These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8944#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 1966 fasta sequence [CCGCCCACGCGTCCGCCCACGCGTCCGGTCGGTGTCCGCACAACATCGGATCCCAATTACACTCGATCTCACCCCGGTGCCCGAAGTCATCGCGTTAGGAGCGTTCCCCTGCTAAAGTGTGTTTCCGAAATGTCCGACAAAAAGCGACCTGTTTACGTGCAGTACGTCCTTGGAGGACTATCTGGCATCGGAGCGACATGTGTCGTGCAGCCGCTGGATCTGGTGAAAACGCGCATGCAAATCTCCGGCATGGGCGGTGCGGCCAAGGAGTACAACAACACGTTCGACGCGATCGGCAAGATCATGCGGCGTGAGGGCGTGCTGGCGATGTACAAGGGGCTGAGCGCCGCCATCATGCGACAGGCTACCTACACCACGACCCGCCTCGGTGTGTACACGTCGCTCAATGATGCCTACAAACAGAAAACCAACAAAACACCGAACCTGCTCGCCTCGATGGCCATGGGCATGACGGCCGGTGCGATCGGTTCCTTTGTCGGCAATCCGAGCGAGCTGATCCTGATCCGGAT-GACGGCCGACGGCCGCTTGCCAGTGGACGAGCGGCGCAACTACACCGGCTTCTTCAACGCTCTGTTCCGGATTGCCCGGG-AAGAAGGTGTCCTGTCGCTATGGCGCGGTTGCGTACCGACGATGGGCCGCGCGATGGTGGTAAATGCCGCCCAGCTCGCTTCCTACTCGCAAGCCAAGGCGTACCTGGTCAGCTCGCAGCTGCTCCAGGAAGGTATTGGACTGCACTTTACCGCCAGTATGTTCTCGGGACTGATCACGACGGCCGCCTCCCTACCAGTCGACATTGCCAAGACAAGAATTCAAAACATGAAGGTTGCGCCGGGTGAAGTGCCGCCATACAAGAGCACGGTCGACGTCATCGTGAAGGTAATCCGGCACGAGGGTCTGTTTGCGCTCTGGAAGGGCTTCACCGCCTACTACGGCCGGCTCGGCCCGCACACCGTGCTAACGTTCATCATTCTGGAGCAGCTGAACGGGCTGTACAACAAGCACATGGGCGTGGAGGGCAGCAAATCGGGCCTGTAAGCGGTCCGATCATCTTCCTTCCATCCATCCCTCCCTACCTCTTCCGTTAGCCACGTGTTCAATCCCTCTCGTGGCGAGAGAGAGCGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAGGGCGGCAGCGAACACGACAACGCCGGAAACGCACGCCGCTGCTGCTGTGCACGCATTTCTTTCGATGGCAATTTGTAAATGTTACTTTCCGTTTTTTATTTCCTGCTATGTAACTTTTTGTTGCTGTATCATCACCCTCAAACAACCCCAGAAATTGATAAAAAGCTGAGCTTAATAGATAGAGAGATAAAGAAGATGCCGTATTACTTCGGAATTGCCGGTAAAAAAGCACACAGATTTAAAGGAAAACAACCAGCCACAAATAACTGTTTCGAAACACACCTGTTTGGTTGCATGGCAACCTTCAAATGTTCAACATCGCACATCCCCCTACAACGCAACGGAGATTCGGTTTCGTTTGCAAAAAAAACGTTGGCAACCGTCCAAGCAAGCGCGGGATGGCGCCACGCTAGAGTAATGCCGCGACGCGTCTTTCAACTTTCCCTGCTTCGCCGGGCTGTGCTGCTGACCGACTGCCAGCCAGTCAGTCAGTCAGTTGTGAACTTGAGCCGGCAAATGATAGGATAGCAATTCGTAATGCAATATTAAATCGTAGGGTAGCAGCAGTAGCACAACGCTTTAAGCCGAGAAACACACACACTAGGAAGGAAACGAATTGTGACAATATAGTGCGGGAATAGTGTTTTTTTTATAGTAGC-AAGTGGAGCAGTTGCCACAACGTCCTGTATTCAGGAAACGTTCGCACCGTGAAGCAGCTGCAGCATCAGCAGGAGAATAACCGAA] [+] EMBL BM641801 [CCGCCCACGCGTCCGCCCACGCGTCCGGTCGGTGTCCGCACAACATCGGATCCCAATTACACTCGATCTCACCCCGGTGCCCGAAGTCATCGCGTTAGGAGCGTTCCCCTGCTAAAGTGTGTTTCCGAAATGTCCGACAAAAAGCGACCTGTTTACGTGCAGTACGTCCTTGGAGGACTATCTGGCATCGGAGCGACATGTGTCGTGCAGCCGCTGGATCTGGTGAAAACGCGCATGCAAATCTCCGGCATGGGCGGTGCGGCCAAGGAGTACAACAACACGTTCGACGCGATCGGCAAGATCATGCGGCGTGAGGGCGTGCTGGCGATGTACAAGGGGCTGAGCGCCGCCATCATGCGACAGGCTACCTACACCACGACCCGCCTCGGTGTGTACACGTCGCTCAATGATGCCTACAAACAGAAAACCAACAAAACACCGAACCTGCTCGCCTCGATGGCCATGGGCATGACGGCCGGTGCGATCGGTTCCTTTGTCGGCAATCCGAGCGAGCTGATCCTGATCCGGATGGACGGCCGACGGCCGCTTGCCAGTGGACGAGCGGCGCAACTACACCGGCTTCTTCAACGCTCTGTTCCGGATTGCCCGGG AAGAAAGTGTCCTGTCGCTATGGCGCGGTTGCGTACCGACGATGGGCCGCGCGATGGTGGTAAATGCCGCCCAGCTC ] [+] EMBL BM626945 [ CCGGTCGGTGTCCGCACAACATCGGATCCCAATTACACTCGATCTCACCCCGGTGCCCGAAGTCATCGCGTTAGGAGCGTTCCCCTGCTAAAGTGTGTTTCCGAAATGTCCGACAAAAAGCGACCTGTTTACGTGCAGTACGTCCTTGGAGGACTATCTGGCATCGGAGCGACATGTGTCGTGCAGCCGCTGGATCTGGTGAAAACGCGCATGCAAATCTCCGGCATGGGCGGTGCGGCCAAGGAGTACAACAACACGTTCGACGCGATCGGCAAGATCATGCGGCGTGAGGGCGTGCTGGCGATGTACAAGGGGCTGAGCGCCGCCATCATGCGACAGGCTACCTACACCACGACCCGCCTCGGTGTGTACACGTCGCTCAATGATGCCTACAAACAGAAAACCAACAAAACACCGAACCTGCTCGCCTCGATGGCCATGGGCATGACGGCCGGTGCGATCGGTTCCTTTGTCGGCAATCCGAGCGAGCTGATCCTGATCCGGAT GACGGCCGACGGCCGCTTGCCAGTGGACGAGCGGCGCAACTACACCGGCTTCTTCAACGCTCTGTTCCGGATTGCCCGGG AAGAAGGTGTCCTGTCGCTATGGCGCGGTTGCGTACCGACGATGGGCCGCGCGATGGTGGTAAATGCCGCCCAGCTCGCTTtc ] [+] EMBL BM579096 [ ccgGTCCGCACAACATCGGATCCCAATTACACTCGATCTCACCCCGGTGCCCGAAGTCATCGCGTTAGGAGCGTTCCCCTGCTAAAGTGTGTTTCCGAAATGTCCGACAAAAAGCGACCTGTTTACGTGCAGTACGTCCTTGGAGGACTATCTGGCATCGGAGCGACATGTGTCGTGCAGCCGCTGGATCTGGTGAAAACGCGCATGCAAATCTCCGGCATGGGCGGTGCGGCCAAGGAGTACAACAACACGTTCGACGCGATCGGCAAGATCATGCGGCGTGAGGGCGTGCTGGCGATGTACAAGGGGCTGAGCGCCGCCATCATGCGACAGGCTACCTACACCACGACCCGCCTCGGTGTGTACACGTCGCTCAATGATGCCTACAAACAGAAAACCAACAAAACACCGAACCTGCTCGCCTCGATGGCCATGGGCATGACGGCCGGTGCGATCGGTTCCTTTGTCGGCAATCCGAGCGAGCTGATCCTGATCCGGAT GACGGCCGACGGCCGCTTGCCAGTGGACGAGCGGCGCAACTACACCGGCTTCTTCAACGCTCTGTTCCGGATTGCCCGGGAAAGAAGGTGTCCTGTCGCTATGGCGCGGTTGCGTACCGACGATGGGCCGCGCGATGGTGGTAAATGCCGCCCAGCTCG ] [+] EMBL BM612319 [ ccgGCACAACATCGGATCCCAATTACACTCGATCTCACCCCGGTGCCCGAAGTCATCGCGTTAGGAGCGTTCCCCTGCTAAAGTGTGTTTCCGAAATGTCCGACAAAAAGCGACCTGTTTACGTGCAGTACGTCCTTGGAGGACTATCTGGCATCGGAGCGACATGTGTCGTGCAGCCGCTGGATCTGGTGAAAACGCGCATGCAAATCTCCGGCATGGGCGGTGCGGCCAAGGAGTACAACAACACGTTCGACGCGATCGGCAAGATCATGCGGCGTGAGGGCGTGCTGGCGATGTACAAGGGGCTGAGCGCCGCCATCATGCGACAGGCTACCTACACCACGACCCGCCTCGGTGTGTACACGTCGCTCAATGATGCCTACAAACAGAAAACCAACAAAACACCGAACCTGCTCGCCTCGATGGCCATGGGCATGACGGCCGGTGCGATCGGTTCCTTTGTCGGCAATCCGAGCGAGCTGATCCTGATCCGGAT GACGGCCGACGGCCGCTTGCCAGTGGACGAGCGGCGCAACTACACCGGCTTCTTCAACGCTCTGTTCCGGATTGCCCGGG A ] [+] EMBL BM640255 [ CCGCGATGGCCATGGGCATGACGGCCGGTGCGATCGGTTCCTTTGTCGGCAATCCGAGCGAGCTGATCCTGATCCGGAT GACGGCCGACGGCCGCTTGCCAGTGGACGAGCGGCGCAACTACACCGGCTTCTTCAACGCTCTGTTCCGGATTGCCCGGG AAGAAGGTGTCCTGTCGCTATGGCGCGGTTGCGTACCGACGATGGGCCGCGCGATGGTGGTAAATGCCGCCCAGCTCGCTTCCTACTCGCAAGCCAAGGCGTACCTGGTCAGCTCGCAGCTGCTCCAGGAAGGTATTGGACTGCACTTTACCGCCAGTATGTTCTCGGGACTGATCACGACGGCCGCCTCCCTACCAGTCGACATTGCCAAGACAAGAATTCAAAACATGAAGGTTGCGCCGGGTGAAGTGCCGCCATACAAGAGCACGGTCGACGTCATCGTGAAGGTAATCCGGCACGAGGGTCTGTTTGCGCTCTGGAAGGGCTTCACCGCCTACTACGGCCGGCTCGGCCCGCACACCGTGCTAACGTTCATCATTCTGGAGCAGCTGAACGGGCTGTACAACAAGCACATGGGCGTGGAGGGCAGCAAATCGGGCCTGTAAGCGGTCCGATCATCTTCCTTCCATCCATCCCTCCCTACCTCTTCCGTTAGCCACGTGTTCAATCCCTCTCGTGGCGAGAGAGAGCG ] [+] EMBL BM609470 [ ccgCGCTTCCTACTCGCAAGCCAAGGCGTACCTGGTCAGCTCGCAGCTGCTCCAGGAAGGTATTGGACTGCACTTTACCGCCAGTATGTTCTCGGGACTGATCACGACGGCCGCCTCCCTACCAGTCGACATTGCCAAGACAAGAATTCAAAACATGAAGGTTGCGCCGGGTGAAGTGCCGCCATACAAGAGCACGGTCGACGTCATCGTGAAGGTAATCCGGCACGAGGGTCTGTTTGCGCTCTGGAAGGGCTTCACCGCCTACTACGGCCGGCTCGGCCCGCACACCGTGCTAACGTTCATCATTCTGGAGCAGCTGAACGGGCTGTACAACAAGCACATGGGCGTGGAGGGCAGCAAATCGGGCCTGTAAGCGGTCCGATCATCTTCCTTCCATCCATCCCTCCCTACCTCTTCCGTTAGCCACGTGTTCAATCCCTCTCGTGGCGAGAGAGAGCGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAGGGCGGCAGCGAACACGACAACGCCGGAAACGCACGCCGCTGCTGCTGTGCACGCATTTCTTTCGATGGCAATTTGTAAATGTTACTTTCCGTTTTTTATTTCCTGCTATGTAACTTTTTGTTGCTGTATC ] [+] EMBL BM656163 [ ccgGCGAACACGACAACGCCGGAAACGCACGCCGCTGCTGCTGTGCACGCATTTCTTTCGATGGCAATTTGTAAATGTTACTTTCCGTTTTTTATTTCCTGCTATGTAACTTTTTGTTGCTGTATCATCACCCTCAAACAACCCCAGAAATTGATAAAAAGCTGAGCTTAATAGATAGAGAGATAAAGAAGATGCCGTATTACTTCGGAATTGCCGGTAAAAAAGCACACAGATTTAAAGGAAAACAACCAGCCACAAATAACTGTTTCGAAACACACCTGTTTGGTTGCATGGCAACCTTCAAATGTTCAACATCGCACATCCCCCTACAACGCAACGGAGATTCGGTTTCGTTTGCAAAAAAAACGTTGGCAACCGTCCAAGCAAGCGCGGGATGGCGCCACGCTAGAGTAATGCCGCGACGCGTCTTTCAACTTTCCCTGCTTCGCCGGGCTGTGCTGCTGACCGACTGCCAGCCAGTCAGTCAGTCAGTTGTGAACTTGAGCCGGCAAATGATAGGATAGCAATTCGTAATGCAATATTAAATCGTAGGGTAGCAGCAGTAGCACAACGCTTTAAGCCGAGAAACACACACACTAGGAAGGAAACGAATTGTGACAATATAGTGCGGGAATAGTGTTTTTTTTATAGTAGCAAAGTGGAGCAGTTGCCACAACGTCCTGTATTCAG ] [+] EMBL BX626893 [ CTGTGCACGCATTTCTTTCGATGGCAATTTGTAAATGTTACTTTCCGTTTTTTATTTCCTGCTATGTAACTTTTTGTTGCTGTATCATCACCCTCAAACAACCCCAGAAATTGATAAAAAGCTGAGCTTAATAGATAGAGAGATAAAGAAGATGCCGTATTACTTCGGAATTGCCGGTAAAAAAGCACACAGATTTAAAGGAAAACAACCAGCCACAAATAACTGTTTCGAAACACACCTGTTTGGTTGCATGGCAACCTTCAAATGTTCAACATCGCACATCCCCCTACAACGCAACGGAGATTCGGTTTCGTTTGCAAAAAAAACGTTGGCAACCGTCCAAGCAAGCGCGGGATGGCGCCACGCTAGAGTAATGCCGCGACGCGTCTTTCAACTTTCCCTGCTTCGCCGGGCTGTGCTGCTGACCGACTGCCAGCCAGTCAGTCAGTCAGTTGTGAACTTGAGCCGGCAAATGATAGGATAGCAATTCGTAATGCAATATTAAATCGTAGGGTAGCAGCAGTAGCACAACGCTTTAAGCCGAGAAACACACACACTAGGAAGGAAACGAATTGTGACNATATAGTGCGGGAATAGTGNTTTTTTTATAGTAGC AAGTGGAGCAGTTGCCACAACGTCCTGTATTCANGA ] [+] EMBL BM600982 [ CCGGAAATTGATAAAAAGCTGAGCTTAATAGATAGAGAGATAAAGAAGATGCCGTATTACTTCGGAATTGCCGGTAAAAAAGCACACAGATTTAAAGGAAAACAACCAGCCACAAATAACTGTTTCGAAACACACCTGTTTGGTTGCATGGCAACCTTCAAATGTTCAACATCGCACATCCCCCTACAACGCAACGGAGATTCGGTTTCGTTTGCAAAAAAAACGTTGGCAACCGTCCAAGCAAGCGCGGGATGGCGCCACGCTAGAGTAATGCCGCGACGCGTCTTTCAACTTTCCCTGCTTCGCCGGGCTGTGCTGCTGACCGACTGCCAGCCAGTCAGTCAGTCAGTTGTGAACTTGAGCCGGCAAATGATAGGATAGCAATTCGTAATGCAATATTAAATCGTAGGGTAGCAGCAGTAGCACAACGCTTTAAGCCGAGAAACACACACACTAGGAAGGAAACGAATTGTGACAATATAGTGCGGGAATAGTGTTTTTTTTATAGTAGC AAGTGGAGCAGTTGCCACAACGTCCTGTATTCAGGAAACGTTCGCACCGTGAAGCAGCTGCAGCATCAGCAGGAGAATAACCGAA] consensusID : consensus_8944#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 644 fasta sequence [CCGGCCCTTTTCGCCAGGAAAACCAACAAAACACCGAACCTGCTCGCCTCGATGGCCATGGGCATGACGGCCGGTGCGATCGGTTCCTTTGTCGGCAATCCGAGCGAGCTGATCCTGATCCGGATGACGGCCGACGGCCGCTTGCCAGTGGCCGAGCGGCGCAACTACACCGGCTTCTTCAACGCTCTGTTCCGGATTGCCCGGGAAGAAGGTGTCCTGTCGCTATGGCGCGGTTGCGTACCGACGATGGGCCGCGCGATGGTGGTAAATGCTGCCCAGCTCGCTTCCTACTCGCAAGCCAAGGCGTACCTGGTCAGCTCGCAGCTGCTCCAGGAAGGTATTGGACTGCACTTTACCGCCAGTATGTTCTCGGGACTGATCACGACGGCGGCCTCCCTACCAGTCGACATTGCCAAGACAAGAATTCAAAACATGAAGGTTGCGCCGGGTGAAGTGCCGCCATACAAGAGCACGGTCGACGTCATCGTGAAGGTAATCCGGCACGAGGGTCTGTTTGCGCTCTGGAAGGGCTTCACCGCCTACTACGGCCGGCTCGGGCCGCACACCGTGCTAACGTTCATCATTCTGGAGCAGCTGAACGGGCTGTACAACAAGCACATGGGGCGTGGAGGGCAGCAAATCGG] [+] EMBL BM586914 [CCGGCCCTTTTCGCCAGGAAAACCAACAAAACACCGAACCTGCTCGCCTCGATGGCCATGGGCATGACGGCCGGTGCGATCGGTTCCTTTGTCGGCAATCCGAGCGAGCTGATCCTGATCCGGATGACGGCCGACGGCCGCTTGCCAGTGGCCGAGCGGCGCAACTACACCGGCTTCTTCAACGCTCTGTTCCGGATTGCCCGGGAAGAAGGTGTCCTGTCGCTATGGCGCGGTTGCGTACCGACGATGGGCCGCGCGATGGTGGTAAATGCTGCCCAGCTCGCTTCCTACTCGCAAGCCAAGGCGTACCTGGTCAGCTCGCAGCTGCTCCAGGAAGGTATTGGACTGCACTTTACCGCCAGTATGTTCTCGGGACTGATCACGACGGCGGCCTCCCTACCAGTCGACATTGCCAAGACAAGAATTCAAAACATGAAGGTTGCGCCGGGTGAAGTGCCGCCATACAAGAGCACGGTCGACGTCATCGTGAAGGTAATCCGGCACGAGGGTCTGTTTGCGCTCTGGAAGGGCTTCACCGCCTACTACGGCCGGCTCGGGCCGCACACCGTGCTAACGTTCATCATTCTGGAGCAGCTGAACGGGCTGTACAACAAGCACATGGGGCGTGGAGGGCAGCAAATCGG] consensusID : consensus_8944#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 629 fasta sequence [ACCCACGCGTCCGCTCGATCTCACCCCGGTGCCCGAAGTCATCGCGTTAGGAGCGTTCCCCTGCTAAAGTGTGTTTCCGAAATGTCCGACAAAAAGCGACCTGTTTACGTGCAGTACGTCCTTGGAGGACTATCTGGCATCGGAGCGACATGTGTCGTGCAGCCGCTGGATCTGGTGAAAACGCGCATGCAAATCTCCGGCATGGGCGGTGCGGCCAAGGAGTACAACAACACGTTCGACGCGATCGGCAAGATCATGCGGCGTGAGGGCGTGCTGGCGATGTACAAGGGGCTGAGCGCCGCCATCATGCGACAGGCTACCTACACCACGACCCGCCTCGGTGTGTACACGTCGCTCAATGATGCCTACAAACAGAAAACCAACAAAACACCGAACCTGCTCGCCTCGATGGCCATGGGCATGACGGCCGGTGCGATCGGTTCCTTTGTCGGCAATCCGAGCGAGCTGATCCTGATCCGGATGACGGCCGACGGCCGCTTGCCAGTGGACGAGCGGCGCAACTACACCGGCTTCTTCAACGCTCTGTTCCGGATTGCCCGGGAAGAAAGTGTCCTGTCGCTATGGCGCGGTTGCGTACCGACGATGGGCCGCGCGATGGTGGTAAATGC] [+] EMBL BM627841 [ACCCACGCGTCCGCTCGATCTCACCCCGGTGCCCGAAGTCATCGCGTTAGGAGCGTTCCCCTGCTAAAGTGTGTTTCCGAAATGTCCGACAAAAAGCGACCTGTTTACGTGCAGTACGTCCTTGGAGGACTATCTGGCATCGGAGCGACATGTGTCGTGCAGCCGCTGGATCTGGTGAAAACGCGCATGCAAATCTCCGGCATGGGCGGTGCGGCCAAGGAGTACAACAACACGTTCGACGCGATCGGCAAGATCATGCGGCGTGAGGGCGTGCTGGCGATGTACAAGGGGCTGAGCGCCGCCATCATGCGACAGGCTACCTACACCACGACCCGCCTCGGTGTGTACACGTCGCTCAATGATGCCTACAAACAGAAAACCAACAAAACACCGAACCTGCTCGCCTCGATGGCCATGGGCATGACGGCCGGTGCGATCGGTTCCTTTGTCGGCAATCCGAGCGAGCTGATCCTGATCCGGATGACGGCCGACGGCCGCTTGCCAGTGGACGAGCGGCGCAACTACACCGGCTTCTTCAACGCTCTGTTCCGGATTGCCCGGGAAGAAAGTGTCCTGTCGCTATGGCGCGGTTGCGTACCGACGATGGGCCGCGCGATGGTGGTAAATGC] consensusID : consensus_8944#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 625 fasta sequence [NGCCNCGAGGNNCACGACTCCATTGCCTGAAATATTTAGTGCCTCAAAGTAGTATATCCTCTTTGCCAAGCGTTTGAGTTGAACTGATTCTTCGCAAAATGTGAAGAGAGCGTTCGGCCCCCCTTCAAATGCTTCGAGAGAGTGAAGCTCCTCCCCTTCCTCCATTCGTCATCCATCAATTTTTCTCCGCGCACTCACACATCTACACGCGCAGCTGTTCGCATGGCAACACGTGAGATGCGTGACATGCTTTCTCGCTCATCACGAAGGATTTGCTTCGAAAGAGCTCGGCTTGGTTGGTATGGGAAATAACTGTTTCGAAACACACCTGTTATGGTTTGCATGGCAACCTTCAAATGTTCAACATCGCACATTCCCCTCACAACGCAACGGGGTTCGGTATTCGTTTGCNCAAAAAAAAACCGTTGGCAACCGTCCAAGCAAGCGCGGGATGNGCGCCACGCTAGAGTAATGCCGCGACGCGTCTNTTCAAACTTTCCCTGCTATCGCCGGGCTGTGCTGCTGGCCGACTGGCAGGCAGTCAGTCAGTCAGTTGAGCCTAACTTGAGCCGGCAAATGATAGGATAGCCAATTCGTAATGCAATATTAAATCGTAGGTAACATC] [+] EMBL AL932741 [NGCCNCGAGGNNCACGACTCCATTGCCTGAAATATTTAGTGCCTCAAAGTAGTATATCCTCTTTGCCAAGCGTTTGAGTTGAACTGATTCTTCGCAAAATGTGAAGAGAGCGTTCGGCCCCCCTTCAAATGCTTCGAGAGAGTGAAGCTCCTCCCCTTCCTCCATTCGTCATCCATCAATTTTTCTCCGCGCACTCACACATCTACACGCGCAGCTGTTCGCATGGCAACACGTGAGATGCGTGACATGCTTTCTCGCTCATCACGAAGGATTTGCTTCGAAAGAGCTCGGCTTGGTTGGTATGGGAAATAACTGTTTCGAAACACACCTGTTATGGTTTGCATGGCAACCTTCAAATGTTCAACATCGCACATTCCCCTCACAACGCAACGGGGTTCGGTATTCGTTTGCNCAAAAAAAAACCGTTGGCAACCGTCCAAGCAAGCGCGGGATGNGCGCCACGCTAGAGTAATGCCGCGACGCGTCTNTTCAAACTTTCCCTGCTATCGCCGGGCTGTGCTGCTGGCCGACTGGCAGGCAGTCAGTCAGTCAGTTGAGCCTAACTTGAGCCGGCAAATGATAGGATAGCCAATTCGTAATGCAATATTAAATCGTAGGTAACATC] consensusID : consensus_8944#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 506 fasta sequence [GCAAGAACCNCGGCACNGAGGCTCAAGCAACCCCAGAAATTGATAAAAGCTGAGCTTAATAGATAGAGAGATAAAGAAGATGCCGTATTACTTCGGAATTGCCGGTAAAAAAGCACACAGATTTAAAGGAAAACAACCAGCCACAAATAACTGTTTCGAAACACACCTGTTTGGTTGCATGGCAACCGTTCAAATGTTCAACATCGCACATCCCCCTACAACGCAACGGAGATTCGGTTTCGTGTGCAAAAAAAACGTTGGCGACCGTCCAAGCAAGCGCGGGATGGCGCCACGCTAGAGTAATGCCGCGACGCGTCTTTCAAGCTTTCCCTGGCTTCGCCGGGCTGTGCTGCTGACCGACTGCCAGCCAGTCAGTCAGTCAGTTGTGAACTTGAGCCGGCAAATGATNGGATAGCAATTCGTAATGCAATATTAAATCGTAGGGTAGCAGCAGGTAGGCACAAGCGCTTTAAGCCGAGAAAACANACNNACTAGGAAGGAAACGA] [+] EMBL BX468351 [GCAAGAACCNCGGCACNGAGGCTCAAGCAACCCCAGAAATTGATAAAAGCTGAGCTTAATAGATAGAGAGATAAAGAAGATGCCGTATTACTTCGGAATTGCCGGTAAAAAAGCACACAGATTTAAAGGAAAACAACCAGCCACAAATAACTGTTTCGAAACACACCTGTTTGGTTGCATGGCAACCGTTCAAATGTTCAACATCGCACATCCCCCTACAACGCAACGGAGATTCGGTTTCGTGTGCAAAAAAAACGTTGGCGACCGTCCAAGCAAGCGCGGGATGGCGCCACGCTAGAGTAATGCCGCGACGCGTCTTTCAAGCTTTCCCTGGCTTCGCCGGGCTGTGCTGCTGACCGACTGCCAGCCAGTCAGTCAGTCAGTTGTGAACTTGAGCCGGCAAATGATNGGATAGCAATTCGTAATGCAATATTAAATCGTAGGGTAGCAGCAGGTAGGCACAAGCGCTTTAAGCCGAGAAAACANACNNACTAGGAAGGAAACGA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_8944#1 ------------------------CCGGCCCTTTTCGCCAGGAAAACCAA-CAAAACACC 35 consensus_8944#2 ---------------------------------------------ACCCA-CGCGTC--C 12 consensus_8944#0 CCGCCCACGCGTCCGCCCACGCGTCCGGTCGGTGTCCGCACAACATCGGATCCCAATTAC 60 consensus_8944#3 ---------------------------------------------------NGCCNCGAG 9 consensus_8944#4 ------------------------------------------------------------ consensus_8944#1 GAACCTGCTCGCCTCGATGGCCATGGGCATGACGGCCGGTGCGATCGGTTCCTTTGTCGG 95 consensus_8944#2 GCTCGATCTCACCCCGGTGCCCGAAGTCATCGCGTTAGGAGCGTTCCCCTGCTAAAGTGT 72 consensus_8944#0 ACTCGATCTCACCCCGGTGCCCGAAGTCATCGCGTTAGGAGCGTTCCCCTGCTAAAGTGT 120 consensus_8944#3 GNNCACGACTCCATTGCCTGAAATATTTAGTGCCTCAAAGTAGTATATCCTCTTTGCCAA 69 consensus_8944#4 ------------------------------------------------------------ consensus_8944#1 CAATCCGAGCGAG-CTGATCC----TGATCCGG-ATGACGGCCGACGGCCGCTTGCCAGT 149 consensus_8944#2 GTTTCCGAAATGT-CCGACAAAAAGCGACCTGT-TTACGTGCAGTACGTCCTTGGAGGAC 130 consensus_8944#0 GTTTCCGAAATGT-CCGACAAAAAGCGACCTGT-TTACGTGCAGTACGTCCTTGGAGGAC 178 consensus_8944#3 GCGTTTGAGTTGAACTGATTCTTCGCAAAATGTGAAGAGAGCGTTCGGCCCCCCTTCAAA 129 consensus_8944#4 ------------------------------------------------------------ consensus_8944#1 GGCCGAGCGGCGCAACTACACCGGCTTCTTCAACGCTCTGTTCCGGATTGCCCGGGAAGA 209 consensus_8944#2 TATCTGGCATCGGAGCGACATGTGTCGTGCAGCCGCTGGATCTGGTGAAAACGCGCATGC 190 consensus_8944#0 TATCTGGCATCGGAGCGACATGTGTCGTGCAGCCGCTGGATCTGGTGAAAACGCGCATGC 238 consensus_8944#3 TGCTTCGAGAGAGTGAAGCTCCTCCCCTTCCTCCATTCGTCATC-CATCAATTTTTCTCC 188 consensus_8944#4 --------------------------------GCAAGAACCNCGGCACNGAGGCTCAAGC 28 * consensus_8944#1 AGGTGTCCT-GTCGCTATG-GCGCGGTTGCGTAC--CGACGATGGGCCGCGCGATGGTGG 265 consensus_8944#2 AAATCTCCG-GCATGGGCG-GTGCGGCCAAGGAGTACAACAACACGTTCGACGCGATCGG 248 consensus_8944#0 AAATCTCCG-GCATGGGCG-GTGCGGCCAAGGAGTACAACAACACGTTCGACGCGATCGG 296 consensus_8944#3 GCGCACTCACACATCTACACGCGCAGCTGTTCGC-ATGGCAACACGTGAGATGCGTGACA 247 consensus_8944#4 AACCCCAGAAATTGATAAAAGCTGAGCTTAATAG-ATAGAGAGATAAAGAAGATGCCGTA 87 * * * consensus_8944#1 TAA----ATGCTGCCCA---GCTCGCTTCCTACTCGCAAGCCAAGGCGTACCTGGTCAGC 318 consensus_8944#2 CAAGATCATGCGGCGTGAGGGCGTGCTGGCGATGTACAAG--GGGCTGAGCGCCGCCATC 306 consensus_8944#0 CAAGATCATGCGGCGTGAGGGCGTGCTGGCGATGTACAAG--GGGCTGAGCGCCGCCATC 354 consensus_8944#3 TGC---TTTCTCGCTCA---TCACGAAGGATTTGCTTCGAAAGAGCTCGGCTTGGTTGGT 301 consensus_8944#4 TTA---CTTCGGAATTG---CCGGTAAAAAAGCACACAGATTTAAAGGAAAACAACCAGC 141 * * consensus_8944#1 TC--GCAGCTGCTCCAGGAAGGTATTGGACTGCACTTTACCGCCAGTATGTT-CTCGGGA 375 consensus_8944#2 AT--GCGACAGGCTACCTACACCAC--GACC-CGCCTCGGTGTGTACACGTCGCTCAATG 361 consensus_8944#0 AT--GCGACAGGCTACCTACACCAC--GACC-CGCCTCGGTGTGTACACGTCGCTCAATG 409 consensus_8944#3 ATGGGAAATAACTGTTTCGAAACAC---ACC-TGTTATGGTTTGCATGGCAACC-TTCAA 356 consensus_8944#4 C--ACAAATAACTGTTTCGAAACAC---ACC-TGTT-TGGTT-GCATGGCAACCGTTCAA 193 * ** * consensus_8944#1 CTGATCACGAC--GGCGGCCTCCCTACCAGTCGACATTGCCAAGACAAGAATTCAAAACA 433 consensus_8944#2 ATGCCTACAAACAGAAAACCAACAAAACACCGAACCTGCTCGCCTCGATGGCCATGGGCA 421 consensus_8944#0 ATGCCTACAAACAGAAAACCAACAAAACACCGAACCTGCTCGCCTCGATGGCCATGGGCA 469 consensus_8944#3 ATGTTCAACATCGCACATTCCCCTCACAACGCAACGGGGTTCGGTATTCGTTTGCNCAAA 416 consensus_8944#4 ATGTTCAACATCGCACATCCCCCT-ACAACGCAACGGAGATTCGGTTTCGTGTGCAAAAA 252 ** * * * * * * ** * consensus_8944#1 TGAAGGTTGCGCCGGGTGAAGTGCCGCCATACA-AGAGCACGGTCGACGTCATCGTGA-- 490 consensus_8944#2 TGACGGCCGGTGCGATCG--GTTCCTTTGT-CG-GCAATCCGAGCGAGCTGATCCTGATC 477 consensus_8944#0 TGACGGCCGGTGCGATCG--GTTCCTTTGT-CG-GCAATCCGAGCGAGCTGATCCTGATC 525 consensus_8944#3 AAAAAACCGTTGGCAACC--GTCCAAGCAAGCGCGGGATGNGCGCCACGCTAGAGTAATG 474 consensus_8944#4 AAA----CGTTGGCGACC--GTCCAAGCAAGCGCGGGATGG-CGCCACGCTAGAGTAATG 305 * * ** * * * * * * * consensus_8944#1 -AGGTAATCCGGCACGAGGGTCTGTTTGCGCTCTGGAAGGGC---TTCACCGCCT-ACTA 545 consensus_8944#2 CGGATGACGGCCGACGGCCGCTTGCCAGTGGACGAGCGGCGCAACTACACCGGCT-TCTT 536 consensus_8944#0 CGGATGACGGCCGACGGCCGCTTGCCAGTGGACGAGCGGCGCAACTACACCGGCT-TCTT 584 consensus_8944#3 CCG-CGACGCGTCTNTTCAAACTTTCCCTGCTATCGCCGGGCTGTGCTGCTGGCCGACTG 533 consensus_8944#4 CCG-CGACGCGTCTTT-CAAGCTTTCCCTGGCTTCGCCGGGCTGTGCTGCTGACCGACTG 363 * * * * * * ** * * * ** consensus_8944#1 CGGCCGGCTCGGGCCGCACACCGTGC-TAACGTTCATCATTCTGGAGCAGCTGAAC-GGG 603 consensus_8944#2 CAAC--GCTCTGTTC-CGGATTGCCC-GGGAAGAAAGTGTCCTGTCGCTATGGCGC-GG- 590 consensus_8944#0 CAAC--GCTCTGTTC-CGGATTGCCC-GGGAAGAAGGTGTCCTGTCGCTATGGCGC-GG- 638 consensus_8944#3 GCAGGCAGTCAGTCAGTCAGTTGAGCCTAACTTGAGCCGGCAAATGATAGGATAGCCAAT 593 consensus_8944#4 CCAGCCAGTCAGTCAGTCAGTTGTG---AACTTGAGCCGGCAAATGATNGGATAGC-AAT 419 ** * * * consensus_8944#1 CTGTACAACAAGCACATGGGGCGTGGAGGGCAGCAAATCGG------------------- 644 consensus_8944#2 TTGCGTACCGACGATGGGCCGCGCG-ATGGTGGTAAATGC-------------------- 629 consensus_8944#0 TTGCGTACCGACGATGGGCCGCGCG-ATGGTGGTAAATGCCGCCCAGCTCGCTTCCTACT 697 consensus_8944#3 TCGTAATGCAATATTAAATCGTAGG--TAACATC-------------------------- 625 consensus_8944#4 TCGTAATGCAATATTAAATCGTAGG-GTAGCAGCAGGTAGGCACAAGCGCTTTAAGCCGA 478 * * * * * consensus_8944#1 ------------------------------------------------------------ consensus_8944#2 ------------------------------------------------------------ consensus_8944#0 CGCAAGCCAAGGCGTACCTGGTCAGCTCGCAGCTGCTCCAGGAAGGTATTGGACTGCACT 757 consensus_8944#3 ------------------------------------------------------------ consensus_8944#4 GAAAACANACNNACTAGGAAGGAAACGA-------------------------------- 506 consensus_8944#1 ------------------------------------------------------------ consensus_8944#2 ------------------------------------------------------------ consensus_8944#0 TTACCGCCAGTATGTTCTCGGGACTGATCACGACGGCCGCCTCCCTACCAGTCGACATTG 817 consensus_8944#3 ------------------------------------------------------------ consensus_8944#4 ------------------------------------------------------------ consensus_8944#1 ------------------------------------------------------------ consensus_8944#2 ------------------------------------------------------------ consensus_8944#0 CCAAGACAAGAATTCAAAACATGAAGGTTGCGCCGGGTGAAGTGCCGCCATACAAGAGCA 877 consensus_8944#3 ------------------------------------------------------------ consensus_8944#4 ------------------------------------------------------------ consensus_8944#1 ------------------------------------------------------------ consensus_8944#2 ------------------------------------------------------------ consensus_8944#0 CGGTCGACGTCATCGTGAAGGTAATCCGGCACGAGGGTCTGTTTGCGCTCTGGAAGGGCT 937 consensus_8944#3 ------------------------------------------------------------ consensus_8944#4 ------------------------------------------------------------ consensus_8944#1 ------------------------------------------------------------ consensus_8944#2 ------------------------------------------------------------ consensus_8944#0 TCACCGCCTACTACGGCCGGCTCGGCCCGCACACCGTGCTAACGTTCATCATTCTGGAGC 997 consensus_8944#3 ------------------------------------------------------------ consensus_8944#4 ------------------------------------------------------------ consensus_8944#1 ------------------------------------------------------------ consensus_8944#2 ------------------------------------------------------------ consensus_8944#0 AGCTGAACGGGCTGTACAACAAGCACATGGGCGTGGAGGGCAGCAAATCGGGCCTGTAAG 1057 consensus_8944#3 ------------------------------------------------------------ consensus_8944#4 ------------------------------------------------------------ consensus_8944#1 ------------------------------------------------------------ consensus_8944#2 ------------------------------------------------------------ consensus_8944#0 CGGTCCGATCATCTTCCTTCCATCCATCCCTCCCTACCTCTTCCGTTAGCCACGTGTTCA 1117 consensus_8944#3 ------------------------------------------------------------ consensus_8944#4 ------------------------------------------------------------ consensus_8944#1 ------------------------------------------------------------ consensus_8944#2 ------------------------------------------------------------ consensus_8944#0 ATCCCTCTCGTGGCGAGAGAGAGCGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA 1177 consensus_8944#3 ------------------------------------------------------------ consensus_8944#4 ------------------------------------------------------------ consensus_8944#1 ------------------------------------------------------------ consensus_8944#2 ------------------------------------------------------------ consensus_8944#0 GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAGGGCGGCAGCGAACAC 1237 consensus_8944#3 ------------------------------------------------------------ consensus_8944#4 ------------------------------------------------------------ consensus_8944#1 ------------------------------------------------------------ consensus_8944#2 ------------------------------------------------------------ consensus_8944#0 GACAACGCCGGAAACGCACGCCGCTGCTGCTGTGCACGCATTTCTTTCGATGGCAATTTG 1297 consensus_8944#3 ------------------------------------------------------------ consensus_8944#4 ------------------------------------------------------------ consensus_8944#1 ------------------------------------------------------------ consensus_8944#2 ------------------------------------------------------------ consensus_8944#0 TAAATGTTACTTTCCGTTTTTTATTTCCTGCTATGTAACTTTTTGTTGCTGTATCATCAC 1357 consensus_8944#3 ------------------------------------------------------------ consensus_8944#4 ------------------------------------------------------------ consensus_8944#1 ------------------------------------------------------------ consensus_8944#2 ------------------------------------------------------------ consensus_8944#0 CCTCAAACAACCCCAGAAATTGATAAAAAGCTGAGCTTAATAGATAGAGAGATAAAGAAG 1417 consensus_8944#3 ------------------------------------------------------------ consensus_8944#4 ------------------------------------------------------------ consensus_8944#1 ------------------------------------------------------------ consensus_8944#2 ------------------------------------------------------------ consensus_8944#0 ATGCCGTATTACTTCGGAATTGCCGGTAAAAAAGCACACAGATTTAAAGGAAAACAACCA 1477 consensus_8944#3 ------------------------------------------------------------ consensus_8944#4 ------------------------------------------------------------ consensus_8944#1 ------------------------------------------------------------ consensus_8944#2 ------------------------------------------------------------ consensus_8944#0 GCCACAAATAACTGTTTCGAAACACACCTGTTTGGTTGCATGGCAACCTTCAAATGTTCA 1537 consensus_8944#3 ------------------------------------------------------------ consensus_8944#4 ------------------------------------------------------------ consensus_8944#1 ------------------------------------------------------------ consensus_8944#2 ------------------------------------------------------------ consensus_8944#0 ACATCGCACATCCCCCTACAACGCAACGGAGATTCGGTTTCGTTTGCAAAAAAAACGTTG 1597 consensus_8944#3 ------------------------------------------------------------ consensus_8944#4 ------------------------------------------------------------ consensus_8944#1 ------------------------------------------------------------ consensus_8944#2 ------------------------------------------------------------ consensus_8944#0 GCAACCGTCCAAGCAAGCGCGGGATGGCGCCACGCTAGAGTAATGCCGCGACGCGTCTTT 1657 consensus_8944#3 ------------------------------------------------------------ consensus_8944#4 ------------------------------------------------------------ consensus_8944#1 ------------------------------------------------------------ consensus_8944#2 ------------------------------------------------------------ consensus_8944#0 CAACTTTCCCTGCTTCGCCGGGCTGTGCTGCTGACCGACTGCCAGCCAGTCAGTCAGTCA 1717 consensus_8944#3 ------------------------------------------------------------ consensus_8944#4 ------------------------------------------------------------ consensus_8944#1 ------------------------------------------------------------ consensus_8944#2 ------------------------------------------------------------ consensus_8944#0 GTTGTGAACTTGAGCCGGCAAATGATAGGATAGCAATTCGTAATGCAATATTAAATCGTA 1777 consensus_8944#3 ------------------------------------------------------------ consensus_8944#4 ------------------------------------------------------------ consensus_8944#1 ------------------------------------------------------------ consensus_8944#2 ------------------------------------------------------------ consensus_8944#0 GGGTAGCAGCAGTAGCACAACGCTTTAAGCCGAGAAACACACACACTAGGAAGGAAACGA 1837 consensus_8944#3 ------------------------------------------------------------ consensus_8944#4 ------------------------------------------------------------ consensus_8944#1 ------------------------------------------------------------ consensus_8944#2 ------------------------------------------------------------ consensus_8944#0 ATTGTGACAATATAGTGCGGGAATAGTGTTTTTTTTATAGTAGCAAGTGGAGCAGTTGCC 1897 consensus_8944#3 ------------------------------------------------------------ consensus_8944#4 ------------------------------------------------------------ consensus_8944#1 ------------------------------------------------------------ consensus_8944#2 ------------------------------------------------------------ consensus_8944#0 ACAACGTCCTGTATTCAGGAAACGTTCGCACCGTGAAGCAGCTGCAGCATCAGCAGGAGA 1957 consensus_8944#3 ------------------------------------------------------------ consensus_8944#4 ------------------------------------------------------------ consensus_8944#1 --------- consensus_8944#2 --------- consensus_8944#0 ATAACCGAA 1966 consensus_8944#3 --------- consensus_8944#4 --------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||