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Anopheles gambiae
cluster # 8896 cluster # 8896       Sequences # 12       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8896#0 length = 1084 sequences # 10  
consensus_8896#1 length = 776 sequences # 1  
consensus_8896#2 length = 544 sequences # 1  

consensusID : consensus_8896#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 1084
fasta sequence
                              [AGAATCGCCACGAGGTTAGATGTTGGAGCGGCCGCAACATGCCTGTTTTTTTTTTGTTGTTATGTAAGTTCCATACTCGTTCCAGTACTTTCGCCCACGTGTCCTATCACTTGCAGCTGTTGTTGCCC-TGTA-GCGGTTACTATT-GGGCAGTTGGTA-TTGGTGTAAAAAGGGTTACAACATTGTAAAATGTTAACTCTGCCGGTGCGAT-TGGCTTTATTTGTGGTGTATT-TGGTTAGTGCCACCGGTGGAAGCCATGTA-GTGTCGGTGACACAATTTCAAACTTCATCATGTGCCGACCG-CCAAGCGCCCGGTATAATTTGCGCCAACTGCAACACGGTGGCCG-TTTGCGT-TAAGATAGGCTCGGTGTGGGAACCGTCTCTGGTCGAAGCCTGCAACGCGGACGAGGGCCTGTACTGTAACGAGTTCGAGGGAGGATGCTCTACCAGCATTGGGTCGTGCAATCCGACCGGGGGAGGTGGCTTTGAGTGTAACACGCCCGGCGTGTTTCCGGATCCGTTCAACTGTCGGCAGTACCACATGTGCTTCCTAAACGGCAACAATCCAGTTGCGATTAATATGGATTGTGGAGGGGCGGCCTTTTCACCAGCAAGT-GGGGATTGCTCCCTACCGCTGAACGATACCGTCTGCCTAACGCCACAATTCAACTGCAGCTTCGTGGGACAAATGGCGGCCTGGCCGGGAAATAACAACATCTACTACATCTGTGCAGCGGAAACGGTACAGGGAAATCGTCTACTGCGCCCACGGTTGTACCGCTGCCCGGCCAATCAAATGTTCGTCGAAGGACAGTGTGTGCAGCGTGACTGGTCCAACATGCCA-CCCGGTACGATAGTTCCTTACGAATGCGTGCGCCCGGGGTTGTTTGCTGATCCTGCCCACTGTCGGTACTACTACAGCTGTAACGCGGAGCT-GGTCGCAACGCATCTACAATGCCCAGAAGGAACCTTCTTCAATGAGAATACCCTCTCGTGTGTGTTGGGAGTTTGCTAGTAGGAAATGTTTAGTTGCCGTTTACTTCATGTTGCAATAAACAATAAAGGGCGAATCGAAATGGCTACAAATA]

[+] EMBL BX466482             [AGAATCGCCACGAGGTTAGATGTTGGAGCGGCCGCAACATGCCTGTTTTTTTTTTGTTGTTATGTAAGTTCCATACTCGTTCCAGTACTTTCGCCCACGTGTCCTATCACTTGCAGCTGTTGTTGCCCATGTAGGCGGTTACTATTCGGGCAGTTGGTA TTGGTGTAAAAAGGGTTACAACATTGTAAAATGTTAACTCTGCCGGTGCGATATGGCTTTATTTGTGGTGTATTNTGGTTAGTGCCACCGGTGGAAGCCATGTANGTGTCGGTGACACAATTTCAAACTTCATCATGTGCCGACCGNCAAAGCGCCCGGTATAATTTGCGCCAACTGCAACANGGTGGCCGNTTTGCGTGAAAGATAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CNS08JY6             [                                                                 tAGTTCCATACTCGTTCCAGTACTTTCGCCCACGTGTCCTATCACTTGCTGCTGTTGTTGCCC TGTA GCGGTTACTATT GGGCAGTTGGTA TTGGTGTAAAAAGGGTTACAACATTGTAAAATGTTAACTCTGCCGGTGCGAT TGGCTTTATTTGTGGTGTATT TGGTTAGTGCCACCGGTGGAAGCCATGTA GTGTCGGTGACACAATTTCAAACTTCATCATGTGCCGACCG CCAAGCGCCCGGTATAATTTGCGCCAACTGCAACACGGTGGCCG TTTGCGT TAAGATAGGCTCGGTGTGGGAACCGTCTCTGGTCGAAGCCTGCAACGCGGACGAGGGCCTGTACTGTAACGAGTTCGAGGGAGGATGCTCTACCAGCATTGGGTCGTGCAATCCGACCGGGGGAGGTGGCTTTGAGTGTAACACGCCCGGCGTGTTTCCGGATCCGTTCAACTGTCGGCAGTACCACATGTGCTTCCTAAACGGCAACAATCCAGTGGCGATTAATATGGATTGTGGAGGGGCGGCCTTTTCACCAGCAAGT GGGGATTGCTCCCTAAAACTGAACGATACCGTCTGCCTAACGCCACAATTCAACTGCAGCTTCGTGGGACAAATGGCGGCCTGGCCGGGAAATAACAACATCTACTACATCTGTGCAGCGGAAACGGTACAGGGAAATCGTCTACTGCGCCCACGGTTGTACCGCTGCCCGGCCAATCAAATGTTCGTCGAAGGACAGTGTGTGCAGCGTGACTGGTCCAACATGCCA CCCGGTACGATAGTTCCTTACGAATGCGTGCGCCCGGGGTTGTTTGCTGATCCTGCCCACTGTCGGTACTACTCCCGCTGTc                                                                                                                                                                   ]
[+] EMBL CNS08IHD             [                                                                        ATACTCGTTCCAGTACTTTCGCCCACGTGTCCTATCACTTGCTGCTGTTGTTGCCC TGTA GCGGTTACTATT GGGCAGTTGGTA TTGGTGTAAAAAGGGTTACAACATTGTAAAATGTTAACTCTGCCGGTGCGAT TGGCTTTATTTGTGGTGTATT TGGTTAGTGCCACCGGTGGAAGCCATGTA GTGTCGGTGACACAATTTCAAACTTCATCATGTGCCGACCA CCAAGCGCCCGGTATAATTTGCGCCAACTGCAACACGGTGGCCG TTTGCGT TAAGATAGGCTCGGTGTGGGAACCGTCTCTGGTCGAAGCCTGCAACGCGGACGAGGGCCTGTACTGTAACGAGTTCGAGGGAGGATGCTCTACCAGCATTGGGTCGTGCAATCCGACCGGGGGAGGTGGCTTTGAGTGTAACACGCCCGGCGTGTTTCCGGATCCGTTCAACTGTCGGCAGTACCACATGTGCTTCCTAAACGGTTTTTTTCCAGTGGCGATTAATATGGATTGTGGAGGGGCGGCCTTTTCACCAGCAAGT GGGGATTGCTCCCTACCGCTGAACGATACCGTCTGCCTAACGCCACAATTCAACTGCAGCTTCGTGGGACAAATGGCGGCCTGGCCGGGAAATAACAACATCTACTACATCTGTGCAGCGGAAACGGTACAGGGAAATCGTCTACTGCGCCCACGGTTGTACCGCTGCCCGGCCAATCAAATGTTCGTCGAAGGACAGTTTGTGCAGCGTGACTGGTCCAACATGCCA CCCGGTACGATAGTTCCTTACGAATGCGTGCGCCCGGGGTCGTTTGCTGATCCTGCCCACTGTCGGTACTACTACAGCTGTAACGCGGA CTGGGTCGCAACGCATCTACAATGCCCAGAAGGAACCTTCTTCAATGAGAATACCCTCTCGTGTGTTTTGGGAGTTTGCTAGTAGGAAATGTTTAGTTGCCGTTTACTTCATGT                                         ]
[+] EMBL BM588301             [                                                                                             CCGACGTGTCCTATCACTTGCAGCTGTTGTTGCCC TGTA GCGGTTACTATT GGGCAGTTGGTATTTTGTGTAAAAAGGGTTAAAACATTGTAAAATGTTAACTCTGCCGGTGCGAT TGGCTTTATTTGTGGTGTATT TGGTTAGTGCCACCGGTGGAAGCCATGTA GTGTCGGTGACACAATTTCAAACTTCATCATGTGCCGACCG CCAAGCGCCCGGTATAATTTGCGCCAACTGCAACACGGTGGCCG TTTGCGT TAAGATAGGCTCGGTGTGGGAACCGTCTCTGGTCGAAGCCTGCAACGCGGACGAGGGCCTGTACTGTAACGAGTTCGAGGGAGGATGCTCTACCAGCATTGGGTCGTGCAATCCGACCGGGGGAGGTGGCTTTGAGTGTAATACGCCCGGCGTGTTTCCGGATCCGTTCAACTGTCGGCAGTACCACATGTGCTTCCTAAACGGCAACAATCCAGTTGCGATTAATATGGACTGTGGAGGGGCGGCCTTTTCACCAGCAAGT GGGGATTGCTCCCTACCGCTGAACGATACCGTCTGCCTAACGCCACAATTCAACTGCAGCTTCGTGGGACAAATGGCGGCCTGGCCGGGAAATAACAACATCTACTACATCTGTGCAGCGGAAACGGTACAGGGAAATCGTCTACTGCGCCCACGGTT                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL BX626599             [                                                                                                                                               ATT GGGCAGTTGGTA TTGGTGTAAAAAGGGTTACAACATTGTAAAATGTTAACTCTGCCGGTGCGAT TGGCTTTATTTGTGGTGTATT TGGTTAGTGCCACCGGTGGAAGCCATGTA GTGTCGGTGACACAATTTCAAACTTCATCATGTGCCGACCG CCAAGCGCCCGGTATAATTTGCGCCAACTGCAACACGGTGGCCG TTTGCGT TAAGATAGGCTCGGTGTGGGAAGCATCTTTGGTCGAAGCCTGCAACGCGGACGAGGGCCTGTACTGTAACGAGTTCGAGGGAGGATGCTCTACCAGCATTGGGTCGTGTAATCCGACCGGGGGAGGTGGCTTTGAGTGTAACACGCCCGGCGTGTTTCCGGATCCGTTCAACTGTCGGCAGTACCACATGTGCTTCCTAAACGGCAACAATCCAGTTGCGATTAATATGGACTGTGGAGGGGCGGCCTTTTCACCAGCAAGT GGGGATTGCTCCCTACCGCTGAACGATACCGTCTGCCTAACGCCACAATTCAACTGCAGCTTCGTGGGACAAATGGCGGCCTGGCCGGGAAATAACAACATCTACTACATCTGTGCAGCGGAAACGGTACAGGGAAATCGTCTACTGCGCCCACGGTTGTACCGCTGCCCGGCCAATCAAATGTTCGTCGAAAGACAGTGTGTGCAGCGTGACTGGTCCAACATGNCACCCCGGTACGATAGTTCCTTACGAAT                                                                                                                                                                                                                            ]
[+] EMBL BX627115             [                                                                                                                                                   tgttgccctGTA TTGGTGTAAAAAGGGTTACAACATTGTAAAATGTTAACTCTGCCGGTGCGAT TGGCTTTATTTGTGGTGTATT TGGTTAGTGCCACCGGTGGAAGCCATGTA GTGTCGGTGACACAATTTCAAACTTCATCATGTGCCGACCG CCAAGCGCCCGGTATAATTTGCGCCAACTGCAACACGGTGGCCG TTTGCGT TAAGATAGGCTCGGTGTGGGAACCGTCTCTGGTCGAAGCCTGCAACGCGGACGAGGGCCTGTACTGTAACGAGTTCGAGGGAGGATGCTCTACCAGCATTGGGTCGTGCAATCCGACCGGGGGAGGTGGCTTTGAGTGTAACACGCCCGGCGTGTTTCCGGATCCGTTCAACTGTCGGCAGTACCACATGTGCTTCCTAAACGGCAACAATCCAGTTGCGATTAATATGGACTGTGGAGGGGCGGCCTTTTCACCAGCAAGT GGGGATTGCTCCCTACCGCTGAACGATACTGTCTGCCTAACGCCACAATTCAACTGCAGCTTCGTGGGACAAATGGCGGCCTGGCCGGGAAATAACAACATCTACTACATCTGTGCAGCGGAAACGGTACAAGGAAATCGTCTACTGCGCCCACGGNTGTACCGCTGCCCGGNCAATCAAATGTTCGTCGAANGACAATGTGTGCAGCGTGACTGGTCCAACATGCCA CCCGGTACGATAGTTCCTTACGAAT                                                                                                                                                                                                                            ]
[-] EMBL CNS08IHE             [                                                                                                                                                                TTGGTGTAAAAAGGGTAACAAAATTGTAAAATGTTAAATCTGCCGGTGCAAT TGGCTTTATTTGTGGTGTATT TGGTTAGTGCCACCGGTGGAAGCCATGTA GTGTCGGTAAAAAAATTTCAAACTTCATCATGTGCCGACCA CCAAGCGCCCGGTATAATTTGCGCCAACTGCAACACGGTGGCCG TTTGCGT TAAAATAGGCTCGGTGTGGGAACCGTCTCTGGTCGAAGCCTGCAACGCGGACGAGGGCCTGTACTGTAACGAGTTCGAGGGAGGATGCTCTACCAGCATTGGGTCGTGCAATCCGACCGGGGGAGGTGGCTTTGAGTGTTACACGCCCGGCGTGTTTCCGGATCCGTTCAACTGTCGGCAGTACCACATGTGCTTCCTAAACAAAAAAAAAAAAAAAACGATTAATATGGATTGTGGAGGGGCGGCCTTTTCACCAGCAAGTCGGGGATTGCTCCCTACCGCTGAACGATACCGTCTGCCTAACGCCACAATTCAACTGCAGCTTCGTGGGACAAATGGCGGCCTGGCCGGGAAATAACAACATCTACTACATTTGTGCAGCGGAAACGGTACAGGGAAATCGTCTACTGCGCCCACGGTTGTACCGCTGCCCGGCCAATCAAATGTTCGTCGAAGGACAGTGTGTGCAGCGTTACTGGTCCAACATGCCA CCCGGTACGATAGTTCCTTACGAATGCGTGCGCCCGGGGTCGTTTGCTGATCCTGCCCACTGTCGGTACTACTACAGCTGTAACGCGGAGCT GGTCGCAACGCATCTACAATGCCCAGAAGGAACCTTCTTCAATGAGAATACCCTCTCGTGTGTGTTGGGAGTTTGCTAGTAGGAAATGTTTAGTTGCCGTTTACTTCATGTTGCAATAAAC                               ]
[-] EMBL CNS08JY7             [                                                                                                                                                                                                                                                                                                                                                GCAACACGGTGGCCG TTTGCGT TAAGATAGGCTCGGTGTGGGAACCGTCTCTGGTCGAAGCCTGCAACGCGGACGAGGGCCTGTACTGTAACGAGTTCGAGGGAGGATGCTCTACCAGCATTGGGTCGTGCAAACCGACCGGGGGAGGTGGCTTTGAGTTTTACACGCCCGGCGTGTTTCCGGATCCGTTCAACTGTCGGCAGTACCACATGTGCTTCCTAAACGGCAACAATCCAGTGGCGATTAATATGGATTGTGGAGGGGCGGCCTTTTCACCAGCAAGT GGGGATTGCTCCCTACCGCTGAACGATACCGTCTGCCTAACGCCACAATTCAACTGCAGCTTCGTGGGACAAATGGCGGCCTGGCCGGGAAATAACAACATCTACTACATCTGTGCAGCGGAAACGGTACAGGGAAATCGTCTACTGCGCCCACGGTTGTACCGCTGCCCGGCCAATCAAATGTTCGTCGAAGGACAGTGTGTGCAGCGTGACTGGTCCAACATGCCA CCCGGTACGATAGTTCCTTACGAATGCGTGCGCCCGGGGTTGTTTGCTGATCCTGCCCACTGTCGGTACTACTACAGCTGTAACGCGGAGCT GGTCGCAACGCATCTACAATGCCCAGAAGGAACCTTCTTCAATGAGAATACCCTCTCGTGTGTGTTGGGAGTTTGCTAGTAGGAAATGTTTAGTTGCCGTTTACTTCATGTTGCAATAAAAAATAAAGG                       ]
[-] EMBL BX625562             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                      AGCATTGGGTCGTGCAATCCGACCGGGGGAGGTGGCTTTGAGTGTAACACGCCCGGCGTGTTTCCGGATCCGTTCAACTGTCGGCAGTACCACATGTGCTTCCTAAACGGCAACAATCCAGTTGCGATTAATATGGACTGTGGAGGGGCGGCCTTTTCACCAGCAAGT GGGGATTGCTCCCTACCGCTGAACGATACTGTCTGCCTAACGCCACAATTCAACTGCAGCTTCGTGGGACAAATGGCGGCCTGGCCGGGAAATAACAACATCTACTACATCTGTGCAGCGGAAACGGTACAAGGAAATCGTNTACTGCGCCCACGGTTGTACCGCTGCCCGGCCAATCAAATGTTCGTCGAAGGACAATGTGTGCAGCGTGACTGGTCCAACATGCCA CCCGGTACGATAGTTCCTTACGAATGCGTGCGTCCGGGGTTGTTTGCTGATCCTGCCCACTGTCGGTACTACTACAGCTGTAACGCGGAGCT GGTCGCAACGCATCTACAATGCCCAGAAGGAACCTTCTTCAATGAGAATACCCTCTCGTGTGTGTTGGGAGTTTGCTAGTAGGAAATGTTTAGTTGCCGTTTACTTCATGTTGCAATAAACAATCACTTGCGAATCGAAATGGCTACAAATA]
[-] EMBL CNS08ZRF             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GATACCTTCTGCCTAACGCCACAATTCAACTGCAGCTTCGTGGGACAAATGGCGGCCTGGCCGGGAAATAACAACATCTACTACATTTGTGCAGCGGAAACGGTACAGGGAAATCGTCTACTGCGCCCACGGTTGTACCGCTGCCCGGCCAATCAAATGTTCGTCGAAGGACAGTGTGTGCAGCGTTACTGGTCCAACATGCCA CCCGGTACGATAGTTCCTTACGAATGCGTACGCCCTGGGTTGTTTGCTGATCCTGCCCACTGTCGGTACTACTACAGCTGTAACGCGGAGCT GGTCGCAACGCATCTACAATGCCCAGAAGGAACCTTCTTCAATGAGAATACCCTCTCGTGTGTGTTGGGAGTTTGCTAGTAGGAAATGTTTAGTTGCCGTTTAC                                                ]


>consensus_8896#0 AGAATCGCCACGAGGTTAGATGTTGGAGCGGCCGCAACATGCCTGTTTTTTTTTTGTTGT TATGTAAGTTCCATACTCGTTCCAGTACTTTCGCCCACGTGTCCTATCACTTGCAGCTGT TGTTGCCCTGTAGCGGTTACTATTGGGCAGTTGGTATTGGTGTAAAAAGGGTTACAACAT TGTAAAATGTTAACTCTGCCGGTGCGATTGGCTTTATTTGTGGTGTATTTGGTTAGTGCC ACCGGTGGAAGCCATGTAGTGTCGGTGACACAATTTCAAACTTCATCATGTGCCGACCGC CAAGCGCCCGGTATAATTTGCGCCAACTGCAACACGGTGGCCGTTTGCGTTAAGATAGGC TCGGTGTGGGAACCGTCTCTGGTCGAAGCCTGCAACGCGGACGAGGGCCTGTACTGTAAC GAGTTCGAGGGAGGATGCTCTACCAGCATTGGGTCGTGCAATCCGACCGGGGGAGGTGGC TTTGAGTGTAACACGCCCGGCGTGTTTCCGGATCCGTTCAACTGTCGGCAGTACCACATG TGCTTCCTAAACGGCAACAATCCAGTTGCGATTAATATGGATTGTGGAGGGGCGGCCTTT TCACCAGCAAGTGGGGATTGCTCCCTACCGCTGAACGATACCGTCTGCCTAACGCCACAA TTCAACTGCAGCTTCGTGGGACAAATGGCGGCCTGGCCGGGAAATAACAACATCTACTAC ATCTGTGCAGCGGAAACGGTACAGGGAAATCGTCTACTGCGCCCACGGTTGTACCGCTGC CCGGCCAATCAAATGTTCGTCGAAGGACAGTGTGTGCAGCGTGACTGGTCCAACATGCCA CCCGGTACGATAGTTCCTTACGAATGCGTGCGCCCGGGGTTGTTTGCTGATCCTGCCCAC TGTCGGTACTACTACAGCTGTAACGCGGAGCTGGTCGCAACGCATCTACAATGCCCAGAA GGAACCTTCTTCAATGAGAATACCCTCTCGTGTGTGTTGGGAGTTTGCTAGTAGGAAATG TTTAGTTGCCGTTTACTTCATGTTGCAATAAACAATAAAGGGCGAATCGAAATGGCTACA AATA



consensusID : consensus_8896#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 776
fasta sequence
                              [CGTGTCCTATCACTTGCAGCTGTTGTTGCCCTGTAGCGGTTACTATTGGGCAGTTGGTATTGGTGTAAAAAGGGTTACAACATTGTAAAATGTTAACTCTGCCGGTGCGATTGGCTTTATTTGTGGTGTATTTGGTTAGTGCCACCGGTGGAAGCCATGTACCGACCGCCAAGCGCCCGGTATAATTTGCGCCAACTGCAACACGGTGGCCGTTTGCGTTAAGATAGGCTCGGTGTGGGAACCGTCTCTGGTCGAAGCCTGCAACGCGGACGAGGGCCTGTACTGTAACGAGTTCGAGGGAGGATGCTCTACCAGCATTGGGTCGTGCAATCCGACCGGGGGAGGTGGCTTTGAGTGTAACACGCCCGGCGTGTTTCCGGATCCGTTCAACTGTCGGCAGTACCACATGTGCTTCCTAAACGGCAACAATCCAGTTGCGATTAATATGGACTGTGGAGGGGCGGCCTTTTCACCAGCAAGTGGGGATTGCTCCCTACCGCTGAACGATACCGTCTGCCTAACGCCACAATTCAACTGCAGCTTCGTGGGACAAATGGCGGCCTGGCCGGGAAATAACAACATCTACTACATCTGTGCAGCGGAAACGGTACAGGGAAATCGTCTACTGCGCCCACGGTTGTACCGCTGCCCGGCCAATCAAATGTTCGTCGAAGGACAGTGTGTGCAGCGTGACTGGTCCAACATGCCACCCGGTACGATAGTTCCTTACGAATGCGTACGCCCTGGGTTGTTTGCTGATCCTGCCCACTGTCGGT]

[+] EMBL CNS08ZRE             [CGTGTCCTATCACTTGCAGCTGTTGTTGCCCTGTAGCGGTTACTATTGGGCAGTTGGTATTGGTGTAAAAAGGGTTACAACATTGTAAAATGTTAACTCTGCCGGTGCGATTGGCTTTATTTGTGGTGTATTTGGTTAGTGCCACCGGTGGAAGCCATGTACCGACCGCCAAGCGCCCGGTATAATTTGCGCCAACTGCAACACGGTGGCCGTTTGCGTTAAGATAGGCTCGGTGTGGGAACCGTCTCTGGTCGAAGCCTGCAACGCGGACGAGGGCCTGTACTGTAACGAGTTCGAGGGAGGATGCTCTACCAGCATTGGGTCGTGCAATCCGACCGGGGGAGGTGGCTTTGAGTGTAACACGCCCGGCGTGTTTCCGGATCCGTTCAACTGTCGGCAGTACCACATGTGCTTCCTAAACGGCAACAATCCAGTTGCGATTAATATGGACTGTGGAGGGGCGGCCTTTTCACCAGCAAGTGGGGATTGCTCCCTACCGCTGAACGATACCGTCTGCCTAACGCCACAATTCAACTGCAGCTTCGTGGGACAAATGGCGGCCTGGCCGGGAAATAACAACATCTACTACATCTGTGCAGCGGAAACGGTACAGGGAAATCGTCTACTGCGCCCACGGTTGTACCGCTGCCCGGCCAATCAAATGTTCGTCGAAGGACAGTGTGTGCAGCGTGACTGGTCCAACATGCCACCCGGTACGATAGTTCCTTACGAATGCGTACGCCCTGGGTTGTTTGCTGATCCTGCCCACTGTCGGT]


>consensus_8896#1 CGTGTCCTATCACTTGCAGCTGTTGTTGCCCTGTAGCGGTTACTATTGGGCAGTTGGTAT TGGTGTAAAAAGGGTTACAACATTGTAAAATGTTAACTCTGCCGGTGCGATTGGCTTTAT TTGTGGTGTATTTGGTTAGTGCCACCGGTGGAAGCCATGTACCGACCGCCAAGCGCCCGG TATAATTTGCGCCAACTGCAACACGGTGGCCGTTTGCGTTAAGATAGGCTCGGTGTGGGA ACCGTCTCTGGTCGAAGCCTGCAACGCGGACGAGGGCCTGTACTGTAACGAGTTCGAGGG AGGATGCTCTACCAGCATTGGGTCGTGCAATCCGACCGGGGGAGGTGGCTTTGAGTGTAA CACGCCCGGCGTGTTTCCGGATCCGTTCAACTGTCGGCAGTACCACATGTGCTTCCTAAA CGGCAACAATCCAGTTGCGATTAATATGGACTGTGGAGGGGCGGCCTTTTCACCAGCAAG TGGGGATTGCTCCCTACCGCTGAACGATACCGTCTGCCTAACGCCACAATTCAACTGCAG CTTCGTGGGACAAATGGCGGCCTGGCCGGGAAATAACAACATCTACTACATCTGTGCAGC GGAAACGGTACAGGGAAATCGTCTACTGCGCCCACGGTTGTACCGCTGCCCGGCCAATCA AATGTTCGTCGAAGGACAGTGTGTGCAGCGTGACTGGTCCAACATGCCACCCGGTACGAT AGTTCCTTACGAATGCGTACGCCCTGGGTTGTTTGCTGATCCTGCCCACTGTCGGT



consensusID : consensus_8896#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 544
fasta sequence
                              [TCGCCCGAGTTTNTTAGTATTTGGTTAGTGCCACCGGTGGAAGCCATGTAGTGTCGGTGACACAATTTCAAACTTCATCATGTGCCGACCGCCAAGCGCCCGGTATAATTTGCGCCAACTGCAACACGGTGGCCGTTTGCGTTAAGATAGGCTCGGTGTGGGAAGCATCTTTGGTCGAAGCCTGCAACGCGGACGAGGGCCTGTACTGTAACGAGTTTGAGGGAGGATGCTCTACCAGCATTGGGTCGTGTAATCCGACCGGGGGAGGTGGCTTTGAGTGTAACACGCCCGGCGTGTTTCCGGATCCGTTCAACTGTCGGCAGTACCACATGTGCTTCCTAAACGGCAACAATCCAGTTGCGATTAATATGGACTGTGGAGGGGCGGCCTTTTCACCAGCAAGTGGGGATTGCTCCCTACCGCTGAACGATACCGTCTGCCTAACGCCACAATTCAACTGCAGCTTCGTGGGACAAACTGGCGGCCTGGCCGGGAACATAACAACATCTACTACATCTGTGCAGCGNGAAACGGTACAGGCAAA]

[+] EMBL AL934774             [TCGCCCGAGTTTNTTAGTATTTGGTTAGTGCCACCGGTGGAAGCCATGTAGTGTCGGTGACACAATTTCAAACTTCATCATGTGCCGACCGCCAAGCGCCCGGTATAATTTGCGCCAACTGCAACACGGTGGCCGTTTGCGTTAAGATAGGCTCGGTGTGGGAAGCATCTTTGGTCGAAGCCTGCAACGCGGACGAGGGCCTGTACTGTAACGAGTTTGAGGGAGGATGCTCTACCAGCATTGGGTCGTGTAATCCGACCGGGGGAGGTGGCTTTGAGTGTAACACGCCCGGCGTGTTTCCGGATCCGTTCAACTGTCGGCAGTACCACATGTGCTTCCTAAACGGCAACAATCCAGTTGCGATTAATATGGACTGTGGAGGGGCGGCCTTTTCACCAGCAAGTGGGGATTGCTCCCTACCGCTGAACGATACCGTCTGCCTAACGCCACAATTCAACTGCAGCTTCGTGGGACAAACTGGCGGCCTGGCCGGGAACATAACAACATCTACTACATCTGTGCAGCGNGAAACGGTACAGGCAAA]


>consensus_8896#2 TCGCCCGAGTTTNTTAGTATTTGGTTAGTGCCACCGGTGGAAGCCATGTAGTGTCGGTGA CACAATTTCAAACTTCATCATGTGCCGACCGCCAAGCGCCCGGTATAATTTGCGCCAACT GCAACACGGTGGCCGTTTGCGTTAAGATAGGCTCGGTGTGGGAAGCATCTTTGGTCGAAG CCTGCAACGCGGACGAGGGCCTGTACTGTAACGAGTTTGAGGGAGGATGCTCTACCAGCA TTGGGTCGTGTAATCCGACCGGGGGAGGTGGCTTTGAGTGTAACACGCCCGGCGTGTTTC CGGATCCGTTCAACTGTCGGCAGTACCACATGTGCTTCCTAAACGGCAACAATCCAGTTG CGATTAATATGGACTGTGGAGGGGCGGCCTTTTCACCAGCAAGTGGGGATTGCTCCCTAC CGCTGAACGATACCGTCTGCCTAACGCCACAATTCAACTGCAGCTTCGTGGGACAAACTG GCGGCCTGGCCGGGAACATAACAACATCTACTACATCTGTGCAGCGNGAAACGGTACAGG CAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8896#0      AGAATCGCCACGAGGTTAGATGTTGGAGCGGCCGCAACATGCCTGTTTTTTTTTTGTTGT 60
consensus_8896#1      ------------------------------------------------------------
consensus_8896#2      ------------------------------------------------------------
                                                                                  

consensus_8896#0      TATGTAAGTTCCATACTCGTTCCAGTACTTTCGCCCACGTGTCCTATCACTTGCAGCTGT 120
consensus_8896#1      -------------------------------------CGTGTCCTATCACTTGCAGCTGT 23
consensus_8896#2      ------------------------------------------------------------
                                                                                  

consensus_8896#0      TGTTGCCCTGTAGCGGTTACTATTGGGCAGTTGGTATTGGTGTAAAAAGGGTTACAACAT 180
consensus_8896#1      TGTTGCCCTGTAGCGGTTACTATTGGGCAGTTGGTATTGGTGTAAAAAGGGTTACAACAT 83
consensus_8896#2      ------------------------------------------------------------
                                                                                  

consensus_8896#0      TGTAAAATGTTAACTCTGCCGGTGCGATTGGCTTTATTTGTGGTGTATTTGGTTAGTGCC 240
consensus_8896#1      TGTAAAATGTTAACTCTGCCGGTGCGATTGGCTTTATTTGTGGTGTATTTGGTTAGTGCC 143
consensus_8896#2      ---------------------------TCGCCCGAGTTTNTTA-GTATTTGGTTAGTGCC 32
                                                 * * *    *** *   ****************

consensus_8896#0      ACCGGTGGAAGCCATGTAGTGTCGGTGACACAATTTCAAACTTCATCATGTGCCGACCGC 300
consensus_8896#1      ACCGGTGGAAGCCATGTA----------------------------------CCGACCGC 169
consensus_8896#2      ACCGGTGGAAGCCATGTAGTGTCGGTGACACAATTTCAAACTTCATCATGTGCCGACCGC 92
                      ******************                                  ********

consensus_8896#0      CAAGCGCCCGGTATAATTTGCGCCAACTGCAACACGGTGGCCGTTTGCGTTAAGATAGGC 360
consensus_8896#1      CAAGCGCCCGGTATAATTTGCGCCAACTGCAACACGGTGGCCGTTTGCGTTAAGATAGGC 229
consensus_8896#2      CAAGCGCCCGGTATAATTTGCGCCAACTGCAACACGGTGGCCGTTTGCGTTAAGATAGGC 152
                      ************************************************************

consensus_8896#0      TCGGTGTGGGAACCGTCTCTGGTCGAAGCCTGCAACGCGGACGAGGGCCTGTACTGTAAC 420
consensus_8896#1      TCGGTGTGGGAACCGTCTCTGGTCGAAGCCTGCAACGCGGACGAGGGCCTGTACTGTAAC 289
consensus_8896#2      TCGGTGTGGGAAGCATCTTTGGTCGAAGCCTGCAACGCGGACGAGGGCCTGTACTGTAAC 212
                      ************ * *** *****************************************

consensus_8896#0      GAGTTCGAGGGAGGATGCTCTACCAGCATTGGGTCGTGCAATCCGACCGGGGGAGGTGGC 480
consensus_8896#1      GAGTTCGAGGGAGGATGCTCTACCAGCATTGGGTCGTGCAATCCGACCGGGGGAGGTGGC 349
consensus_8896#2      GAGTTTGAGGGAGGATGCTCTACCAGCATTGGGTCGTGTAATCCGACCGGGGGAGGTGGC 272
                      ***** ******************************** *********************

consensus_8896#0      TTTGAGTGTAACACGCCCGGCGTGTTTCCGGATCCGTTCAACTGTCGGCAGTACCACATG 540
consensus_8896#1      TTTGAGTGTAACACGCCCGGCGTGTTTCCGGATCCGTTCAACTGTCGGCAGTACCACATG 409
consensus_8896#2      TTTGAGTGTAACACGCCCGGCGTGTTTCCGGATCCGTTCAACTGTCGGCAGTACCACATG 332
                      ************************************************************

consensus_8896#0      TGCTTCCTAAACGGCAACAATCCAGTTGCGATTAATATGGATTGTGGAGGGGCGGCCTTT 600
consensus_8896#1      TGCTTCCTAAACGGCAACAATCCAGTTGCGATTAATATGGACTGTGGAGGGGCGGCCTTT 469
consensus_8896#2      TGCTTCCTAAACGGCAACAATCCAGTTGCGATTAATATGGACTGTGGAGGGGCGGCCTTT 392
                      ***************************************** ******************

consensus_8896#0      TCACCAGCAAGTGGGGATTGCTCCCTACCGCTGAACGATACCGTCTGCCTAACGCCACAA 660
consensus_8896#1      TCACCAGCAAGTGGGGATTGCTCCCTACCGCTGAACGATACCGTCTGCCTAACGCCACAA 529
consensus_8896#2      TCACCAGCAAGTGGGGATTGCTCCCTACCGCTGAACGATACCGTCTGCCTAACGCCACAA 452
                      ************************************************************

consensus_8896#0      TTCAACTGCAGCTTCGTGGGACAAA-TGGCGGCCTGGCCGGGAA-ATAACAACATCTACT 718
consensus_8896#1      TTCAACTGCAGCTTCGTGGGACAAA-TGGCGGCCTGGCCGGGAA-ATAACAACATCTACT 587
consensus_8896#2      TTCAACTGCAGCTTCGTGGGACAAACTGGCGGCCTGGCCGGGAACATAACAACATCTACT 512
                      ************************* ****************** ***************

consensus_8896#0      ACATCTGTGCAGCGG-AAACGGTACAGGGAAATCGTCTACTGCGCCCACGGTTGTACCGC 777
consensus_8896#1      ACATCTGTGCAGCGG-AAACGGTACAGGGAAATCGTCTACTGCGCCCACGGTTGTACCGC 646
consensus_8896#2      ACATCTGTGCAGCGNGAAACGGTACAGGCAAA---------------------------- 544
                      **************  ************ ***                            

consensus_8896#0      TGCCCGGCCAATCAAATGTTCGTCGAAGGACAGTGTGTGCAGCGTGACTGGTCCAACATG 837
consensus_8896#1      TGCCCGGCCAATCAAATGTTCGTCGAAGGACAGTGTGTGCAGCGTGACTGGTCCAACATG 706
consensus_8896#2      ------------------------------------------------------------
                                                                                  

consensus_8896#0      CCACCCGGTACGATAGTTCCTTACGAATGCGTGCGCCCGGGGTTGTTTGCTGATCCTGCC 897
consensus_8896#1      CCACCCGGTACGATAGTTCCTTACGAATGCGTACGCCCTGGGTTGTTTGCTGATCCTGCC 766
consensus_8896#2      ------------------------------------------------------------
                                                                                  

consensus_8896#0      CACTGTCGGTACTACTACAGCTGTAACGCGGAGCTGGTCGCAACGCATCTACAATGCCCA 957
consensus_8896#1      CACTGTCGGT-------------------------------------------------- 776
consensus_8896#2      ------------------------------------------------------------
                                                                                  

consensus_8896#0      GAAGGAACCTTCTTCAATGAGAATACCCTCTCGTGTGTGTTGGGAGTTTGCTAGTAGGAA 1017
consensus_8896#1      ------------------------------------------------------------
consensus_8896#2      ------------------------------------------------------------
                                                                                  

consensus_8896#0      ATGTTTAGTTGCCGTTTACTTCATGTTGCAATAAACAATAAAGGGCGAATCGAAATGGCT 1077
consensus_8896#1      ------------------------------------------------------------
consensus_8896#2      ------------------------------------------------------------
                                                                                  

consensus_8896#0      ACAAATA 1084
consensus_8896#1      -------
consensus_8896#2      -------
                             




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)