These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8875#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1438 fasta sequence [TTGGCAATAGCGGCATCTTTATGCAAAAAGCGCTCAAAACCTCCTCCAAAAATCTTTAGTCGTTTAGCAACTAGTGCTAATTACTGTACGAAAAAAAGGCTGTTCACCGTTTTGTTTCATTCTTCGTAAGGTTAACCAGTTTGTGGGTGGAAGATGGCCTGCATATAAGCGCCAGCATTATTAATTTGTAAGCGCATGAATGAATACGTAGACGATTAAATATAATAATTCTTCTACAGTTGGGGTGGAAGGAGTATATTGCAGGACATTGATATCTGTTAACTACTTTCTCTACTCTATGTAATCTGTTTTGTTTGTAGCAAATTAGTTTGTTTAAGAGAGTAACACGCGAAGGAATATCCCAGTTTCGGGACAATGAACGAATTTAGCAACGAAAACACATGGGGAATGGAACATTAGTTTATACTCGTTTACAATTCTACTCGTTCTCTTCCAATTAGGTAATTTTCAATTAACGCTAGACAATAATGAGCGATCTTGAAGCTGTATGTTGTT-AAATTTCACTCCTATATATGTAAAGTTTA-TTTTGTTTCTTGTTTTATTTGCACTTTCCCCTTACCCACTCCCCTTCATAAGCATTAGCAGCCAGATCGGTATAAGTAGCCGAACTTAAAGTAAACGTCTTATCCACAATGCTTAGTATCATATTATTCCAATTGCCCTTAGCTACAACACGTGTAGGAGGACACATTTAAAGTACGTTGCGCAAGCGCATGCGCAATACAGGGTTTTCCAGGGATTCTCATAGTTGTGGGACACTTCCTTGACTCTTTCTTATGCGAAGTGAACTTCATATGTTGGAAATTGGACTCTATGGCGCCCTTTTTGGACAGGTGCCTTGGAAATTCCAATTGGATGTGTCCAACAAGGGTGCTATAGAGTCCAATTCCCATTACATTAAGTTCATTTCATGTAGGAAAGAGTCTATATAGTGTCCCACAGCTACGAGAACTCCTGGAAAACCCTGTATCATCAATATCAGCGTTTCACTGTTTCGTTCCTTTCGTTCGACGACTGGCAACAAGTGGGCAATGTAACGTAATGGAACACTATAAATAAACCGAATGTGCGAATGTTTGCCATTATGTAGGTGATGATGGAATGATAAAGTAAAGCTCCTCCCGGTTTCCCTCCGCATACGGTCAGTCCGTTGAGGCTACCAGCTCACCAGCACACATCCTTATCCGATATCAACGTGTTCAGTGTTTTTTGTGTTACTATCCTATTTAACCAAAGGAAGAGAAGAAAGGCAAAGGAAAGGATTAGGAGATGAGCAGAGAGGGGGGAAAAACCATGCGTAGGGGATCTAGCAAGTGTCTACATTAGGCTACAGGCGTGTACGTGTTGCGTATCCGTTTCTATTATTCCAGGACAGCAGAGGAAAGACACACATACACTAAATAGACCATTTGGATTT] [-] EMBL BM634151 [TTGGCAATAGCGGCATCTTTATGCAAAAAGCGCTCAAAACCTCCTCCAAAAATCTTTAGTCGTTTAGCAACTAGTGCTAATTACTGTACGAAAAAAAGGCTGTTCACCGTTTTGTTTCATTCTTCGTAAGGTTAACCAGTTTGTGGGTGGAAGATGGCCTGCATATAAGCGCCAGCATTATTAATTTGTAAGCGCATGAATGAATACGTAGACGATTAAATATAATAATTCTTCTACAGTTGGGGTGGAAGGAGTATATTGCAGGACATTGATATCTGTTAACTACTTTCTCTACTCTATGTAATCTGTTTTGTTTGTAGCAAATTAGTTTGTTTAAGAGAGTAACACGCGAAGGAATATCCCAGTTTCGGGACAATGAACGAATTTAGCAACGAAAACACATGGGGAATGGAACATTAGTTTATACTCGTTTACAATTCTACTCGTTCTCTTCCAATTAGGTAATTTTCAATTAACGCTAGACAATAATGAGCGATCTTGAAGCTGTATGTTGTT AAATTTCACTCCTATATATGTAAAGTTTATTTTTGTTTCTTGTTTTATTTGCACTTTCCCCTTACCCACTCCCCTTCATAAGCATTAGCAGCCAGATCGATATAAGTAGCCGAACTTAAAGTAAACGTCTTATCCACAATGCTTAGTATGATATTATTCCAATTGCCCTTAGCTACAACACGTGTAGGAGGACgg ] [+] EMBL BX621412 [ AAAATCTTTAGTCGTTTAGCAACTAGTGCTAATTACTGTACGAAAAAAAGGCTGTTCACCGTTTTGTTTCATTCTTCGTAAGGTTAACCAGTTTGTGGGTGGAAGATGGCCTGCATATAAGCGCCAGCATTATTAATTTGTAAGCGCATGAATGAATACGTAGACGATTAAATATAATAATTCTTCTACAGTTGGGGTGGAAGGAGTATATTGCAGGACATTGATATCTGTTAACTACTTTCTCTACTCTATGTAAACTGTTTTGTTTGTAGAAAATTAGTTTGTTTGAGAGAGTAACACGCGAAGGAATATCCCAGTTTCGGGACCATGAACGAATTTAGCAACGAAAACACATGGGGAATGGAACATTGGTTTATACTCGTTTACAATTCTACTCGTTCTCTTCCAATTAGGTAATTTTCAACTAACGCTAGACAATAATGAGCGATCTTGAAGCTGTATGTTGTTAAAATTTCACTCCTATATATGTAAAGTTTA TTTTGTTTCTTGTTTTATTTGCACTTTCCCCTTACCCACTCCCCTTCATAAGCATTAGCAGCCAGATCGGTATAAGTAGCCGAACTTAAAGTAAACGTCTTATCCACAATGCTTAGTATCATATTATTCCAATTGCCCTTAGCTACAACACGTGTAGGAGGATACATTTAAAGTACGTTG ] [+] EMBL BX613335 [ TTTGCACTTTCCCCTTACCCACTCCCCTTCATAAGCATTAGCAGCCAGATCGGTATAAGTAGCCGAACTTAAAGTAAACGTCTTATCCACAATGCTTAGTATCATATTATTCCAATTGCCCTTAGCTACAACACGTGTAGGAGGACACATTTAAAGTACGTTGCGCAAGCGCATGCGCAATACAGGGTTTTCCAGGGATTCTCATAGTTGTGGGACACTTCCTTGACTCTTTCTTATGCGAAGTGAACTTCATATGTTGGAAATTGGACTCTATGGCGCCCTTTTTGGACAGGTGCCTTGGAAATTCCAATTGGATGTGTCCAACAAGGGTGCTATAGAGTCCAATTCCCATTACATTAAGTTCATTTCATGTAGGAAAGAGTCTATATAGTGTCCCACAGCTACGAGAACTCCTGGAAAACCCTGTATCATCAATATCAGCGTTTCACTGTTTCGTTCCTTTCGTTCGACGACTGGCAACAAGTGGGCAATGTAACGTAATGGAACACTATAAATAAACCGAATGTGCGAATGTTTGCCATTATGTAGGTGATGATGGAATGATAAAGTAAAGCTCCTCCCGGTTTCCCTCCGCATACGGTCAGTCCGTTGAGGCTACCAGCTCACCAGCACACATCCTTATCCGATATCAACGTGTTCAGTGTTTTTTGTGTTACTATCCTATTTAACCAAAGGAAGAGAAGAAAGGCAAAGGAAAGGATTAGGAGATGAGCAGAGAGGGGGGAAAAACCATGCGTAGGGGATCTAGCAAGTGTCTACATTAGGCTACAGGCGTGTACGTGTTGCGTATCCGTTTCTATTATTCCAGGACAGCAGAGGAAAGACACACATACACTAAATAGACCATTTGGATTT] consensusID : consensus_8875#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1204 fasta sequence [CCGCCCACGCGTCCGCGCTAGCCTACGAACATGCAGAGTCCGATATCATGAAACGACCACCCCGTGATCCCTTCAACGATAAACTTGTCAATGAGAGACTTATCTCGATGGCTTACGGTCAGATCGGTATGATTCAGGCTGCGGCCGGTTTCTTCGTGTACTTCGTCATCATGGCTGAGAACGGATTCCTGCCGCTGAAGCTGTTCGGTCTCCGCAAGAGCTGGGACTCGAAAGCCATCAACGATCTCACCGACTCGTACGGTCAGGAATGGACCTACCGCGATCGCAAGACCCTCGAGTTCACCTGCCACACCGCGTTCTTCGTGTCGATCGTCGTCGTACAGTGGGCCGATTTGATCATCTGTAAGACTCGCCGTAACTCGATTTTCCACCAGGGCATGAGAAACTGGGCCCTCAACTTCGGTCTCGTGTTCGAAACGGTACTGGCTGCCATCCTGTCCTACACGCCGGGCATGGACAAGGGTCTGCGCATGTACCCACTGAAATTCGTTTGGTGGCTACCAGCTTTACCGTTCAGCTTGTCCATCTTCGTGTATGACGAAATTCGTCGCTTCTACTTGAGACGCAATCCAGGCGGCTGGCTAGAGCAAGAAACGTACTATTAGGTCAACAAATTTATATTTAAAAAGATTAATTAAAACAAAACCAACAAAAACCAACTCCCCCGCCCCCTGCACACACACACACACAAACAAACACACAGACACGTGCGGCCATCAATGGGCAGCGCGGCTTCCAGGACACGATCACGTACTGCAGCTCGTGCGGCGAGGAAAAGCCGGACAAAAAGTGCTCCAAGTGCAAGGAGGTGCAGTACTGCGACCGGGAGTGCCAGCGGTTACACTGGTTCACCCACAAGAAGGTATGCAGCCGACCGTCTGGAGCGGCCGGCGAGGCACCGAACGCGGCCGCCGCCAAGGACATCGATTCGACGGAGATTAGCGAGCAGCTGCAAAAGTTGGTCGCCGGTTGAATGGAGAGGTTGGTGGCGGATTGCGGCGATAGGGAGGACACTTGCAAAGAGCACTATTTTATGTATGTCCCAGTGTACTGTATGTGTGTGTGTGTGTAATGGCAGGCGAAGACGAAGGTTAGGCAATATTGTACCGTAAGTGAGAAGAAGCTACAGTGTGTCTCGCACTTTTCGCATTTGGTCTGTGTCAGTAATGTGTAATAAGCTAAA] [+] EMBL BM620076 [CCGCCCACGCGTCCGCGCTAGCCTACGAACATGCAGAGTCCGATATCATGAAACGACCACCCCGTGATCCCTTCAACGATAAACTTGTCAATGAGAGACTTATCTCGATGGCTTACGGTCAGATCGGTATGATTCAGGCTGCGGCCGGTTTCTTCGTGTACTTCGTCATCATGGCTGAGAACGGATTCCTGCCGCTGAAGCTGTTCGGTCTCCGCAAGAGCTGGGACTCGAAAGCCATCAACGATCTCACCGACTCGTACGGTCAGGAATGGACCTACCGCGATCGCAAGACCCTCGAGTTCACCTGCCACACCGCGTTCTTCGTGTCGATCGTCGTCGTACAGTGGGCCGATTTGATCATCTGTAAGACTCGCCGTAACTCGATTTTCCACCAGGGCATGAGAAACTGGGCCCTCAACTTCGGTCTCGTGTTCGAAACGGTACTGGCTGCCATCCTGTCCTACACGCCGGGCATGGACAAGGGTCTGCGCATGTACCCACTGAAATTCGTTTGGTGGCTACCAGCTTTACCGTTCAGCTTGTCCATCTTCGTG ] [+] EMBL BX610261 [ GAACATGCAGAGTCCGATATCATGAAACGACCACCCCGTGTTCCCTTCAACGATAAACTTGTCAATGAGAGACTTATCTCGATGGCTTACGGTCATATCGGTATGATTCAGGCTGCGGCCGGTTTCTTCGTGTACTTCGTCATCATGGCTGAGAACGGATTCCTGCCGCTGAAGCTGTTCGGTCTCCGCAAGAGCTGGGACTCGAAAGCCATCAACGATCTCACCGACTCGTACGGTCAGGAATGGACCTACCGCGATCGCAAGACCCTCGAGTTCACCTGCCACACCGCGTTCTTCGTGTCGATCGTCGTCGTACAGTGGGCCGATTTGATCATCTGTAAGACTCGCCGTAACTCGATTTTCCACCAGGGCATGAGAAACTGGGCCCTCAACTTCGGTCTCGTGTTCGAAACGGTACTGGCTGCCATCCTGTCCTACACGCCGGGCATGGACAAGGGTCTGCGCATGTACCCACTGAAATTCGTTTGGTGGCTACCAGCTTTACCGTTCAGCTTGTCCATCTT ] [+] EMBL BX608392 [ CGCATGTACCCACTGAAATTCGTTTGGTGGCTACCAGCTTTACCGTTCAGCTTGTCCATCTTCGTGTATGACGAAATTCGTCGCTTCTACTTGAGACGCAATCCAGGCGGCTGGCTAGAGCAAGAAACGTACTATTAGGTCAACAAATTTATATTTAAAAAGATTAATTAAAACAAAACCAACAAAAACCAACTCCCCCGCCCCCTGCACACACACACACACAAACAAACACACAGACACGTGCGGCCATCAATGGGCAGCGCGGCTTCCAGGACACGATCACGTACTGCAGCTCGTGCGGCGAGGAAAAGCCGGACAAAAAGTGCTCCAAGTGCAAGGAGGTGCAGTACTGCGACCGGGAGTGCCAGCGGTTACACTGGTTCACCCACAAGAAGGTATGCAGCCGACCGTCTGGAGCGGCCGGCGAGGCACCGAACGCGGCCGCCGCCAAGGACATCGATTCGACGGAGATTAGCGAGCAGCTGCAAAAGTTGGTCGCCGGTTGAATGGAGAGGTTGGTGGCGGATTGCGGCGATAGGGAGGACACTTGCAAAGAGCACTATTTTATGTATGTCCCAGTGTACTGTATGTGTGTGTGTGTGTAATGGCAGGCGAAGACGAAGGTTAGGCAATATTGTACCGTAAGTGAGAAGAAGCTACAGTGTGTCTCGCACTTTTCGCATTTGGTCTGTGTCAGTAATGTGTAATAAGCTAAA] consensusID : consensus_8875#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 671 fasta sequence [CCGCGGACGCGTGGGCGACTTTGGCTTCGACTTTGAGAACAACGACTTTGAAGTGAACGTGCAGCCGCTGGAGCCCAAGAAGGACGTGCTACTCTTCCACATGAGCTCGTGGCCGTACACCGGATACAAGGACATCGCCGATCTGCGCCCGATGGCCGAGCAGCCGAGCGTGCACATTCTGCACGATCGCGCCCAAACCACCAAGTCGTTCGAGCAGTCGTTCGGTCAGTCGCTGACCGGCGTTGCTCTGCGCTTCCAGGCCAAGTACGACAAGGACTTCATCGACTACGCCTACCTGATGAAGCACATTGAGCAGCACGACTACTGGTCTGCGCTGGTCTATCCGTTCGCCTCGGAGACCTACCACTACCATCAGTTTAACCTGTACTACGATGCTCAGCGCACCAGCGTGAAGAATGTCAAGTTTGTGCTGCAGCACAAGCAGGCCGACTACGACCAGGACTTCCAGACCGCCGACGTGAAACACCCGAAGAGTCGCCACGGATACTCTGGATTCTACAACGAGTACAACTACGCCCAGCCCTTCGTCTACTACGCCGGAAGCCAGCGCCGACAGGAGCAGTTCATGCGCAACGCTGGTGCCGGTATTCGCAACAGCGACGTCAATGTCTACGATTTCGGAATCGTGTTCGAGGGCAAGCAGCAGAAGG] [+] EMBL BM595596 [CCGCGGACGCGTGGGCGACTTTGGCTTCGACTTTGAGAACAACGACTTTGAAGTGAACGTGCAGCCGCTGGAGCCCAAGAAGGACGTGCTACTCTTCCACATGAGCTCGTGGCCGTACACCGGATACAAGGACATCGCCGATCTGCGCCCGATGGCCGAGCAGCCGAGCGTGCACATTCTGCACGATCGCGCCCAAACCACCAAGTCGTTCGAGCAGTCGTTCGGTCAGTCGCTGACCGGCGTTGCTCTGCGCTTCCAGGCCAAGTACGACAAGGACTTCATCGACTACGCCTACCTGATGAAGCACATTGAGCAGCACGACTACTGGTCTGCGCTGGTCTATCCGTTCGCCTCGGAGACCTACCACTACCATCAGTTTAACCTGTACTACGATGCTCAGCGCACCAGCGTGAAGAATGTCAAGTTTGTGCTGCAGCACAAGCAGGCCGACTACGACCAGGACTTCCAGACCGCCGACGTGAAACACCCGAAGAGTCGCCACGGATACTCTGGATTCTACAACGAGTACAACTACGCCCAGCCCTTCGTCTACTACGCCGGAAGCCAGCGCCGACAGGAGCAGTTCATGCGCAACGCTGGTGCCGGTATTCGCAACAGCGACGTCAATGTCTACGATTTCGGAATCGTGTTCGAGGGCAAGCAGCAGAAGG] consensusID : consensus_8875#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 586 fasta sequence [CCGCGGTCCGGCTGCAAGCGTGCGCGCCCCAAGCTCCCTCTCTTTCCCTCTTTCCACCCTGCCCCCGCTCCTTCCTCCTCTTCTCCCCTCTAGCAGTGTGCTCCCAGCATCACAGGACACAGGAGCTTCTCTGCAATCAAACGAACCAGCGCAAGCACCGGCGGCGTCCCCAGCACCGATAATCCTGCCGTACACAGCACAACAACACAGCGCAATGGATAGTAAGGACGAGACGCGGGCACAGTCCCAGCAGGCGGACGAGGGGCTCGAACCGACGACCGCCGCCCTGGACCAGCTCGCCCTGTCGCTGCCGCTCGGGAAGAAGCGGGCGGGCCGGGGCGCGGTAGCGAGCGGGCTGACGCACGAGTGCGGCGTGTTCGGCGCGATTGCGACGGGCGAATGGCCGACGCAGATTGACGTGGCGCAGGTCATCTGTCTCGGGCTGGTGGCGCTGCAGCACCGCGGCCAGGAGTCGGCCGGCATCGTGACGAGCGAGGGCCACTGCGCGAAGAACTTCAACGTGCACAAGGGCATGGGCATGATCAACAACATCTTCACCGACGACTCGATGAAGAAGCTGAAGGGC] [+] EMBL BM585678 [CCGCGGTCCGGCTGCAAGCGTGCGCGCCCCAAGCTCCCTCTCTTTCCCTCTTTCCACCCTGCCCCCGCTCCTTCCTCCTCTTCTCCCCTCTAGCAGTGTGCTCCCAGCATCACAGGACACAGGAGCTTCTCTGCAATCAAACGAACCAGCGCAAGCACCGGCGGCGTCCCCAGCACCGATAATCCTGCCGTACACAGCACAACAACACAGCGCAATGGATAGTAAGGACGAGACGCGGGCACAGTCCCAGCAGGCGGACGAGGGGCTCGAACCGACGACCGCCGCCCTGGACCAGCTCGCCCTGTCGCTGCCGCTCGGGAAGAAGCGGGCGGGCCGGGGCGCGGTAGCGAGCGGGCTGACGCACGAGTGCGGCGTGTTCGGCGCGATTGCGACGGGCGAATGGCCGACGCAGATTGACGTGGCGCAGGTCATCTGTCTCGGGCTGGTGGCGCTGCAGCACCGCGGCCAGGAGTCGGCCGGCATCGTGACGAGCGAGGGCCACTGCGCGAAGAACTTCAACGTGCACAAGGGCATGGGCATGATCAACAACATCTTCACCGACGACTCGATGAAGAAGCTGAAGGGC] consensusID : consensus_8875#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 573 fasta sequence [CGACCCACGCGTCCGAGCATTTCGGAGGAAAAGTGGTGGCATCGATGGCCGGCGCGCGATCGCCGTAGCGTCGCCGCACGGTCAGCAATACCGCCAGCTGCTGGTCGACACCATCGCGACCGCCCTCGTCCTTGTGCACAGCATCGTCTTCGTCGTCGTTGCGCCTGCAGTTAGCAGCATGATCGCCACCGCTACCGTAGTGTTAGTACAGCTTCGAACCAATTCATTGGCTTCGCTACGATCATGATGATACTCTCCGGAGAGACTAGGGCCAGAGGATATATGCGCGCGACTACCATCAGAATACTAGAAACACAGGAAGGAATGTGAAGGCCGGCAAGCAAGCGGCGGTTTAGCGATTCTATTACCAGCAAGCTGTGAATCAAGCATACCTGAACATACTAATTGCACCAGGCAAACAGACATAACAACAACAGCCCAAAAAGACAAAGAATTATGTAAAAGATTTTTAAAAGCCAACCCCGCCGCCGCCGTCACTGCCGCTGCTCCTTGTAGGACCGGAATCCAGGCTTTTGATTTGTGCAAACGCAACATTACTAGCTAAATATGGGC] [+] EMBL BM620579 [CGACCCACGCGTCCGAGCATTTCGGAGGAAAAGTGGTGGCATCGATGGCCGGCGCGCGATCGCCGTAGCGTCGCCGCACGGTCAGCAATACCGCCAGCTGCTGGTCGACACCATCGCGACCGCCCTCGTCCTTGTGCACAGCATCGTCTTCGTCGTCGTTGCGCCTGCAGTTAGCAGCATGATCGCCACCGCTACCGTAGTGTTAGTACAGCTTCGAACCAATTCATTGGCTTCGCTACGATCATGATGATACTCTCCGGAGAGACTAGGGCCAGAGGATATATGCGCGCGACTACCATCAGAATACTAGAAACACAGGAAGGAATGTGAAGGCCGGCAAGCAAGCGGCGGTTTAGCGATTCTATTACCAGCAAGCTGTGAATCAAGCATACCTGAACATACTAATTGCACCAGGCAAACAGACATAACAACAACAGCCCAAAAAGACAAAGAATTATGTAAAAGATTTTTAAAAGCCAACCCCGCCGCCGCCGTCACTGCCGCTGCTCCTTGTAGGACCGGAATCCAGGCTTTTGATTTGTGCAAACGCAACATTACTAGCTAAATATGGGC] consensusID : consensus_8875#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 367 fasta sequence [TACACGTCTCTCTCTCACTCAAACCTAATGCTTACTCCCAGGTCTTAATGACTTCGTTGGCTGTTTCGTCGAACAAGTTTGGTTCGATTTGGCACACAGGTTTCAGGATCACAGGTTAACACACAAACACGCGTGGTGGTGGTGGTCGTCGTTGATGGTAGTCGGTGGTAGTCGTACACAGACGAGGGAGTGCAGAACGTCGAGGTCGGGGTCGGATCGGAAGGTCAACAACAACAGTAAGGTAAGACGAAGAAAAGTAAGGAGGAAGGAACAATCGATACGAGAGACGAGACGAGGGAAGAGAGAAAAAAAGAAGAAGANAAAAATAAAACATTATAGATAAACCGAACATTTGAGANAAATTATA] [+] EMBL BX619261 [TACACGTCTCTCTCTCACTCAAACCTAATGCTTACTCCCAGGTCTTAATGACTTCGTTGGCTGTTTCGTCGAACAAGTTTGGTTCGATTTGGCACACAGGTTTCAGGATCACAGGTTAACACACAAACACGCGTGGTGGTGGTGGTCGTCGTTGATGGTAGTCGGTGGTAGTCGTACACAGACGAGGGAGTGCAGAACGTCGAGGTCGGGGTCGGATCGGAAGGTCAACAACAACAGTAAGGTAAGACGAAGAAAAGTAAGGAGGAAGGAACAATCGATACGAGAGACGAGACGAGGGAAGAGAGAAAAAAAGAAGAAGANAAAAATAAAACATTATAGATAAACCGAACATTTGAGANAAATTATA] consensusID : consensus_8875#6 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 298 fasta sequence [CCGCGGACGCGTGGGCCAGCAGCTGGGAATGAGTGTGTGGGCTCTGAAGAGGGAAAGAGGGGGGGAAATTGGTGGGAACACACACACCCCGCTGTCGAAGGGAGTAAAACCCCCGTGTGTGTACGTTAGAAAAAAGCCGAAGAAGGCGGAATATGTATAGCATGTGCGCGTACGCGAAACAAAACAGAGAAGAGTTACGTTGAATCGCTAAGATGATTATTAAGAAACTAATGGAAAGTTCAATTGCGGTAAAAATATTAAAGAAGAAGGAGAGAGATAGCTCATATAAAATACACAT] [+] EMBL BM599935 [CCGCGGACGCGTGGGCCAGCAGCTGGGAATGAGTGTGTGGGCTCTGAAGAGGGAAAGAGGGGGGGAAATTGGTGGGAACACACACACCCCGCTGTCGAAGGGAGTAAAACCCCCGTGTGTGTACGTTAGAAAAAAGCCGAAGAAGGCGGAATATGTATAGCATGTGCGCGTACGCGAAACAAAACAGAGAAGAGTTACGTTGAATCGCTAAGATGATTATTAAGAAACTAATGGAAAGTTCAATTGCGGTAAAAATATTAAAGAAGAAGGAGAGAGATAGCTCATATAAAATACACAT] consensusID : consensus_8875#7 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 139 fasta sequence [GGAAACAAATGGGCAGCTCACGGCCCAGCCCAGGGGAGAGCAGCTGTAAAATCACACGACCACACAAAACCAAGGCAAGACAAGCAGCGCAGACAGAGGGGAACAAAAATTATACCAACGGGACAGAACAACCTGAGAG] [+] EMBL BX604480 [GGAAACAAATGGGCAGCTCACGGCCCAGCCCAGGGGAGAGCAGCTGTAAAATCACACGACCACACAAAACCAAGGCAAGACAAGCAGCGCAGACAGAGGGGAACAAAAATTATACCAACGGGACAGAACAACCTGAGAG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_8875#0 TTGGCAATAGCGGCATCTTTATGCAAAAAGCGCTCAAAACCTCCTCCAAAAATCTTTAGT 60 consensus_8875#7 ------------------------------------------------------------ consensus_8875#5 ------------------------------------------------------------ consensus_8875#3 ------------------------------------------------------------ consensus_8875#6 ------------------------------------------------------------ consensus_8875#4 ------------------------------------------------------------ consensus_8875#1 ------------------------------------------------------------ consensus_8875#2 ------------------------------------------------------------ consensus_8875#0 CGTTTAGCAACTAGTGCTAATTACTGTACGAAAAAAAGGCTGTTCACCGTTTTGTTTCAT 120 consensus_8875#7 ------------------------------------------------------------ consensus_8875#5 ------------------------------------------------------------ consensus_8875#3 ------------------------------------------------------------ consensus_8875#6 ------------------------------------------------------------ consensus_8875#4 ------------------------------------------------------------ consensus_8875#1 ------------------------------------------------------------ consensus_8875#2 ------------------------------------------------------------ consensus_8875#0 TCTTCGTAAGGTTAACCAGTTTGTGGGTGGAAGATGGCCTGCATATAAGCGCCAGCATTA 180 consensus_8875#7 ------------------------------------------------------------ consensus_8875#5 ------------------------------------------------------------ consensus_8875#3 ------------------------------------------------------------ consensus_8875#6 ------------------------------------------------------------ consensus_8875#4 ------------------------------------------------------------ consensus_8875#1 ------------------------------------------------------------ consensus_8875#2 ------------------------------------------------------------ consensus_8875#0 TTAATTTGTAAGCGCATGAATGAATACGTAGACGATTAAATATAATAATTCTTCTACAGT 240 consensus_8875#7 ------------------------------------------------------------ consensus_8875#5 ------------------------------------------------------------ consensus_8875#3 ------------------------------------------------------------ consensus_8875#6 ------------------------------------------------------------ consensus_8875#4 ------------------------------------------------------------ consensus_8875#1 ------------------------------------------------------------ consensus_8875#2 ------------------------------------------------------------ consensus_8875#0 TGGGGTGGAAGGAGTATATTGCAGGACATTGATATCTGTTAACTACTTTCTCTACTCTAT 300 consensus_8875#7 ------------------------------------------------------------ consensus_8875#5 ------------------------------------------------------------ consensus_8875#3 ------------------------------------------------------------ consensus_8875#6 ------------------------------------------------------------ consensus_8875#4 ------------------------------------------------------------ consensus_8875#1 -----------------------------------------------CCGCCCACGCGTC 13 consensus_8875#2 ------------------------------------------------------------ consensus_8875#0 GTAATCTGTTTTGTTTGTAGCAAATTAGTTTGTTTAAGAGAGTAACACGCGAAGGAATAT 360 consensus_8875#7 ------------------------------------------------------------ consensus_8875#5 ------------------------------------------------------------ consensus_8875#3 ------------------------------------------------------------ consensus_8875#6 ------------------------------------------------------------ consensus_8875#4 ------------------------------------------------------------ consensus_8875#1 CGCGCTAGCCTACGAACATGCAGAGTCCGATATCATGAAACGACCACCCCGTGATCCCTT 73 consensus_8875#2 ------------------------------------------------------------ consensus_8875#0 CCCAGTTTCGGGACAATGAACGAATTTAGCAACGAAAACACATGGGGAATGGAACATTAG 420 consensus_8875#7 ------------------------------------------------------------ consensus_8875#5 ------------------------------------------------------------ consensus_8875#3 ------------------------------------------------------------ consensus_8875#6 ------------------------------------------------------------ consensus_8875#4 ------------------------------------------------------------ consensus_8875#1 CAACGATAAACTTGTCAATGAGAGACTTATCTCGATGGCTTACGGTCAGATCGGTATGAT 133 consensus_8875#2 ------------------------------------------------------------ consensus_8875#0 TTTATACTCGTTTACAATTCTACTCGTTCTCTTCCAATTAGGTAATTTTCAATTAACGCT 480 consensus_8875#7 ------------------------------------------------------------ consensus_8875#5 ------------------------------------------------------------ consensus_8875#3 ------------------------------------------------------------ consensus_8875#6 ------------------------------------------------------------ consensus_8875#4 ------------------------------------------------------------ consensus_8875#1 TCAGGCTGCGGCCGGTTTCTTCGTGTACTTCGTCATCATGGCTGAGAACGGATTCCTGCC 193 consensus_8875#2 ------------------------------------------------------------ consensus_8875#0 AGACAATAATGAGCGATCTTGAAGCTGTATGTTGTTAAATTTCACTCCTATATATGTAAA 540 consensus_8875#7 ------------------------------------------------------------ consensus_8875#5 ------------------------------------------------------------ consensus_8875#3 ------------------------------------------------------------ consensus_8875#6 ------------------------------------------------------------ consensus_8875#4 ------------------------------------------------------------ consensus_8875#1 GCTGAAGCTGTTCGGTCTCCGCAAGAGCTGGGACTCGAAAGCCATCAACGATCTCACCGA 253 consensus_8875#2 ------------------------------------------------------------ consensus_8875#0 GTTTATTTTGTTTCTTGTTTTATTTGCACTTTCCCCTTACCCACTCCCCTTCATAAGCAT 600 consensus_8875#7 ------------------------------------------------------------ consensus_8875#5 ------------------------------------------------------------ consensus_8875#3 ------------------------------------------------------------ consensus_8875#6 ------------------------------------------------------------ consensus_8875#4 ------------------------------------------------------------ consensus_8875#1 CTCGTACGGTCAGGAATGGACCTACCGCGATCGCAAGACCCTCGAGTTCACCTGCCACAC 313 consensus_8875#2 ------------------------------------------------------------ consensus_8875#0 TAGCAGCCAGATCGGTATAAGTAGCCGAACTTAAAGTAAACGTCTTATCCACAATGCTTA 660 consensus_8875#7 ------------------------------------------------------------ consensus_8875#5 ------------------------------------------------------------ consensus_8875#3 ------------------------------------------------------------ consensus_8875#6 ------------------------------------------------------------ consensus_8875#4 ------------------------------------------------------------ consensus_8875#1 CGCGTTCTTCGTGTCGATCGTCGTCGTACAGTGGGCCGATTTGATCATCTGTAAGACTCG 373 consensus_8875#2 ------------------------------------------------------------ consensus_8875#0 GTATCATATTATTCCAATTGCCCTTAGCTACAACACGTGTAGGAGGACACATTTAAAGTA 720 consensus_8875#7 ------------------------------------------------------------ consensus_8875#5 ------------------------------------------------------------ consensus_8875#3 ------------------------------------------------------------ consensus_8875#6 ------------------------------------------------------------ consensus_8875#4 ------------------------------------------------------------ consensus_8875#1 CCGTAACTCGATTTTCCACCAGGGCATGAGAAACTGGGCCCTCAACTTCGGTCTCGTGTT 433 consensus_8875#2 ------------------------------------------------------------ consensus_8875#0 CGTTGCGCAAGCGCATGCGCAATACAGGGTTTTCCAGGGATTCTCATAGTTGTGGGACAC 780 consensus_8875#7 ------------------------------------------------------------ consensus_8875#5 ------------------------------------------------------------ consensus_8875#3 ------------------------------------------------------------ consensus_8875#6 ------------------------------------------------------------ consensus_8875#4 ------------------------------------------------------------ consensus_8875#1 CGAAACGGTACTGGCTGCCATCCTGTCCTACACGCCGGGCATGGACAAGGGTCTGCGCAT 493 consensus_8875#2 ------------------------------------------------------CCGCGG 6 consensus_8875#0 TTCCTTGACTCTTTCTTATGCGAAGTGAACTTCATATGTTGGAAATTGGACTCTATGGCG 840 consensus_8875#7 ------------------------------------------------------------ consensus_8875#5 ------------------------------------------------------------ consensus_8875#3 ------------------------------------------------------------ consensus_8875#6 ------------------------------------------------------------ consensus_8875#4 ------------------------------------------------------------ consensus_8875#1 GTACCCACTGAAATTCGTTTGGTGGCTACCAGCTTTACCGTTCAGCTTGTCCATCTTCGT 553 consensus_8875#2 ACGCGTGGGCGACTTTGGCTTCGACTTTGAGAACAACGACTTTGAAGTGAACGTGCAGCC 66 consensus_8875#0 CCCTTTTTGGACAGGTGCCTTGGAAATTCCAATTGGATGTGTCCAACAAGGGTGCTATAG 900 consensus_8875#7 ------------------------------------------------------------ consensus_8875#5 ------------------------------------------------------------ consensus_8875#3 ------------------------------------------------------------ consensus_8875#6 ------------------------------------------------------------ consensus_8875#4 ------------------------------CGACCCACGCGTCCGAGCATTTCGGAGGAA 30 consensus_8875#1 GTATGACGAAATTCGTCGCTTCTACTTGAGACGCAATCCAGGCGGCTGGCTAGAGCAAGA 613 consensus_8875#2 GCTGGAGCCCAAGAAGGACGTGCTACTCTTCCACATGAGCTCGTGGCCGTACACCGGATA 126 consensus_8875#0 AGTCCAATTCCCATTACATTAAGTTCATTTCATGTAGGAAAGAGTCTATATAGTGTCCCA 960 consensus_8875#7 ------------------------------------------------------------ consensus_8875#5 ------------------------------------------------------------ consensus_8875#3 ------------------CCGCGGTCCGGCTGCAAGCGTGCGCGCCCCAAGCTCCCTCTC 42 consensus_8875#6 ------------------------------------------------------------ consensus_8875#4 AAGTGGTGGCATCGATGGCCGGCGCGCGATCGCCGTAGCGTCGCCGCACGGTCAGCAATA 90 consensus_8875#1 AACGTACTATTAGGTCAACAAATTTATATTTAAAAAGATTAATTAAAACAAAACCAACAA 673 consensus_8875#2 CAAGGACATCGCCGATCTGCGCCCGATGGCCGAGCAGCCGAGCGTGCACATTCTGCACGA 186 consensus_8875#0 CAGCTACGAGAACTCCTGGAAAACCCTGTATCATCAATATCAGCGTTTCACTGTTTC-GT 1019 consensus_8875#7 ------------------------------------------------------------ consensus_8875#5 --TACACGTCTCTCTCTCACTCAAACCTAATGCTTACTCCCAGGTCTTAATGACTTC-GT 57 consensus_8875#3 TTTCCCTCTTTCCACCCTGCCCCCGCTCCTTCCTCCTCTTCTCCCCTCTAGCAGTGT-GC 101 consensus_8875#6 ------------------------------------------------------------ consensus_8875#4 CCGCCAGCTGCTGGTCGACACCATCGCGACCGCCCTCGTCCTTGTGCACAGCATCGT-CT 149 consensus_8875#1 AAACCAACTCCCCCGCCCCCTGCACACACACACACACAAACAAACACACAGACACGT-GC 732 consensus_8875#2 TCGCGCCCAAACCACCAAGTCGTTCGAGCAGTCGTTCGGTCAGTCGCTGACCGGCGTTGC 246 consensus_8875#0 TCCTTTCGTTCGACGACT-----GGCAACAAGTGGGCAATGTAACGTAATGGAACACTAT 1074 consensus_8875#7 ------------------------------------------------------------ consensus_8875#5 TGGCTGTTTCGTCGAACA-----AGTTTGGTTCGATTTGGCACACAGGTTTCAGGATCAC 112 consensus_8875#3 TCCCAGCATCACAGGACACAGGAGCTTCTCTGCAATCAAACGAACCAGCGCAAGCACCGG 161 consensus_8875#6 ---------------------CCGCGGACGCGTGGGCCAGCAGCTGGGAATGAGTGTGTG 39 consensus_8875#4 TCGTCGTCGTTGCGCCTGCAGTTAGCAGCATGATCGCCACCGCTACCGTAGTGTTAGTAC 209 consensus_8875#1 GGCCATCAATGGGCAGCGCGGCTTCCAGGACACGATCACGTACTGCAGCTCGTGCGGCGA 792 consensus_8875#2 TCTGCGCTTCCAGGCCAAGTACGACAAGGACTTCATCGACTACGCCTACCTGATGAAGCA 306 consensus_8875#0 AAATAAACCGAATGTGCGAATGTTTGCCATTATGTAGGTGATGATGGAAT-GATAAAGTA 1133 consensus_8875#7 ------------------------------------------------------------ consensus_8875#5 AGGTTAAC-----ACACAAACACGCGTGGTGGTGGTGGTCGTCGTTGA-T-GGTAGTCGG 165 consensus_8875#3 CGGCGTCCCCAGCACCGATAATCCTGCCGT-ACACAGCACAACAACACAG-CGCAATGGA 219 consensus_8875#6 GGCTCTGAAGAGGGAAAGAGGGGGGGAAATTGGTGGGAACACACACACCC-CGCTGTCGA 98 consensus_8875#4 AGCTTCGAACCAATTCATTGGCTTCGCTACGATCATGATGATACTCTCCG-GAGAGACTA 268 consensus_8875#1 GGAAAAGCC--GGACAAAAAGTGCTCCAAGTGCAAGGAGGTGCAGTACTG-CGACCGGGA 849 consensus_8875#2 CATTGAGCAGCACGACTACTGGTCTGCGCTGGTCTATCCGTTCGCCTCGGAGACCTACCA 366 consensus_8875#0 AAGCTCCTCCCGGTTTCCCTCCGCATACGGTCAGTCCGTTGAGGCTACCAGCTCACCAGC 1193 consensus_8875#7 -------------------------------------------GGAAACAAATGGGCAGC 17 consensus_8875#5 TGGTAGTCGTACACAGACGAGGGAGTGCAGAACGTCGAGGTCGGGGTCGGATCGGAAGGT 225 consensus_8875#3 TAGTAAGGACGAGACGCGGGCACAGTCCCAGCAGGCGGACGAGGGGCTCGAACCGACGAC 279 consensus_8875#6 AGGGAGTAAAACCCCCGTGTGTGTACGTTAGAAAAAAGCCGAAGAAGGCGGAATATGTAT 158 consensus_8875#4 GGGCCAGAGGATATATGCGCGCGACTACCATCAGAATACTAGAAACACAGGAAGGAATGT 328 consensus_8875#1 GTGCCAGCGGTTACACTGGTTCACCCACAAGAAGGTATGCAGCCGACCGTCTGGAGCGGC 909 consensus_8875#2 CTACCATCAGTTTAACCTGTACTACGATGCTCAGCGCACCAGCGTGAA-GAATGTCAAGT 425 consensus_8875#0 ACACATCC-TT-ATCCGATATCAACGTGTTCAGTGTTTTTTGTGTTACTATC-CTATTTA 1250 consensus_8875#7 TCACGGCC-CA-GCCCA-----GGGGAGAGCAGC-TGTAAAATCACACGACC-ACACAAA 68 consensus_8875#5 CAACAACAACA-GTAAGGTAAGACGAAGAAAAGTAAGGAGGAAGGAACAATCGATACGAG 284 consensus_8875#3 CGCCGCCCTGG-ACCAGCTCGCCCTGTCGCTGCCGCTCGGGAAGAAGCGGGCGGGCCGGG 338 consensus_8875#6 AGCATGTGCGC-GTACGCGAAACAAAACAGAGAAGAGTTACGTTGAATCGCTAAGATGAT 217 consensus_8875#4 GAAGGCCGGCAAGCAAGCGGCGGTTTAGCGATTCTATTACCAGCAAGCTGTGAATCAAGC 388 consensus_8875#1 CGGCGAGGCACCGAACGCGGCCGCCGCCAAGGACATCGATTCGACGGAGATTAGCGAGCA 969 consensus_8875#2 TTGTGCTGCAGCACAAGC--AGGCCGACTACGACCAGGACTTCCAGACCGCCGACGTGAA 483 consensus_8875#0 AC---CAA-AGGAAGAGAAGAAAGGCA-AA-GGAAAGGATTAGGAGATGAGCAGAGAGGG 1304 consensus_8875#7 AC---CAA-GGCAAGACAAGCAGCGCA-GACAGAGGGGAACAAAAATTATACCAACGGGA 123 consensus_8875#5 AGA--CGA-GACGAGGGAAGAGAGAAA-AAAAGAAGAAGANAAAAATAAAACATTATAGA 340 consensus_8875#3 GCG--CGGTAGCGAGCGGGCTGACGCACGAGTGCGGCGTGTTCGGCGCGATTGCGACGGG 396 consensus_8875#6 TAT--TAA--GAAACTAATGGAAAGTTCAATTGCGGTAAAAATATTAAAGAAGAAGGAGA 273 consensus_8875#4 ATA--CCTGAACATACTAATTGCACCAGGCAAACAGACATAACAACAACAGCCCAAAAAG 446 consensus_8875#1 GCT--GCAAAAGTTGGTCGCCGGTTGAATGGAGAGGTTGGTGGCGGATTGCGGCGATAGG 1027 consensus_8875#2 ACACCCGAAGAGTCGCCACGGATACTCTGGATTCTACAACGAGTACAACTACGCCCAGCC 543 consensus_8875#0 GGG-AAAAACCATGCGTAGGGGATCTAGCAAGTGTCTACATTAGGCTACAGGCGTGTACG 1363 consensus_8875#7 CAG-AACAACC-TGAGAG------------------------------------------ 139 consensus_8875#5 TAA-ACCGAACATTTGAGANAAATTATA-------------------------------- 367 consensus_8875#3 CGA-ATGGCCGACGCAGATTGACGTGGCGCAGGTCATCTGTCTCGGGCTGGTGGCGCTGC 455 consensus_8875#6 GAG-ATAGCTCATATAAAATACACAT---------------------------------- 298 consensus_8875#4 ACA-AAGAATTATGTAAAA-GATTTTTAAAAGCCAACCCCGCCGCCGCCGTCACTGCCGC 504 consensus_8875#1 GAG-GACACTTGCAAAGAGCACTATTTTATGTATGTCCCAGTGTACTGTATGTGTGTGTG 1086 consensus_8875#2 CTTCGTCTACTACGCCGGAAGCCAGCGCCGACAGGAGCAGTTCATGCGCAACGCTGGTGC 603 consensus_8875#0 TGTTGCGTATCCGTTTCTATTATTCCAGGACAGCAGAGGAAAGACACACATACACTAAAT 1423 consensus_8875#7 ------------------------------------------------------------ consensus_8875#5 ------------------------------------------------------------ consensus_8875#3 AGCACCGCGGCCAGGAGTCGGCCGGCATCGTGACGAGCGAGGGCCACTGCGCGAAGAACT 515 consensus_8875#6 ------------------------------------------------------------ consensus_8875#4 TGCTCCTTGTAGGACCGGAATCCAGGCTTTTGATTTGTGCAAACGCAACATTACTAGCTA 564 consensus_8875#1 TGTGTAATGGCAGGCGAAGACGAAGGTTAGGCAATATTGTACCGTAAGTGAGAAGAAGCT 1146 consensus_8875#2 CGGTATTCGCAACAGCGACGTCAATGTCTACGATTTCGGAATCGTGTTCGAGGGCAAGCA 663 consensus_8875#0 AGACCATTTGGATTT--------------------------------------------- 1438 consensus_8875#7 ------------------------------------------------------------ consensus_8875#5 ------------------------------------------------------------ consensus_8875#3 TCAACGTGCACAAGGGCATGGGCATGATCAACAACATCTTCACCGACGACTCGATGAAGA 575 consensus_8875#6 ------------------------------------------------------------ consensus_8875#4 AATATGGGC--------------------------------------------------- 573 consensus_8875#1 ACAGTGTGTCTCGCACTTTTCGCATTTGGTCTGTGTCAGTAATGTGTAATAAGCTAAA-- 1204 consensus_8875#2 GCAGAAGG---------------------------------------------------- 671 consensus_8875#0 ----------- consensus_8875#7 ----------- consensus_8875#5 ----------- consensus_8875#3 AGCTGAAGGGC 586 consensus_8875#6 ----------- consensus_8875#4 ----------- consensus_8875#1 ----------- consensus_8875#2 ----------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||