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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8875#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1438 fasta sequence
[TTGGCAATAGCGGCATCTTTATGCAAAAAGCGCTCAAAACCTCCTCCAAAAATCTTTAGTCGTTTAGCAACTAGTGCTAATTACTGTACGAAAAAAAGGCTGTTCACCGTTTTGTTTCATTCTTCGTAAGGTTAACCAGTTTGTGGGTGGAAGATGGCCTGCATATAAGCGCCAGCATTATTAATTTGTAAGCGCATGAATGAATACGTAGACGATTAAATATAATAATTCTTCTACAGTTGGGGTGGAAGGAGTATATTGCAGGACATTGATATCTGTTAACTACTTTCTCTACTCTATGTAATCTGTTTTGTTTGTAGCAAATTAGTTTGTTTAAGAGAGTAACACGCGAAGGAATATCCCAGTTTCGGGACAATGAACGAATTTAGCAACGAAAACACATGGGGAATGGAACATTAGTTTATACTCGTTTACAATTCTACTCGTTCTCTTCCAATTAGGTAATTTTCAATTAACGCTAGACAATAATGAGCGATCTTGAAGCTGTATGTTGTT-AAATTTCACTCCTATATATGTAAAGTTTA-TTTTGTTTCTTGTTTTATTTGCACTTTCCCCTTACCCACTCCCCTTCATAAGCATTAGCAGCCAGATCGGTATAAGTAGCCGAACTTAAAGTAAACGTCTTATCCACAATGCTTAGTATCATATTATTCCAATTGCCCTTAGCTACAACACGTGTAGGAGGACACATTTAAAGTACGTTGCGCAAGCGCATGCGCAATACAGGGTTTTCCAGGGATTCTCATAGTTGTGGGACACTTCCTTGACTCTTTCTTATGCGAAGTGAACTTCATATGTTGGAAATTGGACTCTATGGCGCCCTTTTTGGACAGGTGCCTTGGAAATTCCAATTGGATGTGTCCAACAAGGGTGCTATAGAGTCCAATTCCCATTACATTAAGTTCATTTCATGTAGGAAAGAGTCTATATAGTGTCCCACAGCTACGAGAACTCCTGGAAAACCCTGTATCATCAATATCAGCGTTTCACTGTTTCGTTCCTTTCGTTCGACGACTGGCAACAAGTGGGCAATGTAACGTAATGGAACACTATAAATAAACCGAATGTGCGAATGTTTGCCATTATGTAGGTGATGATGGAATGATAAAGTAAAGCTCCTCCCGGTTTCCCTCCGCATACGGTCAGTCCGTTGAGGCTACCAGCTCACCAGCACACATCCTTATCCGATATCAACGTGTTCAGTGTTTTTTGTGTTACTATCCTATTTAACCAAAGGAAGAGAAGAAAGGCAAAGGAAAGGATTAGGAGATGAGCAGAGAGGGGGGAAAAACCATGCGTAGGGGATCTAGCAAGTGTCTACATTAGGCTACAGGCGTGTACGTGTTGCGTATCCGTTTCTATTATTCCAGGACAGCAGAGGAAAGACACACATACACTAAATAGACCATTTGGATTT]
[-] EMBL BM634151 [TTGGCAATAGCGGCATCTTTATGCAAAAAGCGCTCAAAACCTCCTCCAAAAATCTTTAGTCGTTTAGCAACTAGTGCTAATTACTGTACGAAAAAAAGGCTGTTCACCGTTTTGTTTCATTCTTCGTAAGGTTAACCAGTTTGTGGGTGGAAGATGGCCTGCATATAAGCGCCAGCATTATTAATTTGTAAGCGCATGAATGAATACGTAGACGATTAAATATAATAATTCTTCTACAGTTGGGGTGGAAGGAGTATATTGCAGGACATTGATATCTGTTAACTACTTTCTCTACTCTATGTAATCTGTTTTGTTTGTAGCAAATTAGTTTGTTTAAGAGAGTAACACGCGAAGGAATATCCCAGTTTCGGGACAATGAACGAATTTAGCAACGAAAACACATGGGGAATGGAACATTAGTTTATACTCGTTTACAATTCTACTCGTTCTCTTCCAATTAGGTAATTTTCAATTAACGCTAGACAATAATGAGCGATCTTGAAGCTGTATGTTGTT AAATTTCACTCCTATATATGTAAAGTTTATTTTTGTTTCTTGTTTTATTTGCACTTTCCCCTTACCCACTCCCCTTCATAAGCATTAGCAGCCAGATCGATATAAGTAGCCGAACTTAAAGTAAACGTCTTATCCACAATGCTTAGTATGATATTATTCCAATTGCCCTTAGCTACAACACGTGTAGGAGGACgg ]
[+] EMBL BX621412 [ AAAATCTTTAGTCGTTTAGCAACTAGTGCTAATTACTGTACGAAAAAAAGGCTGTTCACCGTTTTGTTTCATTCTTCGTAAGGTTAACCAGTTTGTGGGTGGAAGATGGCCTGCATATAAGCGCCAGCATTATTAATTTGTAAGCGCATGAATGAATACGTAGACGATTAAATATAATAATTCTTCTACAGTTGGGGTGGAAGGAGTATATTGCAGGACATTGATATCTGTTAACTACTTTCTCTACTCTATGTAAACTGTTTTGTTTGTAGAAAATTAGTTTGTTTGAGAGAGTAACACGCGAAGGAATATCCCAGTTTCGGGACCATGAACGAATTTAGCAACGAAAACACATGGGGAATGGAACATTGGTTTATACTCGTTTACAATTCTACTCGTTCTCTTCCAATTAGGTAATTTTCAACTAACGCTAGACAATAATGAGCGATCTTGAAGCTGTATGTTGTTAAAATTTCACTCCTATATATGTAAAGTTTA TTTTGTTTCTTGTTTTATTTGCACTTTCCCCTTACCCACTCCCCTTCATAAGCATTAGCAGCCAGATCGGTATAAGTAGCCGAACTTAAAGTAAACGTCTTATCCACAATGCTTAGTATCATATTATTCCAATTGCCCTTAGCTACAACACGTGTAGGAGGATACATTTAAAGTACGTTG ]
[+] EMBL BX613335 [ TTTGCACTTTCCCCTTACCCACTCCCCTTCATAAGCATTAGCAGCCAGATCGGTATAAGTAGCCGAACTTAAAGTAAACGTCTTATCCACAATGCTTAGTATCATATTATTCCAATTGCCCTTAGCTACAACACGTGTAGGAGGACACATTTAAAGTACGTTGCGCAAGCGCATGCGCAATACAGGGTTTTCCAGGGATTCTCATAGTTGTGGGACACTTCCTTGACTCTTTCTTATGCGAAGTGAACTTCATATGTTGGAAATTGGACTCTATGGCGCCCTTTTTGGACAGGTGCCTTGGAAATTCCAATTGGATGTGTCCAACAAGGGTGCTATAGAGTCCAATTCCCATTACATTAAGTTCATTTCATGTAGGAAAGAGTCTATATAGTGTCCCACAGCTACGAGAACTCCTGGAAAACCCTGTATCATCAATATCAGCGTTTCACTGTTTCGTTCCTTTCGTTCGACGACTGGCAACAAGTGGGCAATGTAACGTAATGGAACACTATAAATAAACCGAATGTGCGAATGTTTGCCATTATGTAGGTGATGATGGAATGATAAAGTAAAGCTCCTCCCGGTTTCCCTCCGCATACGGTCAGTCCGTTGAGGCTACCAGCTCACCAGCACACATCCTTATCCGATATCAACGTGTTCAGTGTTTTTTGTGTTACTATCCTATTTAACCAAAGGAAGAGAAGAAAGGCAAAGGAAAGGATTAGGAGATGAGCAGAGAGGGGGGAAAAACCATGCGTAGGGGATCTAGCAAGTGTCTACATTAGGCTACAGGCGTGTACGTGTTGCGTATCCGTTTCTATTATTCCAGGACAGCAGAGGAAAGACACACATACACTAAATAGACCATTTGGATTT]
consensusID : consensus_8875#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1204 fasta sequence
[CCGCCCACGCGTCCGCGCTAGCCTACGAACATGCAGAGTCCGATATCATGAAACGACCACCCCGTGATCCCTTCAACGATAAACTTGTCAATGAGAGACTTATCTCGATGGCTTACGGTCAGATCGGTATGATTCAGGCTGCGGCCGGTTTCTTCGTGTACTTCGTCATCATGGCTGAGAACGGATTCCTGCCGCTGAAGCTGTTCGGTCTCCGCAAGAGCTGGGACTCGAAAGCCATCAACGATCTCACCGACTCGTACGGTCAGGAATGGACCTACCGCGATCGCAAGACCCTCGAGTTCACCTGCCACACCGCGTTCTTCGTGTCGATCGTCGTCGTACAGTGGGCCGATTTGATCATCTGTAAGACTCGCCGTAACTCGATTTTCCACCAGGGCATGAGAAACTGGGCCCTCAACTTCGGTCTCGTGTTCGAAACGGTACTGGCTGCCATCCTGTCCTACACGCCGGGCATGGACAAGGGTCTGCGCATGTACCCACTGAAATTCGTTTGGTGGCTACCAGCTTTACCGTTCAGCTTGTCCATCTTCGTGTATGACGAAATTCGTCGCTTCTACTTGAGACGCAATCCAGGCGGCTGGCTAGAGCAAGAAACGTACTATTAGGTCAACAAATTTATATTTAAAAAGATTAATTAAAACAAAACCAACAAAAACCAACTCCCCCGCCCCCTGCACACACACACACACAAACAAACACACAGACACGTGCGGCCATCAATGGGCAGCGCGGCTTCCAGGACACGATCACGTACTGCAGCTCGTGCGGCGAGGAAAAGCCGGACAAAAAGTGCTCCAAGTGCAAGGAGGTGCAGTACTGCGACCGGGAGTGCCAGCGGTTACACTGGTTCACCCACAAGAAGGTATGCAGCCGACCGTCTGGAGCGGCCGGCGAGGCACCGAACGCGGCCGCCGCCAAGGACATCGATTCGACGGAGATTAGCGAGCAGCTGCAAAAGTTGGTCGCCGGTTGAATGGAGAGGTTGGTGGCGGATTGCGGCGATAGGGAGGACACTTGCAAAGAGCACTATTTTATGTATGTCCCAGTGTACTGTATGTGTGTGTGTGTGTAATGGCAGGCGAAGACGAAGGTTAGGCAATATTGTACCGTAAGTGAGAAGAAGCTACAGTGTGTCTCGCACTTTTCGCATTTGGTCTGTGTCAGTAATGTGTAATAAGCTAAA]
[+] EMBL BM620076 [CCGCCCACGCGTCCGCGCTAGCCTACGAACATGCAGAGTCCGATATCATGAAACGACCACCCCGTGATCCCTTCAACGATAAACTTGTCAATGAGAGACTTATCTCGATGGCTTACGGTCAGATCGGTATGATTCAGGCTGCGGCCGGTTTCTTCGTGTACTTCGTCATCATGGCTGAGAACGGATTCCTGCCGCTGAAGCTGTTCGGTCTCCGCAAGAGCTGGGACTCGAAAGCCATCAACGATCTCACCGACTCGTACGGTCAGGAATGGACCTACCGCGATCGCAAGACCCTCGAGTTCACCTGCCACACCGCGTTCTTCGTGTCGATCGTCGTCGTACAGTGGGCCGATTTGATCATCTGTAAGACTCGCCGTAACTCGATTTTCCACCAGGGCATGAGAAACTGGGCCCTCAACTTCGGTCTCGTGTTCGAAACGGTACTGGCTGCCATCCTGTCCTACACGCCGGGCATGGACAAGGGTCTGCGCATGTACCCACTGAAATTCGTTTGGTGGCTACCAGCTTTACCGTTCAGCTTGTCCATCTTCGTG ]
[+] EMBL BX610261 [ GAACATGCAGAGTCCGATATCATGAAACGACCACCCCGTGTTCCCTTCAACGATAAACTTGTCAATGAGAGACTTATCTCGATGGCTTACGGTCATATCGGTATGATTCAGGCTGCGGCCGGTTTCTTCGTGTACTTCGTCATCATGGCTGAGAACGGATTCCTGCCGCTGAAGCTGTTCGGTCTCCGCAAGAGCTGGGACTCGAAAGCCATCAACGATCTCACCGACTCGTACGGTCAGGAATGGACCTACCGCGATCGCAAGACCCTCGAGTTCACCTGCCACACCGCGTTCTTCGTGTCGATCGTCGTCGTACAGTGGGCCGATTTGATCATCTGTAAGACTCGCCGTAACTCGATTTTCCACCAGGGCATGAGAAACTGGGCCCTCAACTTCGGTCTCGTGTTCGAAACGGTACTGGCTGCCATCCTGTCCTACACGCCGGGCATGGACAAGGGTCTGCGCATGTACCCACTGAAATTCGTTTGGTGGCTACCAGCTTTACCGTTCAGCTTGTCCATCTT ]
[+] EMBL BX608392 [ CGCATGTACCCACTGAAATTCGTTTGGTGGCTACCAGCTTTACCGTTCAGCTTGTCCATCTTCGTGTATGACGAAATTCGTCGCTTCTACTTGAGACGCAATCCAGGCGGCTGGCTAGAGCAAGAAACGTACTATTAGGTCAACAAATTTATATTTAAAAAGATTAATTAAAACAAAACCAACAAAAACCAACTCCCCCGCCCCCTGCACACACACACACACAAACAAACACACAGACACGTGCGGCCATCAATGGGCAGCGCGGCTTCCAGGACACGATCACGTACTGCAGCTCGTGCGGCGAGGAAAAGCCGGACAAAAAGTGCTCCAAGTGCAAGGAGGTGCAGTACTGCGACCGGGAGTGCCAGCGGTTACACTGGTTCACCCACAAGAAGGTATGCAGCCGACCGTCTGGAGCGGCCGGCGAGGCACCGAACGCGGCCGCCGCCAAGGACATCGATTCGACGGAGATTAGCGAGCAGCTGCAAAAGTTGGTCGCCGGTTGAATGGAGAGGTTGGTGGCGGATTGCGGCGATAGGGAGGACACTTGCAAAGAGCACTATTTTATGTATGTCCCAGTGTACTGTATGTGTGTGTGTGTGTAATGGCAGGCGAAGACGAAGGTTAGGCAATATTGTACCGTAAGTGAGAAGAAGCTACAGTGTGTCTCGCACTTTTCGCATTTGGTCTGTGTCAGTAATGTGTAATAAGCTAAA]
consensusID : consensus_8875#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 671 fasta sequence
[CCGCGGACGCGTGGGCGACTTTGGCTTCGACTTTGAGAACAACGACTTTGAAGTGAACGTGCAGCCGCTGGAGCCCAAGAAGGACGTGCTACTCTTCCACATGAGCTCGTGGCCGTACACCGGATACAAGGACATCGCCGATCTGCGCCCGATGGCCGAGCAGCCGAGCGTGCACATTCTGCACGATCGCGCCCAAACCACCAAGTCGTTCGAGCAGTCGTTCGGTCAGTCGCTGACCGGCGTTGCTCTGCGCTTCCAGGCCAAGTACGACAAGGACTTCATCGACTACGCCTACCTGATGAAGCACATTGAGCAGCACGACTACTGGTCTGCGCTGGTCTATCCGTTCGCCTCGGAGACCTACCACTACCATCAGTTTAACCTGTACTACGATGCTCAGCGCACCAGCGTGAAGAATGTCAAGTTTGTGCTGCAGCACAAGCAGGCCGACTACGACCAGGACTTCCAGACCGCCGACGTGAAACACCCGAAGAGTCGCCACGGATACTCTGGATTCTACAACGAGTACAACTACGCCCAGCCCTTCGTCTACTACGCCGGAAGCCAGCGCCGACAGGAGCAGTTCATGCGCAACGCTGGTGCCGGTATTCGCAACAGCGACGTCAATGTCTACGATTTCGGAATCGTGTTCGAGGGCAAGCAGCAGAAGG]
[+] EMBL BM595596 [CCGCGGACGCGTGGGCGACTTTGGCTTCGACTTTGAGAACAACGACTTTGAAGTGAACGTGCAGCCGCTGGAGCCCAAGAAGGACGTGCTACTCTTCCACATGAGCTCGTGGCCGTACACCGGATACAAGGACATCGCCGATCTGCGCCCGATGGCCGAGCAGCCGAGCGTGCACATTCTGCACGATCGCGCCCAAACCACCAAGTCGTTCGAGCAGTCGTTCGGTCAGTCGCTGACCGGCGTTGCTCTGCGCTTCCAGGCCAAGTACGACAAGGACTTCATCGACTACGCCTACCTGATGAAGCACATTGAGCAGCACGACTACTGGTCTGCGCTGGTCTATCCGTTCGCCTCGGAGACCTACCACTACCATCAGTTTAACCTGTACTACGATGCTCAGCGCACCAGCGTGAAGAATGTCAAGTTTGTGCTGCAGCACAAGCAGGCCGACTACGACCAGGACTTCCAGACCGCCGACGTGAAACACCCGAAGAGTCGCCACGGATACTCTGGATTCTACAACGAGTACAACTACGCCCAGCCCTTCGTCTACTACGCCGGAAGCCAGCGCCGACAGGAGCAGTTCATGCGCAACGCTGGTGCCGGTATTCGCAACAGCGACGTCAATGTCTACGATTTCGGAATCGTGTTCGAGGGCAAGCAGCAGAAGG]
consensusID : consensus_8875#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 586 fasta sequence
[CCGCGGTCCGGCTGCAAGCGTGCGCGCCCCAAGCTCCCTCTCTTTCCCTCTTTCCACCCTGCCCCCGCTCCTTCCTCCTCTTCTCCCCTCTAGCAGTGTGCTCCCAGCATCACAGGACACAGGAGCTTCTCTGCAATCAAACGAACCAGCGCAAGCACCGGCGGCGTCCCCAGCACCGATAATCCTGCCGTACACAGCACAACAACACAGCGCAATGGATAGTAAGGACGAGACGCGGGCACAGTCCCAGCAGGCGGACGAGGGGCTCGAACCGACGACCGCCGCCCTGGACCAGCTCGCCCTGTCGCTGCCGCTCGGGAAGAAGCGGGCGGGCCGGGGCGCGGTAGCGAGCGGGCTGACGCACGAGTGCGGCGTGTTCGGCGCGATTGCGACGGGCGAATGGCCGACGCAGATTGACGTGGCGCAGGTCATCTGTCTCGGGCTGGTGGCGCTGCAGCACCGCGGCCAGGAGTCGGCCGGCATCGTGACGAGCGAGGGCCACTGCGCGAAGAACTTCAACGTGCACAAGGGCATGGGCATGATCAACAACATCTTCACCGACGACTCGATGAAGAAGCTGAAGGGC]
[+] EMBL BM585678 [CCGCGGTCCGGCTGCAAGCGTGCGCGCCCCAAGCTCCCTCTCTTTCCCTCTTTCCACCCTGCCCCCGCTCCTTCCTCCTCTTCTCCCCTCTAGCAGTGTGCTCCCAGCATCACAGGACACAGGAGCTTCTCTGCAATCAAACGAACCAGCGCAAGCACCGGCGGCGTCCCCAGCACCGATAATCCTGCCGTACACAGCACAACAACACAGCGCAATGGATAGTAAGGACGAGACGCGGGCACAGTCCCAGCAGGCGGACGAGGGGCTCGAACCGACGACCGCCGCCCTGGACCAGCTCGCCCTGTCGCTGCCGCTCGGGAAGAAGCGGGCGGGCCGGGGCGCGGTAGCGAGCGGGCTGACGCACGAGTGCGGCGTGTTCGGCGCGATTGCGACGGGCGAATGGCCGACGCAGATTGACGTGGCGCAGGTCATCTGTCTCGGGCTGGTGGCGCTGCAGCACCGCGGCCAGGAGTCGGCCGGCATCGTGACGAGCGAGGGCCACTGCGCGAAGAACTTCAACGTGCACAAGGGCATGGGCATGATCAACAACATCTTCACCGACGACTCGATGAAGAAGCTGAAGGGC]
consensusID : consensus_8875#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 573 fasta sequence
[CGACCCACGCGTCCGAGCATTTCGGAGGAAAAGTGGTGGCATCGATGGCCGGCGCGCGATCGCCGTAGCGTCGCCGCACGGTCAGCAATACCGCCAGCTGCTGGTCGACACCATCGCGACCGCCCTCGTCCTTGTGCACAGCATCGTCTTCGTCGTCGTTGCGCCTGCAGTTAGCAGCATGATCGCCACCGCTACCGTAGTGTTAGTACAGCTTCGAACCAATTCATTGGCTTCGCTACGATCATGATGATACTCTCCGGAGAGACTAGGGCCAGAGGATATATGCGCGCGACTACCATCAGAATACTAGAAACACAGGAAGGAATGTGAAGGCCGGCAAGCAAGCGGCGGTTTAGCGATTCTATTACCAGCAAGCTGTGAATCAAGCATACCTGAACATACTAATTGCACCAGGCAAACAGACATAACAACAACAGCCCAAAAAGACAAAGAATTATGTAAAAGATTTTTAAAAGCCAACCCCGCCGCCGCCGTCACTGCCGCTGCTCCTTGTAGGACCGGAATCCAGGCTTTTGATTTGTGCAAACGCAACATTACTAGCTAAATATGGGC]
[+] EMBL BM620579 [CGACCCACGCGTCCGAGCATTTCGGAGGAAAAGTGGTGGCATCGATGGCCGGCGCGCGATCGCCGTAGCGTCGCCGCACGGTCAGCAATACCGCCAGCTGCTGGTCGACACCATCGCGACCGCCCTCGTCCTTGTGCACAGCATCGTCTTCGTCGTCGTTGCGCCTGCAGTTAGCAGCATGATCGCCACCGCTACCGTAGTGTTAGTACAGCTTCGAACCAATTCATTGGCTTCGCTACGATCATGATGATACTCTCCGGAGAGACTAGGGCCAGAGGATATATGCGCGCGACTACCATCAGAATACTAGAAACACAGGAAGGAATGTGAAGGCCGGCAAGCAAGCGGCGGTTTAGCGATTCTATTACCAGCAAGCTGTGAATCAAGCATACCTGAACATACTAATTGCACCAGGCAAACAGACATAACAACAACAGCCCAAAAAGACAAAGAATTATGTAAAAGATTTTTAAAAGCCAACCCCGCCGCCGCCGTCACTGCCGCTGCTCCTTGTAGGACCGGAATCCAGGCTTTTGATTTGTGCAAACGCAACATTACTAGCTAAATATGGGC]
consensusID : consensus_8875#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 367 fasta sequence
[TACACGTCTCTCTCTCACTCAAACCTAATGCTTACTCCCAGGTCTTAATGACTTCGTTGGCTGTTTCGTCGAACAAGTTTGGTTCGATTTGGCACACAGGTTTCAGGATCACAGGTTAACACACAAACACGCGTGGTGGTGGTGGTCGTCGTTGATGGTAGTCGGTGGTAGTCGTACACAGACGAGGGAGTGCAGAACGTCGAGGTCGGGGTCGGATCGGAAGGTCAACAACAACAGTAAGGTAAGACGAAGAAAAGTAAGGAGGAAGGAACAATCGATACGAGAGACGAGACGAGGGAAGAGAGAAAAAAAGAAGAAGANAAAAATAAAACATTATAGATAAACCGAACATTTGAGANAAATTATA]
[+] EMBL BX619261 [TACACGTCTCTCTCTCACTCAAACCTAATGCTTACTCCCAGGTCTTAATGACTTCGTTGGCTGTTTCGTCGAACAAGTTTGGTTCGATTTGGCACACAGGTTTCAGGATCACAGGTTAACACACAAACACGCGTGGTGGTGGTGGTCGTCGTTGATGGTAGTCGGTGGTAGTCGTACACAGACGAGGGAGTGCAGAACGTCGAGGTCGGGGTCGGATCGGAAGGTCAACAACAACAGTAAGGTAAGACGAAGAAAAGTAAGGAGGAAGGAACAATCGATACGAGAGACGAGACGAGGGAAGAGAGAAAAAAAGAAGAAGANAAAAATAAAACATTATAGATAAACCGAACATTTGAGANAAATTATA]
consensusID : consensus_8875#6 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 298 fasta sequence
[CCGCGGACGCGTGGGCCAGCAGCTGGGAATGAGTGTGTGGGCTCTGAAGAGGGAAAGAGGGGGGGAAATTGGTGGGAACACACACACCCCGCTGTCGAAGGGAGTAAAACCCCCGTGTGTGTACGTTAGAAAAAAGCCGAAGAAGGCGGAATATGTATAGCATGTGCGCGTACGCGAAACAAAACAGAGAAGAGTTACGTTGAATCGCTAAGATGATTATTAAGAAACTAATGGAAAGTTCAATTGCGGTAAAAATATTAAAGAAGAAGGAGAGAGATAGCTCATATAAAATACACAT]
[+] EMBL BM599935 [CCGCGGACGCGTGGGCCAGCAGCTGGGAATGAGTGTGTGGGCTCTGAAGAGGGAAAGAGGGGGGGAAATTGGTGGGAACACACACACCCCGCTGTCGAAGGGAGTAAAACCCCCGTGTGTGTACGTTAGAAAAAAGCCGAAGAAGGCGGAATATGTATAGCATGTGCGCGTACGCGAAACAAAACAGAGAAGAGTTACGTTGAATCGCTAAGATGATTATTAAGAAACTAATGGAAAGTTCAATTGCGGTAAAAATATTAAAGAAGAAGGAGAGAGATAGCTCATATAAAATACACAT]
consensusID : consensus_8875#7 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 139 fasta sequence
[GGAAACAAATGGGCAGCTCACGGCCCAGCCCAGGGGAGAGCAGCTGTAAAATCACACGACCACACAAAACCAAGGCAAGACAAGCAGCGCAGACAGAGGGGAACAAAAATTATACCAACGGGACAGAACAACCTGAGAG]
[+] EMBL BX604480 [GGAAACAAATGGGCAGCTCACGGCCCAGCCCAGGGGAGAGCAGCTGTAAAATCACACGACCACACAAAACCAAGGCAAGACAAGCAGCGCAGACAGAGGGGAACAAAAATTATACCAACGGGACAGAACAACCTGAGAG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_8875#0 TTGGCAATAGCGGCATCTTTATGCAAAAAGCGCTCAAAACCTCCTCCAAAAATCTTTAGT 60
consensus_8875#7 ------------------------------------------------------------
consensus_8875#5 ------------------------------------------------------------
consensus_8875#3 ------------------------------------------------------------
consensus_8875#6 ------------------------------------------------------------
consensus_8875#4 ------------------------------------------------------------
consensus_8875#1 ------------------------------------------------------------
consensus_8875#2 ------------------------------------------------------------
consensus_8875#0 CGTTTAGCAACTAGTGCTAATTACTGTACGAAAAAAAGGCTGTTCACCGTTTTGTTTCAT 120
consensus_8875#7 ------------------------------------------------------------
consensus_8875#5 ------------------------------------------------------------
consensus_8875#3 ------------------------------------------------------------
consensus_8875#6 ------------------------------------------------------------
consensus_8875#4 ------------------------------------------------------------
consensus_8875#1 ------------------------------------------------------------
consensus_8875#2 ------------------------------------------------------------
consensus_8875#0 TCTTCGTAAGGTTAACCAGTTTGTGGGTGGAAGATGGCCTGCATATAAGCGCCAGCATTA 180
consensus_8875#7 ------------------------------------------------------------
consensus_8875#5 ------------------------------------------------------------
consensus_8875#3 ------------------------------------------------------------
consensus_8875#6 ------------------------------------------------------------
consensus_8875#4 ------------------------------------------------------------
consensus_8875#1 ------------------------------------------------------------
consensus_8875#2 ------------------------------------------------------------
consensus_8875#0 TTAATTTGTAAGCGCATGAATGAATACGTAGACGATTAAATATAATAATTCTTCTACAGT 240
consensus_8875#7 ------------------------------------------------------------
consensus_8875#5 ------------------------------------------------------------
consensus_8875#3 ------------------------------------------------------------
consensus_8875#6 ------------------------------------------------------------
consensus_8875#4 ------------------------------------------------------------
consensus_8875#1 ------------------------------------------------------------
consensus_8875#2 ------------------------------------------------------------
consensus_8875#0 TGGGGTGGAAGGAGTATATTGCAGGACATTGATATCTGTTAACTACTTTCTCTACTCTAT 300
consensus_8875#7 ------------------------------------------------------------
consensus_8875#5 ------------------------------------------------------------
consensus_8875#3 ------------------------------------------------------------
consensus_8875#6 ------------------------------------------------------------
consensus_8875#4 ------------------------------------------------------------
consensus_8875#1 -----------------------------------------------CCGCCCACGCGTC 13
consensus_8875#2 ------------------------------------------------------------
consensus_8875#0 GTAATCTGTTTTGTTTGTAGCAAATTAGTTTGTTTAAGAGAGTAACACGCGAAGGAATAT 360
consensus_8875#7 ------------------------------------------------------------
consensus_8875#5 ------------------------------------------------------------
consensus_8875#3 ------------------------------------------------------------
consensus_8875#6 ------------------------------------------------------------
consensus_8875#4 ------------------------------------------------------------
consensus_8875#1 CGCGCTAGCCTACGAACATGCAGAGTCCGATATCATGAAACGACCACCCCGTGATCCCTT 73
consensus_8875#2 ------------------------------------------------------------
consensus_8875#0 CCCAGTTTCGGGACAATGAACGAATTTAGCAACGAAAACACATGGGGAATGGAACATTAG 420
consensus_8875#7 ------------------------------------------------------------
consensus_8875#5 ------------------------------------------------------------
consensus_8875#3 ------------------------------------------------------------
consensus_8875#6 ------------------------------------------------------------
consensus_8875#4 ------------------------------------------------------------
consensus_8875#1 CAACGATAAACTTGTCAATGAGAGACTTATCTCGATGGCTTACGGTCAGATCGGTATGAT 133
consensus_8875#2 ------------------------------------------------------------
consensus_8875#0 TTTATACTCGTTTACAATTCTACTCGTTCTCTTCCAATTAGGTAATTTTCAATTAACGCT 480
consensus_8875#7 ------------------------------------------------------------
consensus_8875#5 ------------------------------------------------------------
consensus_8875#3 ------------------------------------------------------------
consensus_8875#6 ------------------------------------------------------------
consensus_8875#4 ------------------------------------------------------------
consensus_8875#1 TCAGGCTGCGGCCGGTTTCTTCGTGTACTTCGTCATCATGGCTGAGAACGGATTCCTGCC 193
consensus_8875#2 ------------------------------------------------------------
consensus_8875#0 AGACAATAATGAGCGATCTTGAAGCTGTATGTTGTTAAATTTCACTCCTATATATGTAAA 540
consensus_8875#7 ------------------------------------------------------------
consensus_8875#5 ------------------------------------------------------------
consensus_8875#3 ------------------------------------------------------------
consensus_8875#6 ------------------------------------------------------------
consensus_8875#4 ------------------------------------------------------------
consensus_8875#1 GCTGAAGCTGTTCGGTCTCCGCAAGAGCTGGGACTCGAAAGCCATCAACGATCTCACCGA 253
consensus_8875#2 ------------------------------------------------------------
consensus_8875#0 GTTTATTTTGTTTCTTGTTTTATTTGCACTTTCCCCTTACCCACTCCCCTTCATAAGCAT 600
consensus_8875#7 ------------------------------------------------------------
consensus_8875#5 ------------------------------------------------------------
consensus_8875#3 ------------------------------------------------------------
consensus_8875#6 ------------------------------------------------------------
consensus_8875#4 ------------------------------------------------------------
consensus_8875#1 CTCGTACGGTCAGGAATGGACCTACCGCGATCGCAAGACCCTCGAGTTCACCTGCCACAC 313
consensus_8875#2 ------------------------------------------------------------
consensus_8875#0 TAGCAGCCAGATCGGTATAAGTAGCCGAACTTAAAGTAAACGTCTTATCCACAATGCTTA 660
consensus_8875#7 ------------------------------------------------------------
consensus_8875#5 ------------------------------------------------------------
consensus_8875#3 ------------------------------------------------------------
consensus_8875#6 ------------------------------------------------------------
consensus_8875#4 ------------------------------------------------------------
consensus_8875#1 CGCGTTCTTCGTGTCGATCGTCGTCGTACAGTGGGCCGATTTGATCATCTGTAAGACTCG 373
consensus_8875#2 ------------------------------------------------------------
consensus_8875#0 GTATCATATTATTCCAATTGCCCTTAGCTACAACACGTGTAGGAGGACACATTTAAAGTA 720
consensus_8875#7 ------------------------------------------------------------
consensus_8875#5 ------------------------------------------------------------
consensus_8875#3 ------------------------------------------------------------
consensus_8875#6 ------------------------------------------------------------
consensus_8875#4 ------------------------------------------------------------
consensus_8875#1 CCGTAACTCGATTTTCCACCAGGGCATGAGAAACTGGGCCCTCAACTTCGGTCTCGTGTT 433
consensus_8875#2 ------------------------------------------------------------
consensus_8875#0 CGTTGCGCAAGCGCATGCGCAATACAGGGTTTTCCAGGGATTCTCATAGTTGTGGGACAC 780
consensus_8875#7 ------------------------------------------------------------
consensus_8875#5 ------------------------------------------------------------
consensus_8875#3 ------------------------------------------------------------
consensus_8875#6 ------------------------------------------------------------
consensus_8875#4 ------------------------------------------------------------
consensus_8875#1 CGAAACGGTACTGGCTGCCATCCTGTCCTACACGCCGGGCATGGACAAGGGTCTGCGCAT 493
consensus_8875#2 ------------------------------------------------------CCGCGG 6
consensus_8875#0 TTCCTTGACTCTTTCTTATGCGAAGTGAACTTCATATGTTGGAAATTGGACTCTATGGCG 840
consensus_8875#7 ------------------------------------------------------------
consensus_8875#5 ------------------------------------------------------------
consensus_8875#3 ------------------------------------------------------------
consensus_8875#6 ------------------------------------------------------------
consensus_8875#4 ------------------------------------------------------------
consensus_8875#1 GTACCCACTGAAATTCGTTTGGTGGCTACCAGCTTTACCGTTCAGCTTGTCCATCTTCGT 553
consensus_8875#2 ACGCGTGGGCGACTTTGGCTTCGACTTTGAGAACAACGACTTTGAAGTGAACGTGCAGCC 66
consensus_8875#0 CCCTTTTTGGACAGGTGCCTTGGAAATTCCAATTGGATGTGTCCAACAAGGGTGCTATAG 900
consensus_8875#7 ------------------------------------------------------------
consensus_8875#5 ------------------------------------------------------------
consensus_8875#3 ------------------------------------------------------------
consensus_8875#6 ------------------------------------------------------------
consensus_8875#4 ------------------------------CGACCCACGCGTCCGAGCATTTCGGAGGAA 30
consensus_8875#1 GTATGACGAAATTCGTCGCTTCTACTTGAGACGCAATCCAGGCGGCTGGCTAGAGCAAGA 613
consensus_8875#2 GCTGGAGCCCAAGAAGGACGTGCTACTCTTCCACATGAGCTCGTGGCCGTACACCGGATA 126
consensus_8875#0 AGTCCAATTCCCATTACATTAAGTTCATTTCATGTAGGAAAGAGTCTATATAGTGTCCCA 960
consensus_8875#7 ------------------------------------------------------------
consensus_8875#5 ------------------------------------------------------------
consensus_8875#3 ------------------CCGCGGTCCGGCTGCAAGCGTGCGCGCCCCAAGCTCCCTCTC 42
consensus_8875#6 ------------------------------------------------------------
consensus_8875#4 AAGTGGTGGCATCGATGGCCGGCGCGCGATCGCCGTAGCGTCGCCGCACGGTCAGCAATA 90
consensus_8875#1 AACGTACTATTAGGTCAACAAATTTATATTTAAAAAGATTAATTAAAACAAAACCAACAA 673
consensus_8875#2 CAAGGACATCGCCGATCTGCGCCCGATGGCCGAGCAGCCGAGCGTGCACATTCTGCACGA 186
consensus_8875#0 CAGCTACGAGAACTCCTGGAAAACCCTGTATCATCAATATCAGCGTTTCACTGTTTC-GT 1019
consensus_8875#7 ------------------------------------------------------------
consensus_8875#5 --TACACGTCTCTCTCTCACTCAAACCTAATGCTTACTCCCAGGTCTTAATGACTTC-GT 57
consensus_8875#3 TTTCCCTCTTTCCACCCTGCCCCCGCTCCTTCCTCCTCTTCTCCCCTCTAGCAGTGT-GC 101
consensus_8875#6 ------------------------------------------------------------
consensus_8875#4 CCGCCAGCTGCTGGTCGACACCATCGCGACCGCCCTCGTCCTTGTGCACAGCATCGT-CT 149
consensus_8875#1 AAACCAACTCCCCCGCCCCCTGCACACACACACACACAAACAAACACACAGACACGT-GC 732
consensus_8875#2 TCGCGCCCAAACCACCAAGTCGTTCGAGCAGTCGTTCGGTCAGTCGCTGACCGGCGTTGC 246
consensus_8875#0 TCCTTTCGTTCGACGACT-----GGCAACAAGTGGGCAATGTAACGTAATGGAACACTAT 1074
consensus_8875#7 ------------------------------------------------------------
consensus_8875#5 TGGCTGTTTCGTCGAACA-----AGTTTGGTTCGATTTGGCACACAGGTTTCAGGATCAC 112
consensus_8875#3 TCCCAGCATCACAGGACACAGGAGCTTCTCTGCAATCAAACGAACCAGCGCAAGCACCGG 161
consensus_8875#6 ---------------------CCGCGGACGCGTGGGCCAGCAGCTGGGAATGAGTGTGTG 39
consensus_8875#4 TCGTCGTCGTTGCGCCTGCAGTTAGCAGCATGATCGCCACCGCTACCGTAGTGTTAGTAC 209
consensus_8875#1 GGCCATCAATGGGCAGCGCGGCTTCCAGGACACGATCACGTACTGCAGCTCGTGCGGCGA 792
consensus_8875#2 TCTGCGCTTCCAGGCCAAGTACGACAAGGACTTCATCGACTACGCCTACCTGATGAAGCA 306
consensus_8875#0 AAATAAACCGAATGTGCGAATGTTTGCCATTATGTAGGTGATGATGGAAT-GATAAAGTA 1133
consensus_8875#7 ------------------------------------------------------------
consensus_8875#5 AGGTTAAC-----ACACAAACACGCGTGGTGGTGGTGGTCGTCGTTGA-T-GGTAGTCGG 165
consensus_8875#3 CGGCGTCCCCAGCACCGATAATCCTGCCGT-ACACAGCACAACAACACAG-CGCAATGGA 219
consensus_8875#6 GGCTCTGAAGAGGGAAAGAGGGGGGGAAATTGGTGGGAACACACACACCC-CGCTGTCGA 98
consensus_8875#4 AGCTTCGAACCAATTCATTGGCTTCGCTACGATCATGATGATACTCTCCG-GAGAGACTA 268
consensus_8875#1 GGAAAAGCC--GGACAAAAAGTGCTCCAAGTGCAAGGAGGTGCAGTACTG-CGACCGGGA 849
consensus_8875#2 CATTGAGCAGCACGACTACTGGTCTGCGCTGGTCTATCCGTTCGCCTCGGAGACCTACCA 366
consensus_8875#0 AAGCTCCTCCCGGTTTCCCTCCGCATACGGTCAGTCCGTTGAGGCTACCAGCTCACCAGC 1193
consensus_8875#7 -------------------------------------------GGAAACAAATGGGCAGC 17
consensus_8875#5 TGGTAGTCGTACACAGACGAGGGAGTGCAGAACGTCGAGGTCGGGGTCGGATCGGAAGGT 225
consensus_8875#3 TAGTAAGGACGAGACGCGGGCACAGTCCCAGCAGGCGGACGAGGGGCTCGAACCGACGAC 279
consensus_8875#6 AGGGAGTAAAACCCCCGTGTGTGTACGTTAGAAAAAAGCCGAAGAAGGCGGAATATGTAT 158
consensus_8875#4 GGGCCAGAGGATATATGCGCGCGACTACCATCAGAATACTAGAAACACAGGAAGGAATGT 328
consensus_8875#1 GTGCCAGCGGTTACACTGGTTCACCCACAAGAAGGTATGCAGCCGACCGTCTGGAGCGGC 909
consensus_8875#2 CTACCATCAGTTTAACCTGTACTACGATGCTCAGCGCACCAGCGTGAA-GAATGTCAAGT 425
consensus_8875#0 ACACATCC-TT-ATCCGATATCAACGTGTTCAGTGTTTTTTGTGTTACTATC-CTATTTA 1250
consensus_8875#7 TCACGGCC-CA-GCCCA-----GGGGAGAGCAGC-TGTAAAATCACACGACC-ACACAAA 68
consensus_8875#5 CAACAACAACA-GTAAGGTAAGACGAAGAAAAGTAAGGAGGAAGGAACAATCGATACGAG 284
consensus_8875#3 CGCCGCCCTGG-ACCAGCTCGCCCTGTCGCTGCCGCTCGGGAAGAAGCGGGCGGGCCGGG 338
consensus_8875#6 AGCATGTGCGC-GTACGCGAAACAAAACAGAGAAGAGTTACGTTGAATCGCTAAGATGAT 217
consensus_8875#4 GAAGGCCGGCAAGCAAGCGGCGGTTTAGCGATTCTATTACCAGCAAGCTGTGAATCAAGC 388
consensus_8875#1 CGGCGAGGCACCGAACGCGGCCGCCGCCAAGGACATCGATTCGACGGAGATTAGCGAGCA 969
consensus_8875#2 TTGTGCTGCAGCACAAGC--AGGCCGACTACGACCAGGACTTCCAGACCGCCGACGTGAA 483
consensus_8875#0 AC---CAA-AGGAAGAGAAGAAAGGCA-AA-GGAAAGGATTAGGAGATGAGCAGAGAGGG 1304
consensus_8875#7 AC---CAA-GGCAAGACAAGCAGCGCA-GACAGAGGGGAACAAAAATTATACCAACGGGA 123
consensus_8875#5 AGA--CGA-GACGAGGGAAGAGAGAAA-AAAAGAAGAAGANAAAAATAAAACATTATAGA 340
consensus_8875#3 GCG--CGGTAGCGAGCGGGCTGACGCACGAGTGCGGCGTGTTCGGCGCGATTGCGACGGG 396
consensus_8875#6 TAT--TAA--GAAACTAATGGAAAGTTCAATTGCGGTAAAAATATTAAAGAAGAAGGAGA 273
consensus_8875#4 ATA--CCTGAACATACTAATTGCACCAGGCAAACAGACATAACAACAACAGCCCAAAAAG 446
consensus_8875#1 GCT--GCAAAAGTTGGTCGCCGGTTGAATGGAGAGGTTGGTGGCGGATTGCGGCGATAGG 1027
consensus_8875#2 ACACCCGAAGAGTCGCCACGGATACTCTGGATTCTACAACGAGTACAACTACGCCCAGCC 543
consensus_8875#0 GGG-AAAAACCATGCGTAGGGGATCTAGCAAGTGTCTACATTAGGCTACAGGCGTGTACG 1363
consensus_8875#7 CAG-AACAACC-TGAGAG------------------------------------------ 139
consensus_8875#5 TAA-ACCGAACATTTGAGANAAATTATA-------------------------------- 367
consensus_8875#3 CGA-ATGGCCGACGCAGATTGACGTGGCGCAGGTCATCTGTCTCGGGCTGGTGGCGCTGC 455
consensus_8875#6 GAG-ATAGCTCATATAAAATACACAT---------------------------------- 298
consensus_8875#4 ACA-AAGAATTATGTAAAA-GATTTTTAAAAGCCAACCCCGCCGCCGCCGTCACTGCCGC 504
consensus_8875#1 GAG-GACACTTGCAAAGAGCACTATTTTATGTATGTCCCAGTGTACTGTATGTGTGTGTG 1086
consensus_8875#2 CTTCGTCTACTACGCCGGAAGCCAGCGCCGACAGGAGCAGTTCATGCGCAACGCTGGTGC 603
consensus_8875#0 TGTTGCGTATCCGTTTCTATTATTCCAGGACAGCAGAGGAAAGACACACATACACTAAAT 1423
consensus_8875#7 ------------------------------------------------------------
consensus_8875#5 ------------------------------------------------------------
consensus_8875#3 AGCACCGCGGCCAGGAGTCGGCCGGCATCGTGACGAGCGAGGGCCACTGCGCGAAGAACT 515
consensus_8875#6 ------------------------------------------------------------
consensus_8875#4 TGCTCCTTGTAGGACCGGAATCCAGGCTTTTGATTTGTGCAAACGCAACATTACTAGCTA 564
consensus_8875#1 TGTGTAATGGCAGGCGAAGACGAAGGTTAGGCAATATTGTACCGTAAGTGAGAAGAAGCT 1146
consensus_8875#2 CGGTATTCGCAACAGCGACGTCAATGTCTACGATTTCGGAATCGTGTTCGAGGGCAAGCA 663
consensus_8875#0 AGACCATTTGGATTT--------------------------------------------- 1438
consensus_8875#7 ------------------------------------------------------------
consensus_8875#5 ------------------------------------------------------------
consensus_8875#3 TCAACGTGCACAAGGGCATGGGCATGATCAACAACATCTTCACCGACGACTCGATGAAGA 575
consensus_8875#6 ------------------------------------------------------------
consensus_8875#4 AATATGGGC--------------------------------------------------- 573
consensus_8875#1 ACAGTGTGTCTCGCACTTTTCGCATTTGGTCTGTGTCAGTAATGTGTAATAAGCTAAA-- 1204
consensus_8875#2 GCAGAAGG---------------------------------------------------- 671
consensus_8875#0 -----------
consensus_8875#7 -----------
consensus_8875#5 -----------
consensus_8875#3 AGCTGAAGGGC 586
consensus_8875#6 -----------
consensus_8875#4 -----------
consensus_8875#1 -----------
consensus_8875#2 -----------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||