATAGTGGTGCTGTGCAGCAAAGGCTTTC 294
consensus_8784#3      ------------------------------------------------------------
consensus_8784#0      TGGTGATATCGATGCTGAATCTACTCTTCTGGATAGTGGTGCTGTGCAGCAAAAGCTTTC 1068
consensus_8784#1      GTGTGACGGTGTTTCTGCTACTGCTAGCGTCACTGTTGCTATCCGCCCGCCAATACTTTG 306
                                                                                  

consensus_8784#2      GCCTTTGGCT--GCTTACCGCTCCACTGTACCCGATTCGTACGTCCTACGTCGCACGTGC 352
consensus_8784#3      ------------------------------------------------------------
consensus_8784#0      GCCTTTGGCT--GCTTACCGCTCCACTGTACCCGATTCGTACGTCGTACGTCGTACGTGC 1126
consensus_8784#1      GCAATCCGATCGACTGCGTGATCGGATCCGGCACGGTGTCCTCTTCGACGATGAACGAAT 366
                                                                                  

consensus_8784#2      GCTGGACGGTCATGGCGTCGGACAGTGGTTCTTGCTCTATCAGCTGTGTCGCAATCTGAA 412
consensus_8784#3      ------------------------------------------------------------
consensus_8784#0      GCTGGACGGTCAGGGCGTCGGACAGTGGTTCTTGCTTTATCAGCTGTGTCGCAATCTGAA 1186
consensus_8784#1      TCTGCTGGATCATGGGCACCTACATTAGCAGCGATCCGAACTTC-GTGTTGGA---TAGC 422
                                                                                  

consensus_8784#2      CCCGATCGTCGGCCGAGAGCTGGTCCAGAGTGTGTCGAACGGCGCAAGGGACACAATGGT 472
consensus_8784#3      ------------------------------------------------------------
consensus_8784#0      CCCGATCGTCGGCCGAGAGCTGGTCCAGAGTGTGTCGAA-GGCG-AAGGGACACAATGGT 1244
consensus_8784#1      ACCGAT--TTGGTGAAGATCAATGCCAAGATTGGACACATCCCGGAGAGTGAGCGATCCT 480
                                                                                  

consensus_8784#2      CACAAAACGTTCCGNAATGCCGAANGGTGGTGAACCGGACTTTNAGCAGCGATCCGGAAG 532
consensus_8784#3      ------------------------------------------------------------
consensus_8784#0      CACAAAACGTTCCGAA-TGCCGAAGGGTGGTGAACCGGACTTTTA-CACCGATCCGGAAG 1302
consensus_8784#1      ACCAGAA------ATACTACCAGTGGGTCGTGTTCATA--CTGGCGCTGCAGGCGTGCAT 532
                                                                                  

consensus_8784#2      GATACCGATGACGGAAAGGCGTGTGAGCAGGACGGGCCGAAAGAA-AGGTCAATCCAGTA 591
consensus_8784#3      ------------------------------------------------------------
consensus_8784#0      GATAC-GATGAGGAAGGCGTGTGAGAGGACGGCGAGAAGTAATCATATGTCCGCATTTTG 1361
consensus_8784#1      GTTCTCGGTGCCCAACTTTCCTGTGGAAGGCCTGGGAAGGCCGGTCGTCTGCAATCACTG 592
                                                                                  

consensus_8784#2      T-TGTT--CCCGGCGATTTTATGGCCGGCCNANAGCCA-AGGCGGACTTTTAAGGACCAG 647
consensus_8784#3      ------------------------------------------------------------
consensus_8784#0      CGCAAA--CCAGGCGCTTAGACAATTTGCGCGTAAGCACATTCGAAATGTGAAAAGCTGA 1419
consensus_8784#1      TGTGATGGTTTGACTACACCCATCCTTCCGGATCACTGGGAGAAGACACGCAAGAAGCAG 652
                                                                                  

consensus_8784#2      CTCNTGGCGCACGTTTANNACGGGGTCACGCNNNATTTATCCNG---------------- 691
consensus_8784#3      ------------------------------------------------------------
consensus_8784#0      AAGCAGTGGTTTCGCCAGCCCGAGTTCAGCGAAAACGGATTCCTTTCCAAGTGGTTGCAT 1479
consensus_8784#1      CTGATCACTTACCTGTCGGACGATTTCCCCCGCCTGCAC--------------------- 691
                                                                                  

consensus_8784#2      ------------------------------------------------------------
consensus_8784#3      ------------------------------------------------------------
consensus_8784#0      TCCTGGCGGAGTGTTCCTCCCAAAATGCACTCACCCTGCGTGCAGTGCCAAATCGTGAGT 1539
consensus_8784#1      ------------------------------------------------------------
                                                                                  

consensus_8784#2      ------------------------------------------------------------
consensus_8784#3      ------------------------------------------------------------
consensus_8784#0      TTCCTAATTTTTTCATATTGTTTATTACCTACCAACTAAAGTTGTTGTTATATATTGCGT 1599
consensus_8784#1      ------------------------------------------------------------
                                                                                  

consensus_8784#2      ------------------------------------------------------------
consensus_8784#3      ------------------------------------------------------------
consensus_8784#0      TTTACGTACGACAAATAAGTTCGTATTCAGAAATATTTGCGATAAGAGAGAACTCATTTG 1659
consensus_8784#1      ------------------------------------------------------------
                                                                                  

consensus_8784#2      ------------------------------------------------------------
consensus_8784#3      ------------------------------------------------------------
consensus_8784#0      CGATGAATCTCATTGTATTTAGCTAAGTGCCTTGATAAGTAAGCGGAACAGCAGGAATAT 1719
consensus_8784#1      ------------------------------------------------------------
                                                                                  

consensus_8784#2      ------------------------------------------------------------
consensus_8784#3      ------------------------------------------------------------
consensus_8784#0      GACACTCCTTGGGAAATACATGTAAGCGTCTGTGAATTAGATATATATACACGCAACCAA 1779
consensus_8784#1      ------------------------------------------------------------
                                                                                  

consensus_8784#2      ------------------------------------------------------------
consensus_8784#3      ------------------------------------------------------------
consensus_8784#0      ATGGTCCATGGTTGATTTAAGCACTGCCTGTTGTCGAACATTGCTATAAGCAAAATAAAG 1839
consensus_8784#1      ------------------------------------------------------------
                                                                                  

consensus_8784#2      ------------------------------------------
consensus_8784#3      ------------------------------------------
consensus_8784#0      AAGCATTCATTAATCTAAAATTCCAACANCAAGGCAGCATGT 1881
consensus_8784#1      ------------------------------------------


Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)