cluster # 8929

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Anopheles gambiae
cluster # 8929 cluster # 8929 Sequences # 13 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8929#0 length = 1646 sequences # 10

consensus_8929#1 length = 607 sequences # 2
consensus_8929#2 length = 245 sequences # 1

consensusID : consensus_8929#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 1646
fasta sequence

                              [CCGCCCACGCGTCCGACAGAAAGTGTTCGGAACTTCCAAAATTTTGGAACCAAATATCAACATTCCCGGCCCGTTTCAAGATTTCCAAACTTCCTCTAATCTATATCGCACGCACCATGAACCGAAACAACGAAGTGTCTGAGCTGATCGATGTAGAGAACGCATTCTACATCGGCAACTACCAGACGTGCATCAATGAGTGTAACAAAATATCCAAAGCCTCACTGGAGAAGGACATCTTCATGTACCGGTCGTACATCGCGCAGCACAAGTACCGCGTGGTGCTGGACGAGATCAAACCGTCAAACGACACGCCACTCCTTGCCCTGCGCTACCTGGCCGAGTACATGTCCAACAGCGCGCGGAAGGAAGCCATCGTGTCGATCTTTGATGAAAAATTCCAGGGCGACATCAACGAGCTGCACGTTGTGTGGATTATCGTCGGCGCTATCATTTACTGCAACGAGGAAACCTACGAAACGGCTATGAAGGTTCTGGTGGGAAACTTCAACCTAGAGTGTCTGTCCCTGCACATGCACTGTCTGCTGAAAATGTCCCGTGTAGATCTAGCGAAGCAGGTCGCAACCA-CGATGCAGGAAAAGGACGACGATGCCACCCTTACCCAGCTGTCCCAAGCATGGCTGAACATTCAAATCGGCGGTGAAAAGCTGCAGGATGCCTTCTTCATCTTCCAAGATCTGTGCGACAAGTTTTCGCCCACGCTGCTGCTGCTGAACGGGCAGGCCGTGTGCTACATCGGCCAGCAGAAGTACGACGATGCGGAGCA-GG-TGCTGCGCGAATGCTTAAACCGCGACCCGAACAACTACGACACGCTGATCAATCTGCTCGCCCTGTCCCAGCAGCGGGACAAAAGCAGCAGCCAGTTCAGCCGCTACCTGGCCCAGATACTGGACGACCACAAGGGAAGCAGCCT-GGTGGCGGCGTACAACAAGCGGCAGGCCGAGTTCGACCGTCTCGTGCTACAGTTTGGTCCGTCGAACAGCAAACCGATCGACGAGATAGTTGCGTAAGGTAGTGAAAGTGTGCTCTCCCCTGTGTGCTGCGTATGTTTAAATGTATTCCATAAACTTTTTAATTGCAAAATAGTTTTGCCTCTTCAACAAATAACACTGTCTGGGTTCTCACACAAACGTAGCAGCATTCTGACTAGGATTCTCTTGCGAGAAATCAAACACAAACACACTTAGGAAGCCATTTTTAGCATCTCTTCCCGCTGTTGCTGCAATCGATCAAGCTAGAGGAAAACAGAAAGGAAAAGAATCTGTGTTAAACTTACATTCCTCGGCCACCTTCCACTTACAAACGCACCTTTTCCTGATGCCGTTTCTGTACACTTTCGCTGGCCGACCGTTTATACCCTTCGTTTCCAATAGTCTTCAGCAGCTTCTCAATCTCTGCATCCAATTTCGCCAGCATCTTTCGGCTTGCCTCGGCACCGGCACCATTTGCGCCTCCGCCCGACTCGGCCACAATTCCAATTAAACAGTCATGCGTTGGGGCACCCTTCACTACGTACTGCACGTTGCCGAACAACCGTTCGTCCGAATGCAGTACGACTCCGTTGCAGTGCGTTAGCTGCTGTATTGTGTCGCGCAGCACGTGCAACTCGGCGGCAAGCTTGGGCG]

[+] EMBL BM628051             [CCGCCCACGCGTCCGACAGAAAGTGTTCGGAACTTCCAAAATTTTGGAACCAAATATCAACATTCCAGGCCCGTTTCAAGATTTCCAAACTTCCTCTAATCTATATCGCACGCACCATGAACCGAAACAACGAAGTGTCTGAGCTGATCGATGTAGAGAACGCATTCTACATCGGCAACTACCAGACGTGCATCAATGAGTGTAACAAAATATCCAAAGCCTCACTGGAGAAGGACATCTTCATGTACCGGTCGTACATCGCGCAGCACAAGTACCGCGTGGTGCTGGACGAGATCAAACCGTCAAACGACACGCCACTCCTTGCCCTGCGCTACCTGGCCGAGTACATGTCCAACAGCGCGCGGAAGGAAGCGATCGTGTCGATCTTTGATGAAAAATTCCAGGGCGACATCAACGAGCTGCACGTGGTGTGGATTATCGTCGGCGCAATCATTTACTGTAACGAGGAAACCTACGAAACGGCTATGAAGGTTCTGGTGGGAAACTTCAACCTAGAGTGTCCGTCCCTGCACATGCACTGTCTGCTGAAAATGTCCCGTGTAGATCTAGCGAAGCAGGTCGCAACCA CGATGCAGGAAAAGGACGACGATGCCACCCTTACGCAGCTGTCCCAGGCATGGCTAAACATTCAAATCGGCGGTGAAAAGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CNS08JI0             [                gAGAAAGTGTTCGGAACTTCCAAAATTTTGGAACCAAATATCAACATTCCCGGCCCGTCTCAAGATTTCCAAACTTCCTCTAATCTATATCGCACGCACCATGAACCGAAACAACGAAGTTTCTGAGCTGATCGATGTAGAGAACGCATTCTACATCGGCAACTACCAGACGTGCATCAATGAGTGTAACAAAATATCCAAAGCCTCACTGGAGAAGGACATCTTCATGTACCGGTCGTACATCGCGCA CACAAGTACCGCGTGGTGCTGGACGAGATCAAACCGTCAAACGACACGCCACTCCTTGCCCTGCGCTACCTGGCCGAGTACATGTCCAACAGCGCGCGGAAGGAAGCCATCGTGTCGATCTTTGATGAAAAACTCCAGGGCGACATCAACGAGCTGCACGTTGTGTGGATTATCGTCGGCGCTATCATTTACTGCAACGAGGAAACCTACGAAACGGCTATGAAGGTTCTGGTGGGAAACTTCAACCTAGAGTGTCTGTCCCTGCACATGCACTGTCTGCTGAAAATGTCCCGTGTAGATCTAGCGAAG AGGTCGCAACCA CGATGCAGGAAAAGGACGACGATGCCACCCTTACCCAGCTGTCCCAAGCATGGCTGAACATTCAAATCGGCGGTGAAAAGCTGCAGGATGCCTTCTTCATCTTCCAAGATCTGTGCGACAAGTTTTCGCCCACGCTGCTGCTGCTGAACGGGCAGGCCGTGTGCTACATCGGCCAGCAGAAGTACGACGATGCGGA CA GGTTGCTGCGCGAATTCTTAAACCGCGACCCGAACAACTACGACACGCTGATCAATCTGCTCGCCCTGTCCCAGCAGCGGGACAAAAGCAGCAGCCAGTTCAGCCGCTACCTGGCCCAGATACTGGACGACCACAAGGGAAGCAGCTT GGTGGCGGCGTACAACAAGCGGCAGGCCGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CNS08XY9             [                                   CCAAAATTTTGGAACCAAATATCAACATTCCCGGCCCGTTTCAAGATTTCCAAACTTCCTCTAATCTATATCGCACGCACCATGAACCGAAACAACGAAGTGTCTGAGCTGATCGATGTAGAGAACGCATTCTACATCGGCAACTACCAGACGTGCATCAATGAGTGTAACAAAATATCCAAAGCCTCACTGGAGAAGGACATCTTCATGTACCGGTCGTACATCGCGCAG ACAAGTACCGCGTGGTGCTGGACGAGATCAAACCGTCAAACGACACGCCACTCCTTGCCCTGCGCTACCTGGCCGAGTACATGTCCAACAGCGCGCGGAAGGAAGCCATCGTGTCGATCTTTGATGAAAAATTCCAGGGCGACATCAACGAGCTGCACGTTGTGTGGATTATCGTCGGCGCTATCATTTACTGCAACGAGGAAACCTACGAAACGGCTATGAAGGTTCTGGTGGGAAACTTCAACCTAGAGTGTCTGTCCCTGCACATGCACTGTCCGCTGAAAATGTCCCGTGTAGATCTAGCGAAG AGGTCGCAACCA CGATGCAGGAAAAGGACGACGATGCCACCCTTACCCAGCTGTCCCAAGCATGGCTGAACATTCAAATCGGCGGTGAAAAGCTGCAGGATGCCTTCTTCATCTTCCAAGATCTGTGCGACAAGTTTTCGCCCACGCTGCTGCTGCTGAACGGGCAGGCCGTGTGCTACATCGGCCAGCAGAAGTACGACGATGCGGA CAGGG TGCTGCGCGAATGCTTAAACCGCGACCCGAACAACTACGACACGCTGATCAATCTGCTCGCCCTGTCCCAGCAGCGGGACAAAAGCAGCAGCCAGTTCAGCCGCTACCTGGCCCAGATACTGGACGACCACAAGGGAAGCAGCCTGGGTGGCGGCGTACA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CNS08NZS             [                                     AAAATTTTGGAACCAAATATCAACATTCCCGGCCCGTTTCAAGATTTCCAAACTTCCTCTAATCTATATCGCACGCACCATGAACCGAAACAACGAA TTTCTGAGCTGATCGATGTAGAGAACGCATTCTACATCGGCAACTACCAGACGTGCATCAATGAGTGTAACAAAATATCCAAAGCCTCACTGGAGAAGGACATCTTCATGTACCGGTCGTACATCGCGCAG ACAAGTACCGCGTGGTGCTGGACGAGATCAAACCGTCAAACGACACGCCACTCCTTGCCCTGCGCTACCTGGCCGAGTACATGTCCAACAGCGCGCGGAAGGAAGCCATCGTGTCGATCTTTGATGAAAAATTCCAGGGCGACATCAACGAGCTGCACGTTGTGTGGATTATCGTCGGCGCTACCATTTACTGCAACGAGGAAACCTACGAAACGGCTATGAAGGTTCTGGTGGGAAACTTCAACCTAGAGTGTCTGTCCCTGCACATGCACTGTCTGCTGAAAATGTCCCGTGTAGATCTAGCGAAGAGGGTCGCAACCA CGATGCAGGAAAAGGACGACGATGCCACCCTTACCCAGCTGTCCCAAGCATGGCTGAACATTCAAATCGGCGGTGAAAAGCTGCAGGATGCCTTCTTCATCTTCCAAGATCTGTGCGACAAGTTTTCGCCCACGCTGCTGCTGCTGAACGGGCAGGCCGTGTGCTACATCGGCCAGCAGAAGTACGACGATGCGGA CA GG TGCaaaaa                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CNS08XYA             [                                                                                                                                                                                                  AATGAGTGTAACAAAATATCCAAAGCCTAACTGGAGAAGGACATCTTCATGTACCGGTCGTACATCGCGCAGAACAAGTACCGCGTGGTGCTGGACGAGATCAAACCGTCAAACGACACGCCACTCCTTGCCCTGCGCTACCTGGCCGAGTACATGTCCAACAGCGCGCGGAAGGAAGCCATCGTGTCGATCTTTGATGAAAAATTCCAGGGCGACATCAACGAGCTGCACGTTGTGTGGATTATCAACGGCGCTATCATTTACTGCAACGAGGAAACCTACGAAACGGCTATGAAGGTTCTGGTGGGAAACTTCAACCTAGAGTGTCTGTCCCTGCACATGCACTGTCCGCTGAAAATGTCCCGTGTAGATCTAGCGAAGCAGGTCGCAACCA CGATGCAGGAAAAGGACGACGATGCCACCCTTACCCAGCTGTCCCAAGCATGGCTGAACATTCAAATCGGCGGTGAAAAGCTGCAGGATGCCTTCTTCATCTTCCAAGATCTGTGCGACAAGTTTTCGCCCACGCTGCTGCTGCTGAACGGGCAGGCCGTGTGCTACATCGGCCAGCAGAAGTACGACGATGCGGAGCA GG TG TGCGCGAATGCTTAAACCGCGACCCGAACAACTACGACACGCTGATCAATCTGCTCGCCCTGTCCCAGCAGCGGGACAAAAGCAGCAGCCAGTTCAGCCGCTACCTGGCCCAGATACTGGACGACCACAAGGGAAGCAGCCT GGTGGCGGCGTACAACAAGCGGCAGGCCGAGTTCGACCGTCTCGTGCTACAGTTTGGTCCGTCGAACAGCAAACCGATCGACGAGATAGTTGCGTAAGGTAGTGAAAGTGTGCTCTCCCCTGTGTGCTGCGTATGTTTAAATGTATTCCATAAACTTTTTAATTGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CNS08JI1             [                                                                                                                                                                                                                                                                           ACAATTACCGCGTGGTGCTGGACGAGATCAAACCGTCAAACAAAACGCAACTCCTTGCCCTGCGCTACCTGGCCGAGTACATGTCCAACAGCGCGCGGAAGGAAGCCATCGTGTCGATCTTTGATGAAAAATTCCAGGGCCACATCAACGAGCTGCACGTTTTGTGGATTATCGTCGGCGCTATCATTAACTGCAACGAGGAAACCTACGAAACGGCTATGAAGGTTCTGGTGGGAAACTTCAACCTAGAGTTTCTGTCCCTGAACATGAACTTTCTGCTGAAAATGTCCCGTGTAGTTCTAGCGAAGCAGGTCGCAACCACCGATGCAGGAAAAGGACGACGATGCCACCCTTACCCAGCTGTCCCAAGCATGGCTGAACATTCAAATCGGCGGTGAAAAGCTGCAGGATGCCTTCTTCATCTTCCAAGATCTGTGCGACAAGTTTTCGCCCACGCTGCTGCTGCTGAACGGGCAGGCCGTGTGCTACATCGGCCAGCAGAAGTACGACGATGCGGAGCA GG TG TGCGCGAATGCTTAAACCGCGACCCGAACAACTACGACACGCTGATCAATCTGCTCGCCCTGTCCCAGCAGCGGGACAAAAGCAGCAGCCAGTTCAGCCGCTACCTGGCCCAGATACTGGACGACCACAAGGGAAGCAGCCT GGTGGCGGCGTACAACAAGCGGCAGGCCGAGTTCGACCGTCTCGTGCTACAGTTTGGTCCGTCGAACAGCAAACCGATCGACGAGATAGTTGCGTAAGGTAGTGAAAGTGTGCTCTCCCCTTTGTGCTGCGTATGTTTAAATGTATTCCATAAACTTTTTAATTGCAAAATAGTTTTGCCTCTTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL CNS08NZT             [                                                                                                                                                                                                                                                                                                                                                                                                                CCAGGGCGACATCAACGAGCTGCACGTTGTGTGGATTATCGTCGGCGCTACCATTTACTGCAACGAGGAAACCTACGAAACGGCTATGAAGGTTCTGGTGGGAAACTTCAACCTAGAGTGTCTGTCCCTGCACATGCACTTTCTGCTGAAAATGTCCCGTGTAGATCTAGCGAAGCAGGTCGCAACCA CGATGCAGGAAAAGGACGACGATGCCACCCTTACCCAGCTGTCCCAAGCATGGCTGAACATTCAAATCGGCGGTGAAAAGCTGCAGGATGCCTTCTTCATCTTCCAAGATCTGTGCGACAAGTTTTCGCCCACGCTGCTGCTGCTGAACGGGCAGGCCGTGTGCTACATCGGCCAGCAGAAGTACGACGATGCGGAGCAGGG TG TGCGCGAATGCTTAAACCGCGACCCGAACAACTACGACACGCTGATCAATCTGCTCGCCCTGTCCCAGCAGCGGGACAAAAGCAGCAGCCAGTTCAGCCGCTACCTGGCCCAGATACTGGACGACCACAAGGGAAGCAGCCT GGTGGCGGCGTACAACAAGCGGCAGGCCGAGTTCGACCGTCTCGTGCTACAGTTTGGTCCGTCGAACAGCAAACCGATCGACGAGATAGTTGCGTAAGGTAGTGAAAGTGTGCTCTCCCCTGTGTGCTGCGTATGTTTAAATGTATTCCATAAACTTTTTAATTGCAAAATAGTTTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL BM641897             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ccgCCCAAGCATGGCTGAACATTCAAATCGGCGGTGAAAAGCTGCAGGATGCCTTCTTCATCTTCCAAGATCTGTGCGACAAGTTTTCGCCCACGCTGCTGCTGCTGAACGGGCAGGCCGTGTGCTACATCGGCCAGCAGAAGTACGACGATGCGGAGCA GG TGCTGCGCGAATGCTTAAACCGCGACCCGAACAACTACGACACGCTGATCAATCTGCTCGCCCTGTCCCAGCATCGGGACAAAAGCAGCAGCCAGTTCAGCCGCTACCTGGCCCAGATACTGGACGACCACAAAGGAAGCAGCCT GGTGGCGGCGTACAACAAGCGGCAGGCCGAGTTCGATCGCCTTGTTCTACAGTTTGGTCCGTCGAACAGCAAACCGATCGACGAGATAGTTGCGTAAGGTAGTGAAAGTGTGCTCTCCCGTGTGTGCTGCGTATGTTTAAATGTATTCCATAAACTTTTAAATTGCAAAATAGTTTTGCCTCTTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL BM650221             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ccgCAGCAAACCAATCGACGAGATAGTTGCGTAAGGTAGTGAAAGTGTGCTCTCCCCTGTGTGCTGCGTATGTTTAAATGTATTCCATAAACTTTTTAATTGCAAAATAGTTCTGCCTCTTCAACAAATAACACTGTCTGGGTTCTCACACAAACGTAGCAGCATTCTGACTAGGATTCTCTTGCGAGAAATCAAACACAAACACACTTAGGAAGCCATTTTTAGCATCTCTTCCCGCTGTTGCTGCAATCGATCAAGCTAGAGGAAAACAGAAAGGAAAAGAATCTGTGTTAAACTTACATTCCTCGGCCACCTTCCACTTACAAACGCACCTTTTCCTGATGCCGTTTCTGTACACTTTCGCTGGCCGACCGTTTATACCCTTCGTTTCCAATAGTCTTCAGCAGCTTCTCAATCTCTGCATCCAATTTCGCCAGCATCTTTCGGCTTGCCTCGGCACCGGCACCATTTGCGCCTCCGCCCGACTCGGCCACAATTCCAATTAAACAGTCATGCGTTGGGGCACCCTTCACTACGTACTGCACGTTGCCGAACAACCGTTCGTCCGAATGCAGTACGACTCCGTTGCAGTGCGTTAGCTGCTGTATTGTGTCGCGCAGCACGTGCA                     ]
[+] EMBL BX618490             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TAGTCTTCAGCAGCTTCTCAATCTCTGCATCCAATTTCGCCAGCATCTTTCGGCTTGCCTCGGCACCGGCACCATTTGCGCCTCCGCCCGACTCGGCCACAATTCCAATTAAACAGTCATGCGTTGGGGCACCCTTCACTACGTACTGCACGTTGCCGAACAACCGTTCGTCCGAATGCAGTACGACTCCGTTGCAGTGCGTTAGCTGCTGTATTGTGTCGCGCAGCACGTGCAACTCGGCGGCAAGCTTGGGCG]




>consensus_8929#0
CCGCCCACGCGTCCGACAGAAAGTGTTCGGAACTTCCAAAATTTTGGAACCAAATATCAA
CATTCCCGGCCCGTTTCAAGATTTCCAAACTTCCTCTAATCTATATCGCACGCACCATGA
ACCGAAACAACGAAGTGTCTGAGCTGATCGATGTAGAGAACGCATTCTACATCGGCAACT
ACCAGACGTGCATCAATGAGTGTAACAAAATATCCAAAGCCTCACTGGAGAAGGACATCT
TCATGTACCGGTCGTACATCGCGCAGCACAAGTACCGCGTGGTGCTGGACGAGATCAAAC
CGTCAAACGACACGCCACTCCTTGCCCTGCGCTACCTGGCCGAGTACATGTCCAACAGCG
CGCGGAAGGAAGCCATCGTGTCGATCTTTGATGAAAAATTCCAGGGCGACATCAACGAGC
TGCACGTTGTGTGGATTATCGTCGGCGCTATCATTTACTGCAACGAGGAAACCTACGAAA
CGGCTATGAAGGTTCTGGTGGGAAACTTCAACCTAGAGTGTCTGTCCCTGCACATGCACT
GTCTGCTGAAAATGTCCCGTGTAGATCTAGCGAAGCAGGTCGCAACCACGATGCAGGAAA
AGGACGACGATGCCACCCTTACCCAGCTGTCCCAAGCATGGCTGAACATTCAAATCGGCG
GTGAAAAGCTGCAGGATGCCTTCTTCATCTTCCAAGATCTGTGCGACAAGTTTTCGCCCA
CGCTGCTGCTGCTGAACGGGCAGGCCGTGTGCTACATCGGCCAGCAGAAGTACGACGATG
CGGAGCAGGTGCTGCGCGAATGCTTAAACCGCGACCCGAACAACTACGACACGCTGATCA
ATCTGCTCGCCCTGTCCCAGCAGCGGGACAAAAGCAGCAGCCAGTTCAGCCGCTACCTGG
CCCAGATACTGGACGACCACAAGGGAAGCAGCCTGGTGGCGGCGTACAACAAGCGGCAGG
CCGAGTTCGACCGTCTCGTGCTACAGTTTGGTCCGTCGAACAGCAAACCGATCGACGAGA
TAGTTGCGTAAGGTAGTGAAAGTGTGCTCTCCCCTGTGTGCTGCGTATGTTTAAATGTAT
TCCATAAACTTTTTAATTGCAAAATAGTTTTGCCTCTTCAACAAATAACACTGTCTGGGT
TCTCACACAAACGTAGCAGCATTCTGACTAGGATTCTCTTGCGAGAAATCAAACACAAAC
ACACTTAGGAAGCCATTTTTAGCATCTCTTCCCGCTGTTGCTGCAATCGATCAAGCTAGA
GGAAAACAGAAAGGAAAAGAATCTGTGTTAAACTTACATTCCTCGGCCACCTTCCACTTA
CAAACGCACCTTTTCCTGATGCCGTTTCTGTACACTTTCGCTGGCCGACCGTTTATACCC
TTCGTTTCCAATAGTCTTCAGCAGCTTCTCAATCTCTGCATCCAATTTCGCCAGCATCTT
TCGGCTTGCCTCGGCACCGGCACCATTTGCGCCTCCGCCCGACTCGGCCACAATTCCAAT
TAAACAGTCATGCGTTGGGGCACCCTTCACTACGTACTGCACGTTGCCGAACAACCGTTC
GTCCGAATGCAGTACGACTCCGTTGCAGTGCGTTAGCTGCTGTATTGTGTCGCGCAGCAC
GTGCAACTCGGCGGCAAGCTTGGGCG

consensusID : consensus_8929#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 607
fasta sequence

                              [CGACCCACGCGTCCGGAACTTCCAAAATTTTGGAACCAAATATCAACATTCCAGGCCCGTTTCAAGATTTCCAAACTTCCTCTAATCTATATCGCACGCACCATGAACCGAAACAACGAAGTGTCTGAGCTGATCGATGTAGAGAACGCATTCTACATCGGCAACTACCAGACGTGCATCAATGAGTGTAACAAAATATCCAAAGCCTCACTGGAGAAGGACATCTTCATGTACCGGTCGTACATCGCGCAGCACAAGTACCGCGTGGTGCTGGACGAGATCAAACCGTCAAACGACACGCCACTCCTTGCCCTGCGCTACCTGGCCGAGTACATGTCCAACAGCGCGCGGAAGGAAGCGATCGTGTCGATCTTTGATGAAAAATTCCAGGGCGACATCAACGAGCTGCACGTGGTGTGGATTATCGTCGGCGCAATCATTTACTGTAACGAGGAAACCTACGAAACGGCTATGAAGGTTCTGGTGGGAAACTTCAACCTA-AGTGTCCGTCCCTGCACATGCACTGTCTGCTGAAATGTCCCGTGTAGATCTAGCGAAGCAGGTCGCAACCACGATGCAGGAAAAAGGACGACGATGCCACCCTTAC]

[+] EMBL BM634466             [CGACCCACGCGTCCGGAACTTCCAAAATTTTGGAACCAAATATCAACATTCCAGGCCCGTTTCAAGATTTCCAAACTTCCTCTAATCTATATCGCACGCACCATGAACCGAAACAACGAAGTGTCTGAGCTGATCGATGTAGAGAACGCATTCTACATCGGCAACTACCAGACGTGCATCAATGAGTGTAACAAAATATCCAAAGCCTCACTGGAGAAGGACATCTTCATGTACCGGTCGTACATCGCGCAGCACAAGTACCGCGTGGTGCTGGACGAGATCAAACCGTCAAACGACACGCCACTCCTTGCCCTGCGCTACCTGGCCGAGTACATGTCCAACAGCGCGCGGAAGGAAGCGATCGTGTCGATCTTTGATGAAAAATTCCAGGGCGACATCAACGAGCTGCACGTGGTGTGGATTATCGTCGGCGCAATCATTTACTGTAACGAGGAAACCTACGAAACGGCTATGAAGGTTCTGGTGGGAAACTTCAACCTA AGTGTCCGTCCCTGCACATGCACTGTCTGCTGAAATGTCCCGTGTAGATCTAGCGAAGCAGGTCGCAACCACGATGCAGGAAAAAGGACGACGATGCCACCCTTAC]
[+] EMBL BX621014             [                        AAATTTTGGAACCAAATATCAACATTCCAGGCCCGTTTCAAGATTTCCAAACTTCCTCTAATCTATATCGCACGCACCATGAACCGAAACAACGAAGTGTCTGAGCTGATCGATGTAGAGAACGCATTCTACATCGGCAACTACCAGACGTGCATCAATGAGTGTAACAAAATATCCAAAGCCTCACTGGAGAAGGACATCTTCATGTACCGGTCGTACATCGCGCAGCACAAGTACCGCGTGGTGCTGGACGAGATCAAACCGTCAAACGACACGCCACTCCTTGCCCTGCGCTACCTGGCCGAGTACATGTCCAACAGCGCGCGGAAGGAAGCGATCGTGTCGATCTTTGATGAAAAATTCCAGGGCGACATCAACGAGCTGCACGTGGTGTGGATTATCGTCGGCGCAATCATTTACTGTAACGAGGAAACCTACGAAACGGCTATGAAGGTTCTGGTGGGAAACTTCAACCTAGAGTGTCCGTCCCTGCACATGCACTGTCTGCTGAAA                                                                       ]




>consensus_8929#1
CGACCCACGCGTCCGGAACTTCCAAAATTTTGGAACCAAATATCAACATTCCAGGCCCGT
TTCAAGATTTCCAAACTTCCTCTAATCTATATCGCACGCACCATGAACCGAAACAACGAA
GTGTCTGAGCTGATCGATGTAGAGAACGCATTCTACATCGGCAACTACCAGACGTGCATC
AATGAGTGTAACAAAATATCCAAAGCCTCACTGGAGAAGGACATCTTCATGTACCGGTCG
TACATCGCGCAGCACAAGTACCGCGTGGTGCTGGACGAGATCAAACCGTCAAACGACACG
CCACTCCTTGCCCTGCGCTACCTGGCCGAGTACATGTCCAACAGCGCGCGGAAGGAAGCG
ATCGTGTCGATCTTTGATGAAAAATTCCAGGGCGACATCAACGAGCTGCACGTGGTGTGG
ATTATCGTCGGCGCAATCATTTACTGTAACGAGGAAACCTACGAAACGGCTATGAAGGTT
CTGGTGGGAAACTTCAACCTAAGTGTCCGTCCCTGCACATGCACTGTCTGCTGAAATGTC
CCGTGTAGATCTAGCGAAGCAGGTCGCAACCACGATGCAGGAAAAAGGACGACGATGCCA
CCCTTAC

consensusID : consensus_8929#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 245
fasta sequence

                              [AAGAATTCGGCGCACCATGAACCGAAACAACGAAGTGTCTGAGCTGATCGATGTAGAGAACGCATTCTACATCGGCAACTACCAGATGTGCATCAATGAGTGTAACAAAATATCCAAAGCCTCACTGGAGAAGGACATCTTCATGTACCGGTCGTACATCGCGCAGCACAAGTACCGCGTGGTGCTGGACGAGATCAAACCGTCAAACGACACGCCACTCCTTGCCCTGCGCTACCTGGCCGAGT]

[+] EMBL AGA285323            [AAGAATTCGGCGCACCATGAACCGAAACAACGAAGTGTCTGAGCTGATCGATGTAGAGAACGCATTCTACATCGGCAACTACCAGATGTGCATCAATGAGTGTAACAAAATATCCAAAGCCTCACTGGAGAAGGACATCTTCATGTACCGGTCGTACATCGCGCAGCACAAGTACCGCGTGGTGCTGGACGAGATCAAACCGTCAAACGACACGCCACTCCTTGCCCTGCGCTACCTGGCCGAGT]




>consensus_8929#2
AAGAATTCGGCGCACCATGAACCGAAACAACGAAGTGTCTGAGCTGATCGATGTAGAGAA
CGCATTCTACATCGGCAACTACCAGATGTGCATCAATGAGTGTAACAAAATATCCAAAGC
CTCACTGGAGAAGGACATCTTCATGTACCGGTCGTACATCGCGCAGCACAAGTACCGCGT
GGTGCTGGACGAGATCAAACCGTCAAACGACACGCCACTCCTTGCCCTGCGCTACCTGGC
CGAGT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8929#0      CCGCCCACGCGTCCGACAGAAAGTGTTCGGAACTTCCAAAATTTTGGAACCAAATATCAA 60
consensus_8929#1      -------------CGACCCAC-GCGTCCGGAACTTCCAAAATTTTGGAACCAAATATCAA 46
consensus_8929#2      ------------------------------------------------------------
                                                                                  

consensus_8929#0      CATTCCCGGCCCGTTTCAAGATTTCCAAACTTCCTCTAATCTATATCGCACGCACCATGA 120
consensus_8929#1      CATTCCAGGCCCGTTTCAAGATTTCCAAACTTCCTCTAATCTATATCGCACGCACCATGA 106
consensus_8929#2      ----------------------------------------AAGAATTCGGCGCACCATGA 20
                                                                  **    **********

consensus_8929#0      ACCGAAACAACGAAGTGTCTGAGCTGATCGATGTAGAGAACGCATTCTACATCGGCAACT 180
consensus_8929#1      ACCGAAACAACGAAGTGTCTGAGCTGATCGATGTAGAGAACGCATTCTACATCGGCAACT 166
consensus_8929#2      ACCGAAACAACGAAGTGTCTGAGCTGATCGATGTAGAGAACGCATTCTACATCGGCAACT 80
                      ************************************************************

consensus_8929#0      ACCAGACGTGCATCAATGAGTGTAACAAAATATCCAAAGCCTCACTGGAGAAGGACATCT 240
consensus_8929#1      ACCAGACGTGCATCAATGAGTGTAACAAAATATCCAAAGCCTCACTGGAGAAGGACATCT 226
consensus_8929#2      ACCAGATGTGCATCAATGAGTGTAACAAAATATCCAAAGCCTCACTGGAGAAGGACATCT 140
                      ****** *****************************************************

consensus_8929#0      TCATGTACCGGTCGTACATCGCGCAGCACAAGTACCGCGTGGTGCTGGACGAGATCAAAC 300
consensus_8929#1      TCATGTACCGGTCGTACATCGCGCAGCACAAGTACCGCGTGGTGCTGGACGAGATCAAAC 286
consensus_8929#2      TCATGTACCGGTCGTACATCGCGCAGCACAAGTACCGCGTGGTGCTGGACGAGATCAAAC 200
                      ************************************************************

consensus_8929#0      CGTCAAACGACACGCCACTCCTTGCCCTGCGCTACCTGGCCGAGTACATGTCCAACAGCG 360
consensus_8929#1      CGTCAAACGACACGCCACTCCTTGCCCTGCGCTACCTGGCCGAGTACATGTCCAACAGCG 346
consensus_8929#2      CGTCAAACGACACGCCACTCCTTGCCCTGCGCTACCTGGCCGAGT--------------- 245
                      *********************************************               

consensus_8929#0      CGCGGAAGGAAGCCATCGTGTCGATCTTTGATGAAAAATTCCAGGGCGACATCAACGAGC 420
consensus_8929#1      CGCGGAAGGAAGCGATCGTGTCGATCTTTGATGAAAAATTCCAGGGCGACATCAACGAGC 406
consensus_8929#2      ------------------------------------------------------------
                                                                                  

consensus_8929#0      TGCACGTTGTGTGGATTATCGTCGGCGCTATCATTTACTGCAACGAGGAAACCTACGAAA 480
consensus_8929#1      TGCACGTGGTGTGGATTATCGTCGGCGCAATCATTTACTGTAACGAGGAAACCTACGAAA 466
consensus_8929#2      ------------------------------------------------------------
                                                                                  

consensus_8929#0      CGGCTATGAAGGTTCTGGTGGGAAACTTCAACCTAGAGTGTCTGTCCCTGCACATGCACT 540
consensus_8929#1      CGGCTATGAAGGTTCTGGTGGGAAACTTCAACCTA-AGTGTCCGTCCCTGCACATGCACT 525
consensus_8929#2      ------------------------------------------------------------
                                                                                  

consensus_8929#0      GTCTGCTGAAAATGTCCCGTGTAGATCTAGCGAAGCAGGTCGCAACCACGATGCAGGAAA 600
consensus_8929#1      GTCTGCTGAAA-TGTCCCGTGTAGATCTAGCGAAGCAGGTCGCAACCACGATGCAGGAAA 584
consensus_8929#2      ------------------------------------------------------------
                                                                                  

consensus_8929#0      A-GGACGACGATGCCACCCTTACCCAGCTGTCCCAAGCATGGCTGAACATTCAAATCGGC 659
consensus_8929#1      AAGGACGACGATGCCACCCTTAC------------------------------------- 607
consensus_8929#2      ------------------------------------------------------------
                                                                                  

consensus_8929#0      GGTGAAAAGCTGCAGGATGCCTTCTTCATCTTCCAAGATCTGTGCGACAAGTTTTCGCCC 719
consensus_8929#1      ------------------------------------------------------------
consensus_8929#2      ------------------------------------------------------------
                                                                                  

consensus_8929#0      ACGCTGCTGCTGCTGAACGGGCAGGCCGTGTGCTACATCGGCCAGCAGAAGTACGACGAT 779
consensus_8929#1      ------------------------------------------------------------
consensus_8929#2      ------------------------------------------------------------
                                                                                  

consensus_8929#0      GCGGAGCAGGTGCTGCGCGAATGCTTAAACCGCGACCCGAACAACTACGACACGCTGATC 839
consensus_8929#1      ------------------------------------------------------------
consensus_8929#2      ------------------------------------------------------------
                                                                                  

consensus_8929#0      AATCTGCTCGCCCTGTCCCAGCAGCGGGACAAAAGCAGCAGCCAGTTCAGCCGCTACCTG 899
consensus_8929#1      ------------------------------------------------------------
consensus_8929#2      ------------------------------------------------------------
                                                                                  

consensus_8929#0      GCCCAGATACTGGACGACCACAAGGGAAGCAGCCTGGTGGCGGCGTACAACAAGCGGCAG 959
consensus_8929#1      ------------------------------------------------------------
consensus_8929#2      ------------------------------------------------------------
                                                                                  

consensus_8929#0      GCCGAGTTCGACCGTCTCGTGCTACAGTTTGGTCCGTCGAACAGCAAACCGATCGACGAG 1019
consensus_8929#1      ------------------------------------------------------------
consensus_8929#2      ------------------------------------------------------------
                                                                                  

consensus_8929#0      ATAGTTGCGTAAGGTAGTGAAAGTGTGCTCTCCCCTGTGTGCTGCGTATGTTTAAATGTA 1079
consensus_8929#1      ------------------------------------------------------------
consensus_8929#2      ------------------------------------------------------------
                                                                                  

consensus_8929#0      TTCCATAAACTTTTTAATTGCAAAATAGTTTTGCCTCTTCAACAAATAACACTGTCTGGG 1139
consensus_8929#1      ------------------------------------------------------------
consensus_8929#2      ------------------------------------------------------------
                                                                                  

consensus_8929#0      TTCTCACACAAACGTAGCAGCATTCTGACTAGGATTCTCTTGCGAGAAATCAAACACAAA 1199
consensus_8929#1      ------------------------------------------------------------
consensus_8929#2      ------------------------------------------------------------
                                                                                  

consensus_8929#0      CACACTTAGGAAGCCATTTTTAGCATCTCTTCCCGCTGTTGCTGCAATCGATCAAGCTAG 1259
consensus_8929#1      ------------------------------------------------------------
consensus_8929#2      ------------------------------------------------------------
                                                                                  

consensus_8929#0      AGGAAAACAGAAAGGAAAAGAATCTGTGTTAAACTTACATTCCTCGGCCACCTTCCACTT 1319
consensus_8929#1      ------------------------------------------------------------
consensus_8929#2      ------------------------------------------------------------
                                                                                  

consensus_8929#0      ACAAACGCACCTTTTCCTGATGCCGTTTCTGTACACTTTCGCTGGCCGACCGTTTATACC 1379
consensus_8929#1      ------------------------------------------------------------
consensus_8929#2      ------------------------------------------------------------
                                                                                  

consensus_8929#0      CTTCGTTTCCAATAGTCTTCAGCAGCTTCTCAATCTCTGCATCCAATTTCGCCAGCATCT 1439
consensus_8929#1      ------------------------------------------------------------
consensus_8929#2      ------------------------------------------------------------
                                                                                  

consensus_8929#0      TTCGGCTTGCCTCGGCACCGGCACCATTTGCGCCTCCGCCCGACTCGGCCACAATTCCAA 1499
consensus_8929#1      ------------------------------------------------------------
consensus_8929#2      ------------------------------------------------------------
                                                                                  

consensus_8929#0      TTAAACAGTCATGCGTTGGGGCACCCTTCACTACGTACTGCACGTTGCCGAACAACCGTT 1559
consensus_8929#1      ------------------------------------------------------------
consensus_8929#2      ------------------------------------------------------------
                                                                                  

consensus_8929#0      CGTCCGAATGCAGTACGACTCCGTTGCAGTGCGTTAGCTGCTGTATTGTGTCGCGCAGCA 1619
consensus_8929#1      ------------------------------------------------------------
consensus_8929#2      ------------------------------------------------------------
                                                                                  

consensus_8929#0      CGTGCAACTCGGCGGCAAGCTTGGGCG 1646
consensus_8929#1      ---------------------------
consensus_8929#2      ---------------------------