cluster # 8850

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Anopheles gambiae
cluster # 8850 cluster # 8850 Sequences # 12 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8850#0 length = 1153 sequences # 8
consensus_8850#1 length = 818 sequences # 2

consensus_8850#2 length = 475 sequences # 1
consensus_8850#3 length = 463 sequences # 1

consensusID : consensus_8850#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1153
fasta sequence

                              [ACAAAATAAAATAATTGCCGCACACAGGAAAGTTTGAAGCGCAAAACTCCTGCGGGGGGAATAAATCGAAGAGCGTACCTGTGCCTGCTGGTGGATGAGTATTACGAAACGTCCAACTTAGAAGCGCAACAGCAAGTGACTGCCAATTTAGCAAACTTTGCGTACGATCCGATCAATTGGACGTTTCTGCGCGAAGAAAAGCACACGAGCTGTTTTACGATATCGTTCAGCAGTCGACGGGAAGCGTAGTGG-ACCGGCTGCTTCTTTTGCATGCAATCGTTGGGCTGGCAAACATTTGCCTC-GATCCAGCGATTGCAGAATTTATCGAGCGAAG-AACGGATACGATCAGCTTAGAGCGCTGCTG-GAGAAATATCAAACCGACTGTGAGATTGCTTGCAACGCGCT--AACGTGCTATTCTTTCCTGCTTAATGACTCCAGCACTGACCAGTTGAAGAAGGACAAAAGGTTGGTGCGTTTGTTAGAACGTTTTAAGCAGTCAGGAAATCCACGAATTGCCAATATTGCTACCGTACTTGTGGCCGATCTTCAGTAGCACTATGCACGGGCC-AAAGCTAGTGCGATGGATGAGCGCCACAAGCGCCCGAGT-GCAACCTACGGTAGGGAC-GGTGTT-CCGTTTGACGAGAACATTCCGCGAGACCGATGTTAAACAGTTTGTCGCTCTAACCGGTGACAGCAATCCAATCCACGTGTCGAC-GACGAACGACTGTGAGCGCAAAGAGCAGCTGTTCGTGAATGGAGCCTTCCTGAAC-GGCGTCATTGCGGGCATCATTGGTTCCAACTTTCCCGGTTTTGTGGTGACGACGCAGAACTTTCGCTTCCCAAACCGGTGCCAGCTAGACAAGGAGGTGCAGTTCAGTGTCACGGTGGAGGAAATGCGGAAAATCGTAACTGTTTCGTACGAAAGCAAACAAAGCGATCGCGTTGTTTTCGAGGGCATTGCGAAACTGTTTGCGGTGCGGAAATGAAAACACAGTTAGCGTAAAATAACAATGTGAATGCTACTTTTTTGCTGAATGAAGCATCTGCGAAGGGAGCATATTGCAGGAATGATGTAACGGCCAG---A--T-GTACTGGATACTGGCTTGAAGTGGACTATTTTAGGTAGTTTAATCAAACAAACAACAATAAAGTATGT]

[+] EMBL CNS08RR3             [ACAAAATAAAATAATTGCCGCACACAGGAAAGTTTGAAGCGCAAAACTCCTGCGGGGGGAATAAATCGAAGAGCGTACCTGTGCCTGCTGGTGGATGAGTATTACGAAACGTCCAACTTAGAAGCGCAACAGCAAGTGACTGCCAATTTAGCAAACTTTGCGTACGATCCGATCAATTGGACGTTTCTGCGCG ACAAAAGCACACGAGCTGTTTTACGATATCGTTCAGCAGTCGACGGGAAGCGTAGTGG ACCGGCTGCTTCTTTTGCATGCAATCGTTGGGCTGGCAAACATTTGCCTCAGATCCAGCGATTGCAGAATTTATCGAGCGAAC AACGGATACGATCAGCTTAGAGCGCTGCTGAGAGAAATATCAAACCGACTGTGAGAATGCTTGCAACGCGCT  AACGTGCTATTCTTTCCTGCTTAATGACTCCAGCACTGACCAGTTGAAGAAGGACAAAAGGTTGGTGCGTTTGTAAGAACGTTTTAAGCAGTCAGGAAATCCACGAATTGCCAATATTGCTACCGTACTTGTGGCCGATCTTCAGTAGCACTATGCACGGGCC AAAGCTAGTGCGATGGATGAGCGCCACAAGCGCCCGAGT GCAACCTACGGTAGGGAC GGTGTT CCGTTTGACGAGAACATT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CNS08G23             [   AAATAAAATAATTGCCGCACACAGGAAAGTTTGAAGCGCAAAACTCCTGCGGGGGGAATAAATCGAAGAGCGTACCTGTGCCTGCTGGTGGATGAGTATTACGAAACGTCCAACTTAGAAGCGCAACAGCAAGTGACTGCCAATTTAGCAAACTTTGCGTACGATCCGATCAATTGGACGTTTCTGCGCGAAGAAAAGCACACGAGCTGTTTTACGATATCGTTCAGCAGTCGACGGGAAGCGTAGTGG ACCGGCTGCTTCTTTTGCATGCAATCGTTGGGCTGGCAAACATTTGCCTC GATCCAGCGATTGCAGAATTTATCGAGCGAAG AACGGATACGATCAGCTTAGAGCGCTGCTG GAGAAATATCAAACCGACTGTGAGATTGCTTGCAACGCGCT  AACGTGCTATTCTTTCCTGCTTAATGACTCCAGCACTGACCAGTTGAAGAAGGACAAAAGGTTGGTGCGTTTGTTAGAACGTTTTAAGCAGTCAGGAAATCCACGAATTGCCAATATTGCTACCGTACTTGTGGCCGATCTTCAGTAGCACTATGCACGGGCC AAAGCTAGTGCGATGGATGAGCGCCACAAGCGCCCGAGT GCAACCTACGGTAGGGAC GGTGTT CCGTTTGACGAGAACATTCCGCGAGACCGATGTTAAACAGTTTGTCGCTCTAACCGGTGACAGCAATCCAATCCACGTGTCGAC GACGAACGACTGTTAGCGCAAAGAGCAGCTGTTCGTGAATGGAGCCTTCCTGAAC GGCGTCATTGCGGGCATCATTGGTTCCAACTTTCCCGGTTTCGTGGTGACGACGCAGAACTTTCGCTTCCCAAACCGGTGCCAGCTAGACAAGGAGGTGCAGTTCAGTGTCACGG                                                                                                                                                                                                                                                                                  ]
[+] EMBL CNS09GWC             [      TAAAATAATTGCCGCACACAGGAACGTTTGAAGCGCAAAACTCCTGCGGGAGGAATAAATCGAAGAGCGTACCTGTGCCTGCTGGTAGATGAGTATTACGAAACGTCCAACTTAGAAGCGCAACAGCAAGTGACTGCCAATTTAGCGAACTTTGCGTACGATCCGATTAATTGGACATTTCTGCGCGAAGAAAAGCACACGAGCTGTTTTACGATATTGTGCAGCAGTCCACGGGAAGCGTAGTGGCACCGGCTGCTTCTTTTGCATGCAATCGTTGGACTGGCAAACATTTCCCTC GATCCAGCGATTGCAGAATTTATCGAGCGAAG AACGGATACGACCCACTGAGAGCACTGCTG GAGAAATATCAAACCGACTGTGAGATTGTTTGCAACGCGCT  AACGTGCTATTCTTTCCTGCTGAATGGCACCAGCACTGACCAGTTGAAGAAGGACAAAGGTTTGGTGCATTTGTTAGAACGATTTAAGCAGTCAGAAAATCCACGAATTGCCAATCTTGCTACCGTACTTGTGGCCGATCTTCAGTAGCACTATGCACGGGCC AAGGCTAGTGCGATGGATGAGCGCCACAAGCGCCCGAGT GCAACCTACGGTAGGGAC GGTGTT CCGTTTGACGAGAACATTTCGCGAGACCGATGTTAAACAATTTGTCGCTCTAACCGGTGACAGCAATCCAATCCACGTGTCGAC GACGAACGACGGTGCGCGCAAAGAGCAGCTGTTCGTGAATGGAGCCTTCCTGAAC GGCGTCATTGCGGGCATCATTGGTTCCAACTTTCCCGGTTTTGTGGTGACGACGCAGAACTTTCGCTTCCCAAACCGGTGCCAGCTAGACAAGGAGGTGCAGTTCAGTGTCACGGTGGAGGA                                                                                                                                                                                                                                                                           ]
[-] EMBL CNS09AE1             [                                                                                                                                                                                                                                                                                                                         ATTGCAGAATTTATCGAGCGAAGCAACGGATACGACCAGCTGAGAGCGCTGCTG GAGAAATATCAAACCGACTGTGAGATTGTTTGCAACGCGCT  GACGTGCTATTCTTTCCTGCTAAATGACACCAGAACTGACCAGTTGAAGAAGGACAAAGGTTTGGTGCATTTGTTAGAACGTTTTAAGCGGTCAGGAAATCCACGAATTGCCAATCTTGCTACCGTACTTGTGGCCGATCTTCAGTAGCGCTATGCACGGGCT AAAGCTAGTGCGATGGATGAGCGCCACAAGCGCCCGAGT GCAA CTACGGTAGGGAC GGTGTT CCGTTTGACGAGAACATTCCGCGAGACCGATGTTAAACAGTTTGTCGCTCTAACCGGTGACAGCAATCCAATCCACGTGTCGACGGACGAACGACGGTGAGTGCAAAGAGCAGCTGTTCGTGAATGGAGCCTTCCTGAACGGGCGTCATTGCGGGCATCATTGGTTCCAACTTTCCCGGTTTTGTGGTGACGACGCAGAACTTTCGCTTCCCAAACCGGTGCCAGCTAGACAAGGAGGTGCAGTTCAGCGTCACGGTGGAGGAAATGCGGAAAATCGTAACTGTTTCGTACGAAAGCAAACAAAGCGATCGCGTTGTTTTCGAGGGCATTGCGAAACTGTTTGCGGTGCGGAAATGAAAACACAGTTAGCGTAAAATAACAATGTGAATGCTACTTTTTTGCTGAATGAAGCATCTGCGAAGGGAGCATATTGCAGGAATGATGTAACGGCCAG   A  T GTACTGGATACTGGCTTGAAGTGGACTATTTTAGGTAGTTTAATCAAACAAACAACAATAAA      ]
[+] EMBL BX619991             [                                                                                                                                                                                                                                                                                                                                                                                                    TGAGATTGCTTGCAACGCGCTNNTACGTGCTATTCTTTCCTGCTTAATGACTCCAGCACTGACCAGTTGAAGAAGGACAAAAGGTTGGTGCGTTTGTTAGAACGTTTTAAGCAGTCAGGAAATCCACGAATTGCCAATATTGCTACCGTACTTGTGGCCGATCTTCAGTAGCACTATGCACGGGCCAAAAGCTAGTGCGATGGATGAGCGCCACAAGCGCCCGAGT GCAACCTACGGTAGGGACGGGTGTTCCCGTTTGACGAGAACNTTCCGCGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CNS08G24             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               CCCGAGTGGCAA CTACGGTAGGGAC GGTGTT CCGTTTGACGAGAACATTCCGCGAGACCGATGTTAAACAGTTTGTCGCTCTAACCGGTAACAGAAATCCAATCCACGTGTCGAC GACGAACAACTGTGAGCGCAAAGAGCAGCTGTTCGTGAATGGAGCCTTCCTGAAC GGCGTCATTGCGGGCATAATTGGTTCCAATTTTCCCGGTTTCGTGGTGACGACGCAGAATTTTCGCTTCCCAAACCGGTGCCAGCTAGACAAGGAGGTGCAGTTAAGTGTCACGGTGGAGGAAATGCGGAAAATTGTAACTGTTTCGTACGAAAGCAAAC                                                                                                                                                                                                                                     ]
[-] EMBL CNS096X9             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       CGTGAATGGAGCCTTCCT AAA AACGTCATTGCGGGCATCATTGGTTCCAACTTTCCCGGTTTTGTGGTGACGACGCAGAACTTTCGCTTCCCAAACCGGTGCCAGCTAGACAAGGAGGTGCAGTTCAGCGTCACGGTGGAGGAAATGCGGAAAATCGTAACTGTTTCGTACGAAAGCAAACAAAGCGATCGCGTTGTTTTCGAGGGCATTGCGAAACTGTTTGCGGTGCGGAAATGAAAACACAGTTAGCGTAAAATAACAATGTGAATGCTACTTTTTTGCTGAATGAAGCATCTGCGAAGGGAGCATATTGCAGGAATGATGTAACGGCCAG   A  T GTACTGGATACTGGCTTGAAGTGGACTATTTTAGGTAGTTTAATCAAACAAACAACAATAAAGTA   ]
[-] EMBL CNS09GWD             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TTGTGGTGACGACGCAGAACTTTCGCTTCCCAAACCGGTGCCAGCTAGACAAGGAGGTGCAGTTCAGTGTCACGGTGGAGGAAATGCGGAAAATCGTAACTGTTTCGTACGAAAGCAAACAAAGCGATCGCGTTGTTTTCGAGGGCATTGCGAAACTGTTTGCGGTGCGGAAATGAAAACACAGTTAGCGAAAAATAACAATCTTAATGCTATTATTTTGCTGAATGAAGCATCTGCGAAGGAAACATATTGCAGGAATGATGTAACGGCCAGTACAGCTAGCACTGTATACTGGCTTGAAGTGGACTATTTTAGGTAGTTTAATCAAACAAACAACAATAAAGTATGT]




>consensus_8850#0
ACAAAATAAAATAATTGCCGCACACAGGAAAGTTTGAAGCGCAAAACTCCTGCGGGGGGA
ATAAATCGAAGAGCGTACCTGTGCCTGCTGGTGGATGAGTATTACGAAACGTCCAACTTA
GAAGCGCAACAGCAAGTGACTGCCAATTTAGCAAACTTTGCGTACGATCCGATCAATTGG
ACGTTTCTGCGCGAAGAAAAGCACACGAGCTGTTTTACGATATCGTTCAGCAGTCGACGG
GAAGCGTAGTGGACCGGCTGCTTCTTTTGCATGCAATCGTTGGGCTGGCAAACATTTGCC
TCGATCCAGCGATTGCAGAATTTATCGAGCGAAGAACGGATACGATCAGCTTAGAGCGCT
GCTGGAGAAATATCAAACCGACTGTGAGATTGCTTGCAACGCGCTAACGTGCTATTCTTT
CCTGCTTAATGACTCCAGCACTGACCAGTTGAAGAAGGACAAAAGGTTGGTGCGTTTGTT
AGAACGTTTTAAGCAGTCAGGAAATCCACGAATTGCCAATATTGCTACCGTACTTGTGGC
CGATCTTCAGTAGCACTATGCACGGGCCAAAGCTAGTGCGATGGATGAGCGCCACAAGCG
CCCGAGTGCAACCTACGGTAGGGACGGTGTTCCGTTTGACGAGAACATTCCGCGAGACCG
ATGTTAAACAGTTTGTCGCTCTAACCGGTGACAGCAATCCAATCCACGTGTCGACGACGA
ACGACTGTGAGCGCAAAGAGCAGCTGTTCGTGAATGGAGCCTTCCTGAACGGCGTCATTG
CGGGCATCATTGGTTCCAACTTTCCCGGTTTTGTGGTGACGACGCAGAACTTTCGCTTCC
CAAACCGGTGCCAGCTAGACAAGGAGGTGCAGTTCAGTGTCACGGTGGAGGAAATGCGGA
AAATCGTAACTGTTTCGTACGAAAGCAAACAAAGCGATCGCGTTGTTTTCGAGGGCATTG
CGAAACTGTTTGCGGTGCGGAAATGAAAACACAGTTAGCGTAAAATAACAATGTGAATGC
TACTTTTTTGCTGAATGAAGCATCTGCGAAGGGAGCATATTGCAGGAATGATGTAACGGC
CAGATGTACTGGATACTGGCTTGAAGTGGACTATTTTAGGTAGTTTAATCAAACAAACAA
CAATAAAGTATGT

consensusID : consensus_8850#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 818
fasta sequence

                              [GCCGAACAAAATAAAATAATTGCCGGTACGATTTCGCTCGGATATCAGCATTAAAGGTTTTCGTTAAATCATTATACCTTCCCTTTCGAAATGTTCAGCACACAGGAACGTTTGAAGCGCAAAACTCCTGCGGGAGGAATAAATCGAAGAGCGTACCTGTGCCTGCTGGTAGATGAGTATTACGAAACGTCCAACTTAGAAGCGCAACAGCAAGTGACTGCCAATTTAGCGAACTTTGCGTACGATCCGATTAATTGGACATTTCTGCGCGAACAAAAGCACACGAACTGTTTTACGATATCGTTCAGCAGTCCACGGGAAGCGTAGT-GGACCGGCTGCTTCTTTTGCATGCAATCGTTGGACTGGCAAACATTTCCCTTTTTTCAGCGATTGCAGAATTTATCGAGCGAAGAACCGGATACGACCAGCTGAGAGCGCTGCTGGAGAAACTATCAAACCGACTGTGAGATTGTTTGCAACGCGCTGACGTGCTATTCTTTCCTGCTAAATGACACCAGCACTGACCAGTTGAAGAAGGACAAAGGTTTGGTGCATTTGTTAGAACGTTTTAAGCGGTCAGGAAATCCACGAATTGCCAATCTTGCTACCGTACTTGTGGCCGATCTTCAGTAGCGCTATGCACGGGCTAAAGCTAGTGCGATGGATGAGCGCCACAAGCGCCCGAGTGCAACCTACGGTAGGGACGGTGTTCCGTTTGACGAGAACATTCCGCGAGACCGATGTTAAACAGTTTGTCGCTCTAACCGGTGACAGCAATCCAATCCACGTGTCGACGACGAACGACGGTGAGTGCAAAG]

[+] EMBL CNS096X8             [GCCGAACAAAATAAAATAATTGCCGGTACGATTTCGCTCGGATATCAGCATTAAAGGTTTTCGTTAAATCATTATACCTTCCCTTTCGAAATGTTCAGCACACAGGAACGTTTGAAGCGCAAAACTCCTGCGGGAGGAATAAATCGAAGAGCGTACCTGTGCCTGCTGGTAGATGAGTATTACGAAACGTCCAACTTAGAAGCGCAACAGCAAGTGACTGCCAATTTAGCGAACTTTGCGTACGATCCGATTAATTGGACATTTCTGCGCGAACAAAAGCACACGAACTGTTTTACGATATCGTTCAGCAGTCCACGGGAAGCGTAGT GGACCGGCTGCTTCTTTTGCATGCAATCGTTGGACTGGCAAACATTTCCCTTTTTTCAGCGATTGCAGAATTTATCGAGCGAAGAACCGGATACGACCAGCTGAGAGCGCTGCTGGAGAAACTATCAAAC                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CNS09AE0             [   GAACAAAATAAAATAATTGCCGGTACGATTTCGCTCGGATATCAGCATTAAAGGTTTTCGTTAAATCATTATACCTTCCCTTTCGAAATGTTCAGCACACAGGAACGTTTGAAGCGCAAAACTCCTGCGGGAGGAATAAATCGAAGAGCGTACCTGTGCCTGCTGGTAGATGAGTATTACGAAACGTCCAACTTAGAAGCGCAACAGCAAGTGACTGCCAATTTAGCGAACTTTGCGTACGATCCGATTAATTGGACATTTCTGCGCGAACAAAAGCACACGAACTGTTTTACGATATCGTTCAGCAGTCCACGGGAAGCGTAGTGGGACCGGCTGCTTCTTTTGCATGCAATCGTTGGACTGGCAAACATTTCCCTCGATCCAGCGATTGCAGAATTTATCGAGCGAAGAA CGGATACGACCAGCTGAGAGCGCTGCTGGAGAAA TATCAAACCGACTGTGAGATTGTTTGCAACGCGCTGACGTGCTATTCTTTCCTGCTAAATGACACCAGCACTGACCAGTTGAAGAAGGACAAAGGTTTGGTGCATTTGTTAGAACGTTTTAAGCGGTCAGGAAATCCACGAATTGCCAATCTTGCTACCGTACTTGTGGCCGATCTTCAGTAGCGCTATGCACGGGCTAAAGCTAGTGCGATGGATGAGCGCCACAAGCGCCCGAGTGCAACCTACGGTAGGGACGGTGTTCCGTTTGACGAGAACATTCCGCGAGACCGATGTTAAACAGTTTGTCGCTCTAACCGGTGACAGCAATCCAATCCACGTGTCGACGACGAACGACGGTGAGTGCAAAG]




>consensus_8850#1
GCCGAACAAAATAAAATAATTGCCGGTACGATTTCGCTCGGATATCAGCATTAAAGGTTT
TCGTTAAATCATTATACCTTCCCTTTCGAAATGTTCAGCACACAGGAACGTTTGAAGCGC
AAAACTCCTGCGGGAGGAATAAATCGAAGAGCGTACCTGTGCCTGCTGGTAGATGAGTAT
TACGAAACGTCCAACTTAGAAGCGCAACAGCAAGTGACTGCCAATTTAGCGAACTTTGCG
TACGATCCGATTAATTGGACATTTCTGCGCGAACAAAAGCACACGAACTGTTTTACGATA
TCGTTCAGCAGTCCACGGGAAGCGTAGTGGACCGGCTGCTTCTTTTGCATGCAATCGTTG
GACTGGCAAACATTTCCCTTTTTTCAGCGATTGCAGAATTTATCGAGCGAAGAACCGGAT
ACGACCAGCTGAGAGCGCTGCTGGAGAAACTATCAAACCGACTGTGAGATTGTTTGCAAC
GCGCTGACGTGCTATTCTTTCCTGCTAAATGACACCAGCACTGACCAGTTGAAGAAGGAC
AAAGGTTTGGTGCATTTGTTAGAACGTTTTAAGCGGTCAGGAAATCCACGAATTGCCAAT
CTTGCTACCGTACTTGTGGCCGATCTTCAGTAGCGCTATGCACGGGCTAAAGCTAGTGCG
ATGGATGAGCGCCACAAGCGCCCGAGTGCAACCTACGGTAGGGACGGTGTTCCGTTTGAC
GAGAACATTCCGCGAGACCGATGTTAAACAGTTTGTCGCTCTAACCGGTGACAGCAATCC
AATCCACGTGTCGACGACGAACGACGGTGAGTGCAAAG

consensusID : consensus_8850#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 475
fasta sequence

                              [AGAATNGCCCGAGGTTNTGCATTTGTTAGAACGTTTTAAGCGGTCAGGAAATCCACGAATTGCCAATCTTGCTACCTGTACTTGTGGCCGATCTTCAGTAGCACTATGCACTGGGCCAAAGCTAGTGCGATGGATGAGCTGCCACAAGCGCCCGAGTGCAATCCTACGGTAGGGACGGTGTTCCNGTTTGACTGAGAACATTCCTGCGATGACCTGATGTTAAACAATTTTGTCGCTCTAACCTGGTGACAGCAATCCAATCCACAGTGTCAACGACGAACGACTGTGAGCGCAAAGAGCAGCTGTTCGTGAATGGAGCCTTCCTGAACGGCGTCATTGCGGGCATCATTGGTTCCAACTTTCCCGGTTATCGTGGTGACGANGCAAGAACTTTCGCTTCCCGAACCGGTGCCAGCTAGACANAGGAGTGTGCAGTTCAGCGTCACGGTNGGAGGNAATGCGGAAAATCGTAACT]

[+] EMBL AL930814             [AGAATNGCCCGAGGTTNTGCATTTGTTAGAACGTTTTAAGCGGTCAGGAAATCCACGAATTGCCAATCTTGCTACCTGTACTTGTGGCCGATCTTCAGTAGCACTATGCACTGGGCCAAAGCTAGTGCGATGGATGAGCTGCCACAAGCGCCCGAGTGCAATCCTACGGTAGGGACGGTGTTCCNGTTTGACTGAGAACATTCCTGCGATGACCTGATGTTAAACAATTTTGTCGCTCTAACCTGGTGACAGCAATCCAATCCACAGTGTCAACGACGAACGACTGTGAGCGCAAAGAGCAGCTGTTCGTGAATGGAGCCTTCCTGAACGGCGTCATTGCGGGCATCATTGGTTCCAACTTTCCCGGTTATCGTGGTGACGANGCAAGAACTTTCGCTTCCCGAACCGGTGCCAGCTAGACANAGGAGTGTGCAGTTCAGCGTCACGGTNGGAGGNAATGCGGAAAATCGTAACT]




>consensus_8850#2
AGAATNGCCCGAGGTTNTGCATTTGTTAGAACGTTTTAAGCGGTCAGGAAATCCACGAAT
TGCCAATCTTGCTACCTGTACTTGTGGCCGATCTTCAGTAGCACTATGCACTGGGCCAAA
GCTAGTGCGATGGATGAGCTGCCACAAGCGCCCGAGTGCAATCCTACGGTAGGGACGGTG
TTCCNGTTTGACTGAGAACATTCCTGCGATGACCTGATGTTAAACAATTTTGTCGCTCTA
ACCTGGTGACAGCAATCCAATCCACAGTGTCAACGACGAACGACTGTGAGCGCAAAGAGC
AGCTGTTCGTGAATGGAGCCTTCCTGAACGGCGTCATTGCGGGCATCATTGGTTCCAACT
TTCCCGGTTATCGTGGTGACGANGCAAGAACTTTCGCTTCCCGAACCGGTGCCAGCTAGA
CANAGGAGTGTGCAGTTCAGCGTCACGGTNGGAGGNAATGCGGAAAATCGTAACT

consensusID : consensus_8850#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 463
fasta sequence

                              [AATGCCCGAGGNTCACAGGAACGGTTTGAAGCGCAAACTCCTGCGGGAGGAATAAATCGAAGAGCGTACCTGTGCCTGCTGGTGGATGAGTATTACGAAACGTCCAACTTAGAAGCGCAACAGCAAGTGACTGCCAATTTAGCAAACTTTGCGTACGATCCGATCAATTGGACGTTTCTGCGCCAAGCAAAAGCACACGAGCTGTTTTACGATATCGTTCAGCAGTCCACGGGAAGCGTAGTGGACCGGCTGCTTCTTTTGCATGCAATCGTTGGACTGGCAAACATTTCCCTCGATCCAGCGATTGCAGAATTTATCGAGCGAAGCAACGGATACGACCAGCTTAGAGCGCTGCTGGAGAAATATCAAACCGACTGTGAGATTGTTTGCAACGCGCTAACGTGTTCATTCTTTCCTGCTGAATGACACCAGCACTGACCAGTTGAAGAAGGACAAAGGTTTG]

[+] EMBL AL931829             [AATGCCCGAGGNTCACAGGAACGGTTTGAAGCGCAAACTCCTGCGGGAGGAATAAATCGAAGAGCGTACCTGTGCCTGCTGGTGGATGAGTATTACGAAACGTCCAACTTAGAAGCGCAACAGCAAGTGACTGCCAATTTAGCAAACTTTGCGTACGATCCGATCAATTGGACGTTTCTGCGCCAAGCAAAAGCACACGAGCTGTTTTACGATATCGTTCAGCAGTCCACGGGAAGCGTAGTGGACCGGCTGCTTCTTTTGCATGCAATCGTTGGACTGGCAAACATTTCCCTCGATCCAGCGATTGCAGAATTTATCGAGCGAAGCAACGGATACGACCAGCTTAGAGCGCTGCTGGAGAAATATCAAACCGACTGTGAGATTGTTTGCAACGCGCTAACGTGTTCATTCTTTCCTGCTGAATGACACCAGCACTGACCAGTTGAAGAAGGACAAAGGTTTG]




>consensus_8850#3
AATGCCCGAGGNTCACAGGAACGGTTTGAAGCGCAAACTCCTGCGGGAGGAATAAATCGA
AGAGCGTACCTGTGCCTGCTGGTGGATGAGTATTACGAAACGTCCAACTTAGAAGCGCAA
CAGCAAGTGACTGCCAATTTAGCAAACTTTGCGTACGATCCGATCAATTGGACGTTTCTG
CGCCAAGCAAAAGCACACGAGCTGTTTTACGATATCGTTCAGCAGTCCACGGGAAGCGTA
GTGGACCGGCTGCTTCTTTTGCATGCAATCGTTGGACTGGCAAACATTTCCCTCGATCCA
GCGATTGCAGAATTTATCGAGCGAAGCAACGGATACGACCAGCTTAGAGCGCTGCTGGAG
AAATATCAAACCGACTGTGAGATTGTTTGCAACGCGCTAACGTGTTCATTCTTTCCTGCT
GAATGACACCAGCACTGACCAGTTGAAGAAGGACAAAGGTTTG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8850#1      GCCGAACAAAATAAAATAATTGCCGGTACGATTTCGCTCGGATATCAGCATTAAAGGTTT 60
consensus_8850#3      ------------------------------------------------------------
consensus_8850#0      ------------------------------------------------------------
consensus_8850#2      ------------------------------------------------------------
                                                                                  

consensus_8850#1      TCGTTAAATCATTATACCTTCCCTTTCGAAATGTTCA--GCACACAGGAACG-TTTGAAG 117
consensus_8850#3      -----------------------------AATGCCCGAGGNTCACAGGAACGGTTTGAAG 31
consensus_8850#0      --------------------ACAAAATAAAATAATTGCCGCACACAGGAAAG-TTTGAAG 39
consensus_8850#2      ---------------------------AGAATNGCCCGAGGTTNTGCATTTGTTAGAACG 33
                                                   ***       *           * *   * *

consensus_8850#1      CGCAAAACTCCTGCGGGAGGAATAAATCGAAGAGCGT---ACCTGTGCCTGCTGGTAGA- 173
consensus_8850#3      CGCAAA-CTCCTGCGGGAGGAATAAATCGAAGAGCGT---ACCTGTGCCTGCTGGTGGA- 86
consensus_8850#0      CGCAAAACTCCTGCGGGGGGAATAAATCGAAGAGCGT---ACCTGTGCCTGCTGGTGGA- 95
consensus_8850#2      TTTTAAGCGGTCAGGAAATCCACGAATTGCCAATCTTGCTACCTGTACTTGTGGCCGATC 93
                          ** *      *      *  *** *   * * *   ****** * **  *      

consensus_8850#1      -TGAGTATTACGAAACGTCCAACTTAGAAGCGCAACAGCAAGTGA-CTGCCAATTTAGCG 231
consensus_8850#3      -TGAGTATTACGAAACGTCCAACTTAGAAGCGCAACAGCAAGTGA-CTGCCAATTTAGCA 144
consensus_8850#0      -TGAGTATTACGAAACGTCCAACTTAGAAGCGCAACAGCAAGTGA-CTGCCAATTTAGCA 153
consensus_8850#2      TTCAGTAGCACTATGCA-CTGGGCCAAAGCTAGTGCGATGGATGAGCTGCCA--CAAGCG 150
                       * ****  ** *  *  *      * *       *      *** ******    *** 

consensus_8850#1      AACTTTGCGTACGATCCGATTAATTGGACATTTCTGCGC---GAACAAAAGCACACGAAC 288
consensus_8850#3      AACTTTGCGTACGATCCGATCAATTGGACGTTTCTGCGCC--AAGCAAAAGCACACGAGC 202
consensus_8850#0      AACTTTGCGTACGATCCGATCAATTGGACGTTTCTGCGC---GAAGAAAAGCACACGAGC 210
consensus_8850#2      ---CCCGAGTGCAATCCTACGGTAGGGACGGTGTTCCNGTTTGACTGAGAACATTCCTGC 207
                            * ** * **** *      ****  *  * *      *   * * **  *   *

consensus_8850#1      TGTTTTACGATATCGTTCAGCAGTCCACGGGAAGCGTAGTGGACCGGCTGCTTCTTTTGC 348
consensus_8850#3      TGTTTTACGATATCGTTCAGCAGTCCACGGGAAGCGTAGTGGACCGGCTGCTTCTTTTGC 262
consensus_8850#0      TGTTTTACGATATCGTTCAGCAGTCGACGGGAAGCGTAGTGGACCGGCTGCTTCTTTTGC 270
consensus_8850#2      GATGACCTGATGTTAAACAATTTTGTCGCTCTAACCTGGTGA--CAGCAATCCAATCCAC 265
                        *     *** *    **    *        * * * ***   * **       *   *

consensus_8850#1      A-TGCAATCGTTGGACTG--GCAAACATTTCCCTTTTTTCAGCGATTGCAGAATTTATC- 404
consensus_8850#3      A-TGCAATCGTTGGACTG--GCAAACATTTCCCTCGATCCAGCGATTGCAGAATTTATC- 318
consensus_8850#0      A-TGCAATCGTTGGGCTG--GCAAACATTTGCCTCGATCCAGCGATTGCAGAATTTATC- 326
consensus_8850#2      AGTGTCAACGACGAACGACTGTGAGCGCAAAGAGCAGCTGTTCGTGAATGGAGCCTTCCT 325
                      * **  * **  *  *    *  * *                **      **   *  * 

consensus_8850#1      GAGCGAAGAACCGGATACGACCAGCTGAGAGCGCTGCTGGAGAAACTATCAAACCGAC-- 462
consensus_8850#3      GAGCGAAGCAACGGATACGACCAGCTTAGAGCGCTGCTGGAGAAA-TATCAAACCGAC-- 375
consensus_8850#0      GAGCGAAG-AACGGATACGATCAGCTTAGAGCGCTGCTGGAGAAA-TATCAAACCGAC-- 382
consensus_8850#2      GAACGGCGTCAT---TGCGGGCATCATTGGTTCCAACTTTCCCGGTTATCGTGGTGACGA 382
                      ** **  *       * **  ** *   *    *  **        ****     ***  

consensus_8850#1      TGTGAGATTGTTTGCAACGCGCTGACGTGCT-ATTCTTTCCTGCTAAATG-ACACCAGCA 520
consensus_8850#3      TGTGAGATTGTTTGCAACGCGCTAACGTGTTCATTCTTTCCTGCTGAATG-ACACCAGCA 434
consensus_8850#0      TGTGAGATTGCTTGCAACGCGCTAACGTGCT-ATTCTTTCCTGCTTAATG-ACTCCAGCA 440
consensus_8850#2      NGCAAGAACTTTCGCTTCCCGAACCGGTGCCAGCTAGACANAGGAGTGTGCAGTTCAGCG 442
                       *  ***    * **  * **     ***     *       *     ** *   **** 

consensus_8850#1      CTGACCAGTTGAAGAAGGACAAAGGTTTGGTGCATTTGTTAGAACGTTTTAAGCGGTCAG 580
consensus_8850#3      CTGACCAGTTGAAGAAGGACAAAGGTTTG------------------------------- 463
consensus_8850#0      CTGACCAGTTGAAGAAGGACAAAAGGTTGGTGCGTTTGTTAGAACGTTTTAAGCAGTCAG 500
consensus_8850#2      -TCACGGTNGGAGGNAATGCGGAAAATCGTAACT-------------------------- 475
                       * **     ** * *   *  *   * *                               

consensus_8850#1      GAAATCCACGAATTGCCAATCTTGCTACCGTACTTGTGGCCGATCTTCAGTAGCGCTATG 640
consensus_8850#3      ------------------------------------------------------------
consensus_8850#0      GAAATCCACGAATTGCCAATATTGCTACCGTACTTGTGGCCGATCTTCAGTAGCACTATG 560
consensus_8850#2      ------------------------------------------------------------
                                                                                  

consensus_8850#1      CACGGGCTAAAGCTAGTGCGATGGATGAGCGCCACAAGCGCCCGAGTGCAACCTACGGTA 700
consensus_8850#3      ------------------------------------------------------------
consensus_8850#0      CACGGGCCAAAGCTAGTGCGATGGATGAGCGCCACAAGCGCCCGAGTGCAACCTACGGTA 620
consensus_8850#2      ------------------------------------------------------------
                                                                                  

consensus_8850#1      GGGACGGTGTTCCGTTTGACGAGAACATTCCGCGAGACCGATGTTAAACAGTTTGTCGCT 760
consensus_8850#3      ------------------------------------------------------------
consensus_8850#0      GGGACGGTGTTCCGTTTGACGAGAACATTCCGCGAGACCGATGTTAAACAGTTTGTCGCT 680
consensus_8850#2      ------------------------------------------------------------
                                                                                  

consensus_8850#1      CTAACCGGTGACAGCAATCCAATCCACGTGTCGACGACGAACGACGGTGAGTGCAAAG-- 818
consensus_8850#3      ------------------------------------------------------------
consensus_8850#0      CTAACCGGTGACAGCAATCCAATCCACGTGTCGACGACGAACGACTGTGAGCGCAAAGAG 740
consensus_8850#2      ------------------------------------------------------------
                                                                                  

consensus_8850#1      ------------------------------------------------------------
consensus_8850#3      ------------------------------------------------------------
consensus_8850#0      CAGCTGTTCGTGAATGGAGCCTTCCTGAACGGCGTCATTGCGGGCATCATTGGTTCCAAC 800
consensus_8850#2      ------------------------------------------------------------
                                                                                  

consensus_8850#1      ------------------------------------------------------------
consensus_8850#3      ------------------------------------------------------------
consensus_8850#0      TTTCCCGGTTTTGTGGTGACGACGCAGAACTTTCGCTTCCCAAACCGGTGCCAGCTAGAC 860
consensus_8850#2      ------------------------------------------------------------
                                                                                  

consensus_8850#1      ------------------------------------------------------------
consensus_8850#3      ------------------------------------------------------------
consensus_8850#0      AAGGAGGTGCAGTTCAGTGTCACGGTGGAGGAAATGCGGAAAATCGTAACTGTTTCGTAC 920
consensus_8850#2      ------------------------------------------------------------
                                                                                  

consensus_8850#1      ------------------------------------------------------------
consensus_8850#3      ------------------------------------------------------------
consensus_8850#0      GAAAGCAAACAAAGCGATCGCGTTGTTTTCGAGGGCATTGCGAAACTGTTTGCGGTGCGG 980
consensus_8850#2      ------------------------------------------------------------
                                                                                  

consensus_8850#1      ------------------------------------------------------------
consensus_8850#3      ------------------------------------------------------------
consensus_8850#0      AAATGAAAACACAGTTAGCGTAAAATAACAATGTGAATGCTACTTTTTTGCTGAATGAAG 1040
consensus_8850#2      ------------------------------------------------------------
                                                                                  

consensus_8850#1      ------------------------------------------------------------
consensus_8850#3      ------------------------------------------------------------
consensus_8850#0      CATCTGCGAAGGGAGCATATTGCAGGAATGATGTAACGGCCAGATGTACTGGATACTGGC 1100
consensus_8850#2      ------------------------------------------------------------
                                                                                  

consensus_8850#1      -----------------------------------------------------
consensus_8850#3      -----------------------------------------------------
consensus_8850#0      TTGAAGTGGACTATTTTAGGTAGTTTAATCAAACAAACAACAATAAAGTATGT 1153
consensus_8850#2      -----------------------------------------------------