These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8903#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1260 fasta sequence [CCGGGCAAGAGAACGACACGTTGATCGTGCTAAAGTGTGGTATTGGTGAACTGTTTGTGTACAATTCACAGTTTTAGTTCAAAACATCTGTTTTTTTTATTGTGTTGCAACACAACACAAAGCAGGTGTGCGTGTTGTGTGTGTGTATGTTGTTAAGTGCGTTAGTACGAAGTGATATGATTACAGTGCAACGTGGCTGCCGTCCACTGCTCGGACCAACGGAAACGTACGCCAGCTTTGTGCCGTATCGGGCCATCGCGGCCATCACAGTGCAATTGTAAATGAGCACACAGCAACCACCACGTCGATGACATTTCCAGCTACGATTGACATTTTTCAACGTGATTAAAAGCCTTCCTGCCCCTTCCACCCGGGCCCTTAATTGTCCTCCAGTGCGACCTGCTATCGCGGTGGCTCTCGCGCAAGCACACGATAAGATACGCGAATACGGTACGCAGGCCGTACGCTT-GGGGAAGGTTGTTGCTGTTTGTTTGTCTGTCCGGTGTGGTTGG-TTAGTGATTTTGTTC-GCAAACTTAAAAATAACCTGTCAGCGAACGGTAAAGTTCTATTCCACAAAGAGCAGTGACGAAGGGCTTTTGGAAGGGCCTAGCAAAGGGACCTGGAAGACTGCAGCTTGATCAAGTGACGGACAGAATCAGAGGACAGACAGCGTCGCCCAGCGGCGATACCCAGACGATATTAGTGGAGTTAATAGTGCCACACAGCTATGACGATCACTGGTACGAGTAATGGTGGT------GGCGGC------GGCGGTGGAATGCGGCCTCTGAAGGTAACGACGGTCGGCGACGGTATGGTCGGGAAGACCTGCATGCTCATCACCTACACGCAGAACGAGTTCCCGAGCGAGTACGTCCCGACCGTGTTCGACAATCACGCGTGCAACATTGTGGTGGACGGGGCCGATTACGCGCTAACGCTGTGGGACACGGCCGGCCAGGAAGATTACGAACGGTTGCGACCGCTCAGCTATCCCAACACCGACTGTTTCCTCATCTGCTACTCCATATCGAACCGCACATCTTTCGATAACGTGCTGTCCAAGTGGTACCCGGAGATAAGACATTTTGCACCCTCCGTACCGATCGTGCTTGTCGGCACCAAGAGCGATCTGCGTGTGCCCGGGTCGGAGAAGTTTGTCACCACGGCCGAGGGCAAGAAGCTGAAGCACAAAATCAAAGCCTACGCGCTGGTGGAATGTTCCGCGAAGCGGAAGCTCAACCTTGCCGAGGTGTTTGACGAGGC] [+] EMBL BM643559 [CCGGGCAAGAGAACGACACGTTGATCGTGCTAAAGTGTGGTATTGGTGAACTGTTTGTGTACAATTCACAGTTTTAGTTCAAAACATCTGTTTTTTTTATTGTGTTGCAACACAACACAAAGCAGGTGTGCGTGTTGTGTGTGTGTATGTTGTTAAGTGCGTTAGTACGAAGTGATATGATTACAGTGCAACGTGGCTGCCGTCCACTGCTCGGACCAACGGAAACGTACGCCAGCTTTGTGCCGTATCGGGCCATCGCGGCCATCACAGTGCAATTGTAAATGAGCACACAGCAACCACCACGTCGATGACATTTCCAGCTACGATTGACATTTTTCAACGTGATTAAAAGCCTTCCTGCCCCTTCCACCCGGGCCCCTAATTGTCCTCCAGTGCGACCTGCTATCGCGGTGGCTCTCGCGCAAGCACACGATAAGATACGCGAATACGGTACGCAGGCCGTACGCTT GGGGAAGGTTTTTGCTGTTTGTTTGTCTGTCCGGTGTGGTTGG TTAGTGATTTTGTTCTGC AACTTTAAAATAACCTGCCAGCGAACGATAAAGCTCTATCCCACACAGAGCAGTGACG ] [+] EMBL BM651643 [ ccgGAGAACGACACGTCGATCGTGCTAAAGTGTGGTGTTGGTGAACTGTTTGTGTACAATTCATAGTTTTAGTTCAAAACATCTG TTTTTTTATTGTGTTGCAACACAACACAAAGCAGGTGTGCGTGTTGTGTGTGTG TGTTGTTAAGTGCGTTAGTACGAAGTGATATGATTACAGTGCAACGTGGCTGCCGTCCACTGCTCGGACCAACGGAAACGTACGCCAGCTTTGTGCCGTATCGGGCCATCGCGGCCATCACAGTGCAATTGTAAATGAGCACACAGCAACCACCACGTCGATGACATTTCCAGTTACGATTGACATTTTTCAACGTGATTAAAAGCCTTCCTGCCCCTTCCACCCGGGCCCTTAATTGTCCTCCAGTGCGACCTGCTATCGCGGTGGCTCTCGCGCAAGCACACGATAAGATACGCGAATACGGTACGCAGGCCGTACGCTTGGGGGAAGGTTGTTGCTGTTTGTTTGTCTGTCCGGTGTGGTTGGTTTAGTGATTTTGTTC GCAAACTTAAAAATAACCTGTCAGCGAACGGTAAAGTTCTATTCCACAAAGAGCAGTGACGAAGGGCTTTTGGAAGGGCCTAGCAAAGGGAC ] [+] EMBL BM585129 [ CCGCTTCCACCCGGGCCCTTAATTGTCCTCCAGTGCGACCTGCTATCGCGGTGGCTCTCGCGCAAGCACACGATAAGATACGCGAATACGGTACGCAGGCCGTACGCTT GGGGAAGGTTGTTGCTGTTTGTTTGTCTGTCCGGTGTGGTTGG TTAGTGATTTTGTTC GCAAACTTAAAAATAACCTGTCAGCGAACGGTAAAGTTCTATTCCACAAAGAGCAGTGACGAAGGGCTTTTGGAAGGGCCTAGCAAAGGGACCTGGAAGACTGCAGCTTGATCAAGTGACGGACAGAATCAGAGGACAGACAGCGTCGCCCAGCGGCGATACCCAGACGATATTAGTGGAGTTAATAGTGCCACACAGCTATGACGATCACTGGTACGAGTAATGGTAGT GGCGGC GGCGGTGGAATGCGGCCCCTGAAGGTAACGACGGTCGGCGACGGTATGGTCGGGAAGACCTGCATGCTCATCACCTACACGCAGAACGAGTTCCCGAGCGAGTACGTCCCGACCGTGTTCGACAATCACGCGTGCAACATTGTGGTGGACGGGGCCGATTACGCGCTAACGCTGTGGGACACGGCCGGCCAGGAAGATTACGAACGGTTGCGACCGCTCAGCTATCCCAACACCGACTGg ] [+] EMBL BX602584 [ ATCAGAGAACAGACAGCGTCGCCCTGCGGCGATACCCAGACGACATTAGTGGAGTTAATAGTGCCACACAGCTATGACGATCACTGGTACGAGTAATGGTGGT GGCGGCGGCGGTGGCGGTGGAATGCGGCCTCTGAAGGTAACGACGGTCGGCGACGGTATGGTCGGGAAGACCTGCATGCTCATCACCTACACGCAGAACGAGTTCCCGAGCGAGTACGTCCCGACCGTGTTCGACAATCACGCGTGCAACATTGTGGTGGACGGGGCCGATTACGCGCTAACGCTGTGGGACACGGCCGGCCAGGAAGATTACGAACGGTTGCGACCGCTCAGCTATCCCAACACCGACTGTTTCCTCATCTGCTACTCCATATCGAACCGCACATCTTTCGATAACGTGCTGTCCAAGTGGT ] [+] EMBL BM643709 [ ccgACTGGTACGAGTAATGGTGGTGGCGGCGGCGGC GGCGGTGGAATGCGGCCTCTGAAGGTAACGACGGTCGGCGACGGTATGGTCGGGAAGACCTGCATGCTCATCACCTACACGCAGAACGAGTTCCCGAGCGAGTACGTCCCGACCGTGTTCGACAATCACGCGTGCAACATTGTGGTGGACGGGGCCGATTACGCGCTAACGCTGTGGGACACGGCCGGCCAGGAAGATTACGAACGGTTGCGACCGCTCAGCTATCCCAACACCGACTGTTTCCTCATCTGCTACTCCATATCGAACCGCACATCTTTCGATAACGTGCTGTCCAAGTGGTACCCGGAGATAAGACATTTTGCACCCTCCGTACCGATCGTGCTTGTCGGCACCAAGAGCGATCTGCGTGTGCCCGGGTCGGAGAAGTTTGTCACCACGGCCGAGGGCAAGAAGCTGAAGCACAAAATCAAAGCCTACGCGCTGGTGGAATGTTCCGCGAAGCGGAAGCTCAACCTTGCCGAGGTGTTTGACGAGGC] consensusID : consensus_8903#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1080 fasta sequence [CAGAATCGCCNGAGGTNAACGCTCAGCTATCCAACACCGACTGTTTCCTCATCTGCTACTCCATATCGAACCGCACATCTTTCGATAACGTGCTGTCCAAGTGGTACCCGGAGATAAGACATTTTGCACCCTCCGTACCGATCGTGCTTGTCGGACCAAGAGCGATCTGCGTGTGCCCGGGTCGGAGAAGGTTTGTCACCACGGCCGAAGGGCAAAGAAGCTGAAGCACCAAAAATCAAAGCCCTACGCGCTGGTGGAAATGTTCCGGCGGAAAGGCGGAAGCTCAAACCTTGCCGAGGGTGTTGGACGAGGCGGTGCGCGCTGTCGAGAAGAAACCACACGCCGGACCGCGGATGTGTACGATACTATAGCTTTGGCGTGGAGAAAAGCTGCAAAACGCTTCAGCGGAAAACCAGTCTACTCTAGGCACGACACAGCCCAGGGGATGACGGGGGAAGGTCTTTTTAGAGGTTGTACGATTGATGGATTGTGTAAACCTGGTACTCACGATGCGCACTACTACTACTACTACTACTACTACGAGGGGGACTCGTTCGAACTTTAGACGACTATTTAGGGCTAATTAAATTGTAACTGTGCCG-CACACGGGAAATTCCTGCAACAGTATTGGAATGTAGTAAATTTTAGTACGAAATTTTTGTGGGGCTGATGTATTGTGGTGATGAGATTCTAATCAACGGTTCAAGGATGCAGACCGGTTTGCCATAAACACACGATCGAAAGTATCGAAATGAGGAGAAATTCGCAACGCAAAAGTTAGATGTGCTGTTAGATAGATTACTTCCCTTTCTACACTGTCCAAAAAGTGTGACCAAAAGAAGACTTCCCTGATAATGCAGTCAATAGCGATGTTCTAACTGGAGAGGTGAAGATTGATAAACACCTGAAGCGATAGTGGGCTGGGGCTACTAAAGAAGGGGCATGTTGGCGCGTAGATAGCACAGGAACAAGAATTGTTAAAAGAGTATTTATAGTGATAGAGAAGGCGAAGGAAAGATTGGTACGCGTGTTGAAAGCGGAAATGGAAAACTGAAAGGGTGTAAGCAAACGACGGTAGGG] [+] EMBL AL696916 [CAGAATCGCCNGAGGTNAACGCTCAGCTATCCAACACCGACTGTTTCCTCATCTGCTACTCCATATCGAACCGCACATCTTTCGATAACGTGCTGTCCAAGTGGTACCCGGAGATAAGACATTTTGCACCCTCCGTACCGATCGTGCTTGTCGGACCAAGAGCGATCTGCGTGTGCCCGGGTCGGAGAAGGTTTGTCACCACGGCCGAAGGGCAAAGAAGCTGAAGCACCAAAAATCAAAGCCCTACGCGCTGGTGGAAATGTTCCGGCGGAAAGGCGGAAGCTCAAACCTTGCCGAGGGTGTTGGACGAGGCGGTGCGCGCTGTCGAGAAGAAACCACACGCCGGACCGCGGATGTGTACGATACTATAGCTTTGGCGTGGAGAAAAGCTGCAAAACGCTTCAGCGGAAAACCAGTCTACTCTAGGCACGACACAGCCCAGGGGATGACGGGGGAAGGTCTTTTTAGAGGTTGTACGATTGATGGATTGTGTAAACCTGGTACTCACGATGCGCACTACTACTACTACTACTACTACTACGAGGGGGACTCGTTCGAACTTTAGACGACTATTTAGGGCTAATTAAATTGTAACTGTGCCG CACACGGGAAATTCCTGCAACAGTATTGGAATGTAGTAAATTTTAGTA ] [+] EMBL BM642362 [ ccggcgcACTACTACTACTACGAGGGGGACTCGTTCGAACTTTAGACGAATATTTAGGGCTAATTAAATTGTAGCTGTGCCGCCACACGGGAAATTCCTGCAACAGTATTGGAATGTAGTAAATTTTAGTACGAAATTTTTGTGGGGCTGATGTATTGTGGTGATGAGATTCTAATCAACGGTTCAAGGATGCAGACCGGTTTGCCATAAACACACGATCGAAAGTATCGAAATGAGGAGAAATTCGCAACGCAAAAGTTAGATGTGCTGTTAGATAGATTACTTCCCTTTCTACACTGTCCAAAAAGTGTGACCAAAAGAAGACTTCCCTGATAATGCAGTCAATAGCGATGTTCTAACTGGAGAGGTGAAGATTGATAAACACCTGAAGCGATAGTGGGCTGGGGCTACTAAAGAAGGGGCATGTTGGCGCGTAGATAGCACAGGAACAAGAATTGTTAAAAGAGTATTTATAGTGATAGAGAAGGCGAAGGAAAGATTGGTACGCGTGTTGAAAGCGGAAATGGAAAACTGAAAGGGTGTAAGCAAACGACGGTAGGG] consensusID : consensus_8903#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 644 fasta sequence [CCGCGACACGTTGATCGTGCTAAAGTGTGTGTGCGTGTTGTGTGTGTGTATGTTGTTAAGTGCGTTAGTACGAAGTGATATGATTACAGTGCAACGTGGCTGCCGTCCACTGCTCGGACCAACGGAAACGTACGCCAGCTTTGTGCCGTATCGGGCCATCGCGGCCATCACAGTGCAATTGTAAATGAGCACACAGCAACCACCACGTCGATGACATTTCCAGCTACGATTGACATTTTTCAACGTGATTAAAAGCCTTCCTGCCCCTTCCACCCGGGCCCCTAATTGTCCTCCAGTGCGACCTGCTATCGCGGTGGCTCTCGCGCAAGCACACGATAAGATACGCGAATACGGTACGCAGGCCGTACGCTTGGGGAAGGTTTTTGCTGTTTGTTTGTCTGTCCGGTGTGGTTGGTTAGTGATTTTGTTCTGCAACTTTAAAATAACCTGCCAGCGAACGATAAAGCTCTATCCCACACAGAGCAGTGACGAAGGGCTTTTGGAAGGGCCTAAAAGGAAAGCGAAAGGGACCTGGAAGACTGCAGCTTGAAGCAGAGACGGGCAGAATCAGAGGACAGACAGCGTCGCCCAGCGGCGATACCCAGACGATATTAGTGGAGTTAATAGTGCCACACAGCTATGAC] [+] EMBL BM639846 [CCGCGACACGTTGATCGTGCTAAAGTGTGTGTGCGTGTTGTGTGTGTGTATGTTGTTAAGTGCGTTAGTACGAAGTGATATGATTACAGTGCAACGTGGCTGCCGTCCACTGCTCGGACCAACGGAAACGTACGCCAGCTTTGTGCCGTATCGGGCCATCGCGGCCATCACAGTGCAATTGTAAATGAGCACACAGCAACCACCACGTCGATGACATTTCCAGCTACGATTGACATTTTTCAACGTGATTAAAAGCCTTCCTGCCCCTTCCACCCGGGCCCCTAATTGTCCTCCAGTGCGACCTGCTATCGCGGTGGCTCTCGCGCAAGCACACGATAAGATACGCGAATACGGTACGCAGGCCGTACGCTTGGGGAAGGTTTTTGCTGTTTGTTTGTCTGTCCGGTGTGGTTGGTTAGTGATTTTGTTCTGCAACTTTAAAATAACCTGCCAGCGAACGATAAAGCTCTATCCCACACAGAGCAGTGACGAAGGGCTTTTGGAAGGGCCTAAAAGGAAAGCGAAAGGGACCTGGAAGACTGCAGCTTGAAGCAGAGACGGGCAGAATCAGAGGACAGACAGCGTCGCCCAGCGGCGATACCCAGACGATATTAGTGGAGTTAATAGTGCCACACAGCTATGAC] consensusID : consensus_8903#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 567 fasta sequence [CCGTTCAAAACAACGCCGTAGTTCGTTGTTCGAGTGCGACGCATTATATGCCCGCGTGTCACAGTTTCGTTCATAACGAGTTCCAAACAACGGGGACAGAGTGGGAAAAGAAGGAAAAAACACCCTAAAAAACAAAAAATAAACGATACCATAGTGAGCCAAAGCGGTTTGGTGAGGCTTTGCCGTGTATTCGTGTGGACGACGACAACCTGTTGGCGCTGTTGGGGTTTTGTTTGTTGTCATCTTCGCAGCGCAAACCCCCCACCCGTGATGATCGTTGCGTGATCGTGATCTCTACACACAAATACACGCGAGATACGAGACGGCGGAAAAAAAGGGAAACCACCCTATCACGGGAATAGTGTGTTGAAGTTAATTTCCGAGCAGGTTATCGGTGTGTGGATTCGATCGCTGCAATATGGGTGTGCGTGTTGTGTGTGTGTATGTTGTTAAGTGCGTTAGTACGAAGTGATATGATTACAGTGCAACGTGGCTGCCGTCCACTGCTCGGACCAACGGAAACGTACGCCAGCTTTGTGCCGTATCGGGCCATCGCGGCCATCACAG] [+] EMBL BM642947 [CCGTTCAAAACAACGCCGTAGTTCGTTGTTCGAGTGCGACGCATTATATGCCCGCGTGTCACAGTTTCGTTCATAACGAGTTCCAAACAACGGGGACAGAGTGGGAAAAGAAGGAAAAAACACCCTAAAAAACAAAAAATAAACGATACCATAGTGAGCCAAAGCGGTTTGGTGAGGCTTTGCCGTGTATTCGTGTGGACGACGACAACCTGTTGGCGCTGTTGGGGTTTTGTTTGTTGTCATCTTCGCAGCGCAAACCCCCCACCCGTGATGATCGTTGCGTGATCGTGATCTCTACACACAAATACACGCGAGATACGAGACGGCGGAAAAAAAGGGAAACCACCCTATCACGGGAATAGTGTGTTGAAGTTAATTTCCGAGCAGGTTATCGGTGTGTGGATTCGATCGCTGCAATATGGGTGTGCGTGTTGTGTGTGTGTATGTTGTTAAGTGCGTTAGTACGAAGTGATATGATTACAGTGCAACGTGGCTGCCGTCCACTGCTCGGACCAACGGAAACGTACGCCAGCTTTGTGCCGTATCGGGCCATCGCGGCCATCACAG] consensusID : consensus_8903#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 560 fasta sequence [CCCCCGAGGTTACATTGTGGTGGACGGGGCCCGATTACGCGCTAACGCTGTGGGACACGGCCGGCCAGGAAGATTACGAACGGTTGCGACCGCTCAGCTATCCCAACACCGACTGTTTCCTCATCTGCTACTCCATATCGAACCGCACATCTTTCGATAACGTGCTGTCCAAGTGGTACCCGGAGATAAGGCATTTTGCACCCTCCGTACCGATCGTGCTTGTCGGCACCAAGAGCGATCTGCGTGTGCCCTGGTCGGAGAAGTTTGTCACCACGGCCGAGGGCAAGAAGCTGAAGCACAAAATCAAAGCCTACGCGCTGGTGGAATGTTCCGCGAAGCGGAAGCTCAACCTTGCCGAGGTGTTTGACGAGGCGGTGCGCGCTGTCGAGAAGAAACCACACGCCGGACTGCGGATGTTGTACGATACTATAGCTTTGGCGTGTAGAAAAGCTGCAAACGCTTCAGCGGAAAACAGTCTACTCTAGGCACGGCACAACCCAGGTCGGACTGACGGGGGAAGGTCTTTTTCAAAGGTTGTAGACTTGATGGATTGTGTAAAC] [+] EMBL AL692970 [CCCCCGAGGTTACATTGTGGTGGACGGGGCCCGATTACGCGCTAACGCTGTGGGACACGGCCGGCCAGGAAGATTACGAACGGTTGCGACCGCTCAGCTATCCCAACACCGACTGTTTCCTCATCTGCTACTCCATATCGAACCGCACATCTTTCGATAACGTGCTGTCCAAGTGGTACCCGGAGATAAGGCATTTTGCACCCTCCGTACCGATCGTGCTTGTCGGCACCAAGAGCGATCTGCGTGTGCCCTGGTCGGAGAAGTTTGTCACCACGGCCGAGGGCAAGAAGCTGAAGCACAAAATCAAAGCCTACGCGCTGGTGGAATGTTCCGCGAAGCGGAAGCTCAACCTTGCCGAGGTGTTTGACGAGGCGGTGCGCGCTGTCGAGAAGAAACCACACGCCGGACTGCGGATGTTGTACGATACTATAGCTTTGGCGTGTAGAAAAGCTGCAAACGCTTCAGCGGAAAACAGTCTACTCTAGGCACGGCACAACCCAGGTCGGACTGACGGGGGAAGGTCTTTTTCAAAGGTTGTAGACTTGATGGATTGTGTAAAC] consensusID : consensus_8903#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 503 fasta sequence [GCGGCGTGCGTGCATAGTAATAAACCCTTTTCCCGAGTGTTTCTGGTGTCTCTTGTGCAAAGTGGCGAGAATTTACAAAGTGTGTACAAACACAAGCGAACGAAGTGGAAACAATAAAACAGTACAAAACATCCCATCAATCAGTCCAGTCAAGAGTCATCCCCAGGAGCTCAAGACTGGACGCATTGGACGCGGTGAACCAAAGCTGAAGGGGTTGGTAGTGGCGTGCGTGTTGTGTGTGTGTGCTGTTAAGTGCGTTAGGACGAAGTGATATGATTACAGTGCAACGTGGCTGCCGTCCACTGCTCGGACCAACGGAAACGTACGCCAGCTTTGTGCCGTATCGGGCCATCGCGGCCATCACAGTGCAATTGTAAATGAGCACACAGCAACCACCACGTCGATGACATTTCCAGTTACGATTGACATTTTTCAACGTGATTAAAAGCCTTCCTGCCCCTTCCACCCGGGCCCTTAATTGTCCTCCAGTGCGACCTGCTATC] [+] EMBL BM655632 [GCGGCGTGCGTGCATAGTAATAAACCCTTTTCCCGAGTGTTTCTGGTGTCTCTTGTGCAAAGTGGCGAGAATTTACAAAGTGTGTACAAACACAAGCGAACGAAGTGGAAACAATAAAACAGTACAAAACATCCCATCAATCAGTCCAGTCAAGAGTCATCCCCAGGAGCTCAAGACTGGACGCATTGGACGCGGTGAACCAAAGCTGAAGGGGTTGGTAGTGGCGTGCGTGTTGTGTGTGTGTGCTGTTAAGTGCGTTAGGACGAAGTGATATGATTACAGTGCAACGTGGCTGCCGTCCACTGCTCGGACCAACGGAAACGTACGCCAGCTTTGTGCCGTATCGGGCCATCGCGGCCATCACAGTGCAATTGTAAATGAGCACACAGCAACCACCACGTCGATGACATTTCCAGTTACGATTGACATTTTTCAACGTGATTAAAAGCCTTCCTGCCCCTTCCACCCGGGCCCTTAATTGTCCTCCAGTGCGACCTGCTATC] consensusID : consensus_8903#6 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 387 fasta sequence [CCGGATCGTGCTAAAGTGTGGTATTGGTGAACTGTTTGTGTACAATTCACAGTTTTAGTTCAAAACATCTGTTTTTTTTATTGTGTTGCAACACAACACAAAGCAGGGTAAAAATAAATGTGCGTGTTGTGTGTGTGTATGTTGTTAAGTGCGTTAGTACGAAGTGATATGATTACAGTGCAACGTGGCTGCCGTCCACTGCTCGGACCAACGGAAACGTACGCCAGCTTTGTGCCGTATCGGGCCATCGCGGCCATCACAGTGCAATTGTAAATGAGCACACAGCAACCACCACGTCGATGACATTTCCAGCTACGATTGACATTTTTCAACGTGATTAAAAGCCTTCCTGCCCCTTCCACCCGGGGCCCCTAATTGTCCTCCAGT] [+] EMBL BM580109 [CCGGATCGTGCTAAAGTGTGGTATTGGTGAACTGTTTGTGTACAATTCACAGTTTTAGTTCAAAACATCTGTTTTTTTTATTGTGTTGCAACACAACACAAAGCAGGGTAAAAATAAATGTGCGTGTTGTGTGTGTGTATGTTGTTAAGTGCGTTAGTACGAAGTGATATGATTACAGTGCAACGTGGCTGCCGTCCACTGCTCGGACCAACGGAAACGTACGCCAGCTTTGTGCCGTATCGGGCCATCGCGGCCATCACAGTGCAATTGTAAATGAGCACACAGCAACCACCACGTCGATGACATTTCCAGCTACGATTGACATTTTTCAACGTGATTAAAAGCCTTCCTGCCCCTTCCACCCGGGGCCCCTAATTGTCCTCCAGT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_8903#0 ------------------------------------------------------------ consensus_8903#2 ------------------------------------------------------------ consensus_8903#6 ------------------------------------------------------------ consensus_8903#5 ------------------------------------------------------------ consensus_8903#3 ------------------------------------------------------------ consensus_8903#1 ------------------------------------------------------------ consensus_8903#4 CCCCCGAGGTTACATTGTGGTGGACGGGGCCCGATTACGCGCTAACGCTGTGGGACACGG 60 consensus_8903#0 ------------------------------------------------------------ consensus_8903#2 ------------------------------------------------------------ consensus_8903#6 ------------------------------------------------------------ consensus_8903#5 ----------GCGGCGTGCGTGCATAGTAATAAACCCTTTTCCCGAGTGTTTCTGGTGTC 50 consensus_8903#3 ------------------------CCGTTCAAAACAACGCCGTAGTTCGTTGTTCGAGTG 36 consensus_8903#1 --------CAGAATCGCCNGAGGTN---AACGCTCAGCTATCC-AACACCGACTGTTTCC 48 consensus_8903#4 CCGGCCAGGAAGATTACGAACGGTTGCGACCGCTCAGCTATCCCAACACCGACTGTTTCC 120 consensus_8903#0 -----------------------------------------CCGGGCAAGAGAACGACAC 19 consensus_8903#2 ------------------------------------------------------------ consensus_8903#6 ------------------------------------------------------------ consensus_8903#5 TCTTGTGCAAAGTGGCGAGAATTTACAAAGT-GTGTACAAACACAAGCGAACGAAGTGGA 109 consensus_8903#3 CGACGCATTATATGCCCGCGTGTCACAGTTTCGTTCATAACGAGTTCCAAACAACGGGGA 96 consensus_8903#1 TCATCTGCTACTCCATATCGAACCGCACATCTTTCGATAACGTGCTGTCCAAGTGGTACC 108 consensus_8903#4 TCATCTGCTACTCCATATCGAACCGCACATCTTTCGATAACGTGCTGTCCAAGTGGTACC 180 consensus_8903#0 GTTGATCGTGCTAAAGTGTGGTATTG--GTGAACTGTTTGTGTACAATTCACAGTTTTAG 77 consensus_8903#2 ------------------------------------------------------------ consensus_8903#6 CCGGATCGTGCTAAAGTGTGGTATTG--GTGAACTGTTTGTGTACAATTCACAGTTTTAG 58 consensus_8903#5 AACAATAAAACAGTACAAAACATCCC--ATCAATCAGTCCAGTCAAGAGTCATCCCCAGG 167 consensus_8903#3 CAGAGTGGGAAAAGAAGGAAAAAACA--CCCTAAAAAACAAAAAATAAACGATACCATAG 154 consensus_8903#1 CGGAGATAAGACATTTTGCACCCTCCGTACCGATCGTGCTTGTCGG-ACCAAGAGCGATC 167 consensus_8903#4 CGGAGATAAGGCATTTTGCACCCTCCGTACCGATCGTGCTTGTCGGCACCAAGAGCGATC 240 consensus_8903#0 TTCAAAACATCTGTTTTTTTTATTGTGTTGCAACACAACACAAAGCAGG----------- 126 consensus_8903#2 -----------------CCGCGACACGTTG-ATCGTGCTA--AAGTGTG----------- 29 consensus_8903#6 TTCAAAACATCTGTTTTTTTTATTGTGTTGCAACACAACACAAAGCAGGGTAAAAATAAA 118 consensus_8903#5 AGCTCAAGACTGGACGCATTGGACGCGGTGAACCAAAGCTGAAGGGGTTG---GTAGTGG 224 consensus_8903#3 TGAGCCAAAGCGGTTTGGT--GAGGCTTTGCCGTGTATTCGTGTGGACGACGACAACCTG 212 consensus_8903#1 TGCGTGTGCCCGGGTCGGA-GAAGGTTTGTCACCACGGCCGAAGGGCAAAGAAGCTGAAG 226 consensus_8903#4 TGCGTGTGCCCTGGTCGGA-GAAG-TTTGTCACCACGGCCGAGGGC--AAGAAGCTGAAG 296 * consensus_8903#0 TGTGCG-TGTTGTGTGTGTGTATGTTGTTAAGTGCGTT----------AGTACGAAGT-- 173 consensus_8903#2 TGTGCG-TGTTGTGTGTGTGTATGTTGTTAAGTGCGTT----------AGTACGAAGT-- 76 consensus_8903#6 TGTGCG-TGTTGTGTGTGTGTATGTTGTTAAGTGCGTT----------AGTACGAAGT-- 165 consensus_8903#5 CGTGCG-TGTTGTGTGTGTGT--GCTGTTAAGTGCGTT----------AGGACGAAGT-- 269 consensus_8903#3 TTGGCGCTGTTGGGGTTTTGTTTGTTGTCATCTTCGC-----------AGCGCAAACCCC 261 consensus_8903#1 CACCAAAAATCAAAGCCCTACGCGCTGGTGGAAATGTTCCGGCGGAAAGGCGGAAGCTCA 286 consensus_8903#4 CAC--AAAATCAAAGCC-TACGCGCTGGTGGAA-TGTTCC----GCGAAGCGGAAGCTCA 348 * * * ** * * * consensus_8903#0 ------GATATGATTACAGTGCAA-CGTGGCTGCCGTCCACTGCTCGGACCAACGGAAAC 226 consensus_8903#2 ------GATATGATTACAGTGCAA-CGTGGCTGCCGTCCACTGCTCGGACCAACGGAAAC 129 consensus_8903#6 ------GATATGATTACAGTGCAA-CGTGGCTGCCGTCCACTGCTCGGACCAACGGAAAC 218 consensus_8903#5 ------GATATGATTACAGTGCAA-CGTGGCTGCCGTCCACTGCTCGGACCAACGGAAAC 322 consensus_8903#3 CCACCCGTGATGATCGTTGCGTGATCGTGATCTCTACACACAAATACACGCGAGATACGA 321 consensus_8903#1 AACCTTGCCGAGGGTGTTGGACGA-GGCGGTGCGCGCTGTCGAGAAGAAACCACACGCCG 345 consensus_8903#4 A-CCTTGCCGAGG-TGTTTGACGA-GGCGGTGCGCGCTGTCGAGAAGAAACCACACGCCG 405 * * * * * * * * consensus_8903#0 GTACGCCAGCTTTGTGCCGTATCG-GGCCATCGCGGCCATCACAGTGCAATTGTAAATGA 285 consensus_8903#2 GTACGCCAGCTTTGTGCCGTATCG-GGCCATCGCGGCCATCACAGTGCAATTGTAAATGA 188 consensus_8903#6 GTACGCCAGCTTTGTGCCGTATCG-GGCCATCGCGGCCATCACAGTGCAATTGTAAATGA 277 consensus_8903#5 GTACGCCAGCTTTGTGCCGTATCG-GGCCATCGCGGCCATCACAGTGCAATTGTAAATGA 381 consensus_8903#3 GACGGCGGAAAAAAAGGGAAACCA-CCCTATCACGGGAAT-AGTGTGTTGAAGTTAATTT 379 consensus_8903#1 GACCGCGGATGT-GTACGATACTATAGCTTTGGCGTGGAGAAAAGCTGCAAAACGCTTCA 404 consensus_8903#4 GACTGCGGATGTTGTACGATACTATAGCTTTGGCGTGTAGAAAAGCTGCAAA-CGCTTCA 464 * ** * * * ** * * * * consensus_8903#0 GCACACAG-CAACCACCACGTCGAT--GACATT-TCCAGCTACGATTGACATTTTTCAAC 341 consensus_8903#2 GCACACAG-CAACCACCACGTCGAT--GACATT-TCCAGCTACGATTGACATTTTTCAAC 244 consensus_8903#6 GCACACAG-CAACCACCACGTCGAT--GACATT-TCCAGCTACGATTGACATTTTTCAAC 333 consensus_8903#5 GCACACAG-CAACCACCACGTCGAT--GACATT-TCCAGTTACGATTGACATTTTTCAAC 437 consensus_8903#3 CCGAGCAGGTTATCGGTGTGTGGATTCGATCGC-TGCAATATGGGTGTGCGTGTT---GT 435 consensus_8903#1 GCGGAAAACCAGTCTACTC-TAGGCACGACACAGCCCAGG---GGATGACGGGGGAAGGT 460 consensus_8903#4 GCGGAAAAC-AGTCTACTC-TAGGCACGGCACAACCCAGGTCGGACTGACGGGGGAAGGT 522 * * * * * * ** * * consensus_8903#0 GTGATTAAAAGCCTTCCTGCCCCTTCCACCCGGG-CCCTTAATTGTCCTCCAGTGCGACC 400 consensus_8903#2 GTGATTAAAAGCCTTCCTGCCCCTTCCACCCGGG-CCCCTAATTGTCCTCCAGTGCGACC 303 consensus_8903#6 GTGATTAAAAGCCTTCCTGCCCCTTCCACCCGGGGCCCCTAATTGTCCTCCAGT------ 387 consensus_8903#5 GTGATTAAAAGCCTTCCTGCCCCTTCCACCCGGG-CCCTTAATTGTCCTCCAGTGCGACC 496 consensus_8903#3 GTGTGTGTATGTTGTTAAGTGCGTTAGTACGAAGTGATATGATTACAGTGCAACGTGGCT 495 consensus_8903#1 CTTTTT-AGAGGTTGTACGATTGATGGATTGTGTAAACCTGGTA--CTCACGATGCGCAC 517 consensus_8903#4 CTTTTTCAAAGGTTGTAGACTTGATGGATTGTGTAAAC---------------------- 560 * * * * consensus_8903#0 TGCTATCGCGG-TGGCTCTCGCGCAAGCACACGATAAGATACGCGAATACGGTACGCAGG 459 consensus_8903#2 TGCTATCGCGG-TGGCTCTCGCGCAAGCACACGATAAGATACGCGAATACGGTACGCAGG 362 consensus_8903#6 ------------------------------------------------------------ consensus_8903#5 TGCTATC----------------------------------------------------- 503 consensus_8903#3 GCCGTCCACTGCTCGGACCAACGGAAACGTACGCCAGCTTTGTGCCGTATCGGGCCATCG 555 consensus_8903#1 TACTACTACTACTACTACTACTACGAGGGGGACTCGTTCGAACTTTAGACGACTATTTAG 577 consensus_8903#4 ------------------------------------------------------------ consensus_8903#0 CCGTACGCTTGGGGAAGGTTGTTGCTGTTTGTTTGTCTGTCCGGTGTGGTTGGTTAGTGA 519 consensus_8903#2 CCGTACGCTTGGGGAAGGTTTTTGCTGTTTGTTTGTCTGTCCGGTGTGGTTGGTTAGTGA 422 consensus_8903#6 ------------------------------------------------------------ consensus_8903#5 ------------------------------------------------------------ consensus_8903#3 CGGCCATCACAG------------------------------------------------ 567 consensus_8903#1 GGCTAATTAAATTGTAACTGTGCCGCACACGGGAAATTCCTGCAACAGTATTGGAATGTA 637 consensus_8903#4 ------------------------------------------------------------ consensus_8903#0 TTTTGTTCGCAAACTTAAAAATAACCTGTCAGCGAACGGTAAAGTTCTATTCCACAAAGA 579 consensus_8903#2 TTTTGTTCTGCAACTTTAAAATAACCTGCCAGCGAACGATAAAGCTCTATCCCACACAGA 482 consensus_8903#6 ------------------------------------------------------------ consensus_8903#5 ------------------------------------------------------------ consensus_8903#3 ------------------------------------------------------------ consensus_8903#1 GTAAATTTTAGTACGAAATTTTTGTGGGGCTGATGTATTGTGGTGATGAGATTCTAATCA 697 consensus_8903#4 ------------------------------------------------------------ consensus_8903#0 GCAGTGACGAAGGGCTTTTGGAAGGGCCTAGCA---------AAGGGACCTGGAAGACTG 630 consensus_8903#2 GCAGTGACGAAGGGCTTTTGGAAGGGCCTAAAAGGAAAGCGAAAGGGACCTGGAAGACTG 542 consensus_8903#6 ------------------------------------------------------------ consensus_8903#5 ------------------------------------------------------------ consensus_8903#3 ------------------------------------------------------------ consensus_8903#1 ACGGTTCAAGGATGCAGACCGGTTTGCCATAAACACACGATCGAAAGTATCGAAATGAGG 757 consensus_8903#4 ------------------------------------------------------------ consensus_8903#0 CAGCTTGATCAAGTGACGGACAGAATCAGAGGACAGACAGCGTCGCCCAGCGGCGATACC 690 consensus_8903#2 CAGCTTGAAGCAGAGACGGGCAGAATCAGAGGACAGACAGCGTCGCCCAGCGGCGATACC 602 consensus_8903#6 ------------------------------------------------------------ consensus_8903#5 ------------------------------------------------------------ consensus_8903#3 ------------------------------------------------------------ consensus_8903#1 AGAAATTCGCAACGCAAAAGTTAGATGTGCTGTTAGATAGATTACTTCCCTTTCTACACT 817 consensus_8903#4 ------------------------------------------------------------ consensus_8903#0 CAGACGATATTAGTGGAGTTAATAGTGCCACACAGCTATGACGATCACTGGTACGAGTAA 750 consensus_8903#2 CAGACGATATTAGTGGAGTTAATAGTGCCACACAGCTATGAC------------------ 644 consensus_8903#6 ------------------------------------------------------------ consensus_8903#5 ------------------------------------------------------------ consensus_8903#3 ------------------------------------------------------------ consensus_8903#1 GTCCAAAAAGTGTGACCAAAAGAAGACTTCCCTGATAATGCAGTCAATAGCGATGTTCTA 877 consensus_8903#4 ------------------------------------------------------------ consensus_8903#0 TGGTGGTGGCGGCGGCGGTGGAATGCGGCCTCTGAAGGTAACGACGGTCGGCGACGGTAT 810 consensus_8903#2 ------------------------------------------------------------ consensus_8903#6 ------------------------------------------------------------ consensus_8903#5 ------------------------------------------------------------ consensus_8903#3 ------------------------------------------------------------ consensus_8903#1 ACTGGAGAGGTGAAGATTGATAAACACCTGAAGCGATAGTGGGCTGGGGCTACTAAAGAA 937 consensus_8903#4 ------------------------------------------------------------ consensus_8903#0 GGTCGGGAAGACCTGCATGCTCATCACCTACACGCAGAACGAGTTCCCGAGCGAGTACGT 870 consensus_8903#2 ------------------------------------------------------------ consensus_8903#6 ------------------------------------------------------------ consensus_8903#5 ------------------------------------------------------------ consensus_8903#3 ------------------------------------------------------------ consensus_8903#1 GGGGCATGTTGGCGCGTAGATAGCACAGGAACAAGAATTGTTAAAAGAGTATTTATAGTG 997 consensus_8903#4 ------------------------------------------------------------ consensus_8903#0 CCCGACCGTGTTCGACAATCACGCGTGCAACATTGTGGTGGACGGGGCCGATTACGCGCT 930 consensus_8903#2 ------------------------------------------------------------ consensus_8903#6 ------------------------------------------------------------ consensus_8903#5 ------------------------------------------------------------ consensus_8903#3 ------------------------------------------------------------ consensus_8903#1 ATAGAGAAGGCGAAGGAAAGATTGGTACGCGTGTTGAAAGCGGAAATGGAAAACTGAAAG 1057 consensus_8903#4 ------------------------------------------------------------ consensus_8903#0 AACGCTGTGGGACACGGCCGGCCAGGAAGATTACGAACGGTTGCGACCGCTCAGCTATCC 990 consensus_8903#2 ------------------------------------------------------------ consensus_8903#6 ------------------------------------------------------------ consensus_8903#5 ------------------------------------------------------------ consensus_8903#3 ------------------------------------------------------------ consensus_8903#1 GGTGTAAGCAAACGACGGTAGGG------------------------------------- 1080 consensus_8903#4 ------------------------------------------------------------ consensus_8903#0 CAACACCGACTGTTTCCTCATCTGCTACTCCATATCGAACCGCACATCTTTCGATAACGT 1050 consensus_8903#2 ------------------------------------------------------------ consensus_8903#6 ------------------------------------------------------------ consensus_8903#5 ------------------------------------------------------------ consensus_8903#3 ------------------------------------------------------------ consensus_8903#1 ------------------------------------------------------------ consensus_8903#4 ------------------------------------------------------------ consensus_8903#0 GCTGTCCAAGTGGTACCCGGAGATAAGACATTTTGCACCCTCCGTACCGATCGTGCTTGT 1110 consensus_8903#2 ------------------------------------------------------------ consensus_8903#6 ------------------------------------------------------------ consensus_8903#5 ------------------------------------------------------------ consensus_8903#3 ------------------------------------------------------------ consensus_8903#1 ------------------------------------------------------------ consensus_8903#4 ------------------------------------------------------------ consensus_8903#0 CGGCACCAAGAGCGATCTGCGTGTGCCCGGGTCGGAGAAGTTTGTCACCACGGCCGAGGG 1170 consensus_8903#2 ------------------------------------------------------------ consensus_8903#6 ------------------------------------------------------------ consensus_8903#5 ------------------------------------------------------------ consensus_8903#3 ------------------------------------------------------------ consensus_8903#1 ------------------------------------------------------------ consensus_8903#4 ------------------------------------------------------------ consensus_8903#0 CAAGAAGCTGAAGCACAAAATCAAAGCCTACGCGCTGGTGGAATGTTCCGCGAAGCGGAA 1230 consensus_8903#2 ------------------------------------------------------------ consensus_8903#6 ------------------------------------------------------------ consensus_8903#5 ------------------------------------------------------------ consensus_8903#3 ------------------------------------------------------------ consensus_8903#1 ------------------------------------------------------------ consensus_8903#4 ------------------------------------------------------------ consensus_8903#0 GCTCAACCTTGCCGAGGTGTTTGACGAGGC 1260 consensus_8903#2 ------------------------------ consensus_8903#6 ------------------------------ consensus_8903#5 ------------------------------ consensus_8903#3 ------------------------------ consensus_8903#1 ------------------------------ consensus_8903#4 ------------------------------ |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||