cluster # 8865

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Anopheles gambiae
cluster # 8865 cluster # 8865 Sequences # 12 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8865#0 length = 1817 sequences # 10

consensus_8865#1 length = 453 sequences # 1
consensus_8865#2 length = 370 sequences # 1

consensusID : consensus_8865#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 1817
fasta sequence

                              [TGCGCGCGTTGCTGCTTCGCGAACTGCACGGGGCACGGTGGAAAATGTGGTAGCAAACCGACAAAAAGTGCTGGAAAAGTGGTGTGAAAAGTAAAAACCAGAAGCGTTGGGATGCTACTGCGGCTGCG-GGTTTTTGTGCGGGAATCGTTAGAAGCTGTCCCAATCGCTCAACCGTTCCGTACCTCGCCAGCCAAAGCGTACCACCTCCATCGCTCGCAGTAAGAAGGAGAGGAAGAAGCAGCAAAGTCGGTTGTGGCGCGTATACAATCCTCCAGTGCCTGCTGCTGTGATTTGCTTCCATTTTTGCACAGTTCACAAAGTTTGCCAAAAAATCACCGAAAACCGTTTCTCGCGGACGTGTCCAGAGCGATCAACGCCAGCCATGGGAGAAATGAACGGCGAGGGGCAAATCGAGGTGCTGGAAAACGACATACGCACGTTGCGAAAGCAGCTGCAGGAGAAGGTTCAGCAGCTGAAGACCTTGAAAAAGCATTTTCAGAAAAATTGCATTACCAAGCTGAACAACGATGAAATTGCACGGTACAGCCGCCAGATTATCCTATCCGAGATCGGGGTCCAGGGGCAGCTGAAGCTGAAGAAAGCCTCCGTGCTGGTGGTGGGTGCCGGCGGGCTCGGCTGCCCTGCCGCCCTCTACTTGGCCGGTGCCGGTATCGGCCGGATCGGCGTGCTGGACTACGACGAGGTGGAGCTGACCAACCTGCACCGCCAGCTGCTACACACGGAGGCGACGGTCGGACTGACCAAGGTCACCTCGGTACAGTCGTACCT-GGAGCAGCTCAACTCGCAGATCGAAATCGAGACGCACCACGCACAGCTCACGAGCGAGAACGCGCTCGCCCTGCTCGAACCGTACGACGTGGTCGTGGACGCGACGGACAACGTGGCCACCCGGTACCTGCTGAACGATGCGTGCGTCCTGCTGCGCAAACCGCTCGTCTCGGGCAGCGCGCTCCAGCTCGAGGGCCAGCTGACCGTGTACAACTACCGCGGTGGGCCCTGTATCGCTGCCTCTTCCCGACCCCGCCACCGCCCGAATCGGTCACCAACTGTGGGGACGGGGGCGTCCTCGGTGCCATCACCGGTGTGATCGGCGCTCTACAGGCGCTGGAAACGATCAAAATCATCCTGTCGAACGAGGGCGTACTGGCCGGGCGGTTGCTGCTGTTCGATGGACAGCAGAGCGGTTCCGCAACCTCAAG-TGCGCCCCAAAAAACCCACCTGTGCCGTCTGCTCCGAGGCGCCCACACTCACCAAGCTGATCGACTACGAGCAGTTCTGCGGGATGCGGGCCACCGACAAGGACGCCGCCCTGACGCTGCTCGAACCGTGCGAGCGAATTTCGGTGCGCGATTATCACGACGGCTGGCTGGCGGCGGGCCGGGACCACCTGCTGGTGGACGTGCGCAACGCCAATCAGTACGAAATGTGTCAGCTGCCGGGCGCACCGGTCAACGTACCGATCGAGGACATTCTTAGCAACCGGCGCACGGAGGAGCTGCTGGCACGAGCGCAACAAGCGCAGCTACCGGTGTACGTCGTGTGTCGCCGTGGCAACGATTCACAGCTGGCGGTGCGGCACCTGGCGCCACTGTTCCGGGAGCGCAATCTGCCCGCGCCACGCGACCTGATCGGCGGGCTGCACGCCTGGACGAAAACGATCGATCCAAACTTTCCCATCTACTGAACGGGACTTCCCGCCTTATCATCATTTGTTTTGTAATATTTGTCTTTTCGAGCACAATAAAATCATAAACCACTGTTGGTTG-GCATAGCGCGACAGTACCCTTTAAAAAAAA]

[+] EMBL CNS09CV8             [TGCGCGCGTTGCTGCTTCGCGAACTGCACGGGGCACGGTGGAAAATGTGGTAGCAAACCGACAAAAAGTGCTGGAAAAGTGGTGTGAAAAGTAAAAACCAGAAGCGTTGGGATGCTACTGCGGCTGCGCGGTTTTTGTGCGGGAATCGTTAGAAGCTGTCCCAATCGCTCAACCGTTCCGTACCTCGCCAGCCAAAGCGTACCACCTCCATCGCTCGCAGTAAGAAGGAGAGGAAGAAGCAGCAAAGTCGGTTGTGGCGCGTATACAATCCTCCAGTGCCTGCTGCTGTGATTTGCTTCCATTTTTGCACAGTTCACAAAGTTTGCCAAAAAATCACCGAAAACCGTTTCTCGCGGACGTGTCCAGAGCGATCAACGCCAGCCATGGGAGAAATGAACGGCGAGGGGCAAATCGAGGTGCTGGAAAACGACATACGCACGTTGCGAAAGCAGCTGCAGGAGAAGGTTCAGCAGCTGAAGACCTTGAAAAAGCATTTTCAGAAAAATTGCATTACCAAGCTGAACAACGATGAAATTGCACGGTACAGCCGCCAGATTATCCTATCCGAGATCGGGGTCCAGGGGCAGCTGAAGCTGAAGAAAGCCTCCGTGCTGGTGGTGGGTGCCGGCGGGCTCGGCTGCCCTGCCGCCCTCTACTTGGCCGGTGCCGGTATCGGCCGGATCGGCGTGCTGGACTACGACGAGGTGGAGCTGACCAACCTGCACCGCCAGCTGCTACACACGGAGGCGACGGTCGGACTGACCAAGGCCACCTCGGTACAGTCGTACCT GGAGCAGCTCAACTCGCAGATCGAAATCGAGACGCACCACGCACAGCTCACGAGCGAGAACGCGCTCGCCCTGCTCGAACCGTACGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CNS09HAA             [                                                          CGACAAAAAGTGCTGGAAAAGTGGTGTGAAAAGTAAAAACCAGAAGCGTTGGGATGCTACTGCGGCTGCG GGTTTTTGTGCGGGAATCGTTAGAAGCTGTCCCAATCGCTCAACCGTTCCGTACCTCGCCAGCCAAAGCGTACCACCTCCATCGCTCGCAGTAAGAAGGAGAGGAAGAAGCAGCAAAGTCGGTTGTGGCGCGTATACAATCCTCCAGTGCCTGCTGCTGTGATTTGCTTCCATTTTTGCACAGTTCACAAAGTTTGCCAAAAAATCACCGAAAACCGTTTCTCGCGGACGTGTCCAGAGCGATCAACGCCAGCCATGGGAGAAATGAACGGCGAGGGGCAAATCGAGGTGCTGGAAAACGACATACGCACGTTGCGAAAGCAGCTGCAGGAGAAGGTTCAGCAGCTGAAGACCTTGAAAAAGCATTTTCAGAAAAATTGCATTACCAAGCTGAACAACGATGAAATTGCACGGTACAGCCGCCAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CNS095KG             [                                                                AAAGTGCTGGAAAAGTGCCCTGAAAAGTAAAAACCAGAAGCGTTGGGATGCTACTGCGGCTGCG GGTTTTTGTGCGGGAATCGTTAGAAGCCGTCCCAATCGCTCAACCGTTCCGTACCTCGCCAGCCAAAGCGTACCACCTCCATCGCTCGCAGTAAGAAGGAGAGGAAGAAGCAGCAAAGTCGGTTGTGGCGCGTATACAATCCTCCAGTGCCTGCTGCTGTGATTTGCTTCCATTTTTGCACAGTTCACAAAGTTTGCCAAAAAATCACCGAAAACCGTTTCTCGCGGACGTGTCCAGAGCGATCAACGCCAGCCATGGGAGAAATGAACGGCGAGGGGCAAATCGAGGTGCTGGAAAACGACATACGCACGTTGCGAAAGCAGCTGCAGGAGAAGGTTCAGCAGCTGAAGACCTTGAAAAAGCATTTTCAGAAAAATTGCATTACCAAGCTGAACAACGATGAAATTGCACGGTACAGCCGCCAGATTATCCTATCCGAGATCGGGGTCCAGGGGCAGCTGAAGCTGAAGAAAGCCTCCGTGCTGGTGGTGGGTGCCGGCGGGCTCGGCTGCCCTGCCGCCCTCTACTTGGCCGGTGCCGGTATCGGCCGGATCGGCGTGCTGGACTACGACGAGGTGGAGCTGACCAACCTGCACCGCCAGCTGCTACACACGGAGGCGACGGTCGGACTGACCAAGGTCACCTCGGTACAGTCGTACCTGGGAGCAGCTCAACTCGCAGATCGAAATCGAGACGCACCACGCACAGCTCACGAGCGAGAACGCGCTCGCCCTGCTCGAACCGTACGACGTGGTCGTGGACGCGACGGACAACGTGGCCACCCGGTACCTGCTGAACGATGCGTGCGTCCTGCTGCGCAAACCGCTCGTCTCGGGCAGCGCGCTCCAGCTCGAGGGCCAGCTGACCGTGTACAACTACCGCGGTGGGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CNS096SJ             [                                                                     GCTGGAAAAGTGGTGTGAAAAGTAAAAA CAGAAGCGTTGGGGTGCTACTGAGGCTGCG GGTTTTTGTGCGGGAATCGTTAGAAGCTGTCCCAATCGCTCAACCGTCCCGTACCTCTCCAGCCAAAGCGTACCACCTCCATCGCTCGCAGTAAGAAGGAGAGGAAGAAGCAGCAAAGTCGGTTGTGGCGCGTATACAATCCTCCAGTGCCTGCTGCTGTGGTTTGCTCCCATTTTTGCACAGTTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL BX626596             [                                                                                                                          GCTGCG GGTTTTTGTGCGGGAATCGTTAGAAGCTGTCCCAATCGCTCAACCGTCCCGTACCTCGCCAGCGAAAGCGTACCACCTCCATCGCTCGCAGTAAGAAGGAGAGGAAGAAGCAGCAAAGTCGGTTGTGGCGCGTATACAATCCTCCAGTGCCTGCTGCTGTGATTTGCTTCCATTTTTGCACAGTTCACAAAGTTTGCCAAAAAATCACCGAAAACCGTTTCTCGCGGACGTGTCCAGAGCGATCAACGCCAGCCATGGGAGAAATGAACGGCGAGGGGCAAATCGAGGTGCTGGAAAACGACATACGCACGTTGCGAAAGCAGCTGCAGGAGAAGGTTCAGCAGCTGAAGACCTTGAAAAAGCATTTTCAGAAAAATTGCATTACCAAGCTGAACAACGATGAAATTGCACGGTACAGCCGCCAGATTATCCTATCCGAGATCGGGGTCCAGGGGCAGCTGAAGCTGAAGAAAGCCTCCGTGCTGGTGGTGGGTGCCGGCGGGCTCGGCTGCCCTGCCGCCCTCTACCTGGCCGGTGCCGGTATCGGCCGGATCGGCGTGCTGGACTACGACGANGTGGAGCTGACCAACCTGCACCGCCAGCTGCTACACACGGANGCGACGGTCGGCCTGACCAAGGTCACCTCNGTACAGTCGTACCT GGAGCAGCTCNACTCGCAGATCGAAATCGAGACGCACCACGCACAGCTCACGAGCGAGAACGCGCTCGCCCTGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CNS09CV9             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       CCGCTCGTCTCGGGCAGCGCGCTCCAGCTCGAGGGCCAGCTGACCGTGTACAACTACCGCGGTGGGCCCTGTATCGCTGCCTCTTCCCGACCCCGCCACCGCCCGAATCGGTCACCAACTGTGGGGACGGGGGCGTCCTCGGTGCCATCACCGGTGTGATCGGCGCTCTACAGGCGCTGGAAACGATCAAAATCATCCTGTCGAACGAGGGCGTACTGGCCGGGCGGTTGCTGCTGTTCGATGGACAGCAGAGCGGTTCCGCAACCTCAAG TGCGCCCCAAAAAACCCACCTGTGCCGTCTGCTCCGAGGCGCCCACACTCACCAAGCTGATCGACTACGAGCAGTTCTGCGGGATGCGGGCCACCGACAAGGACGCCGCCCTGACGCTGCTCGAACCGTGCGAGCGAATTTCGGTGCGCGATTATCACGACGGCTGGCTGGCGGCGGGCCGGGACCACCTGCTGGTGGACGTGCGCAACGCCAATCAGTACGAAATGTGTCAGCTGCCGGGCGCACCGGTCAACGTACCGATCGAGGACATTCTCAGCAACCGGCGCACGGAGGAGCTGCTGGCACGAGCGCAACAAGCGCAGCTACCGGTGTACGTCGTGTGTCGCCGTGGCAACGATTCACAGCTGGCGGTGCGGCACCTGGCGCCACTGTTCCGGGAGCGCAATCTGCCCGCGCCACGCGACCTGATCGGCGGGCTGCACGCCTGGACGAAAACGATCGATCCAAACTTTCCCATCTACTGAACGGGACTTCCCGCCTTATCATCATTTGTTTTGTAATATTTGTCTTTTCGAGCACAATAAAATCATAAACCACTGTTGGTTG GCATAGC                       ]
[+] EMBL AGA284889            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             AACCTCAAGCTGCGCCCCAAAAAACCCACCTGTGCCGTCTGCTCCGAGGCGCCCACACTCACCAAGCTGATCGACTACGAGCAGTTCTGCGGGATGCGGGCCACCGACAAGGACGCCGCCCTGACGCTGCTCGAACCGTGCGAGCGAATTTCGGTGCGCGACTATCACGACGGCTGGCTAGCGGCCGGTCGGGACCATCTGCTAGTGGACGTGCGCAACGCCAATCAGTACGAAATGTGTCAGCTGCCGGGCGCACCGGTCAACGTACCGATCGAGGACATTCTTAGCAACCGGCGCACGGAGGAGCTGCTAGCACGGGCGCAACAAGCGCAGCTACC                                                                                                                                                                                                                                                                              ]
[-] EMBL CNS09HAB             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  TCTGCTCCGAGGCGCCCACACTCACCAAGCTGATCGACTACGAGCAGTTCTGCGGGATGCGGGCCACCGACAAGGACGCCGCCCTGACGCTGCTCGAACCGTGCGAGCGAATTTCGGTGCGCGATTATCACGACGGCTGGCTGGCGGCGGGCCGGGACCACCTGCTGGTGGACGTGCGCAACGCCAATCAGTACGAAATGTGTCAGCTGCCGGGCGCACCGGTCAACGTACCGATCGAGGACATTCTTAGCAACCGGCGCACGGAGGAGCTGCTGGCACGAGCGCAACAAGCGCAGCTACCG                                                                                                                                                                                                                                                                             ]
[-] EMBL CNS096SK             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GGTCGGGACCATCTGCTAGTGGACGTGCGCAACGCCAATCAGTACGAAATGTGTCAGCTGCCGGGCGCACCGGTCAACGTACCGATCGA                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL AGA283600            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ACGCCAATCAGTACGAAATGTGTCAGCTGCCGGGCGCACCGGTCAACGTACCGATCGAGGACATTCTTAGCAACCGGCGCACGGAGGAGCTGCTAGCACGGGCGCAACAAGCGCAGCTACCGGTGTACGTCGTGTGTCGCCGTGGCAACGATTCACAGCTGGCGGTGCGGCACCTGGCGCCACTGTTCCGGGAGCGCAATCTGCCCGCGCCACGCGACCTGATCGGCGGGCTGCACGCCTGGACGAAAACGATCGATCCAAACTTTCCCATCTACTGAACGGGACTTCCCGCCTTATCATCATTTGTTTTGTAATATTTGTCTTTTCGAGCACAATAAAATCATAAACCACTGTTGGTGGCGCATAGCGCGACAGTACCCTTTAAAAAAAA]




>consensus_8865#0
TGCGCGCGTTGCTGCTTCGCGAACTGCACGGGGCACGGTGGAAAATGTGGTAGCAAACCG
ACAAAAAGTGCTGGAAAAGTGGTGTGAAAAGTAAAAACCAGAAGCGTTGGGATGCTACTG
CGGCTGCGGGTTTTTGTGCGGGAATCGTTAGAAGCTGTCCCAATCGCTCAACCGTTCCGT
ACCTCGCCAGCCAAAGCGTACCACCTCCATCGCTCGCAGTAAGAAGGAGAGGAAGAAGCA
GCAAAGTCGGTTGTGGCGCGTATACAATCCTCCAGTGCCTGCTGCTGTGATTTGCTTCCA
TTTTTGCACAGTTCACAAAGTTTGCCAAAAAATCACCGAAAACCGTTTCTCGCGGACGTG
TCCAGAGCGATCAACGCCAGCCATGGGAGAAATGAACGGCGAGGGGCAAATCGAGGTGCT
GGAAAACGACATACGCACGTTGCGAAAGCAGCTGCAGGAGAAGGTTCAGCAGCTGAAGAC
CTTGAAAAAGCATTTTCAGAAAAATTGCATTACCAAGCTGAACAACGATGAAATTGCACG
GTACAGCCGCCAGATTATCCTATCCGAGATCGGGGTCCAGGGGCAGCTGAAGCTGAAGAA
AGCCTCCGTGCTGGTGGTGGGTGCCGGCGGGCTCGGCTGCCCTGCCGCCCTCTACTTGGC
CGGTGCCGGTATCGGCCGGATCGGCGTGCTGGACTACGACGAGGTGGAGCTGACCAACCT
GCACCGCCAGCTGCTACACACGGAGGCGACGGTCGGACTGACCAAGGTCACCTCGGTACA
GTCGTACCTGGAGCAGCTCAACTCGCAGATCGAAATCGAGACGCACCACGCACAGCTCAC
GAGCGAGAACGCGCTCGCCCTGCTCGAACCGTACGACGTGGTCGTGGACGCGACGGACAA
CGTGGCCACCCGGTACCTGCTGAACGATGCGTGCGTCCTGCTGCGCAAACCGCTCGTCTC
GGGCAGCGCGCTCCAGCTCGAGGGCCAGCTGACCGTGTACAACTACCGCGGTGGGCCCTG
TATCGCTGCCTCTTCCCGACCCCGCCACCGCCCGAATCGGTCACCAACTGTGGGGACGGG
GGCGTCCTCGGTGCCATCACCGGTGTGATCGGCGCTCTACAGGCGCTGGAAACGATCAAA
ATCATCCTGTCGAACGAGGGCGTACTGGCCGGGCGGTTGCTGCTGTTCGATGGACAGCAG
AGCGGTTCCGCAACCTCAAGTGCGCCCCAAAAAACCCACCTGTGCCGTCTGCTCCGAGGC
GCCCACACTCACCAAGCTGATCGACTACGAGCAGTTCTGCGGGATGCGGGCCACCGACAA
GGACGCCGCCCTGACGCTGCTCGAACCGTGCGAGCGAATTTCGGTGCGCGATTATCACGA
CGGCTGGCTGGCGGCGGGCCGGGACCACCTGCTGGTGGACGTGCGCAACGCCAATCAGTA
CGAAATGTGTCAGCTGCCGGGCGCACCGGTCAACGTACCGATCGAGGACATTCTTAGCAA
CCGGCGCACGGAGGAGCTGCTGGCACGAGCGCAACAAGCGCAGCTACCGGTGTACGTCGT
GTGTCGCCGTGGCAACGATTCACAGCTGGCGGTGCGGCACCTGGCGCCACTGTTCCGGGA
GCGCAATCTGCCCGCGCCACGCGACCTGATCGGCGGGCTGCACGCCTGGACGAAAACGAT
CGATCCAAACTTTCCCATCTACTGAACGGGACTTCCCGCCTTATCATCATTTGTTTTGTA
ATATTTGTCTTTTCGAGCACAATAAAATCATAAACCACTGTTGGTTGGCATAGCGCGACA
GTACCCTTTAAAAAAAA

consensusID : consensus_8865#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 453
fasta sequence

                              [CAACCTTTTGCTTCTCTCTCTTCGTGCTGTGGGAACGTTTGTGTGTTTGCGTGTGAATTGTGCTAATTTATTTCGGTTCTCTTCTACTTACAGAATTGCATTACCAAGCTGAACAACGATGAAATTGCACGGTACAGCCGCCAGATTATCCTATCCGAGATCGGGGTCCAGGGGCAGCTGAAGCTGAAGAAAGCCTCCGTGCTGGTGGTGGGTGCCGGCGGGCTCGGCTGCCCTGCCGCCCTCTACCTGGCCGGTGCCGGTATCGGCCGGATCGGCGTGCTGGACTACGACGAGGTGGAGCTGACCAACCTGCACCGCCAGCTGCTACACACGGAGGCGACGGTCGGGCTGACCAAGGTCACCTCGGTACAGTCGTACCTGGAGCAGCTCAACTCGCAGATCGAAATCGAGACGCACCACGCGCAGCTCACGAGCGAGAACGCGCTCGCCCTG]

[+] EMBL BX605833             [CAACCTTTTGCTTCTCTCTCTTCGTGCTGTGGGAACGTTTGTGTGTTTGCGTGTGAATTGTGCTAATTTATTTCGGTTCTCTTCTACTTACAGAATTGCATTACCAAGCTGAACAACGATGAAATTGCACGGTACAGCCGCCAGATTATCCTATCCGAGATCGGGGTCCAGGGGCAGCTGAAGCTGAAGAAAGCCTCCGTGCTGGTGGTGGGTGCCGGCGGGCTCGGCTGCCCTGCCGCCCTCTACCTGGCCGGTGCCGGTATCGGCCGGATCGGCGTGCTGGACTACGACGAGGTGGAGCTGACCAACCTGCACCGCCAGCTGCTACACACGGAGGCGACGGTCGGGCTGACCAAGGTCACCTCGGTACAGTCGTACCTGGAGCAGCTCAACTCGCAGATCGAAATCGAGACGCACCACGCGCAGCTCACGAGCGAGAACGCGCTCGCCCTG]




>consensus_8865#1
CAACCTTTTGCTTCTCTCTCTTCGTGCTGTGGGAACGTTTGTGTGTTTGCGTGTGAATTG
TGCTAATTTATTTCGGTTCTCTTCTACTTACAGAATTGCATTACCAAGCTGAACAACGAT
GAAATTGCACGGTACAGCCGCCAGATTATCCTATCCGAGATCGGGGTCCAGGGGCAGCTG
AAGCTGAAGAAAGCCTCCGTGCTGGTGGTGGGTGCCGGCGGGCTCGGCTGCCCTGCCGCC
CTCTACCTGGCCGGTGCCGGTATCGGCCGGATCGGCGTGCTGGACTACGACGAGGTGGAG
CTGACCAACCTGCACCGCCAGCTGCTACACACGGAGGCGACGGTCGGGCTGACCAAGGTC
ACCTCGGTACAGTCGTACCTGGAGCAGCTCAACTCGCAGATCGAAATCGAGACGCACCAC
GCGCAGCTCACGAGCGAGAACGCGCTCGCCCTG

consensusID : consensus_8865#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 370
fasta sequence

                              [GCAAGAATCGGCACNATGGTTGAGACGCACCACGCACAGTCTCACGAGCGAGAACGCGCTCGCCCTGCTCGAACCGTACGACGTGGTCGTGGACGCGACGGACAACGTGGCCACCCGGTACCTGCTGAACGATGCGTGCGTCCTGCTGCGCAAACCGCTCGTCTCGGGCAGCGCGCTCCAGCTCGAGGGCCAGCTGACCGTGTACAACTACCGCGGTGGGCCCTGCTATCGCTGCCTCTTCCCGACCCCGCCCCCGCCCGAATCGGTCACCAACTGTGGGGACGGGGGCGTCCTCGGGGCCATCACCGGTGTGATCGGCGCCCTGCAGGCGCTGGAAACGATCAAAATCATCCTGTCGAACGAGGGCGTA]

[+] EMBL BX468549             [GCAAGAATCGGCACNATGGTTGAGACGCACCACGCACAGTCTCACGAGCGAGAACGCGCTCGCCCTGCTCGAACCGTACGACGTGGTCGTGGACGCGACGGACAACGTGGCCACCCGGTACCTGCTGAACGATGCGTGCGTCCTGCTGCGCAAACCGCTCGTCTCGGGCAGCGCGCTCCAGCTCGAGGGCCAGCTGACCGTGTACAACTACCGCGGTGGGCCCTGCTATCGCTGCCTCTTCCCGACCCCGCCCCCGCCCGAATCGGTCACCAACTGTGGGGACGGGGGCGTCCTCGGGGCCATCACCGGTGTGATCGGCGCCCTGCAGGCGCTGGAAACGATCAAAATCATCCTGTCGAACGAGGGCGTA]




>consensus_8865#2
GCAAGAATCGGCACNATGGTTGAGACGCACCACGCACAGTCTCACGAGCGAGAACGCGCT
CGCCCTGCTCGAACCGTACGACGTGGTCGTGGACGCGACGGACAACGTGGCCACCCGGTA
CCTGCTGAACGATGCGTGCGTCCTGCTGCGCAAACCGCTCGTCTCGGGCAGCGCGCTCCA
GCTCGAGGGCCAGCTGACCGTGTACAACTACCGCGGTGGGCCCTGCTATCGCTGCCTCTT
CCCGACCCCGCCCCCGCCCGAATCGGTCACCAACTGTGGGGACGGGGGCGTCCTCGGGGC
CATCACCGGTGTGATCGGCGCCCTGCAGGCGCTGGAAACGATCAAAATCATCCTGTCGAA
CGAGGGCGTA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8865#0      TGCGCGCGTTGCTGCTTCGCGAACTGCACGGGGCACGGTGGAAAATGTGGTAGCAAACCG 60
consensus_8865#2      ------------------------------------------------------------
consensus_8865#1      ------------------------------------------------------------
                                                                                  

consensus_8865#0      ACAAAAAGTGCTGGAAAAGTGGTGTGAAAAGTAAAAACCAGAAGCGTTGGGATGCTACTG 120
consensus_8865#2      ------------------------------------------------------------
consensus_8865#1      ------------------------------------------------------------
                                                                                  

consensus_8865#0      CGGCTGCGGGTTTTTGTGCGGGAATCGTTAGAAGCTGTCCCAATCGCTCAACCGTTCCGT 180
consensus_8865#2      ------------------------------------------------------------
consensus_8865#1      ------------------------------------------------------------
                                                                                  

consensus_8865#0      ACCTCGCCAGCCAAAGCGTACCACCTCCATCGCTCGCAGTAAGAAGGAGAGGAAGAAGCA 240
consensus_8865#2      ------------------------------------------------------------
consensus_8865#1      ------------------------------------------------------------
                                                                                  

consensus_8865#0      GCAAAGTCGGTTGTGGCGCGTATACAATCCTCCAGTGCCTGCTGCTGTGATTTGCTTCCA 300
consensus_8865#2      ------------------------------------------------------------
consensus_8865#1      ------------------------------------------------------------
                                                                                  

consensus_8865#0      TTTTTGCACAGTTCACAAAGTTTGCCAAAAAATCACCGAAAACCGTTTCTCGCGGACGTG 360
consensus_8865#2      ------------------------------------------------------------
consensus_8865#1      ------------------------------------------------------------
                                                                                  

consensus_8865#0      TCCAGAGCGATCAACGCCAGCCATGGGAGAAATGAACGGCGAGGGGCAAATCGAGGTGCT 420
consensus_8865#2      ------------------------------------------------------------
consensus_8865#1      ------------------------------------------------------------
                                                                                  

consensus_8865#0      GGAAAACGACATACGCACGTTGCGAAAGCAGCTGCAGGAGAAGGTTCAGCAGCTGAAGAC 480
consensus_8865#2      ------------------------------------------------------------
consensus_8865#1      ------------------------------------------------------------
                                                                                  

consensus_8865#0      CTTGAAAAAGCATTTTCAGAAAAATTGCATTACCAAGCTGAACAACGATGAAATTGCACG 540
consensus_8865#2      ------------------------------------------------------------
consensus_8865#1      ------------------------------------------------------------
                                                                                  

consensus_8865#0      GTACAGCCGCCAGATTATCCTATCCGAGATCGGGGTCCAGGGGCAGCTGAAGCTGAAGAA 600
consensus_8865#2      ------------------------------------------------------------
consensus_8865#1      ------------------------------------------------------------
                                                                                  

consensus_8865#0      AGCCTCCGTGCTGGTGGTGGGTGCCGGCGGGCTCGGCTGCCCTGCCGCCCTCTACTTGGC 660
consensus_8865#2      ------------------------------------------------------------
consensus_8865#1      ------------------------------------------------------------
                                                                                  

consensus_8865#0      CGGTGCCGGTATCGGCCGGATCGGCGTGCTGGACTACGACGAGGTGGAGCTGACCAACCT 720
consensus_8865#2      ------------------------------------------------------------
consensus_8865#1      ------------------------------------------------------------
                                                                                  

consensus_8865#0      GCACCGCCAGCTGCTACACACGGAGGCGACGGTCGGACTGACCAAGGTCACCTCGGTACA 780
consensus_8865#2      ------------------------------------------------------------
consensus_8865#1      -------------------------CAACCTTTTGCTTCTCTCTCTTCGTGCTGTGGGAA 35
                                                                                  

consensus_8865#0      GTCGTACCTGGAGCAGCTCAACTCGCAGATCGAAATCGAGACGCACCACGCACAG-CTCA 839
consensus_8865#2      ---------------GCAAGAATCG-GCACNATGGTTGAGACGCACCACGCACAGTCTCA 44
consensus_8865#1      CGTTTGTGTGTTTGCGTGTGAATTGTGCTAATTTATTTCGGTTCTCTTC-TACTTACAGA 94
                                     *    * * *          *   *   * *  *  **   *  *

consensus_8865#0      CGAGCGAGAACGCGCTCGCCC-TGCTCGAACCGTACGACGTGGTCGTGGA-----CGCGA 893
consensus_8865#2      CGAGCGAGAACGCGCTCGCCC-TGCTCGAACCGTACGACGTGGTCGTGGA-----CGCGA 98
consensus_8865#1      ATTGCATTACCAAGCTGAACAACGATGAAATTGCACGGTACAGCCGCCAGATTATCCTAT 154
                         **   * *  ***   *   * *  **  * ***     * **         *    

consensus_8865#0      CGGACAACGTGGCCACCCGGTACCTG---CTGAACGATGCGTGCGTCCTGCTG-CGCAAA 949
consensus_8865#2      CGGACAACGTGGCCACCCGGTACCTG---CTGAACGATGCGTGCGTCCTGCTG-CGCAAA 154
consensus_8865#1      CCGAGATCGGGGTCCAGGGGCAGCTGAAGCTGAAGAAAGCCTCCGTGCTGGTGGTGGGTG 214
                      * ** * ** ** *    ** * ***   *****  * ** * *** *** **  *    

consensus_8865#0      CCGCTCGTCTCGGGCAGC-----GCGCTCCAGCTCG--AGGGCCAGC--TGACCGTGTAC 1000
consensus_8865#2      CCGCTCGTCTCGGGCAGC-----GCGCTCCAGCTCG--AGGGCCAGC--TGACCGTGTAC 205
consensus_8865#1      CCGGCGGGCTCGGCTGCCCTGCCGCCCTCTACCTGGCCGGTGCCGGTATCGGCCGGATCG 274
                      ***   * *****    *     ** *** * ** *   * *** *    * ***  *  

consensus_8865#0      AACTACCGCGGTGGGCCCTG-TATCGCTGCCTCTTCCCGACC-CCGCCACCGCCCGAATC 1058
consensus_8865#2      AACTACCGCGGTGGGCCCTGCTATCGCTGCCTCTTCCCGACC-CCGCCCCCGCCCGAATC 264
consensus_8865#1      GCGTGCTGGACTACGACGAGGTGGAGCTGACCAACCTGCACCGCCAGCTGCTACACACGG 334
                         * * *   *  * *  * *   **** *    *   *** **  *  *  *  *   

consensus_8865#0      GGTCACCAACTGTGGGGACGGGGGCGTCCTCGGTGCCATCA---CCGGTGTGA-TCGGCG 1114
consensus_8865#2      GGTCACCAACTGTGGGGACGGGGGCGTCCTCGGGGCCATCA---CCGGTGTGA-TCGGCG 320
consensus_8865#1      AGGCGACGGTCGGGCTGACCAAGGTCACCTCGGTACAGTCGTACCTGGAGCAGCTCAACT 394
                       * *  *    * *  ***   **   ******  *  **    * ** *    **  * 

consensus_8865#0      CTCTACAGGCGCTGGAAACGATCAAAATCATCCTGTCGAACGAGGGCGTACTGGCCGGGC 1174
consensus_8865#2      CCCTGCAGGCGCTGGAAACGATCAAAATCATCCTGTCGAACGAGGGCGTA---------- 370
consensus_8865#1      CGCAGATCGAAATCGAGACGCACCACGCGCAGCTCACGAGCGAGAACGCGCTCGCCCTG- 453
                      * *     *   * ** ***  * *       **  *** ****  **            

consensus_8865#0      GGTTGCTGCTGTTCGATGGACAGCAGAGCGGTTCCGCAACCTCAAGTGCGCCCCAAAAAA 1234
consensus_8865#2      ------------------------------------------------------------
consensus_8865#1      ------------------------------------------------------------
                                                                                  

consensus_8865#0      CCCACCTGTGCCGTCTGCTCCGAGGCGCCCACACTCACCAAGCTGATCGACTACGAGCAG 1294
consensus_8865#2      ------------------------------------------------------------
consensus_8865#1      ------------------------------------------------------------
                                                                                  

consensus_8865#0      TTCTGCGGGATGCGGGCCACCGACAAGGACGCCGCCCTGACGCTGCTCGAACCGTGCGAG 1354
consensus_8865#2      ------------------------------------------------------------
consensus_8865#1      ------------------------------------------------------------
                                                                                  

consensus_8865#0      CGAATTTCGGTGCGCGATTATCACGACGGCTGGCTGGCGGCGGGCCGGGACCACCTGCTG 1414
consensus_8865#2      ------------------------------------------------------------
consensus_8865#1      ------------------------------------------------------------
                                                                                  

consensus_8865#0      GTGGACGTGCGCAACGCCAATCAGTACGAAATGTGTCAGCTGCCGGGCGCACCGGTCAAC 1474
consensus_8865#2      ------------------------------------------------------------
consensus_8865#1      ------------------------------------------------------------
                                                                                  

consensus_8865#0      GTACCGATCGAGGACATTCTTAGCAACCGGCGCACGGAGGAGCTGCTGGCACGAGCGCAA 1534
consensus_8865#2      ------------------------------------------------------------
consensus_8865#1      ------------------------------------------------------------
                                                                                  

consensus_8865#0      CAAGCGCAGCTACCGGTGTACGTCGTGTGTCGCCGTGGCAACGATTCACAGCTGGCGGTG 1594
consensus_8865#2      ------------------------------------------------------------
consensus_8865#1      ------------------------------------------------------------
                                                                                  

consensus_8865#0      CGGCACCTGGCGCCACTGTTCCGGGAGCGCAATCTGCCCGCGCCACGCGACCTGATCGGC 1654
consensus_8865#2      ------------------------------------------------------------
consensus_8865#1      ------------------------------------------------------------
                                                                                  

consensus_8865#0      GGGCTGCACGCCTGGACGAAAACGATCGATCCAAACTTTCCCATCTACTGAACGGGACTT 1714
consensus_8865#2      ------------------------------------------------------------
consensus_8865#1      ------------------------------------------------------------
                                                                                  

consensus_8865#0      CCCGCCTTATCATCATTTGTTTTGTAATATTTGTCTTTTCGAGCACAATAAAATCATAAA 1774
consensus_8865#2      ------------------------------------------------------------
consensus_8865#1      ------------------------------------------------------------
                                                                                  

consensus_8865#0      CCACTGTTGGTTGGCATAGCGCGACAGTACCCTTTAAAAAAAA 1817
consensus_8865#2      -------------------------------------------
consensus_8865#1      -------------------------------------------