cluster # 8906

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Anopheles gambiae
cluster # 8906 cluster # 8906 Sequences # 13 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8906#0 length = 1954 sequences # 10

consensus_8906#1 length = 676 sequences # 2
consensus_8906#2 length = 95 sequences # 1

consensusID : consensus_8906#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 1954
fasta sequence

                              [GAAACCGGGACATTTACGGCTATCATACAATAATCATTTATTGTACAGCATCATTATTGCAGGACCAGGACTATTTCCCCGCTTTTTTCAATCGGACACGTCCATCGATTCCTC-ATCGCTATCCTTTTTAGAATACCCATTTTGCCGCCGCTTCACAAATGATCC-GAAATCACCATTCTCATGCACCGTCTCATCCTCCTCGCCGTCATCGTCATCATCATCATCATCGTACATCTCCTCGTTGGACGAACCGGGCAGATCTGGATCATCTTTCTCTAGCATGGATTCAACGTCGGAATCGTCGCCCTCCTGGTACACCAGCACGTTCCCACTGGTTATATCGTCCAGATTAGCCGCCTGGTTTTTGCTGCG-GTCGATCTGATCGATCAGCAAGCCTAATCGGCCACGCAGCTTTGAAAGTGAA-TCCAAGTGTTCCACCCGGTACTCGATGATTCCGAGACAGGTGCTGAAGTTGGCGAGCAGATTTATCGAACCGAGCGCCATCAGCTGGCTGGCGTGTATGCTGATCAGCGGTTTCAACCAACAGACGGCTGTTTTGACGTGCATC-GTTTTCATCTGCATCAAGTGGGACAGTTCGTTTAGCAGCGGGCTAACGTATTGCGAA-GGAAGGCGCTCGAGCGTTTGCTGAATCATTTCCGCATCGTCCACCGCAAAGACGCTCTTCAGCAGGGTGGCATCGCGACTGTGCATGCCTTGCATCAGCAGGTGAATCATGTTCTTCGAGCTCGTCTTGGGCGTGGAAAGGTTTTCCAGCCGAACTTCCATTGGAATTTCCACCTCCTTGACCGATTTTCTAGCAGAATTTGCCGAGTTTAGATATTCGACCTTGTCCAAGATGGGGGTCTTTGCCTTCAGCTCCCCATCCTTCGCTTTGCCTTCCATCACCTTCATCGGCTCGCGGATGATAACGTTCTGCTTTACGTCCTCTTCGATGGCAATGTGCT-CGAATCGCACGCTGTGCTCCGTTCCGTAGCCGAGCAGTATCTGCTCCTGCTGGGCCGCGTATTGAACGGTGGCCACAAACACGGGCAGCCGGTCGACGGCTTGCTTCTTGGTGCTCACCGTGTCGACGGCGATCTCGAACGTGTGGGCCGCCCGGTACGGTTTCTTCACGCTCAGCTTGCCCATATCGCGCACGAAGTAGTGCGCAACGCCAGTCCGCGACACCGCCACCAGGTGCAGTTTCCGGTCCACAATCTTCGGCGCAATGTATTCGGGCACATCGTCCAGGGCGAATGCTGCCACCGCCGAGGTGGCGTCTTCGTCGCTGAGCGACCACAGGGAAAGGTTCCGATCGTTCACCGACCCGGACAGGGCGTACACGTGCTCCTCGTCGAGCGATAT-CAGCTGCAGCAGCTGCGTATTGGCCGTATGGCCGGCCAGCGTCCGCTCCACCGTGCCACTCTCGGCGTCCCACAGTTTTAGCTGCTTGGCGCCGGTAAGGATCTTGTCGCCGTGGGCCAGCACGCAGCTCAGCTTCTCCACCCCGATGTGGTGCACCTTCTGTTGCTTGCACTGGCTAATGCTCCACTCGATCACCTTCCCATCAGCACCGGCCGTGTAGAGTGTGTCCGGATTGTGGCTCGCGTTGAAGTAGATTGCCGTGATGGGTGCCGTATGGCCGTCGCCCTTGCACGACCGCGGGATGCTGGCCGTCTTGGCTGGAGCATCGCCCCCGACCTGAAACCAGGCAAAGCTGGTGCACGGCACGTTCAGGTGCATGTTCGGCGTGTACACCTGATGGATGTCGCTCGTTTCCACATCGTGCACGACGAACTTGCCCTGCTGGCTGATGTAGGCGCAGTACTTGCCGCAGGGCGAAAACTCTGCGCGATATGCTAAACATTGT-CCGTGTGTATGATGGTTTTTAATTCACTTTTGCGGGGGACTTGTAAATAACATGTGGATTTTGAAATCCCACAAAACAGCGCGG]

[+] EMBL CNS09LZU             [GAAACCGGGACATTTACGGCTATCATACAATAATCATTTATTGTACAGCATCATTATTGCAGGACCAGGACTATTTCCCCGCTTTTTTCAATCGGACACGTCCATCGATTCCTCTATCGCTATCCTTTTTAGAATACCCATTTTGCCGCCGCTTCACAAATGATCCTGAAATCACCATTCTCATGCACCGTCTCATCCTCCTCGCCGTCATCGTCATCATCATCATCATCGTACATCTCCTCGTTGGACGAACCGGGCAGATCTGGATCATCTTTCTCTAGCATGGATTCAACGTCGGAATCGTCGCCCTCCTGGTACACCAGCACGTTCCCACTGGTTATATCGTCCAGATTAGCCGCCTGGTTTTTGCTGCGCGTCGATCTGATCGATCAGCAAGCCTAATC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CNS08DDS             [                                   ATTTATTGTACAGCATCATTAGTGCAGGACCAGGACTATTTCAGCGCTTTTTTCAATCGGACACGTCCATCGATTCCTC ATCGCTATCCTTTTTAGAATACCCATTTTGCCGCCGCTTCACAAATGATCC GAAATCACCATTCTCATGCACCGTCTCATCCTCCTCGCCGTCATCGTCATCATCATCATCATCGTACATCTCCTCGTTGGACGAACCGGGCAGATCTGGATCATCTTTCTCTAGCATGGATTCAACGTCGGAATCGTCGCCCTCCTGGTACACCAGCACGTTCCCACTGGTTATATCGTCCAGATTAGCCGCCTGGTTTTTGCTGCG GTCGATCTGATCGATCAGCAAGCCTAATCGGCCACGCAGCTTTGAAAGTGAA TCGGGGTGTTCCACCCGGTACTCGATGATTCCGAGACAGGTGCTGAAGTTGGCGAGCAGATTTATCGAACCGAGCGCCATCAGCTGGCTGGCGTGTATGCTGATCAGCGGTTTCAACCAACAGACGGCTGTTTTGACGTGCATC GTTTTCATCTGCATCAAGTGGGACAGTTCGTTTAGCAGCGGGCTAACGTATTGCGAA GGAAGGCGCTCGAGCGTTTGCTGAATCATTTCCGCATCGTCCACCGCAAAGACGCTCTTCAGCAGGGTGGCATCGCGACTGTGCATGCCTTGCATCAGCAGGTGAATCATGTTCTTCGAGCTCGTCTTGGGCGTGGAAAGGTTTTCCAGCCGAACTTCCATTGGAATTTCCACCTCCTTAACCGATTTCCTAGCAGAATTTGCCGAGTTTAGATATTCGACCTTGTCCAAGATGGGGGTCTTTGCCTTCAGCTCCCCATCCTTCACTTTGCCTTCCATCACCTTCATCGGCTCGCGGATGATAACGTTCTGCTTTACGTCCTCTTCGATGGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CNS095AT             [                                                                                                                                                                  ATCC GAAATCACCATTCTCATGCACCGTCTCATCCTCCTCGCCGTCATCGTCATCATCATCATCATCGTACATCTCCTCGTTGGACGAACCGGGCAGATCTGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL BM611573             [                                                                                                                                                                                                                                                                                                                                                            AGATTAGCCGCCTGGTTTTTGCTGCG GTCGATCTGATCGATCAGCAAGCCTAATCGGCCACGCAGCTTTGAAAGTGAA TTCAAGTGTTCCACCCGGTACTCGATGATTCCGAGACAGGTGCTGAAGTTGGCGAGCAGATTTATCGAACCGAGCGCCATCAGCTGGCTGGCGTGTATGCTGATCAGCGGTTTCAACCAACAGACGGCTGTTTTGACGTGCATC GTTTTCATCTGCATCAAGTGGGACAGTTCGTTTAGCAGCGGGCTAACGTATTGCGAA GGAAGGCGCTCGAGCGTTTGCTGAATCATTTCCGCATCGTCCACCGCAAAGACGCTCTTCAGCAGGGTGGCATCGCGACTGTGCATGCCTTGCATCAGCAGGTGAATCATGTTCTTCGAGCTCGTCTTGGGCGTGGAAAGGTTTTCCAGCCGAACTTCCATTGGAATTTCCACCTCCTTGACCGATTTTCTAGCAGAATTTGCCGAGTTTAGATATTCGACCTTGTCCcgg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL BM626010             [                                                                                                                                                                                                                                                                                                                                                                                          GATCTGATCGATCAGCAAGCTTAATCGGCCACGCAGCTTTGAAAGTGAATTCCAAGTGTTCCACCCGGTACTCGATGATTCCGAGACAGGTGCTGAAGTTGGCGAGCAGATTTATCGAACCGAGCGCCATCAGCTGGCTGGCGTGTATGCTGATCAGCGGTTTCAACCAACAGACGGCTGTTTTGACGTGCATC GTTTTCATCTGCATCAAGTGGGACAGTTCGTTTAGCAGCGGGCTAACGTATTGCGAA GGAAGGCGCTCGAGCGTTTGCTGAATCATTTCCGCATCGTCCACCGCAAAGACGCTCTTCAGCAGGGTGGCATCGCGACTGTGCATGCCTTGCATCAGCAGGTGAATCATGTTCTTCGAGCTCGTCTTGGGCGTGGAAAGGTTTTCCAGCCGAACTTCCATTGGAATTTCCACCTCCTTGACCGATTTTCTAGCAGAATTTGCCGAGTTTAGATATTCGACCTTGTCCAAGATGGGGGTCTTTGCCTTCAGCTCCCCATCCTTCGCTTTGCCTTCCATCACCTTCATCGGCTCGCGGATGATAACGTTCTGCTTTACGTCCTCTTCGATGGCAATGTGCT CGAATCGCACGCTGTGCTCCGTTCCGTAGCCGAACAGTATCTGCTCCTGCTGGGCCGCGTATTGAACGGTGGCCACAAACACGGGCAGCCGGTCGg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL BX619670             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     AGCGGTTTCAACCAACAGACGGCTGTTTTGACGTGCATCGGTTTTCATCTGCATCAAGTGGGACAGTTCGTTTAGCAGCGGGCTAACGTATTGCGAAGGGAAGGCGCTCGAGCGTTTGCTGAATCATTTCCGCATCGTCCACCGCAAAGACGCTCTTCAGCAGGGTGGCATCGCGACTGTGCATGCCTTGCATCAGCAGGTGAATCATGTTCTTCGAGCTCGTCTTGGGCGTGGAAAGGTTTTCCAGCCGAACTTCCATTGGAATTTCCACCTCCTTGACCGATTTTCTAGCAGAATTTGCCGAGTTTAGATATTCGACCTTGTCCAAGATGGGGGTCTTTGCCTTCAGCTCCCCATCCTTCGCTTTGCCTTCCATCACCTTCATCGGCTCGCGGATGATAACGTTCTGCTTTACGTCCTCTTCGATGGCAATGTGCTANGAATCGCACGCTGTGNTCCGTTCCGTAGCCGAGCAGTAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL BM596072             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                CTTTGCCTTCCATCACCTTCATCGGCTCGCGGATGATAACGTTCTGCTTTACGTCCTCTTCGATGGCAATGTGCT CGAATCGCACGCTGTGCTCCGTTCCGTAGCCGAGCAGTATCTGCTCCTGCTGGGCCGCGTATTGAACGGTGGCCACAAACACGGGCAGCCGGTCGACGGCTTGCTTCTTGGTGCTCACCGTGTCGACGGCGATCTCGAACGTGTGGGCCGCCCGGTACGGTTTCTTCACGCTCAGCTTGCCCATATCGCGCACGAAGTAGTGCGCAACGCCAGTCCGCGACACCGCCACCAGGTGCAGTTTCCGGTCCACAATCTTCGGCGCAATGTATTCGGGCACATCGTCCAGGGCGAATGCTGCCACCGCCGAGGTGGCGTCTTCGTCGCAGAGCGACCACAGGGAGAGGTTCCGATCGTTCACCGACCCGGACAGGGCGTACACGTGCTCCTCGTCGAGCGATAT CAGCTGCAGCAGCTGCGTATTGCCTGTATGGCCGGCCAGCGTCCGCTCCACCGTGCCACTCTCGGCGTCCCACAGTTTTAGCTGCTTGGCGCCGGTAAGGATCTTGTCGCCGTGGGCCAGCACGCAGCTCAACTTCTCCACCCCGATGTGGTGCACCTTCTGTTGCTTGCACTGGCTAATGCTCCACTCGATCACCTTCCCcgg                                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL BM634984             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CCTGCTGGGCCGCGTATTGAACGGTGGCCACAAACACGGGCAGCCGGTCGACGGCTTGCTTCTTGGTGCTCACCGTGTCGACGGCGATCTCGAACGTGTGGGCCGCCCGGTACGGTTTCTTCACGCTCAGTTTGCCCATATCGCGCACGAAGTAGTGCGCAACGCCAGTCCGCGACACCGCCACCAGGTGCAGTTTCCGGTCCACAATCTTCGGCGCAATGTATTCGGGCACATCGTCCAGGGCGAATGCTGCCACCGCCGAGGTAGCGTCTTCGTCGCTGAGCGACCACAGGGAAAGGTTCCGATCGTTCACCGACCCGGACAGGGCGTACACGTGCTCCTCATCGAGCGATAT CAGCTGCAGCAGCTGCGTATTGGCCGTATGGCCGGCCAGCGTCCGCTCCACCGTGCCACTCTCGGCGTCCCACAGTTTTAGCTGCTTGGCGCCGGTAAGGATCTTGTCGCCGTAGGCCAGCACGCAGCTCAGCTTCTCCACCCCGATGTGGTGCACCTTCTGTTGCTTGCACTGGCTAATGCTCCACTCGATCACCTTCCCATCAGCACCGGCCGTGTAGAGTGTGTCCGGATTGTGGCTCGCGTTGAAGTAGATTGCCGTGATGGGTGCCGTATGGCCGTCGCCCTTGCACGACCGCGG                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CNS08N0B             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          taCGGCGCAATATATTCGGGCACATCGTCCAGGGCGAATGCTGCCACCGCCGAGGTGGCCTCTTCGTCGCTGAGCGACCACAGGGAAAGGTTCCGATCGTTCACCGACCCGGACAGGGCGTACACGTGCTCCTCGTCGAGCGATATACAGCTGCAGCAGCTGCGTATTGGCCGTATGGCCGGCCAGCGTCCGCTCCACCGTGCCACTCTCGGCGTCCCACAGTTTTAGCTGCTTGGCGCCGGTAAGGATCTTGTCGCCGTGGCCCAGCACGCAGCTCAGCTTCTCCACCCCGATGTGGTGCACCTTCTGTTGCTTGCACTGGCTAATGCTCCACTCGATCACCTTCCCATCGGCACCGGCCGTGTAGAGTGTGTCCGGATTGTGGCTCGCGTTGAAGTAGATTGCCGTGATGGGTGCCGTATGGCCGTCGCCCTTGCACGACCGTTCGATGCTGGCCGTCTTGGCTGGAGCATCGCCCCCGACCTGAAACCAGGCAAAGCTGGTGCACGGCACGTTCAGGTGCATGTTCGGCGTGTACACCTGATGGATGTCGCTCGTTTCCACATCGTGCACGACGAACTTGCCCTGCTGGCTGATGTAGGCGCAGTACTTGCCGCAGGGCGAAAACTCTGCGCGATATGCTAAACATTGT CCGTGTGTATGATGGTTTTTAATTCAC                                                         ]
[-] EMBL BM583428             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               TCGTGCACGACGAACTTGCCCTGCTGGCTGATGTAGGCGCAGTACTTGCCGCAGGGCGAAAACTCT CGCGATATGCTAAACATTGTGCCGTGTGTATGATGGTTTTTAATTCACTTTTGCGGGGGACTTGTAAATAACATGTGGATTTTGAAATCCCACAAAACAGCGCGG]




>consensus_8906#0
GAAACCGGGACATTTACGGCTATCATACAATAATCATTTATTGTACAGCATCATTATTGC
AGGACCAGGACTATTTCCCCGCTTTTTTCAATCGGACACGTCCATCGATTCCTCATCGCT
ATCCTTTTTAGAATACCCATTTTGCCGCCGCTTCACAAATGATCCGAAATCACCATTCTC
ATGCACCGTCTCATCCTCCTCGCCGTCATCGTCATCATCATCATCATCGTACATCTCCTC
GTTGGACGAACCGGGCAGATCTGGATCATCTTTCTCTAGCATGGATTCAACGTCGGAATC
GTCGCCCTCCTGGTACACCAGCACGTTCCCACTGGTTATATCGTCCAGATTAGCCGCCTG
GTTTTTGCTGCGGTCGATCTGATCGATCAGCAAGCCTAATCGGCCACGCAGCTTTGAAAG
TGAATCCAAGTGTTCCACCCGGTACTCGATGATTCCGAGACAGGTGCTGAAGTTGGCGAG
CAGATTTATCGAACCGAGCGCCATCAGCTGGCTGGCGTGTATGCTGATCAGCGGTTTCAA
CCAACAGACGGCTGTTTTGACGTGCATCGTTTTCATCTGCATCAAGTGGGACAGTTCGTT
TAGCAGCGGGCTAACGTATTGCGAAGGAAGGCGCTCGAGCGTTTGCTGAATCATTTCCGC
ATCGTCCACCGCAAAGACGCTCTTCAGCAGGGTGGCATCGCGACTGTGCATGCCTTGCAT
CAGCAGGTGAATCATGTTCTTCGAGCTCGTCTTGGGCGTGGAAAGGTTTTCCAGCCGAAC
TTCCATTGGAATTTCCACCTCCTTGACCGATTTTCTAGCAGAATTTGCCGAGTTTAGATA
TTCGACCTTGTCCAAGATGGGGGTCTTTGCCTTCAGCTCCCCATCCTTCGCTTTGCCTTC
CATCACCTTCATCGGCTCGCGGATGATAACGTTCTGCTTTACGTCCTCTTCGATGGCAAT
GTGCTCGAATCGCACGCTGTGCTCCGTTCCGTAGCCGAGCAGTATCTGCTCCTGCTGGGC
CGCGTATTGAACGGTGGCCACAAACACGGGCAGCCGGTCGACGGCTTGCTTCTTGGTGCT
CACCGTGTCGACGGCGATCTCGAACGTGTGGGCCGCCCGGTACGGTTTCTTCACGCTCAG
CTTGCCCATATCGCGCACGAAGTAGTGCGCAACGCCAGTCCGCGACACCGCCACCAGGTG
CAGTTTCCGGTCCACAATCTTCGGCGCAATGTATTCGGGCACATCGTCCAGGGCGAATGC
TGCCACCGCCGAGGTGGCGTCTTCGTCGCTGAGCGACCACAGGGAAAGGTTCCGATCGTT
CACCGACCCGGACAGGGCGTACACGTGCTCCTCGTCGAGCGATATCAGCTGCAGCAGCTG
CGTATTGGCCGTATGGCCGGCCAGCGTCCGCTCCACCGTGCCACTCTCGGCGTCCCACAG
TTTTAGCTGCTTGGCGCCGGTAAGGATCTTGTCGCCGTGGGCCAGCACGCAGCTCAGCTT
CTCCACCCCGATGTGGTGCACCTTCTGTTGCTTGCACTGGCTAATGCTCCACTCGATCAC
CTTCCCATCAGCACCGGCCGTGTAGAGTGTGTCCGGATTGTGGCTCGCGTTGAAGTAGAT
TGCCGTGATGGGTGCCGTATGGCCGTCGCCCTTGCACGACCGCGGGATGCTGGCCGTCTT
GGCTGGAGCATCGCCCCCGACCTGAAACCAGGCAAAGCTGGTGCACGGCACGTTCAGGTG
CATGTTCGGCGTGTACACCTGATGGATGTCGCTCGTTTCCACATCGTGCACGACGAACTT
GCCCTGCTGGCTGATGTAGGCGCAGTACTTGCCGCAGGGCGAAAACTCTGCGCGATATGC
TAAACATTGTCCGTGTGTATGATGGTTTTTAATTCACTTTTGCGGGGGACTTGTAAATAA
CATGTGGATTTTGAAATCCCACAAAACAGCGCGG

consensusID : consensus_8906#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 676
fasta sequence

                              [TCATCGGCTCGCGGATGATAACGTTCTGCTTTACGTCCTCTTCGATGGCAATGTGCTCGAATTCGCACGCTGTGCTCCGTTCCGTAGCCGAGCAGTATCTGCTCCTGCTGGGCCGCGTATTGAACGGTGGCCACAAACACGGGCAGCCGATCGACGGCTTGCTTCTTGGTACTCACTGTGTCGACGGCGATCTCGAACGTGTGGGCCGCCCGGTACGGTTTCTTCACGTTCAGCTTGCCCATATCGCGCACGAAGTAGTGCGCAACGCCAGTCCGCGACACTGCCACCAGGGGCAGTTTCCGGTCCACAATCTTCGGCGCAATGTATTCGGGCACATCGTCCAGGGCGAATGCTGCCACCGCCGAGGTGGCGTCTTCGTCGCTGAGCGACCACAGGGAAAGGTTCCGATCGTTCACCGACCTGAAACCAGGCAAAGCTGGTGCACGGCACGTTCAGGTGCATGTTCGGCGTGTACACCTGATGGATGTCGCTCGTTTCCACATCGTGCACGACGAACTTGCCCTGCTGGCTGATGTAGGCGCAGTACTTGCCGCAGGGCGAAAACTCTCGCGATATGCTAAACATTGTCCGTGTGTATGATGGTTTTTAATTCACTTTTGCGGGGGACTTGTAAATAACATGTGGATTTTGAAACCCCACAAAACAGCGTCTCCTG]

[-] EMBL CNS08DDR             [TCATCGGCTCGCGGATGATAACGTTCTGCTTTACGTCCTCTTCGATGGCAATGTGCTCGAATTCGCACGCTGTGCTCCGTTCCGTAGCCGAGCAGTATCTGCTCCTGCTGGGCCGCGTATTGAACGGTGGCCACAAACACGGGCAGCCGATCGACGGCTTGCTTCTTGGTACTCACTGTGTCGACGGCGATCTCGAACGTGTGGGCCGCCCGGTACGGTTTCTTCACGTTCAGCTTGCCCATATCGCGCACGAAGTAGTGCGCAACGCCAGTCCGCGACACTGCCACCAGGGGCAGTTTCCGGTCCACAATCTTCGGCGCAATGTATTCGGGCACATCGTCCAGGGCGAATGCTGCCACCGCCGAGGTGGCGTCTTCGTCGCTGAGCGACCACAGGGAAAGGTTCCGATCGTTCACCGACCTGAAACCAGGCAAAGCTGGTGCACGGCACGTTCAGGTGCATGTTCGGCGTGTACACCTGATGGATGTCGCTCGTTTCCACATCGTGCACGACGAACTTGCCCTGCTGGCTGATGTAGGCGCAGTACTTGCCGCAGGGCGAAAACTCTCGCGATATGCTAAACATTGTCCGTGTGTATGATGGTTTTTAATTCACTTTTGCGGGGGACTTGTAAATAACATGTGGATTTTGAAACCCCACAAAACAGCGTCTCCTG]
[-] EMBL BX604377             [                                                                                                                       TTGAACGGTGGCCACAAACACGGGCAGCCGATCGACGGCTTGCTTCTTGGTACTCACTGCGTCGACGGCGATCTCGAACGTGTGGGCCGCCCGGTACGGTTTCTTCACGCTCAGCTTGCCCATATCGCGCACGAAGTAGTGCGCAACGCCAGTCCGCGACACGGCCACCAGG                                                                                                                                                                                                                                                                                                                                                                                                 ]




>consensus_8906#1
TCATCGGCTCGCGGATGATAACGTTCTGCTTTACGTCCTCTTCGATGGCAATGTGCTCGA
ATTCGCACGCTGTGCTCCGTTCCGTAGCCGAGCAGTATCTGCTCCTGCTGGGCCGCGTAT
TGAACGGTGGCCACAAACACGGGCAGCCGATCGACGGCTTGCTTCTTGGTACTCACTGTG
TCGACGGCGATCTCGAACGTGTGGGCCGCCCGGTACGGTTTCTTCACGTTCAGCTTGCCC
ATATCGCGCACGAAGTAGTGCGCAACGCCAGTCCGCGACACTGCCACCAGGGGCAGTTTC
CGGTCCACAATCTTCGGCGCAATGTATTCGGGCACATCGTCCAGGGCGAATGCTGCCACC
GCCGAGGTGGCGTCTTCGTCGCTGAGCGACCACAGGGAAAGGTTCCGATCGTTCACCGAC
CTGAAACCAGGCAAAGCTGGTGCACGGCACGTTCAGGTGCATGTTCGGCGTGTACACCTG
ATGGATGTCGCTCGTTTCCACATCGTGCACGACGAACTTGCCCTGCTGGCTGATGTAGGC
GCAGTACTTGCCGCAGGGCGAAAACTCTCGCGATATGCTAAACATTGTCCGTGTGTATGA
TGGTTTTTAATTCACTTTTGCGGGGGACTTGTAAATAACATGTGGATTTTGAAACCCCAC
AAAACAGCGTCTCCTG

consensusID : consensus_8906#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 95
fasta sequence

                              [GAAGCGGAAAAGAATCAGCAAACGCCCGAGCGCCTTCCTTCGCAATACGTGAGCCCGCTGCTAAACGAACTGGCCCACTGGAGGCAGAAGAAAAC]

[+] EMBL BX604996             [GAAGCGGAAAAGAATCAGCAAACGCCCGAGCGCCTTCCTTCGCAATACGTGAGCCCGCTGCTAAACGAACTGGCCCACTGGAGGCAGAAGAAAAC]




>consensus_8906#2
GAAGCGGAAAAGAATCAGCAAACGCCCGAGCGCCTTCCTTCGCAATACGTGAGCCCGCTG
CTAAACGAACTGGCCCACTGGAGGCAGAAGAAAAC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8906#0      GAAACCGGGACATTTACGGCTATCATACAATAATCATTTATTGTACAGCATCATTATTGC 60
consensus_8906#1      ------------------------------------------------------------
consensus_8906#2      ------------------------------------------------------------
                                                                                  

consensus_8906#0      AGGACCAGGACTATTTCCCCGCTTTTTTCAATCGGACACGTCCATCGATTCCTCATCGCT 120
consensus_8906#1      ------------------------------------------------------------
consensus_8906#2      ------------------------------------------------------------
                                                                                  

consensus_8906#0      ATCCTTTTTAGAATACCCATTTTGCCGCCGCTTCACAAATGATCCGAAATCACCATTCTC 180
consensus_8906#1      ------------------------------------------------------------
consensus_8906#2      ------------------------------------------------------------
                                                                                  

consensus_8906#0      ATGCACCGTCTCATCCTCCTCGCCGTCATCGTCATCATCATCATCATCGTACATCTCCTC 240
consensus_8906#1      ------------------------------------------------------------
consensus_8906#2      ------------------------------------------------------------
                                                                                  

consensus_8906#0      GTTGGACGAACCGGGCAGATCTGGATCATCTTTCTCTAGCATGGATTCAACGTCGGAATC 300
consensus_8906#1      ------------------------------------------------------------
consensus_8906#2      ------------------------------------------------------------
                                                                                  

consensus_8906#0      GTCGCCCTCCTGGTACACCAGCACGTTCCCACTGGTTATATCGTCCAGATTAGCCGCCTG 360
consensus_8906#1      ------------------------------------------------------------
consensus_8906#2      ------------------------------------------------------------
                                                                                  

consensus_8906#0      GTTTTTGCTGCGGTCGATCTGATCGATCAGCAAGCCTAATCGGCCACGCAGCTTTGAAAG 420
consensus_8906#1      ------------------------------------------------------------
consensus_8906#2      ------------------------------------------------------------
                                                                                  

consensus_8906#0      TGAATCCAAGTGTTCCACCCGGTACTCGATGATTCCGAGACAGGTGCTGAAGTTGGCGAG 480
consensus_8906#1      ------------------------------------------------------------
consensus_8906#2      ------------------------------------------------------------
                                                                                  

consensus_8906#0      CAGATTTATCGAACCGAGCGCCATCAGCTGGCTGGCGTGTATGCTGATCAGCGGTTTCAA 540
consensus_8906#1      ------------------------------------------------------------
consensus_8906#2      ------------------------------------------------------------
                                                                                  

consensus_8906#0      CCAACAGACGGCTGTTTTGACGTGCATCGTTTTCATCTGCATCAAGTGGGACAGTTCGTT 600
consensus_8906#1      ------------------------------------------------------------
consensus_8906#2      ------------------------------------------------------------
                                                                                  

consensus_8906#0      TAGCAGCGGGCTAACGTATTGCGAAGGAAGGCGCTCGAGCGTTTGCTGAATCATTTCCGC 660
consensus_8906#1      ------------------------------------------------------------
consensus_8906#2      ------------------------------------------------------------
                                                                                  

consensus_8906#0      ATCGTCCACCGCAAAGACGCTCTTCAGCAGGGTGGCATCGCGACTGTGCATGCCTTGCAT 720
consensus_8906#1      ------------------------------------------------------------
consensus_8906#2      ------------------------------------------------------------
                                                                                  

consensus_8906#0      CAGCAGGTGAATCATGTTCTTCGAGCTCGTCTTGGGCGTGGAAAGGTTTTCCAGCCGAAC 780
consensus_8906#1      ------------------------------------------------------------
consensus_8906#2      ------------------------------------------------------------
                                                                                  

consensus_8906#0      TTCCATTGGAATTTCCACCTCCTTGACCGATTTTCTAGCAGAATTTGCCGAGTTTAGATA 840
consensus_8906#1      ------------------------------------------------------------
consensus_8906#2      ------------------------------------------------------------
                                                                                  

consensus_8906#0      TTCGACCTTGTCCAAGATGGGGGTCTTTGCCTTCAGCTCCCCATCCTTCGCTTTGCCTTC 900
consensus_8906#1      ------------------------------------------------------------
consensus_8906#2      ------------------------------------------------------------
                                                                                  

consensus_8906#0      CATCACCTTCATCGGCTCGCGGATGATAACGTTCTGCTTTACGTCCTCTTCGATGGCAAT 960
consensus_8906#1      --------TCATCGGCTCGCGGATGATAACGTTCTGCTTTACGTCCTCTTCGATGGCAAT 52
consensus_8906#2      -------------------------------------------------------GAAGC 5
                                                                             * *  

consensus_8906#0      GTGCTCGAAT-CGCACGCTGTGCTCCGTTCCGTAGCCGAGCAGTATCTGCTCCTGCTGGG 1019
consensus_8906#1      GTGCTCGAATTCGCACGCTGTGCTCCGTTCCGTAGCCGAGCAGTATCTGCTCCTGCTGGG 112
consensus_8906#2      GGAAAAGAATCAGCAAAC---GCCCGAGCGCCTTCCTTCGCAATACGTGAGCCCGCTGCT 62
                      *     ****  ***  *   ** *     * *  *   *** **  **  ** ****  

consensus_8906#0      CCGCGTATTGAACGG-TGGCCACAAACACGGGCAGCCGGTCGACGGCTTGCTTCTTGGTG 1078
consensus_8906#1      CCGCGTATTGAACGG-TGGCCACAAACACGGGCAGCCGATCGACGGCTTGCTTCTTGGTA 171
consensus_8906#2      AAACGAACTGGCCCACTGGAGGCAGAAGAAAAC--------------------------- 95
                         ** * **  *   ***   ** *      *                           

consensus_8906#0      CTCACCGTGTCGACGGCGATCTCGAACGTGTGGGCCGCCCGGTACGGTTTCTTCACGCTC 1138
consensus_8906#1      CTCACTGTGTCGACGGCGATCTCGAACGTGTGGGCCGCCCGGTACGGTTTCTTCACGTTC 231
consensus_8906#2      ------------------------------------------------------------
                                                                                  

consensus_8906#0      AGCTTGCCCATATCGCGCACGAAGTAGTGCGCAACGCCAGTCCGCGACACCGCCACCAGG 1198
consensus_8906#1      AGCTTGCCCATATCGCGCACGAAGTAGTGCGCAACGCCAGTCCGCGACACTGCCACCAGG 291
consensus_8906#2      ------------------------------------------------------------
                                                                                  

consensus_8906#0      TGCAGTTTCCGGTCCACAATCTTCGGCGCAATGTATTCGGGCACATCGTCCAGGGCGAAT 1258
consensus_8906#1      GGCAGTTTCCGGTCCACAATCTTCGGCGCAATGTATTCGGGCACATCGTCCAGGGCGAAT 351
consensus_8906#2      ------------------------------------------------------------
                                                                                  

consensus_8906#0      GCTGCCACCGCCGAGGTGGCGTCTTCGTCGCTGAGCGACCACAGGGAAAGGTTCCGATCG 1318
consensus_8906#1      GCTGCCACCGCCGAGGTGGCGTCTTCGTCGCTGAGCGACCACAGGGAAAGGTTCCGATCG 411
consensus_8906#2      ------------------------------------------------------------
                                                                                  

consensus_8906#0      TTCACCGACCCGGACAGGGCGTACACGTGCTCCTCGTCGAGCGATATCAGCTGCAGCAGC 1378
consensus_8906#1      TTCACCGACCTGAA-ACCAGGCAAAGCTGGTGCACGGCACGT----TCAGGTGCATGTTC 466
consensus_8906#2      ------------------------------------------------------------
                                                                                  

consensus_8906#0      TGCGTATTGGCCGTATGGCCGGCCAGCGTCCGCTCCACCGTGCCACTCTCGGCGTCCCAC 1438
consensus_8906#1      GGCGTGTACACCTGATGGATGTCGCTCGTTT-CCACATCGTGC--------ACGACGAAC 517
consensus_8906#2      ------------------------------------------------------------
                                                                                  

consensus_8906#0      AGTTTTAGCTGCTTGGCGCCGGTAAGGATCTTGTCGCCGTGGGCCAGCACGCAGCTCAGC 1498
consensus_8906#1      TTGCCCTGCTGGCTGATGTAGGCGCAGTACTTGCCGCAG--GGCGAAAACTC-------- 567
consensus_8906#2      ------------------------------------------------------------
                                                                                  

consensus_8906#0      TTCTCCACCCCGATGTGGTGCACCTTCTGTTGCTTGCACTGGCTAATGCTCCACTCGATC 1558
consensus_8906#1      -------TCGCGATATGCTAAACATTGT-CCGTGTGTA-----TGATGGTTT-TTAATTC 613
consensus_8906#2      ------------------------------------------------------------
                                                                                  

consensus_8906#0      ACCTTCCCATCAGCACCGGCCGTGTAGAGTGTGTCCGGATTGTGGCTCGCGTTGAAGTAG 1618
consensus_8906#1      ACTTTT------GCGGGGGACTTGTAAATAACATGTGGATTTTGAAACCCCACAAAACAG 667
consensus_8906#2      ------------------------------------------------------------
                                                                                  

consensus_8906#0      ATTGCCGTGATGGGTGCCGTATGGCCGTCGCCCTTGCACGACCGCGGGATGCTGGCCGTC 1678
consensus_8906#1      CGTCTCCTG--------------------------------------------------- 676
consensus_8906#2      ------------------------------------------------------------
                                                                                  

consensus_8906#0      TTGGCTGGAGCATCGCCCCCGACCTGAAACCAGGCAAAGCTGGTGCACGGCACGTTCAGG 1738
consensus_8906#1      ------------------------------------------------------------
consensus_8906#2      ------------------------------------------------------------
                                                                                  

consensus_8906#0      TGCATGTTCGGCGTGTACACCTGATGGATGTCGCTCGTTTCCACATCGTGCACGACGAAC 1798
consensus_8906#1      ------------------------------------------------------------
consensus_8906#2      ------------------------------------------------------------
                                                                                  

consensus_8906#0      TTGCCCTGCTGGCTGATGTAGGCGCAGTACTTGCCGCAGGGCGAAAACTCTGCGCGATAT 1858
consensus_8906#1      ------------------------------------------------------------
consensus_8906#2      ------------------------------------------------------------
                                                                                  

consensus_8906#0      GCTAAACATTGTCCGTGTGTATGATGGTTTTTAATTCACTTTTGCGGGGGACTTGTAAAT 1918
consensus_8906#1      ------------------------------------------------------------
consensus_8906#2      ------------------------------------------------------------
                                                                                  

consensus_8906#0      AACATGTGGATTTTGAAATCCCACAAAACAGCGCGG 1954
consensus_8906#1      ------------------------------------
consensus_8906#2      ------------------------------------