Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Anopheles gambiae
cluster # 8945 cluster # 8945       Sequences # 13       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8945#0 length = 727 sequences # 9  
consensus_8945#1 length = 650 sequences # 3  
consensus_8945#2 length = 605 sequences # 1  

consensusID : consensus_8945#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 727
fasta sequence
                              [GAATCGCCCCGAGGTCCGCAG-CGTTTGAGCAAAAGTCACAGGCCGTTACATCATCTGATCTTCGCCCGCCCAGCCCTTCCCAGACATGGAGCAGAAATTCAACGAATCCGCCGAGAAGGTGAAGAGCTTCACCAAGCGACCGAGCGACGCGGAGCTGCTGGAGCTGTACGCACTGTTCAAGCAGGCGACGGTCGGCGACAACGAAACCGAGAAGCCCGGCATGTTCGATCTGAAGGGCAAGGCCAAATGGCAGGCGTGGGCTGACCGGAAAGGCACCAGCAAGGAAGCGGCCATGGAAGCGTACATCAAGATGGTCGAGGAGCTGTCCGCGAAGTACGTCTAAACGGACGGTGGCGCTAAGCAAATTGCCAGACGGACAAACGGCGCTGGAGTTTAATACACATTCGGTTCGGTACTT-TTGTTTCTACAACTATAAACATTCAAAAAAAAACTAC-TGGGGCCATAGCA-GTTCCTTACCGTGGTGATCC-T-GTATTCTTCCTCGGACGCTTCGCGAGTGTTTAGTTGTATTGTTTTGTTATCAGTTTCTATTTTTTTTTTGTTTCGGGGGCACCTTGGAGCAATTCGTTTGCTTATCGATCGAGGGGAGAATACGGTAAGGTTTTGCACCATACGTTAGCTAACGGGTGGGAAGATAACAACCAAAAATGTTGATACAGGGTTGAGTAAGCTTACAAATTAATAAAGTGAAATGTTTTACTAAAAAAAA]

[+] EMBL AL932581             [GAATCGCCCCGAGGTTAACAG CGTTTGAGC AAAGTCACAGGCCGTTACATCATCTGATCTTCGCCCGCCCAGCCCTTCCCAGACATGGAGCAGAAATTCAACGAATCCGCCGAGAAGGTGAAGAGCTTCACCAAGCGACCGAGCGACGCGGAGCTGCTGGAGCTGTACGCACTGTTCAAGCAGGCGACGGTCGGCGACAACGAAACCGAGAAGCCCGGCATGTTCGATCTGAAGGGCAAGGCCAAATGGCAGGCGTGGGCTGACCGGAAAGGCACCAGCAAGGAAGCGGCCATGGAAGCGTACATCAAGATGGTCGAGGAGCTGTCCGCGAAGTACGTCTAAACGGACGGTGGCGCTAAGCAAATTGCCAGACGGACAAACGGCGCTGGAGTTTAATACACATTCGGTTCGGTACTTATTGTTTCTACAACTATAAACATTCAAAAAAAAACTACATGGGGCCATAGCAGGTTCCTTACCGTGGTGATCCNTGGTATTCTTCCTCGG                                                                                                                                                                                                                                ]
[+] EMBL BM584253             [               CCGCAG CGTTTGAGCAAAAGTCACAGGCCGTTACATCATCTGATCTTCGCCCGCCCAGCCCTTCCCAGACATGGAGCAGAAATTCAACGAATCCGCCGAGAAGGTGAAGAGCTTCACCAAGCGACCGAGCGACGCGGAGCTGCTGGAGCTGTACGCACTGTTCAAGCAGGCGACGGTCGGCGACAACGAAACCGAGAAGCCCGGCATGTTCGATCTGAAGGGCAAGGCCAAATGGCAGGCGTGGGCTGACCGGAAAGGCACCAGCAAGGAAGCGGCCATGGAAGCGTACATCAAGATGGTCGAGGAGCTGTCCGCGAAGTACGTCTAAACGGACGGTGGCGCTAAGCAAATTGCCAGACGGACAAACGGCGCTGGAGTTTAATACACATTCGGTTCGGTACTT TTGTTTCTACAACTATAAACATTCAAAAAAAAACTAC TGGGGCCATAGCA GTTCCTTACCGTGGTGATCC T GTATTCTTCCTCGGACGCTTCGCGAGTGTTTAGTTGTATTGTTTTGTTATCAGTTTCTATTTTTTTTTTGTTTCGGGGGCACCTTGGAGCAATTCGTTTGCTTATCGATCGAGGGGAGAATACGGTAAGGTTTTGCACCATACGTTAGCTAACGGGTGGGAAGATAACAACCAAAAATGTTGATACAGGGTTGAG                                           ]
[+] EMBL BM586259             [               CCGCGGACGCGTGGGCAAAAGTCACAGGCCGTTACATCATCTGATCTACGCCCGCCCAGCCCTTCCCAGACATGGAGCAGAAATTCAACGAATCCGCCGAGAAGGTGAAGAGCTTCACCAAGCGACCGAGCGACGCGGAGCTGCTGGAGCTGTACGCACTGTTCAAGCAGGCGACGGTCGGCGACAACGAAACCGAGAAGCCCGGCATGTTCGATCTGAAGGGCAAGGCCAAATGGCAGGCGTGGGCTGACCGGAAAGGCACCAGCAAGGAAGCGGCCATGGAAGCGTACATCAAGATGGTCGAGGAGCTGTCCGCGAAGTACGTCTAAACGGACGGTGGCGCTAAGCAAATTGCCAGACGGACAAACGGCGCTGGAGTTTAATACACATTCGGTTCGGTACTT TTGTTTCTACAACTATAAACATTCAAAAAAAAACTAC TGGGGCCATAGCA GTTCCTTACCGTGGTGATCC T GTATTCTTCCTCGGACGCTTCGCGAGTGTTTAGTTGTATTGTTTTGTTATCAGTTTCTATTTTTTTTTTGTTTCGGGGGCACCTTGGAGCAATTCGTTTGCTTATCGATCGAGGGGAGAATACGGTAAGGGTTTGCACCATACGTTAGCTAACGGGTGGGA                                                                             ]
[+] EMBL BM581364             [                    ccgGTTTGAGCAAAAGTCACAGGCCGTTACATCATCTGATCTTCGCCCGCCCAGCCCTTCCCAGACATGGAGCAGAAATTCAACGAATCCGCCGAGAAGGTGAAGAGCTTCACCAAGCGACCGAGCGACGCGGAGCTGCTGGAGCTGTACGCACTGTTCAAGCAGGCGACGGTCGGCGACAACGAAACCGAGAAGCCCGGCATGTTCGATCTGAAGGGCAAGGCCAAATGGCAGGCGTGGGCTGACCGGAAAGGCACCAGCAAGGAAGCGGCCATGGAAGCGTACATCAAGATGGTCGAGGAGCTGTCCGCGAAGTACGTCTAAACGGACGGTGGCGCTAAGCAAATTGCCAGACGGACAAACGGCGCTGGAGTTTAATACACATTCGGTTCGGTACTT TTGTTTCTACAACTATAAACATTC                                                                                                                                                                                                                                                                                                 ]
[+] EMBL BX628144             [                       GTTTGAGCAAAAGTCACAGGNCGNTACATCATCTGATCTTCGCCCGCCCAGCCCTTCCCAGACATGGAGCAGAAATTCAACGAATCCGCCGAGAAGGTGAAGAGCTTCACCAAGCGACCGANCGACNCGGAGCTGCTGGAGCTGTACGCACTGTTCAAGCAGGCGACGGTCGGCGACAACGAAACCGAGAAGCCCGGCATGTTCGATCTGAAGGGCAAGGCCAAATGGCAGGCGTGGGCTGACCGGAAAGGCACCAGCAAGGAAGCGGCCATGGAAGCGTACATCAAGATGGTCGAGGAGCTGTCCGCGAAGTACGTCTAAACGGACGGTGGCGCTAAGCAAATTGCCAGACGGACAAACGGCGCTGGAGTTTAATACACATTCGGTTCGGTACTT TTGTTTCTACANCTATAAACATTCAAAAAAAAACTAC TGGGGCCATANCA GTTCCTTACCGTGGTGATCC T GTATTCTTCCTCGGACGCTTCGCGAGTGTTTAGTTGTATTGTTTTGNTATCAGTTTCTATTTTTTTTTTGTTTCGGGGGCACCTTGG                                                                                                                                                       ]
[+] EMBL BX616764             [                                           CCGTTACATCATCTGATCTTCGCCCGCCCAGCCCTTCCCAGACATGGAGCAGAAATTCAACGAATCCGCCGAGAAGGTGAAGAGCTTCATCAAGCGACCGAGCGACGCGGAGCTGCTGGAGCTGTACGCACTGTTCAAGCAGTCGACGGTCGGCGACAACGAAACCGAGAAGCCCGGCATGTTCGATCTGAAGGGCAAGGCCAAATGGCAGGCGTGGGCTGACCGGAAAGGCACCAGCAAGGAAGCGGCCATGGAAGCGTACATCAAGATGGTCGAGGAGCTGTCCGCGAAGTACGTCTAAACGGACGGTGGCGCTAAGCAAATTGCCAGACGGACAAACGGCGCTGGAGTTTAATACACATTCGGTTCGGTACTT TTGTTTCTACAACTATAAACATTCAAAAAAAAACTAC TGGGGCCATAGCA GTTCCTTACCGTGGTGATCC T GTATTCTTCCTCGGACGCTTCGCGAGTGTTTAGTTGTATTGTTTTGTTATCAGTTTCTATTTTTTTTTTGTTTCGGGGGCACCTTGGAGCAATTCGTTTGCTTATCGATCGAGGGGAGAATACGGTAAGGTTTTGCACCATACGTTAGCTAACGGGTGGGAAGATAACAACCAAAAATGTTGATACAGGGTTGAGTAAGCTTACAAATTAATAAAGTGAA                  ]
[+] EMBL BX623150             [                                                           TCTTCGCCCGCCCAGCCCTTCCCAGACATGGAGCAGAAATTCAACGAATCCGCCGAGAAGGTGAAGAGCTTCACCAAGCGACCGAGCGACGCGGAGCTGCTGGAGCTGTACGCACTGTTCAAGCAGGCGACGGTCGGCGACAACGAAACCGAGAAGCCCGGCATGTTCGATCTGAAGGGCAAGGCCAAATGGCAGGCGTGGGCTGACCGGAAAGGCACCAGCAAGGAAGCGGCCATGGAAGCGTACATCAAGATGGTCGAGGAGCTGTCCGCGAAGTACGTCTAAACGGACGGTGGCGCTAAGCAAATTGCCAGACGGACAAACGGCGCTGGAGTTTAATACACATTCGGTTCGGTACTT TTGTTTCTACAACTATAAACATTCAAAAAAAAACTAC TGGGGCCATAGCA GTTCCTTACCGTGGTGATCC T GTATTCTTCCTCGGACGCTTCGCGAGTGTTTAGTTGTATTGTTTTGTTATCAGTTTCTATTTTTTTTTTGTTTCGGGGGCACCTTGGAGCAATTCGTTTGCTTATCGATCGAGGGGAGAATACGGTAAGGGTTTGCACCATACGTTAGCTAACGGGTGGGAAGATAACAACCAAAAATGNTGATACAGGGNTGAGTAAGCTTACCAATTAATAAAGTGAAATGTT             ]
[+] EMBL BM626038             [                                                                                                                                                                                                   cCGCCCACGCGTCCGAGAAGCCCGGCATGTTCGATCTGAAGGGCAAGGCCAAATGGCAGGCGTGGGCTGACCGGAAAGGCACCAGCAAGGAAGCGGCCATGGAAGCGTACATCAAGATGGTCGAGGAGCTGTCCGCGAAGTACGTCTAAACGGACGGTGGCGCTAAGCAAATTGCCAGACGGACAAACGGCGCTGGAGTTTAATACACATTCGGTTCGGTACTT TTGTTTCTACAACTATAAACATTCAAAAAAAAACTAC TGGGGCCATAGCA GTTCCTTACCGTGGTGATCC T GTATTCTTCCTCGGACGCTTCGCGAGTGTTTAGTTGTATTGTTTTGTTATCAGTTTCTATTTTTTTTTTGTTTCGGGGGCACCTTGGAGCAATTCGTTTGCTTATCGATCGAGGGGAGAATACGGTAAGGTTTTGCACCATACGTTAGCTAACGGGTGGGAAGATAACAACCAAAAATGTTGATACAGGGTTGAGTAAGCTTACAAATTAATAAAGTGAAATGTTTTACT        ]
[-] EMBL AGA283641            [                                                                                                                                                                                                                                                                                                                                                                                                                                                         TTCAAAAAAAAACTAC TGGGGCCATAGCA GTTCCTTACCGTGGTGATCC T GTATTCTTCCTCGGACGCTTCGCGAGTGTTTAGTTGTATTGTTTTGTTATCAGTTTCTATTTTTTTTTTGTTTCGGGGGCACCTTGGAGCAATTCGTTTGCTTATCGATCGAGGGGAGAATACGGTAAGGTTTTGCACCATACGTTAGCTAACGGGTGGGAAGATAACAACCAAAAATGTTGATACAGGGTTGAGTAAGCTTACAAATTAATAAAGTGAAATGTTTTACTAAAAAAAA]


>consensus_8945#0 GAATCGCCCCGAGGTCCGCAGCGTTTGAGCAAAAGTCACAGGCCGTTACATCATCTGATC TTCGCCCGCCCAGCCCTTCCCAGACATGGAGCAGAAATTCAACGAATCCGCCGAGAAGGT GAAGAGCTTCACCAAGCGACCGAGCGACGCGGAGCTGCTGGAGCTGTACGCACTGTTCAA GCAGGCGACGGTCGGCGACAACGAAACCGAGAAGCCCGGCATGTTCGATCTGAAGGGCAA GGCCAAATGGCAGGCGTGGGCTGACCGGAAAGGCACCAGCAAGGAAGCGGCCATGGAAGC GTACATCAAGATGGTCGAGGAGCTGTCCGCGAAGTACGTCTAAACGGACGGTGGCGCTAA GCAAATTGCCAGACGGACAAACGGCGCTGGAGTTTAATACACATTCGGTTCGGTACTTTT GTTTCTACAACTATAAACATTCAAAAAAAAACTACTGGGGCCATAGCAGTTCCTTACCGT GGTGATCCTGTATTCTTCCTCGGACGCTTCGCGAGTGTTTAGTTGTATTGTTTTGTTATC AGTTTCTATTTTTTTTTTGTTTCGGGGGCACCTTGGAGCAATTCGTTTGCTTATCGATCG AGGGGAGAATACGGTAAGGTTTTGCACCATACGTTAGCTAACGGGTGGGAAGATAACAAC CAAAAATGTTGATACAGGGTTGAGTAAGCTTACAAATTAATAAAGTGAAATGTTTTACTA AAAAAAA



consensusID : consensus_8945#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 650
fasta sequence
                              [CCGCGGACCAGCGTTTGAGCAAAAGTCACAGGCCGTTACATCATCTGATCTTCGCCCGCCCAGCCCTTCCCAGACATGGAGCAGAAATTCAACGAATCCGCCGAGAAGGTGAAGAGCTTCACCAAGCGACCGAGCGACGCGGAGCTGCTGGAGCTGTACGCACTGTTCAAGCAGGCGACGGTCGGCGACAACGAAACCGAGAAGCCCGGCATGTTCGATCTGAAGGGCAAGGCCAAATGGCAGGCGTGGGCTGACCGGAAGGGCACCAGCAAGGAAGCGGCCATGGAAGCGTACATCAAGATGGTCGAGGAGCTGTCCGCGAAGTACGTCTAAACGGACGGTGGCGCTAAGCAAATTGCCAGACGGACAAACGGCGCTGGAGTTTAATACACATTCGGTTCGGTACTTTTGTTTCTACAACTATAAAAACGAGGGCCTGAGCAGTTCCTTACCGTGGTGATCCTGTATTCTTCCTCGGACGCTTCGCGAGTGTTTAGTTTTATTGTTTTCTGTTATCAGTTTCTGTTTTTTGTATGTTTCGGGGGCACCTTGGAGCGATTCGTTTGCTTATCGATCGAGGAGAGAATACGGTAAGGTTTTGCACCATACGTTAGCTAACGGGTGGGAAGATAACAACCAAAAATGTTGAT]

[+] EMBL BM613574             [CCGCGGACCAGCGTTTGAGCAAAAGTCACAGGCCGTTACATCATCTGATCTTCGCCCGCCCAGCCCTTCCCAGACATGGAGCAGAAATTCAACGAATCCGCCGAGAAGGTGAAGAGCTTCACCAAGCGACCGAGCGACGCGGAGCTGCTGGAGCTGTACGCACTGTTCAAGCAGGCGACGGTCGGCGACAACGAAACCGAGAAGCCCGGCATGTTCGATCTGAAGGGCAAGGCCAAATGGCAGGCGTGGGCTGACCGGAAGGGCACCAGCAAGGAAGCGGCCATGGAAGCGTACATCAAGATGGTCGAGGAGCTGTCCGCGAAGTACGTCTAAACGGACGGTGGCGCTAAGCAAATTGCCAGACGGACAAACGGCGCTGGAGTTTAATACACATTCGGTTCGGTACTTTTGTTTCTACAACTATAAAAACGAGGGCCTG                                                                                                                                                                                                                   ]
[+] EMBL BM626628             [         ccgGTTTGAGCAAAAGTCACAGGCCGTTACATCATCTGATCTTCGCCCGCCCAGCCCTTCCCAGACATGGAGCAGAAATTCAACGAATCCGCCGAGAAGGTGAAGAGCTTCACCAAGCGACCGAGCGACGCGGAGCTGCTGGAGCTGTACGCACTGTTCAAGCAGGCGACGGTCGGCGACAACGAAACCGAGAAGCCCGGCATGTTCGATCTGAAGGGCAAGGCCAAATGGCAGGCTTGGGCTGACCGGAAGGGCACCAGCAAGGAAGCGGCCATGGAAGCGTACATCAAGATGGTCGAGGAGCTGTCCGCGAAGTACGTCTAAACGGACGGTGGCGCTAAGCAAATTGCCAGACGGAAAAACGGCGCTGGAGTTTAATACACATTCGGTTCGGTACTTTTGTTTCTACAACTATAAAAACGAGGGCCATAGCAGTTCCTTACCGTGGTGATCCTGTATTCTTCCTCGGACGCTTCGCGAGTGTTTAGTTTTATTGTTTTCTGTTATCAGTTTCTGTTTTTTGTATGTTTCGGGGGCACCTTGGAGCGATTCGTTTGCTTATCGATCGAGGAGAGAATACGGTAAGGTTTTGCACCATACGTTAGCTAACGGGTGGGAAGATAACAACCAAAAATGTTGAT]
[+] EMBL AGA284931            [                                                                CCTTCCCAGACATGGAGCAGAAATTCAACGAATCCGCCGAGAAGGTGAAGAGCTTCACCAAGCGACCGAGCGACGCGGAGCTGCTGGAGCTGTACGCACTGTTCAAGCAGGCGACGGTCGGCGACAACGAAACCGAGAAGCCCGGCATGTTCGATCTGAAGGGCAAGGCCAAATGGCAGGCGTGGGCT                                                                                                                                                                                                                                                                                                                                                                                                              ]


>consensus_8945#1 CCGCGGACCAGCGTTTGAGCAAAAGTCACAGGCCGTTACATCATCTGATCTTCGCCCGCC CAGCCCTTCCCAGACATGGAGCAGAAATTCAACGAATCCGCCGAGAAGGTGAAGAGCTTC ACCAAGCGACCGAGCGACGCGGAGCTGCTGGAGCTGTACGCACTGTTCAAGCAGGCGACG GTCGGCGACAACGAAACCGAGAAGCCCGGCATGTTCGATCTGAAGGGCAAGGCCAAATGG CAGGCGTGGGCTGACCGGAAGGGCACCAGCAAGGAAGCGGCCATGGAAGCGTACATCAAG ATGGTCGAGGAGCTGTCCGCGAAGTACGTCTAAACGGACGGTGGCGCTAAGCAAATTGCC AGACGGACAAACGGCGCTGGAGTTTAATACACATTCGGTTCGGTACTTTTGTTTCTACAA CTATAAAAACGAGGGCCTGAGCAGTTCCTTACCGTGGTGATCCTGTATTCTTCCTCGGAC GCTTCGCGAGTGTTTAGTTTTATTGTTTTCTGTTATCAGTTTCTGTTTTTTGTATGTTTC GGGGGCACCTTGGAGCGATTCGTTTGCTTATCGATCGAGGAGAGAATACGGTAAGGTTTT GCACCATACGTTAGCTAACGGGTGGGAAGATAACAACCAAAAATGTTGAT



consensusID : consensus_8945#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 605
fasta sequence
                              [CCGCGGACGCGTGGGCGGACGCGTGGGGGCCGTTACATCATCTGATCTTCGCCCGCCCAGCCCTTCCCAGACATGGAGCAGAAATTCAACGAATCCGCCGAGAAGGTGAAGAGCTTCACCAAGCGACCGAGCGACGCGGAGCTGCTGGAGCTGTACGCACTGTTCAAGCAGGCGACGGTCGGCGACAACGAAACCGAGAAGCCCGGCATGTTCGATCTGAAGGGCAAGGCCAAATGGCAGGCGTGGGCTGACCGGAAAGGCACCAGCAAGGAAGCGGCCATGGAAGCGTACATCAAGATGGTCGAGGAGCTGTCCGCGAAGTACGTCTAAACGGACGGTGGCGCTAAGCAAATTGCCAGACGGACAAACGGCGCTGGAGTTTAATACACATTCGGTTCGGTACTTTTGTTTCTACAACTATAAACATTCAAAAAAAAACTACTGGGGCCATAGCAGTTCCTTACCGTGGTGATCCTGTATTCTTCCTCGGACGCTTCGCGAGTGTTTAGTTGTATTGTTTTGTTATCAGGTTCTATTTTTTTTTTGTTTCGGGGGCACCTTGGAGCAATTCCTTTGCTTATCGATCGATGGGAGAATACGGTAAG]

[+] EMBL BM590554             [CCGCGGACGCGTGGGCGGACGCGTGGGGGCCGTTACATCATCTGATCTTCGCCCGCCCAGCCCTTCCCAGACATGGAGCAGAAATTCAACGAATCCGCCGAGAAGGTGAAGAGCTTCACCAAGCGACCGAGCGACGCGGAGCTGCTGGAGCTGTACGCACTGTTCAAGCAGGCGACGGTCGGCGACAACGAAACCGAGAAGCCCGGCATGTTCGATCTGAAGGGCAAGGCCAAATGGCAGGCGTGGGCTGACCGGAAAGGCACCAGCAAGGAAGCGGCCATGGAAGCGTACATCAAGATGGTCGAGGAGCTGTCCGCGAAGTACGTCTAAACGGACGGTGGCGCTAAGCAAATTGCCAGACGGACAAACGGCGCTGGAGTTTAATACACATTCGGTTCGGTACTTTTGTTTCTACAACTATAAACATTCAAAAAAAAACTACTGGGGCCATAGCAGTTCCTTACCGTGGTGATCCTGTATTCTTCCTCGGACGCTTCGCGAGTGTTTAGTTGTATTGTTTTGTTATCAGGTTCTATTTTTTTTTTGTTTCGGGGGCACCTTGGAGCAATTCCTTTGCTTATCGATCGATGGGAGAATACGGTAAG]


>consensus_8945#2 CCGCGGACGCGTGGGCGGACGCGTGGGGGCCGTTACATCATCTGATCTTCGCCCGCCCAG CCCTTCCCAGACATGGAGCAGAAATTCAACGAATCCGCCGAGAAGGTGAAGAGCTTCACC AAGCGACCGAGCGACGCGGAGCTGCTGGAGCTGTACGCACTGTTCAAGCAGGCGACGGTC GGCGACAACGAAACCGAGAAGCCCGGCATGTTCGATCTGAAGGGCAAGGCCAAATGGCAG GCGTGGGCTGACCGGAAAGGCACCAGCAAGGAAGCGGCCATGGAAGCGTACATCAAGATG GTCGAGGAGCTGTCCGCGAAGTACGTCTAAACGGACGGTGGCGCTAAGCAAATTGCCAGA CGGACAAACGGCGCTGGAGTTTAATACACATTCGGTTCGGTACTTTTGTTTCTACAACTA TAAACATTCAAAAAAAAACTACTGGGGCCATAGCAGTTCCTTACCGTGGTGATCCTGTAT TCTTCCTCGGACGCTTCGCGAGTGTTTAGTTGTATTGTTTTGTTATCAGGTTCTATTTTT TTTTTGTTTCGGGGGCACCTTGGAGCAATTCCTTTGCTTATCGATCGATGGGAGAATACG GTAAG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8945#0      GAATCGCCCCGAGGTCCGCAGCGTTTGAGCAAAAGTCACAGGCCGTTACATCATCTGATC 60
consensus_8945#1      --------CCGCGGACC--AGCGTTTGAGCAAAAGTCACAGGCCGTTACATCATCTGATC 50
consensus_8945#2      --------CCGCGGAC----GCGTGGGCGGACGCGT-GGGGGCCGTTACATCATCTGATC 47
                              *** ** *    ****  * * *   **    ********************

consensus_8945#0      TTCGCCCGCCCAGCCCTTCCCAGACATGGAGCAGAAATTCAACGAATCCGCCGAGAAGGT 120
consensus_8945#1      TTCGCCCGCCCAGCCCTTCCCAGACATGGAGCAGAAATTCAACGAATCCGCCGAGAAGGT 110
consensus_8945#2      TTCGCCCGCCCAGCCCTTCCCAGACATGGAGCAGAAATTCAACGAATCCGCCGAGAAGGT 107
                      ************************************************************

consensus_8945#0      GAAGAGCTTCACCAAGCGACCGAGCGACGCGGAGCTGCTGGAGCTGTACGCACTGTTCAA 180
consensus_8945#1      GAAGAGCTTCACCAAGCGACCGAGCGACGCGGAGCTGCTGGAGCTGTACGCACTGTTCAA 170
consensus_8945#2      GAAGAGCTTCACCAAGCGACCGAGCGACGCGGAGCTGCTGGAGCTGTACGCACTGTTCAA 167
                      ************************************************************

consensus_8945#0      GCAGGCGACGGTCGGCGACAACGAAACCGAGAAGCCCGGCATGTTCGATCTGAAGGGCAA 240
consensus_8945#1      GCAGGCGACGGTCGGCGACAACGAAACCGAGAAGCCCGGCATGTTCGATCTGAAGGGCAA 230
consensus_8945#2      GCAGGCGACGGTCGGCGACAACGAAACCGAGAAGCCCGGCATGTTCGATCTGAAGGGCAA 227
                      ************************************************************

consensus_8945#0      GGCCAAATGGCAGGCGTGGGCTGACCGGAAAGGCACCAGCAAGGAAGCGGCCATGGAAGC 300
consensus_8945#1      GGCCAAATGGCAGGCGTGGGCTGACCGGAAGGGCACCAGCAAGGAAGCGGCCATGGAAGC 290
consensus_8945#2      GGCCAAATGGCAGGCGTGGGCTGACCGGAAAGGCACCAGCAAGGAAGCGGCCATGGAAGC 287
                      ****************************** *****************************

consensus_8945#0      GTACATCAAGATGGTCGAGGAGCTGTCCGCGAAGTACGTCTAAACGGACGGTGGCGCTAA 360
consensus_8945#1      GTACATCAAGATGGTCGAGGAGCTGTCCGCGAAGTACGTCTAAACGGACGGTGGCGCTAA 350
consensus_8945#2      GTACATCAAGATGGTCGAGGAGCTGTCCGCGAAGTACGTCTAAACGGACGGTGGCGCTAA 347
                      ************************************************************

consensus_8945#0      GCAAATTGCCAGACGGACAAACGGCGCTGGAGTTTAATACACATTCGGTTCGGTACTTTT 420
consensus_8945#1      GCAAATTGCCAGACGGACAAACGGCGCTGGAGTTTAATACACATTCGGTTCGGTACTTTT 410
consensus_8945#2      GCAAATTGCCAGACGGACAAACGGCGCTGGAGTTTAATACACATTCGGTTCGGTACTTTT 407
                      ************************************************************

consensus_8945#0      GTTTCTACAACTATAAACATTCAAAAAAAAACTACTGGGGCCATAGCAGTTCCTTACCGT 480
consensus_8945#1      GTTTCTACAACTATAAAAA---------------CGAGGGCCTGAGCAGTTCCTTACCGT 455
consensus_8945#2      GTTTCTACAACTATAAACATTCAAAAAAAAACTACTGGGGCCATAGCAGTTCCTTACCGT 467
                      ***************** *               *  *****  ****************

consensus_8945#0      GGTGATCCTGTATTCTTCCTCGGACGCTTCGCGAGTGTTTAGTTGTATTGTTTT--GTTA 538
consensus_8945#1      GGTGATCCTGTATTCTTCCTCGGACGCTTCGCGAGTGTTTAGTTTTATTGTTTTCTGTTA 515
consensus_8945#2      GGTGATCCTGTATTCTTCCTCGGACGCTTCGCGAGTGTTTAGTTGTATTGTTTT--GTTA 525
                      ******************************************** *********  ****

consensus_8945#0      TCAGTTTCTATTTTTTTTTTGTTTCGGGGGCACCTTGGAGCAATTCGTTTGCTTATCGAT 598
consensus_8945#1      TCAGTTTCTGTTTTTTGTATGTTTCGGGGGCACCTTGGAGCGATTCGTTTGCTTATCGAT 575
consensus_8945#2      TCAGGTTCTATTTTTTTTTTGTTTCGGGGGCACCTTGGAGCAATTCCTTTGCTTATCGAT 585
                      **** **** ****** * ********************** **** *************

consensus_8945#0      CGAGGGGAGAATACGGTAAGGTTTTGCACCATACGTTAGCTAACGGGTGGGAAGATAACA 658
consensus_8945#1      CGAGGAGAGAATACGGTAAGGTTTTGCACCATACGTTAGCTAACGGGTGGGAAGATAACA 635
consensus_8945#2      CGATGGGAGAATACGGTAAG---------------------------------------- 605
                      *** * **************                                        

consensus_8945#0      ACCAAAAATGTTGATACAGGGTTGAGTAAGCTTACAAATTAATAAAGTGAAATGTTTTAC 718
consensus_8945#1      ACCAAAAATGTTGAT--------------------------------------------- 650
consensus_8945#2      ------------------------------------------------------------
                                                                                  

consensus_8945#0      TAAAAAAAA 727
consensus_8945#1      ---------
consensus_8945#2      ---------
                               




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)