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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8911#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1368 fasta sequence
[GGCAGAATCGCCCCCGAGGTTTNGCTCGCGCTCGAGTTTCTGCTAAGGTGTTCGTCACCTACAAGGCAGTGAAAAGGGCGTGCAATGCGCCTTTGGTGGCGTGCGATTGCTGCAAGAGCGGTCTCGACAACCGCCTGCCTGGAGTTTCTTGCCCTTGAACAAGCTGCAACTGAGGACTACCTCAATGACTGTGTGCTCGTCGAGAANGGATCTTNGCCTGACATCTTCAAGCCCTACACTAACAAATTGAAAATTCAAGTGACGCTAAGTCCCAAGTGCTAAATGGCTGNAAAGANCCGTAAGGTANACCTTGTGACTGCCAGGCTTGGCCTAAGGNTATAGACTCGCACTAACTATAAAACCTGAGTAGCACCCGAGAGGGTAAGCTAAGAANGTGTTAAAAACGGGGACACGTTANCTTCTAATTCACGGNCGCCAGAGAACCGATCGGGACGAATGCGGCGACATCAANGTTGAGTTCCACGGTAAACGGGAACANAACAAAGATTCCGGTTAGAAGCGAAATTTNTGCTCCAGCCGGTGAGAAAAGGGAAGCCCTAACTTAGGCGCNAATCAACGTCGCCTTTCTATAGGACGTTNCATAGAGAGGNGCTTTTACCAGATTTACCACAAANATTAGTTTAGTTGGACGGGGAGACTTAGCCCACCAGTAATAGACAGCCCGGGTCGCATTTACAACCACACTCTTGGGGCTTACCCAGGGGGCACAGATTAGAAAAGGGGCACCCGCCGCGGCGTAAACAAACGCTTTTGGGCGGTCTCGAAACTTAAATGGCCCCGCAAAAGCAACTGGNGGCCGAAACCAAACAGCCAATCGCGGTCAACAGAGGACCAGGGGTCACACAGACAAGCCTTTTTATGGGNNGGAGAGCTTTTNAAACCCCTTAAGACACCTGAGGCTCAGGGGCNCGAAAATGGCGCACCCCGCAAAAGGGCGATGGGGTGGTGACCCGAAAGACAAGACCCANGGGNTGGNAANCCAAAGGATCAGGCGCCTGAAAGTTTTAACCCTNTTGNGNGGACNAACCGNGGCGTAGCACCCGATAAAGAGCACCGGCCCCCGGNTTTTTTAAAAAAGCGCCAAAAAAAGANCCCATGGGTAAGANTACCCCNCCGCNGTAAGAAGTAGACGCCGANGTTATCTGGGGCANCGATTTTCAGACTTTCATCCCCCGTAGGTGCGTAGCAAAACCGCAACGACGCTGGNTAGCANCACCACAGGGGGACCGACTTTTTAGTNGGTACCGCGGAAAATGGCCGCTATCCCCTAAAAATGCACGTTNGCCCGCGATAAAGCACCAGCTGTGTGGNTGGTGGGGGACAAATAGCCTGCCCCCCAGTGGGAGT]
[+] EMBL AL934792 [GGCAGAATCGCCCCCGAGGTTTNGCTCGCGCTCGAGTTTCTGCTAAGGTGTTCGTCACCTACAAGGCAGTGAAAAGGGCGTGCAATGCGCCTTTGGTGGCGTGCGATTGCTGCAAGAGCGGTCTCGACAACCGCCTGCCTGGAGTTTCTTGCCCTTGAACAAGCTGCAACTGAGGACTACCTCAATGACTGTGTGCTCGTCGAGAANGGATCTTNGCCTGACATCTTCAAGCCCTACACTAACAAATTGAAAATTCAAGTGACGCTAAGTCCCAAGTGCTAAATGGCTGNAAAGANCCGTAAGGTANACCTTGTGACTGCCAGGCTTGGCCTAAGGNTATAGACTCGCACTAACTATAAAACCTGAGTAGCACCCGAGAGGGTAAGCTAAGAANGTGTTAAAAACGGGGACACGTTANCTTCTAATTCACGGNCGCCAGAGAACCGATCGGGACGAATGCGGCGACATCAANGTTGAGTTCCACGGTAAACGGGAACANAACAAAGATTCCGGTTAGAAGCGAAATTTNTGCTCCAGCCGGTGAGAAAAGGGAAGCCCTAACTTAGGCGCNAATCAACGTCGCCTTTCTATAGGACGTTNCATAGAGAGGNGCTTTTACCAGATTTACCACAAANATTAGTTTAGTTGGACGGGGAGACTTAGCCCACCAGTAATAGACAGCCCGGGTCGCATTTACAACCACACTCTTGGGGCTTACCCAGGGGGCACAGATTAGAAAAGGGGCACCCGCCGCGGCGTAAACAAACGCTTTTGGGCGGTCTCGAAACTTAAATGGCCCCGCAAAAGCAACTGGNGGCCGAAACCAAACAGCCAATCGCGGTCAACAGAGGACCAGGGGTCACACAGACAAGCCTTTTTATGGGNNGGAGAGCTTTTNAAACCCCTTAAGACACCTGAGGCTCAGGGGCNCGAAAATGGCGCACCCCGCAAAAGGGCGATGGGGTGGTGACCCGAAAGACAAGACCCANGGGNTGGNAANCCAAAGGATCAGGCGCCTGAAAGTTTTAACCCTNTTGNGNGGACNAACCGNGGCGTAGCACCCGATAAAGAGCACCGGCCCCCGGNTTTTTTAAAAAAGCGCCAAAAAAAGANCCCATGGGTAAGANTACCCCNCCGCNGTAAGAAGTAGACGCCGANGTTATCTGGGGCANCGATTTTCAGACTTTCATCCCCCGTAGGTGCGTAGCAAAACCGCAACGACGCTGGNTAGCANCACCACAGGGGGACCGACTTTTTAGTNGGTACCGCGGAAAATGGCCGCTATCCCCTAAAAATGCACGTTNGCCCGCGATAAAGCACCAGCTGTGTGGNTGGTGGGGGACAAATAGCCTGCCCCCCAGTGGGAGT]
consensusID : consensus_8911#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 918 fasta sequence
[AGTGAACACACATTTTGTGTATCATAAAAATTAACTTTTAAGCCCTTATAATGGGACGCGTTATTCGCGCGCAGCGTAAAGGTGCCGGATCAGTGTTCCGGGCACACACCAAGAAGCGAAAGGGACAGCCCAAGCTGCGCCATCTCGACTATGCCGAACGTCACGGTTACCTGAAGGGTGTCGTCAAGCAAATCATCCAGGACCCAGGCCGTGGTGCCCCGCTGGCGGTCGTAAACTTCCGCGACCCCTACCGCTTCCGCCTGAGCAAGCAGCTGTTCATTGCCGCCGAAGGTATGTACACCGGCCAGTTCGTGTACTGCGGTCGTCGGGCCCAGCTGCAGATCGGTAACGTGATCCCGATCGGTCTGATGCCGGAAGGTACGATTGTGTGCAACCTGGAGGAGAAGACCGGTGACCGTGGCAAGCTGGCGCGTACGTCCGGCAACTACGCCTCGGTCATTGCGCACAACCCGGACACGAAGCGCACCCGCGTGAAGCTGCCGTCCGGTGCGAAGAAGGTGCTGCCGTCGGCTAACCGTGCGATGGTCGGTATCGTGGCCGGTGGCGGTCGTATCGACAAGCCCATCCTGAAGGCCGGTCGTGCGTACCACAAGTACAAGGTGAAGCGTAACTGCTGGCCGAAGGTGCGTGGTGTGGCGATGAACCCCGTCGAGCATCCGCACGGTGGTGGTAACCATCAGCACATCGGTAAGGCGTCGACGGTCAAGCGTGGAACGCCTCCGGGTCGCAAGGTCGGTCTCATCGCTGCCCGTCGTACCGGTCGTATCCGTGGTGGCAAGGGCGACGAGAAGTTCAAGGAGAAGGAGAAGAAGTAAGCGGAGTAGTGAGTGCTCTGTTTATGTTCTGGTCCCTGTTCTGCGCGTTTTGGGGTGTTAGCGAGCTGAAGTGGTCCTATCG]
[+] EMBL AF164152 [AGTGAACACACATTTTGTGTATCATAAAAATTAACTTTTAAGCCCTTATAATGGGACGCGTTATTCGCGCGCAGCGTAAAGGTGCCGGATCAGTGTTCCGGGCACACACCAAGAAGCGAAAGGGACAGCCCAAGCTGCGCCATCTCGACTATGCCGAACGTCACGGTTACCTGAAGGGTGTCGTCAAGCAAATCATCCAGGACCCAGGCCGTGGTGCCCCGCTGGCGGTCGTAAACTTCCGCGACCCCTACCGCTTCCGCCTGAGCAAGCAGCTGTTCATTGCCGCCGAAGGTATGTACACCGGCCAGTTCGTGTACTGCGGTCGTCGGGCCCAGCTGCAGATCGGTAACGTGATCCCGATCGGTCTGATGCCGGAAGGTACGATTGTGTGCAACCTGGAGGAGAAGACCGGTGACCGTGGCAAGCTGGCGCGTACGTCCGGCAACTACGCCTCGGTCATTGCGCACAACCCGGACACGAAGCGCACCCGCGTGAAGCTGCCGTCCGGTGCGAAGAAGGTGCTGCCGTCGGCTAACCGTGCGATGGTCGGTATCGTGGCCGGTGGCGGTCGTATCGACAAGCCCATCCTGAAGGCCGGTCGTGCGTACCACAAGTACAAGGTGAAGCGTAACTGCTGGCCGAAGGTGCGTGGTGTGGCGATGAACCCCGTCGAGCATCCGCACGGTGGTGGTAACCATCAGCACATCGGTAAGGCGTCGACGGTCAAGCGTGGAACGCCTCCGGGTCGCAAGGTCGGTCTCATCGCTGCCCGTCGTACCGGTCGTATCCGTGGTGGCAAGGGCGACGAGAAGTTCAAGGAGAAGGAGAAGAAGTAAGCGGAGTAGTGAGTGCTCTGTTTATGTTCTGGTCCCTGTTCTGCGCGTTTTGGGGTGTTAGCGAGCTGAAGTGGTCCTATCG]
consensusID : consensus_8911#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 747 fasta sequence
[CCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCG------GTCGAGCTAAGTTCTCGCAATCAAAATGGCATTTGCATTGATAGTCCTTATCGGAGTGTTCAGTCTCCAGGGCAGCCTTGGAACGGGCAGTGCCGAGAACAAGCTAGGATTGAAACTGGTGGTGAAAACCAGTGCAGAGGACACCCAACCCCAAAATTACTACCGAGATTCCGCCTCATATGGGTCGCGCTTTGCCGATTCAAGTTCTTTCGCCCCAGAATTCTTCCGCACTGGATATGGCAATGTGCTCACGTCGCAAGCTGCTTTTGTGGAAGCAATCAACAACCGAAGCACCACCTGGAAAGCCGGAGTCAACCCGCAGCGCAACGATCAGTACCGCACAGGTGTGCTGTCGGATGAATCGATGAAGTTCCAACTGCCGCTGAGTTTCGTGCTGAAGAAGGATGAACAACCGCTGCCCATGTCGTTTGACGCACGCCAAAAGTGGTCGTACTGCCCGAGCATGAACATGGTACGC-AATCAGGGATGTTGCGACTCGAGCTACGCCGTAGCAGCAGTATCCACGATGACCGATCGCTGGTGCGTGCACTCGGAAGGCAAGGCGCAGTTCAACTTCGGAGCGTACGATGTGCTTTCCTGTTGCCATCGATGTGGATTCGGCTGTGACGGTGGTGTGCCGAGCGCCGTCTGGCACTACTGGGTCGAGAACGGTATTACCAGTGGGGGGAGCATTTG]
[+] EMBL BM590711 [CCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGGAAGCTGTCGAGCTAAGTTCTCGCAATCAAAATGGCATTTGCATTGATAGTCCTTATCGGAGTGTTCAGTCTCCAGGGCAGCCTTGGAACGGGCAGTGCCGAGAACAAGCTAGGATTGAAACTGGTGGTGAAAACCAGCGTAGAGGACACCCAACCCCAAAATTACTACCGTGATTCCGCCTCATATGGGTCGCGCTTTGCCGATTCAAGTTCTTTCGCCCCAGAATTCTTCCGCACTGGATATGGCAATGTGCTCACGTCGCAAGCTGCTTTTGTGGAAGCAATCAACAACCGAAGCACCACCTGGAAAGCCGGAGTCAACCCGCAGCGCAACGATCAGTACCGCACAGGCGTGCTGTCGGATGAATCGATGAAGTTCCAACTGCCGCTGGGTTTCGTGCTGAAGAAGGACGAACAACCGCTGCCCATGTCGTTTGACGCACGCCAAAAGTGGTCGTACTGCCCGAGCATGAACATGGTACGC AATCAGGGATGTTGCGACTCGAGCTACGCCGTAGCAGCAGTATCCACGATGACCGATCGCTGGTGCGTGCACTCGGAAGG ]
[+] EMBL BM593877 [ CCGCCCACGCGTCCG GTCGAGCTAAGTTCTCGCAATCAAAATGGCATTTGCATTGATAGTCCTTATCGGAGTGTTCAGTCTCCAGGGCAGCCTTGGAACGGGCAGTGCCGAGAACAAGCTAGGATTGAAACTGGTGGTGAAAACCAGTGCAGAGGACACCCAACCCCAAAATTACTACCGAGATTCCGCCTCATATGGGTCGCGCTTTGCCGATTCAAGTTCTTTCGCCCCAGAATTCTTCCGCACTGGATATGGCAATGTGCTCACGTCGCAAGCTGCTTTTGTGGAAGCAATCAACAACCGAAGCACCACCTGGAAAGCCGGAGTCAACCCGCAGCGCAACGATCAGTACCGCACAGGTGTGCTGTCGGATGAATCGATGAAGTTCCAACTGCCGCTGAGTTTCGTGCTGAAGAAGGATGAACAACCGCTGCCCATGTCGTTTGACGCACGCCAAAAGTGGTCGTACTGCCCGAGCATGAACATGGTACGC AATCAGGGATGTTGCGACTCGAGCTACGCCGTAGCAGCAGTATCCACGATGACCGATCGCTGGTGCGTGCACTCGGAAGGCAAGGCGCAGTTCAACTTCGGAGCGTACGATGTGCTTTCCTGTTGCCATCGATGTGGATTCGGCTGTGACGGTGGTGTGCCGAGCGCCGTCTGGCACTACTGGGTCGAGAACGGTATTACCAGTG ]
[+] EMBL BM578639 [ CCGCCCACGCGTCCG GTCGAGCTAAGTTCTCGCAATCAAAATGGCATTTGCATTGATAGTCCTTATCGGAGTGTTCAGTCTCCAGGGCAGCCTTGGAACGGGCAGTGCCTAGAACAAGCTAGGATTGAAACTGGTGGTGAAAACCAGTGCAGAGGACACCCAACCCCAAAATTACTACCGAGATTCCGCCTCATATGGGTCGCGCTTTGCCGATTCAAGTTCTTTCGCCCCAGAATTCTTCCGCACTGGATATGGCAATGTGCTCACGTCGCAAGCTGCTTTTGTGGAAGCAATCAACAACCGAAGCACCACCTGGAAAGCCGGAGTCAACCCGCAGCGCAACGATCAGTACCGCACAGGTGTGCTGTCGGATGAATCGATGAAGTTCCAACTGCCGCTGAGTTTCGTGCTGAAGAAGGATGAACAACCGCTGCCCATGTCGTTTGACGCACGCCAAAAGTGGTCGTACTGCCCGAGCATGAACATGGTACGCAAATCAGGGATGTTGCGACTCGAGCTACGCCGTAGCAGCAGTATCCACGATGACCGATCGCTGGTGCGTGCACTCGGAAGGCAAGGCGCAGTTCAACTTCGGAGCGTACGATGTGCTTTCCTGTTGCCATCGATGTGGATTCGGCTGTGACGGTGGTGTGCCGAGCGCCGTCTGGCACTACTGGGTCGAGAACGGTATTACCAG ]
[+] EMBL BM581829 [ CCGCCCACGCGTCCG GTCGAGCTAAGTTCTCGCAATCAAAATGGCATTTGCATTGATAGTCCTTATCGGAGTGTTCAGTCTCCAGGGCAGCCTTGGAACGGGCAGTGCCGAGAACAAGCTAGGATTGAAACTGGTGGTGAAAACCAGTGCAGAGGACACCCAACCCCAAAATTACTACCGAGATTCCGCCTCATATGGGTCGCGCTTTGCCGATTCAAGTTCTTTCGCCCCAGAATTCTTCCGCACTGGATATGGCAATGTGCTCACGTCGCAAGCTGCTTTTGTGGAAGCAATCAACAACCGAAGCACCACCTGGAAAGCCGGAGTCAACCCGCAGCGCAACGATCAGTACCGCACAGGTGTGCTGTCGGATGAATCGATGAAGTTCCAACTGCCGCTGAGTTTCGTGCTGAAGAAGGATGAACAACCGCTGCCCATGTCGTTTGACGCACGCCAAAAGTGGTCGTACTGCCCGAGCATGAACATGGTACGC AATCAGGGATGTTGCGACTCGAGCTACGCCGTAGCAGCAGTATCCACGATGACCGATCGCTGGTGCGTGCACTCGGAAGGCAAGGCGCAGTTCAACTTCGGAGCGTACGATGTGCTTTCCTGTTGCCATCGATGTGGATTCGGCTGTGACGGTGGTGTGCCGAGCGCCGTCTGGCACTACTGGGTCGAGAACGGTA ]
[+] EMBL BM616323 [ CCGCCCACGCGTCCGT GTCGAGCTAAGTTCTCGCAATCAAAATGGCATTTGCATTGATAGTCCTTATCGGAGTGTTCAGTCTCCAGGGCAGCCTTGGAACGGGCAGTGCCGAGAACCAGCTAGGATTGAAACTGGTGGTGAAAACCAGTGTAGAGGACACCCAACCCCAAAATTACTACCGAGATTCCGCCTCATATGGGTCGCGCTTTGCCGATTCAAGTTCTTTCGCCCCAGAATTCTTCCGCACTGGATATGGCAATGTGCTCACGTCGCAAGCTGCTTTTGTGGAAGCAATCAACAACCGAAGCACCACCTGGAAAGCCGGAGTCAACCCGCAGCGCAACGATCAGTACCGCACAGGTGTGCTGTCGGATGAATCGATGAAGTTCCAACTGCCGCTGGGTTTCGTGCTGAAGAAGGACGAACAACCGCTGCCCATGTCGTTTGACGCACGCCAAAAGTGGTCGTACTGCCCGAGCATGAACATGGTACGC AATCAGGGATGTTGCGACTCGAGCTACGCCGTAGCAGCAGTATCCACGATGACCGATCGCTGGTGCGTGCACTCGGAAGGCAAGGCGCAGTTCAACTTCGGAGCGTACGATGTGCTTTCCTGTTGCCATCGATGTGGATTCGGCTGTGACGGTGGTGTGCCGAGCGCCGTCTGGCATTACTGGGTCGAGAACGGT ]
[+] EMBL BM580180 [ CCGCCCACGCGTCCG GTCGAGCTAAGTTCTCGCAATCAAAATGGCATTTGCATTGATAGTCCTTATCGGAGTGTTCAGTCTCCAGGGCAGCCTTGGAACGGGCAGTGCCGAGAACAAGCTAGGATTGAAACTGGTGGTGAAAACCAGTGCAGAGGACACCCAACCCCAAAATTACTACCGAGATTCCGCCTCATATGGGTCGCGCTTTGCCGATTCAAGTTCTTTCGCCCCAGAATTCTTCCGCACTGGATATGGCAATGTGCTCACGTCGCAAGCTGCTTTTGTGGAAGCAATCAACAACCGAAGCACCACCTGGAAAGCCGGAGTCAACCCGCAGCGCAACGATCAGTACCGCACAGGTGTGCTGTCGGATGAATCGATGAAGTTCCAACTGCCGCTGAGTTTCGTGCTGAAGAAGGATGAACAACCGCTGCCCATGTCGTTTGACGCACGCCAAAAGTGGTCGTACTGCCCGAGCATGAACATGGTACGC AATCAGGGATGTTGCGACTCGAGCTACGCCGTAGCAGCAGTATCCACGATGACCGATCGCTGGTGCGTGCACTCGGAAGGCAAGGCGCAGTTCAACTTCGGAGCGTACGATGTGCTTTCCTGTTGCCATCGATGTGGATTCGGCTGT ]
[+] EMBL BM613250 [ CCGCCCACGCGTCCG GTCGAGCTAAGTTCTCGCAATCAAAATGGCATTTGCATTGATAGTCCTTATCGGAGTGTTCAGTCTCCAGGGCAGCCTTGGAACGGGCAGTGCCGAGAACAAGCTAGGATTGAAACTGGTGGTGAAAACCAGCGTAGAGGACACCCAACCCCAAAATTACTACCGTGATTCCGCCTCATATGGGTCGCGCTTTGCCGATTCAAGTTCTTTCGCCCCAGAATTCTTCCGCACTGGATATGGCAATGTGCTCACGTCGCAAGCTGCTTTTGTGGAAGCAATCAACAACCGAAGCACCACCTGGAAAGCCGGAGTCAACCCGCAGCGCAACGATCAGTACCGCACAGGCGTGCTGTCGGATGAATCGATGAAGTTCCAACTGCCGCTGGGTTTCGTGCTGAAGAAGGACGAACAACCGCTGCCCATGTCGTTTGACGCACGCCAAAAGTGGTCGTACTGCCCGAGCATGAACATGGTACGC AATCAGGGATGTTGCGACTCGAGCTACGCCGTAGCAGCAGTATCCACGATGACCGATCGCTGGTGCGTGCACTCGGAAGGCAAGGCGCAGTTCAACTTCGGAGCGTACGATGTGCTTTCCTGTTGCCATCGATGTGGATTCGGCTGTGACGGTGGTGTACCGAGCGCCGTCTGGCACTACTGGGTCGAGAACGGTATTACCAGTGGGGGGAGCATTTG]
[+] EMBL BM608541 [ CCGCCCACGCGTCCGT GTCGAGCTAAGTTCTCGCAATCAAAATGGCATTTGCATTGATAGTCCTTATCGGAGTGTTCAGTCTCCAGGGCAGCCTTGGAACGGGCAGTGCCGAGAACAAGCTAGGATTGAAACTGGTGGTGAAAACCAGTGCAGAGGACACCCAACCCCAAAATTACTACCGAGATTCCGCCTCATATGGGTCGCGCTTTGCCGATTCAAGTTCTTTCGCCCCAGAATTCTTCCGCACTGGATATGGCAATGTGCTCACGTCGCAAGCTGCTTTTGTGGAAGCAATCAACAACCGAAGCACCACCTGGAAAGCCGGAGTCAACCCGCAGCGCAACGATCAGTACCGCACAGGTGTGCTGTCGGATGAATCGATGAAGTTCCAACTGCCGCTGAGTTTCGTGCTGAAGAAGGATGAACAACCGCTGCCCATGTCGTTTGACGCACGCCAAAAGTGGTCGTACTGCCCGAGCATGAACATGGTACGC AATCAGGGATGTTGCGACTCGAGCTACGCCGTAGCAGCAGTATCCACGATGACCGATCGCTGGTGCGTGCACTCGGAAGGCAAGGCGCAGTTCAACTTCGGA ]
[+] EMBL BM583075 [ CCGCGGACGCGTGGG GTCGAGCTAAGTTCTCGCAATCAAAATGGCATTTGCATTGATAGTCCTTATCGGAGTGTTCAGTCTCCAGGGCAGCCTTGGAACGGGCAGTGCCGAGAACAAGCTAGGATTGAAACTGGTGGTGAAAACCAGCGTAGAGGACACCCAACCCCAAAATTACTACCGTGATTCCGCCTCATATGGGTCGCGCTTTGCCGATTCAAGTTCTTTCGCCCCAGAATTCTTCCGCACTGGATATGGCAATGTGCTCACGTCGCAAGCTGCTTTTGTGGAAGCAATCA ]
consensusID : consensus_8911#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 693 fasta sequence
[CCGCTCCGGCTACTTTTCTAAACCGGGGTTTATGAAACCTTCTTTGCTCAAAGGATAGTTGTTGTCCCGTTTGCTTAGCGGCGATGACCTTCACTGCGTCTACCGCGCAGTTCTTCGGGAGGGGTTCGTAAAAGCAAAACCTAACCTATTAGTAGAGTACACTAGTTACGTTTCAGCAGTCGATGCGGTTGTGATGATTTAGTAAAAGAGAAGCAAAAGCGAACAGAGCAGTTGTGTTGTTGTTTGATTTAGGTTTATAATTTGTGTAAGAAGAAGAGAGAAAAAAAACACAGCAAACAAAATTGAGTCGTGATTAAGGATTGTTAAGGAAACAGAAAACGCTTGCGCTTTTCGAAGGGAATTGGTGGTTTTCAGCTGTCGAAATTAGGAGTCGAAAATAATTGCGCGGAGCTGATTCGCGTGTGCGATGATAGTATTGTTGATTATATTTGATTAAAAAAACAAGGGTTAAGCCAAAAAGCGTGCTTAGGATTGCAACAAACGTTTGCAATGTTGTTTTGAAGAAAGCAAAAAAAAGGTGACCCATTGAAACAGGTTAGTGAGTTTAGAACGAGGGAACGTTTTCGGTCCCCGCCCCACAAAAATGGGTCCGCATTGTATTAATTACCGCACCCCGCATTGGGTGGACATTTGCATTGCTCCAAACGGTTTGTTTGACCGGGTGCGCTTTTC]
[+] EMBL BM622596 [CCGCTCCGGCTACTTTTCTAAACCGGGGTTTATGAAACCTTCTTTGCTCAAAGGATAGTTGTTGTCCCGTTTGCTTAGCGGCGATGACCTTCACTGCGTCTACCGCGCAGTTCTTCGGGAGGGGTTCGTAAAAGCAAAACCTAACCTATTAGTAGAGTACACTAGTTACGTTTCAGCAGTCGATGCGGTTGTGATGATTTAGTAAAAGAGAAGCAAAAGCGAACAGAGCAGTTGTGTTGTTGTTTGATTTAGGTTTATAATTTGTGTAAGAAGAAGAGAGAAAAAAAACACAGCAAACAAAATTGAGTCGTGATTAAGGATTGTTAAGGAAACAGAAAACGCTTGCGCTTTTCGAAGGGAATTGGTGGTTTTCAGCTGTCGAAATTAGGAGTCGAAAATAATTGCGCGGAGCTGATTCGCGTGTGCGATGATAGTATTGTTGATTATATTTGATTAAAAAAACAAGGGTTAAGCCAAAAAGCGTGCTTAGGATTGCAACAAACGTTTGCAATGTTGTTTTGAAGAAAGCAAAAAAAAGGTGACCCATTGAAACAGGTTAGTGAGTTTAGAACGAGGGAACGTTTTCGGTCCCCGCCCCACAAAAATGGGTCCGCATTGTATTAATTACCGCACCCCGCATTGGGTGGACATTTGCATTGCTCCAAACGGTTTGTTTGACCGGGTGCGCTTTTC]
consensusID : consensus_8911#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 193 fasta sequence
[CCGCCCACGCGTCCGCCCACGCGTCCGCTTTGCTCTCGTGCTATGCGTCGGTCTGGCCGTAGGGGCCGAGGTTGATAGTGTACCGGAAGTGCCATCGGACCTGCAGCAGCAACTGGACGAGCTGCAGCTGGCCGATAAACCAGAAGCTCCTGTGGATGACGCCGAACAACCTCTTCCCCCAAGTGGCGATGAA]
[+] EMBL BM625203 [CCGCCCACGCGTCCGCCCACGCGTCCGCTTTGCTCTCGTGCTATGCGTCGGTCTGGCCGTAGGGGCCGAGGTTGATAGTGTACCGGAAGTGCCATCGGACCTGCAGCAGCAACTGGACGAGCTGCAGCTGGCCGATAAACCAGAAGCTCCTGTGGATGACGCCGAACAACCTCTTCCCCCAAGTGGCGATGAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_8911#0 GGCAGAATCGCCCCCGA-GGTTTNG-CTCGCGCTCGAGTTTCTGCTAAGGTGTTCGTC-- 56
consensus_8911#4 -------CCGCCCACGC-GTCCGCC-CACGCGTCCGCTTTGCTCTCGTGCTATGCGTC-- 49
consensus_8911#2 -------CCGCCCACGC-GTCCGCC-CACGCGTCCGCCCACGCGTCCGCCCACGCGTCCG 51
consensus_8911#3 -------CCGCTCCGGCTACTTTTC-TAAACCGGGGTTTATGAAACCTTCTTTGCTCAAA 52
consensus_8911#1 --AGTGAACACACATTTTGTGTATCATAAAAATTAACTTTTAAGCCCTTATAATGGGACG 58
* * *
consensus_8911#0 ----ACCTACAAGGCAGTGAAAAGGGCGTGCAATGCGCCTTTGGTGGC-GTGCGA----- 106
consensus_8911#4 ----GGTCTGGCCGTAGGGGCCGAGGTTGATAGTGTACCGGAAGTGCC-ATCGGA----- 99
consensus_8911#2 GTCGAGCTAAGTTCTCGCAATCAAAATGGCATTTGCATTGATAGTCCTTATCGGAGTGTT 111
consensus_8911#3 GGATAGTTGTTGTCCCGTTTGCTTAGCGGCGATGACCTTCACTGCGTCTACCGCG----- 107
consensus_8911#1 CGTTATTCGCGCGCAGCGTAAAGGTGCCGGATCAGTGTTCCGGGCACACACCAAGAAGCG 118
*
consensus_8911#0 TTGCTGCAAGAGCGGTCTCGACAA---CCGCCTGCCTGGAGTTTCTTGCCCT-TGAACAA 162
consensus_8911#4 C--CTGCAGCAGCAA-CTGGACGA---G-------CTGCAG---CTGGCCGA-TAAACCA 142
consensus_8911#2 CAGTCTCCAGGGCAGCCTTGGAAC---GGGCAGTGCCGAGA--ACAAGCTAG-GATTGAA 165
consensus_8911#3 CAGTTCTTCGGGAGGGGTTCGTAA---AAGCAAAACCTAACCTATTAGTAGAGTACACTA 164
consensus_8911#1 AAAGGGACAGCCCAAGCTGCGCCATCTCGACTATGCCGAACGTCACGGTTACCTGAAGGG 178
* * *
consensus_8911#0 GCT--GCAACTGAGGACTACCTCA--ATGACTGTGTGCTCGTCGAGAANGGATCTTNGCC 218
consensus_8911#4 GAA--GCTCCTGTGGATGACGCCG--AACAACCTCTTCCC-CCAAGTGGCGATGAA---- 193
consensus_8911#2 ACT--GGTGGTGAAAACCAGTGCA--GAGGACACCCAACCCCAAAATTACTACCGAGATT 221
consensus_8911#3 GTTACGTTTCAGCAGTCGATGCGGTTGTGATGATTTAGTAAAAGAGAAGCAAAAGCGAAC 224
consensus_8911#1 TGT--CGTCAAGCAAATCATCCAGGACCCAGGCCGTGGTGCCCCGCTGGCGGTCGTAAAC 236
* *
consensus_8911#0 T----GACATCTTCAAGCCCTACACTAACAAATTGAAAATTCAAGTGACGCTAAGTCCCA 274
consensus_8911#4 ------------------------------------------------------------
consensus_8911#2 C----CGCCTCATATGGGTCGCGCTTTGCCGATTCAAGTTCTTTCGCCCCAGAATTCTTC 277
consensus_8911#3 A----GAGCAGTTGTGTTGTTGTTTGATTTAGGTTTATAATTTGTGTAAGAAGAAGAGAG 280
consensus_8911#1 TTCCGCGACCCCTACCGCTTCCGCCTGAGCAAGCAGCTGTTCATTGCCGCCGAAGGTATG 296
consensus_8911#0 AGTGCTAAATGGCTGNAAAGANCCGTAAGGTANACCTTGTGACTGCCAGGCTTGGCCTAA 334
consensus_8911#4 ------------------------------------------------------------
consensus_8911#2 CGCACTGGATATGGCAATGTGCTCACGTCGCAAGCTGCTTTTGTGGAAGCAATCAACAAC 337
consensus_8911#3 AAAAAAAACACAGCAAACAAAATTGAGTCGTGATTAAGGATTGTTAAGGAAACAGAAAAC 340
consensus_8911#1 TACACCGGCCAGTTCGTGTACTGCGGTCGTCGGGCCCAGCTGCAGATCGGTAACGTGATC 356
consensus_8911#0 GGNTATAGACTCGCACTAACTATAAAACCTGAGTAGCACCCGAGAGGGTAAGCTAAGAAN 394
consensus_8911#4 ------------------------------------------------------------
consensus_8911#2 CGAAGCACCACCTGGAAAGCCGGAGTCAACCCGCAGCGCAACGATCAGTACCGCACAGGT 397
consensus_8911#3 GCTTGCGCTTTTCGAAGGGAATTGGTGGTTTTCAGCTGTCGAAATTAGGAGTCGAAAATA 400
consensus_8911#1 CCGATCGGTCTGATGCCGGAAGGTACGATTGTGTGCAACCTGGAGGAGAAGACC--GGTG 414
consensus_8911#0 GTGTTAAAAACGGGGACACGTTANCTTCTAATTC-ACGGNCGCCAGAGAACCGATCGGGA 453
consensus_8911#4 ------------------------------------------------------------
consensus_8911#2 GTGCTGTCGG-ATGAATCGATGAAGTTCCAACTG-CCGCTGAGTTTCGTGCTGAAGAAGG 455
consensus_8911#3 ATTGCGCGGAGCTGATTCGCGTGTGCGATGA-TA-GTATTGTTGATTATATTTGATTAAA 458
consensus_8911#1 ACCGTGGCAAGCTGGCGCGTACGTCCGGCAACTACGCCTCGGTCATTGCGCACAACCCGG 474
consensus_8911#0 CGAATGCGGCGACATCAANGTTGAGTTCCACGGTAAACGGGAACANAACAAAGATTCCGG 513
consensus_8911#4 ------------------------------------------------------------
consensus_8911#2 ATGAACAACCGCTGCCCATGTCG---TTTGACGCACGCCAAAAGTGGTCGTACTGCCCGA 512
consensus_8911#3 AAAACAAGGGTTAAGCCAAAAAGCGTGCTTAGGATTGCAACAAACGTTTGCAATGTTGTT 518
consensus_8911#1 ACACGAAGCGCACCCGCGTGAAGCTGCCGTCCGGTGCGAAGAAGGTGCTGCCGTCGGCTA 534
consensus_8911#0 TTAGAAGCGAAATTTNTGCTCCAGCCGGTGAGAAAAGGGAAGCCCTAACTTAGGCGCNAA 573
consensus_8911#4 ------------------------------------------------------------
consensus_8911#2 GCATGAACATGGTACGCAATCAGGGATGTTGCGACTCGAGCTACGCCGTAGCAGCAGTAT 572
consensus_8911#3 TTGAAGAAAGCAAAAAAAAGGTGACCCATTGAAAC---AGGTTAGTGAGTTTAGAACGAG 575
consensus_8911#1 ACCGTGCGATGGTCGGTATCGTGGCCGGTGGCGGTC--GTATCGACAAGCCCATCCTGAA 592
consensus_8911#0 TCAACGTCGCCTTTCTATAGGACGTTNCATAGAGAGGNGCTTTTACCAGATTTACCACAA 633
consensus_8911#4 ------------------------------------------------------------
consensus_8911#2 CCACGATGACCGATCGCTGGTGCGTGCACTCGGAAGGCAAGGCGCAGTTCAACTTCGGAG 632
consensus_8911#3 GGAACGTTTTCGGTCCCCGCCCCACAAAAATGGGTCCGCATTGTATTAATTACCGCACCC 635
consensus_8911#1 GGCCGGTCGTGCGTACCACAAGTACAAGGTGAAGCGTAACTGCTGGCCGAAGGTGCGTGG 652
consensus_8911#0 ANATTAGTTTAGTTGGACGGGGAGACTTAGCCCACCAGTAATAGACAGCCCGGGTCGCAT 693
consensus_8911#4 ------------------------------------------------------------
consensus_8911#2 CGTACGATGTGCTTTCCTGTTGCCATCGATGTGGATTCGGCTGTGACGGTGGTGTGCCGA 692
consensus_8911#3 CGCATTGGGTGGACATTTGCATTGCTCCAAACGGTTTGTTTGACCGGGTGCGCTTTTC-- 693
consensus_8911#1 TGTGGCG-ATGAACCCCGTCGAGCATCCGCACGGTGGTGGTAACCATCAGCACATCGGTA 711
consensus_8911#0 TTACAACCACACTCTTGGGGCTTACCCAGGGGGCACAGATTAGAAAAGGGGCACCCGCCG 753
consensus_8911#4 ------------------------------------------------------------
consensus_8911#2 GCGCCGTCTGGCACTACTGGGTCGAGAACGGTATTACCAGTGGGGGGAGCATTTG----- 747
consensus_8911#3 ------------------------------------------------------------
consensus_8911#1 AGGCGTCGACGGTCAAGCGTGGAACGCCTCCGGGTCGCAAGGTCGGTCTCATCGCTGCCC 771
consensus_8911#0 CGGCGTAAACAAACGCTTTTGGGCGGTCTCGAAACTTAAATGGCCCCGCAAAAGCAACTG 813
consensus_8911#4 ------------------------------------------------------------
consensus_8911#2 ------------------------------------------------------------
consensus_8911#3 ------------------------------------------------------------
consensus_8911#1 GTCGTACCGGTCGTATCCGTGGTGGCAAGGGCGACGAGAAGTTCAAGGAGAAGGAGAAGA 831
consensus_8911#0 GNGGCCGAAACCAAACAGCCAATCGCGGTCAACAGAGGACCAGGGGTCACACAGACAAGC 873
consensus_8911#4 ------------------------------------------------------------
consensus_8911#2 ------------------------------------------------------------
consensus_8911#3 ------------------------------------------------------------
consensus_8911#1 AGTAAGCGGAGTAGTGAGTGCTCTGTTTATGTTCTGGTCCCTGTTCTGCGCGTTTTGGGG 891
consensus_8911#0 CTTTTTATGGGNNGGAGAGCTTTTNAAACCCCTTAAGACACCTGAGGCTCAGGGGCNCGA 933
consensus_8911#4 ------------------------------------------------------------
consensus_8911#2 ------------------------------------------------------------
consensus_8911#3 ------------------------------------------------------------
consensus_8911#1 TGTTAGCGAGCTGAAGTGGTCCTATCG--------------------------------- 918
consensus_8911#0 AAATGGCGCACCCCGCAAAAGGGCGATGGGGTGGTGACCCGAAAGACAAGACCCANGGGN 993
consensus_8911#4 ------------------------------------------------------------
consensus_8911#2 ------------------------------------------------------------
consensus_8911#3 ------------------------------------------------------------
consensus_8911#1 ------------------------------------------------------------
consensus_8911#0 TGGNAANCCAAAGGATCAGGCGCCTGAAAGTTTTAACCCTNTTGNGNGGACNAACCGNGG 1053
consensus_8911#4 ------------------------------------------------------------
consensus_8911#2 ------------------------------------------------------------
consensus_8911#3 ------------------------------------------------------------
consensus_8911#1 ------------------------------------------------------------
consensus_8911#0 CGTAGCACCCGATAAAGAGCACCGGCCCCCGGNTTTTTTAAAAAAGCGCCAAAAAAAGAN 1113
consensus_8911#4 ------------------------------------------------------------
consensus_8911#2 ------------------------------------------------------------
consensus_8911#3 ------------------------------------------------------------
consensus_8911#1 ------------------------------------------------------------
consensus_8911#0 CCCATGGGTAAGANTACCCCNCCGCNGTAAGAAGTAGACGCCGANGTTATCTGGGGCANC 1173
consensus_8911#4 ------------------------------------------------------------
consensus_8911#2 ------------------------------------------------------------
consensus_8911#3 ------------------------------------------------------------
consensus_8911#1 ------------------------------------------------------------
consensus_8911#0 GATTTTCAGACTTTCATCCCCCGTAGGTGCGTAGCAAAACCGCAACGACGCTGGNTAGCA 1233
consensus_8911#4 ------------------------------------------------------------
consensus_8911#2 ------------------------------------------------------------
consensus_8911#3 ------------------------------------------------------------
consensus_8911#1 ------------------------------------------------------------
consensus_8911#0 NCACCACAGGGGGACCGACTTTTTAGTNGGTACCGCGGAAAATGGCCGCTATCCCCTAAA 1293
consensus_8911#4 ------------------------------------------------------------
consensus_8911#2 ------------------------------------------------------------
consensus_8911#3 ------------------------------------------------------------
consensus_8911#1 ------------------------------------------------------------
consensus_8911#0 AATGCACGTTNGCCCGCGATAAAGCACCAGCTGTGTGGNTGGTGGGGGACAAATAGCCTG 1353
consensus_8911#4 ------------------------------------------------------------
consensus_8911#2 ------------------------------------------------------------
consensus_8911#3 ------------------------------------------------------------
consensus_8911#1 ------------------------------------------------------------
consensus_8911#0 CCCCCCAGTGGGAGT 1368
consensus_8911#4 ---------------
consensus_8911#2 ---------------
consensus_8911#3 ---------------
consensus_8911#1 ---------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||