cluster # 8978

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Anopheles gambiae
cluster # 8978 cluster # 8978 Sequences # 13 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8978#0 length = 1455 sequences # 7

consensus_8978#1 length = 841 sequences # 5
consensus_8978#2 length = 575 sequences # 1

consensusID : consensus_8978#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1455
fasta sequence

                              [ACAGTATTTAAAGATATTTGTTTTATTTTCTGATTTTCACTGGTGGTAAAAATATACAAATTGGAATAAACAAAGACCAATGCCGTTGAAGATCACACCGTTTGTCGGAAGGCCAGAACTTGCAACAGTTATTCCATTCGATATTCCACGGTCCTGGATGGAAGTCTGGTGGATGACCCAATGTGCGATGAAGAAAGTTTCACTGACTTTGAGCCTAGTTAAGC-TACAAAGAATATCATGCACCTTCTTTAAGATGCGGGTAATTAATTTTATATTACAGCAACTTCCAGTCAAAATCTATGGATTATTATAGCGTGTACGTT--CAAAAAGTCGGAGACATCCATTCCACCAGAAAACAGTTCCTCTTCAAATGATGAGGACCACTAAATGTGAGTGTGAGGGCGAGATCTTAGGGGGATTCGCAACAGTTTCCTTCGTGAATGATTTTTCCTTATGTTTGCTCCGGTTTTAGAAACTTCCCCTGGACAAATATTCTTGGCACATCGATATTTTCCTTTGGGTTTACCGTGCGCCGATGAATGTAGCTGTTCACCATCACCGTAAAGCCGGTCTGGCAGAACAATTTCGATACTTCCTCCTCGGCAAAGTAGTAGCTTCTCGTACCGTCCTGTCGCATGTAGAAATTTTCCGCTATCTTATGCCCTGGCTTGAACCGTAACTGAGCCATATCGTACAGG-CCGTAATCGCGGAACAGCACAACCCCTCCCGGCTTCAACAGTCGGTAAATATTGGCCACCGTCGATTGGAACTTTTCCGGATGTATAGCGGACAGTACGAAGATCAGCGTAACTATGTCCAGGCTGGCCTCGGGTAGCGTCTGGAACACTTCCTCCGTCGTGATGTCGCAGGCGAACGCTTTCATGTACCGCTCATCGTACAGGTTATGTTTCCGCACCAGCTCCACGGCACGTGGT-GACAGATCACACGCATAGATGAAGTAGTCACGATGCCCGTCTTCGATTAGAGGAAATATTAAATTCCCAACACCGCACCCAATTTCTAGCAGCTTCTTCTCAACGCTTATCCTTTCCACGTTGTCCGGCTTGGCCAGTGGCGAGGAGCTAGCAGCGGCTGCCGGATCTTCACCCGCCAGCAGCTCGCTAAACTCACGCGTCGTCCAGTGGCGATCTTTGAAGAACCGGTTTTCATTTCGCTTGTAGAACAAATCCCAATGCTTGCGG-GCCTCTTGCTCTAATTTCAGAGCTTGGAATGGCGTCACCAGGCGTTTGTTCTGCTCCTCCAATTTGGTCCTTTCCTCCTCGGTGAGAATTTTGGCCGCATCGGTCACAACGTCACCCAGATTGAAAGCCTTTTGCTTGGGAAACCGATCCACAGTTTTGGAATCAACAGGCTCATCCATTCTTAAAATGCCAGTGTCACCTATTCATTTGTTTCGTGCAAACATCTTCGGCACCTGAGTTCAGCAATTGCCAT]

[-] EMBL BM603719             [ACAGTATTTAAAGATATTTGTTTTATTTTCTGATTTTCACTGGTGGTAAAAATATACAAATTGGAATAAACAAAGACCAATGCCGTTGAAGATCACACCGTTTGTCGGAAGGCCAGAACTTGCAACAGTTATTCCATTCCATATTCCACGGTCCTGGATGGAAGTCTGGTGGATGACCCAATGTGCGATGAAGAAAGTTTCACTGACTTTGAGCCTAGTTAAGC TACAAAGAATATCATGCACCTTCTTTAAGATGCCGGTTATT ATTTTATACTTCAGCAACTTCCGGTCAAAATCTATGGATTATTATAGCGTGTACGCTCCCGGGAGGCCGGGAACATCCATTCCACCAGAAAACAGTTCCTCTTCAAATGATGCGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CNS09FTV             [                               GATTTTCACTGGTGGTAAAAATATACAAATTGGAATAAACAAAGACCAATGCCGTTGAAGATCACACCGTTTCTCGGAAGGCCAGAACTTGCAACAGTTATTCCATTCGATATTCCACGGTCCTGGATGGAAGTCTGGTGGATGACCCAATGTGCGATGAAGAAAGTTTCACTGACTTTGAGCCTAGTTAAGC TACAAAGAATATCATGCACCTTCTTTAAGATACGGGTAATTAATTTTATATTACAGCAACTTCCAGTCAAAATCTTTGGATTATTATAGCGTGTACGTT  CTAAAAGTCGGAGACATCCATTCCACCAGAAAACAGTTCCTCTTCAAATGATGAGGACCACTAAATGTGAGTGTGAGGGCGAGATCTTAGGGGGATTCGCAACAGTTTCCTTCGTGAATGATTTTTCCTTATGTTTGCTCCGGTTTTAGAAACTTCCCCTGGACAAATATTCTTGGCACATCGATATTTTCCTTTGGGTTTACCGTGCGCCGATGAATGTAGCTGTTCACCATCACCGTAAAGCCGGTCTGGCAGAACAATTTCGATACTTCCTCCTCGGCAAAGTAGTAGCTTCTCGTACCGTCCTGTCGCATGTAGAAATTTTCCGCTATCTTATGCCCTGGCTTGAACCGTAACTGAGCCATATCGTACAGGCCCGTAATCGCGGAACAGCACAACCCCTCCCGGCTTCAACAGCCGGTAAATGTTGGCCACCGTCGATTGGAACTTTTCCGGATGTATAGCGGACAGTACGAAGATCAGCGTAACTATGTCCAGGCTGGCCTCGGGTAGCGTCTGGAACACTTCCTCCGTCGTGATGTCGCAGGCGAACGCTTTCATGTACCGCTCATCGTACAGGTTATGTTTCCGCACCAGCTCCACGGCACG GGTGGACAGATCACACGCATAGATGAAGTAGTCACGATGCCCGTCTTCGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL BX614183             [                                  TTTCACTGGTGGTAAAAATATACAAATTGGAATAAACAAAGACCAATGCCGTTGAAGATCACACCGTTTGTCGGAAGGCCAGAACTTGCAACAGTTATTCCATTCGATATTCCACGCTCCTGGATGGAAGTCTGGTGGATGACCCAATGTGCGATGAAGAAAGTTTCACTGACTTCGAGCCTAGTTAAGC TACAAAGTATATCATGCACCTTCTTTAGGATATGGGTAATTAATTTTATATTACAGCAACTTCCAGTCAAAATCTATGGATTATTATAGCGTGTACGTT  CAAAAAGTCGGAGACATCCATTCCACCAGAAAACAGTTCCTCTTCAAATGATGAGGACCACTAAATGTGAGTGTGAGGGCGAGATCTTGGGGGGATTCGCAACAGTTTCCTTCGTGAATGATTTTTCCTTATGTTTGCTCCGGTTTTAGAAACTTCCCCTGGACAAATATTCTTGGCACATCGATATTTTCCTTTGGGTTTACCGTGCGCCGATGAATGTAGCTGTTCACCATCACCTTAAAGCCGGTCTGGCAGAACAATTTCGATACTTCCTCCTCGGCAAAGTAGTAACTTCTCGTACCGTCCTGTCGCATGTAGAAATTTTCCGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CNS090JS             [                                                                                                                                                                                                                          ccAAGCGTACAAAGTATATAATGCACCTTCTTTAAGATGCGGGTAATTAATTTTATATTACATTTACTTCCAGTCAAAATCTATGGGTTATTATAGCGTGTACGTT  CAAAAAGTCGGAGACATCCATTCCACCAGAAAACAGTTCCTCTTCAAATGATGAGGATCACTGAAAGTGAGTGTGAGAACGAGCACTTTGGGGGCTTCGAAAGAAATTTCTTCGTGAATGATTTTTCCTTATGTTTGCTCCGGTTTTAGAAACTTCCCCTGGACAAATATTCTTGGCACATCGATATTTTCCTTTGGGTTTACCGTGCGCCGATGAATGTAGCTGTTCACCATCACCGTAAAACCGGTCTGGCAGAACAATTTCGATACTTCCTCCTCGGCAAAGTAGTAGCTTCTCGTACCGTCCTGTCGCATGTAGAAATTTTCCGCTATCTTATGCCCTGGCTTGAACCGTAACTGAGCCATATCGTACAGG CCGTAATCGCGGAACAGCACAACCCCTCCCGGCTTCAACAGTCGGTAAATATTGGCCACCGTCGATTGGAACTTTTCCGGATGTATAGCGGACAGTACGAAGATCAGCGTAACTATGTCCAGGCTGGCCTCGGGTAGCGTCTGGAACACTTCCTCCGTCGTGATGTCGCAGGCGAACGCTTTCATGTACCGCTCATCGTACAGGTTATGTTTCCGTACCAGCTCCAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL BM622725             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    CTGGACAAATATTCTTGGCACATCGATATTTTCCTTTGGGTTTACCGTGCGCCGATGAATGTAGCTGTTCACCATCACCGTAAAGCCGGTCTGGCAGAACAATTTCGATACTTCCTCCTCGGCAAAGTAGTAGCTTCTCGTACCGTCCTGTCGCATGTAGAAATTTTCCGCTATCTTATGCCCTGGCTTGAACCGTAACTGAGCCATATCGTACAGG CCGTAATCGCGGAACAGCACAACCCCTCCCGGCTTCAACAGTCGGTAAATATTGGCCACCGTCGATTGGAACTTTTCCGGATGTATAGCGGACAGTACGAAGATCAGCGTAACTATGTCCAGGCTGGCCTCGGGTAGCGTCTGGAACACTTCCTCCGTCGTGATGTCGCAGGCGAACGCTTTCATGTACCGCTCATCGTACAGGTTATGTTTCCGCACCAGCTCCACGGCACGTGGT GACAGATCACACGCATAGATGAAGTAGTCACGATGCCCGTCTTCGATTAGAGGAAATATTAAATTCCCAACACCGCACCCAATTTCTAGCAGCTTTTTATCAACGCTTATCCTTTCCACGTTGTCCGGCTTGGCCAGTGGCGAGGAGCTAGCAGCGGCTGCCGGATCTTCACCCGCCAGCAGCTCGCTAAACTCACcgg                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CNS09FTU             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TTTGGGTTTACCGTGCGCCGATGAATGTAGCTGTTCACCATCACCGTAAAGCCGGTCTGGCAGAACAATTTCGATACTTCCTCCTCGGCAAAGTAGTAGCTTCTCGTACCGTCCTGTCGCATGTAGAAATTTTCCGCTATCTTATGCCCTGGCTTGAACCGTAACTGAGCCATATCGTACAGG CCGTAATCGCGGAACAGCACAACCCCTCCCGGCTTCAACAGCCGGTAAATGTTGGCCACCGTCGATTGGAACTTTTCCGGATGTATAGCGGACAGTACGAAGATCAGCGTAACTATGTCCAGGCTGGCCTCGGGTAGCGTCTGGAACACTTCCTCCGTCGTGATGTCGCAGGCGAACGCTTTCATGTACCGCTCATCGTACAGGTTATGTTTCCGCACCAGCTCCACGGCACGTGGT GACAGATCACACGCATAGATGAAGTAGTCACGATGCCCGTCTTCGATTAGGGGAAATATTAAATTTCCAACACCACACCCAATTTCTAGCAGCTTCTTCTCAACGCTTATCCTTTCCACGTTGTCCGGCTTGGCCAGTGGCGAGGAGCTAGCAGCGGCTGCCGGATCTTCACCCGCCAGCAGCTCGCTAAACTCACGCGTCGTCCAGTGGCGATCTTTGAAGAACCGGTTTTCATTTCGCTTGTAGAACAAATCCCAATGCTTGCGG GCCTCTTGCTCTAATTTCAGAGCTTGGAATGGCGTCACCAGGCGTTTGTTCTGCTCCTCCAATTTGGTCCTTTCCTCCTCGGTGAGAATTTTGGCCGCATCGGTCACAACGTCACCCAGATTGAAAGCCTTTTGCTTGGGAAACCGATCCACAGTTTTGGAATCAACAGGCTCATCCATTCTTAAAATGCCAGTGTCACCTATTCATTTGTTTCGTGCAAACATCTTCGGCACCTGAGTTCAGCAATTGCCAT]
[-] EMBL CNS090JR             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        CGATGAATGTAGCTGTTCACCATCACCGTAAAACCGGTCTGGCAGAACAATTTCGATACTTCCTCCTCGGCAAAGTAGTAGCTTCTCGTACCGTCCTGTCGCATGTAGAAATTTTCCGCTATCTTATGCCCTGGCTTGAACCGTAACTGAGCCATATCGTACAGG CCGTAATCGCGGAACAGCACAACCCCTCCCGGCTTCAACAGTCGGTAAATATTGGCCACCGTCGATTGGAACTTTTCCGGATGTATAGCGGACAGTACGAAGATCAGCGTAACTATGTCCAGGCTGGCCTCGGGTAGCGTCTGGAACACTTCCTCCGTCGTGATGTCGCAGGCGAACGCTTTCATGTACCGCTCATCGTACAGGTTATGTTTCCGTACCAGCTCCACGGCACGTGGT GACAGATCACACGCATAGATGAAGTAGTCACGATGCCCGTCTTCGATTAGAGGAAATATTAAATTCCCAACACCGCACCCAACTTCTAGCAGCTTCTTCTCAACGCTTATCCTTTCCACGTTGTCCGGCTTGGCCAGTGGCGAGGAGCTAGCAGCGGCTGCCGGATCTTCACCCGCCAGCAGCTCGCTAAACTCACGCGTCGTCCAGTGGCGATCTTTGAAGAACCGGTTTTCATTTCGCTTGTAGAACAAATCCCAATGCTTGCGGAAAAAATTGCTCTAATTTCAGCGCTTGAAATGGCGTCACCAGGCGTTTGTTCTACTCCTCCA                                                                                                                                                                                                ]




>consensus_8978#0
ACAGTATTTAAAGATATTTGTTTTATTTTCTGATTTTCACTGGTGGTAAAAATATACAAA
TTGGAATAAACAAAGACCAATGCCGTTGAAGATCACACCGTTTGTCGGAAGGCCAGAACT
TGCAACAGTTATTCCATTCGATATTCCACGGTCCTGGATGGAAGTCTGGTGGATGACCCA
ATGTGCGATGAAGAAAGTTTCACTGACTTTGAGCCTAGTTAAGCTACAAAGAATATCATG
CACCTTCTTTAAGATGCGGGTAATTAATTTTATATTACAGCAACTTCCAGTCAAAATCTA
TGGATTATTATAGCGTGTACGTTCAAAAAGTCGGAGACATCCATTCCACCAGAAAACAGT
TCCTCTTCAAATGATGAGGACCACTAAATGTGAGTGTGAGGGCGAGATCTTAGGGGGATT
CGCAACAGTTTCCTTCGTGAATGATTTTTCCTTATGTTTGCTCCGGTTTTAGAAACTTCC
CCTGGACAAATATTCTTGGCACATCGATATTTTCCTTTGGGTTTACCGTGCGCCGATGAA
TGTAGCTGTTCACCATCACCGTAAAGCCGGTCTGGCAGAACAATTTCGATACTTCCTCCT
CGGCAAAGTAGTAGCTTCTCGTACCGTCCTGTCGCATGTAGAAATTTTCCGCTATCTTAT
GCCCTGGCTTGAACCGTAACTGAGCCATATCGTACAGGCCGTAATCGCGGAACAGCACAA
CCCCTCCCGGCTTCAACAGTCGGTAAATATTGGCCACCGTCGATTGGAACTTTTCCGGAT
GTATAGCGGACAGTACGAAGATCAGCGTAACTATGTCCAGGCTGGCCTCGGGTAGCGTCT
GGAACACTTCCTCCGTCGTGATGTCGCAGGCGAACGCTTTCATGTACCGCTCATCGTACA
GGTTATGTTTCCGCACCAGCTCCACGGCACGTGGTGACAGATCACACGCATAGATGAAGT
AGTCACGATGCCCGTCTTCGATTAGAGGAAATATTAAATTCCCAACACCGCACCCAATTT
CTAGCAGCTTCTTCTCAACGCTTATCCTTTCCACGTTGTCCGGCTTGGCCAGTGGCGAGG
AGCTAGCAGCGGCTGCCGGATCTTCACCCGCCAGCAGCTCGCTAAACTCACGCGTCGTCC
AGTGGCGATCTTTGAAGAACCGGTTTTCATTTCGCTTGTAGAACAAATCCCAATGCTTGC
GGGCCTCTTGCTCTAATTTCAGAGCTTGGAATGGCGTCACCAGGCGTTTGTTCTGCTCCT
CCAATTTGGTCCTTTCCTCCTCGGTGAGAATTTTGGCCGCATCGGTCACAACGTCACCCA
GATTGAAAGCCTTTTGCTTGGGAAACCGATCCACAGTTTTGGAATCAACAGGCTCATCCA
TTCTTAAAATGCCAGTGTCACCTATTCATTTGTTTCGTGCAAACATCTTCGGCACCTGAG
TTCAGCAATTGCCAT

consensusID : consensus_8978#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 841
fasta sequence

                              [NGTAACTGAGCCATATCGTACAGNCNGTAATCGCGGAACAGCACAACCCCTCCCGGGCTTCAACAGTCGGTAAATATTGGCCACCGTCGATTGGAACTTTTCCGGATGTATAGCGGACAGTACGAAGATCAGCGTAACTATGTCCAGGCTGGCCTCGGGTAGCGTCTGGAACACTTCCTCCGTCGTGATGTCGCAGGCGAACGCTTTCATGTACCGCTCATCGTACAGGTTATGTTTCCGCACCAGCTCCACGGCACGTGGTGACAGATCACACGCATAGATGAAGTAGTCACGATGCCCGTCTTCGATTAGAGGAAATATTAAATTCCCAACACCGCACCCAATTTCTAGCAGCTTCTTCTCAACGCTTATCCTTTCCACGTTGTCCGGCTTGGCCAGTGGCGAGGAGCTAGCAGCGGCTGCCGGATCTTCACCCGCCAGCAGCTCGCTAAATTCACGCGTCGTCCAGTGGCGATCTTTGAAGAACCGGTTTTCATTTCGCTTGTAGAACAAATCCCAATGCTTGCGGGCCTCTTGCTCTAATTTCAGCGCTTGGAATGGCGTCACCAGGCGTTTGTTCTGCTCCTCCAATTTGGTCCTTTCCTCCTCGGTGAGAATTTTGGCCGCATCGGTCACAACGTCACCCAGATTGAAAGCCTTTTGCTTGGGAAACCGATCCACGCTCGATGGATCCACAGTTTTGGAATCAACAGGCTCGTCCATTCTTAAAATGCCAGTGTCACCTATTCACAGATTTCCAGCAAACACTTCGGCACCTGAGTTCAGCAATTGCCATTAGAAATAAACTGATACACGTCCTTCTTCCCCCACGCGTCCGCGG]

[-] EMBL BX623532             [NGTAACTGAGCCATATCGTACAGNCNGTAATCGCGGAACAGCACAACCCCTCCCGGGCTTCAACAGTCGGTAAATATTGGCCACCGTCGATTGGAACTTTTCCGGATGTATAGCGGACAGTACGAAGATCAGCGTAACTATGTCCAGGCTGGCCTCGGGTAGCGTCTGGAACACTTCCTCCGTCGTGATGTCGCAGGCGAACGCTTTCATGTACCGCTCATCGTACAGGTTATGTTTCCGTACCAGCTCCACGGCACGTGGTGACAGATCACACGCATAGATGAAGTAGTCACGATGCCCGTCTTCGATTAGAGGAAATATTAAATTCCCAACACCGCACCCAACTTCTAGCAGCTTCTTCTCAACGCTTATCCTTTCCACGTTGTCCGGCTTGGCCAGTGGCGAGGAGCTAGCAGCGGCTGCCGGATCTTCACCCGCCAGCAGCTCGCTAAACTCACGCGTCGTCCAGTGGCGATCTTTGAAGAACCGGTTTTCATTTCGCTTGTAGAACAAATCCCAATGCTTGCGGGCCTCTTGCTCTAATTTCAGCGCTTGGAATGGCGTCACCAGGCGTTTGTTCTGCTCCTCCAATTTGGTTCTTTCCTCCTCGGTGAGAATTTTGGCCGCATCGGTCACAACGTCACCCAGATTGAAAGCCTTTTGCTTGGGAAACCGATCCACGCTCGATGGATCCACAGTTTTGGAATCAACAGGCTCGTCCATTCTGAAGTTGCCAGTGTCACCTATTCACAGATTTCCAGCAAACACTTCGGCACC                                                                ]
[-] EMBL BX607018             [                                                                        AATGTTGGCCACCGTCGATTGGAACTTTTCCGGATGTATAGCGGACAGTACGAAGATCAGCGTAACTATGTCCAGGCTGGCCTCGGGTAGCGTCTGGAACACTTCCTCCGTCGTGATGTCGCAGGCGAACGCTTTCATGTACCGCTCATCGTACAGGTTATGTTTCTGCACCAGCTCCACGGCACGTGGTGACAGATCACACGCATAGATGAAGTAGTCACGATGCCCGTCTTCGATTAGGGGAAATATTAAATTCCCAACACCGCACCCAATTTCTAGCAGCTTCTTCTCAACGCTTATCCTTTCCACGTTGTCCGGCTTGGCCAGTGGCGAGGAGCTAGCAGCGGCTGCCGGATCTTCACCCGCCAGCAGCTCGCTAAATTCACGCGTCGTCCAGTGGCGATCTTTGAAGAACCGGTTTTCATTTCGCTTGTAGAACAAATCCCAATGCTTGCGGGCCTCTTGCTCTAATTTCAGCGCTTGGAATGGCGTCACCAGGCGTTTGTTCTGCTCCTCCAATTTGGTCCTTTCCTCCTCGGTGAGAATTTTGGCCGCATCGGTCACAACGTCACCCAGATTGAAAGCCTTTTGCTTGGGAAACCGATCCACGCTCGATGGATCCACAGTTTTGGAATCAACAGGCTCGTCCATTCTTAAAATGCCAGTGTCACCTATTCACAGATTTCCTGCAAACACTTCGGCACCTGAGTTCAGCAATTGCCATTAGAAATAGACTGATACACGTCCTTCTTC                ]
[-] EMBL BM600750             [                                                                                                                                                                                                                             CGTACAGGTTATGTTTCCGCACCAGCTCCACGGCACGTGGTGACAGATCACACGCATAGATGAAGTAGTCACGATGCCCGTCTTCGATTAGAGGAAATATTAAATTCCCAACACCGCACCCAATTTCTAGCAGCTTTTTATCAACGCTTATCCTTTCCACGTTGTCCGGCTTGGCCAGTGGCGAGGAGCTAGCAGCGGCTGCCGGATCTTCACCCGCCAGCAGCTCGCTAAACTCACGCGTCGTCCAGTGGCGATCTTTGAAGAACCGGTTTTCATTTCGCTTGTAGAACAAATCCCAATGCTTGCGGGCCTCTTGCTCTAATTTCAGAGCTTGGAATGGCGTCACCAGGCGTTTGTTCTGCTCCTCCAATTTGGTCCTTTCCTCCTCGGTGAGAATTTTGGCCGCATCGGTCACAACGTCACCCAGATTGAAAGCCTTTTGCTTGGGAAACCGATCCACGCTCGATGGATCCACAGTTTTGGAATCAACAGGCTCGTCCATTCTTAAAATGCCAGTGTCACCTATTCACAGATTTCCAGCAAACACTTCGGCACCTGAGTTCAGCAATTGCCATTAGAAATAAACTGATACACGTCCTTCTTCCCCCACGCGTCCGCGG]
[-] EMBL BX624137             [                                                                                                                                                                                                                                                                                        ATGAAGTAGTCACGATGCCCGTCTTCGATTAGGGGAAATATTAAATTCCCAACACCGCACCCAATTTCTAGCAGCTTCTTCTCAACGCTTATCCTTTCCACGTTGTCCGGCTTGGCCAGTGGCGAGGAGCTAGCAGCGGCTGCCGGATCTTCACCCGCCAGCAGCTCGCTAAATTCACGCGTCGTCCAGTGGCGATCTTTGAAGAACCGGTTTTCATTTCGCTTGTAGAACAAATCCCAATGCTTGCGGGCCTCTTGCTCTAATTTCAGCGCTTGGAATGGCGTCACCAGGCGTTTGTTCTGCTCCTCCAATTTGGTCCTTTCCTCCTCGGTGAGAATTTTGGCCGCATCGGTCACAACGTCACCCAGATTGAAAGCCTTTTGCTTGGGAAACCGATCCACGCTCGATGGATCCACAGTTTTGGAATCAACAGGCTCGTCCATTCTTAAAATGCCAGTGTCACCTATTCACAGATTTCCAGCAAACACTTCGGCACCTGAGTTCAGCAATTGCCATTAGAAATAAACTGATACACGTC                       ]
[-] EMBL BX604413             [                                                                                                                                                                                                                                                                                                                                                            TAGCAGCTTCTTCTCAACGCTTATCCTTTCCACGTTGTCCGGCTTGGCCAGTGGCGAGGAGCTAGCAGCGGCTGCCGGATCTTCACCCGCCAGCAGCTCGCTAAATTCACGCGTCGTCCAGTGGCGATCTTTGAAGAACCGGTTTTCATTTCGCTTGTAGAACAAATCCCAATGCTTGCGGGCCTCTTGCTCTAATTTCAGCGCTTGGAATGGCGTCACCAGGCGTTTGTTCTGCTCCTCCAATTTGGTCCTTTCCTCCTCGGTGAGAATTTTGGCCGCATCGGTCACAACGTCACCCAGATTGAAAGCCTTTTGCTTGGGAAACCGATCCACGCTCGATGGATCCACAGTTTTGGAATCAACAGGCTCGTCCATTCTTAAAATGCCAGTGTCACCTATTCACAGATTTCCAGCAAACACTTCGGCACCTGAGTTCAGCAATTGCCATTAGAAATAAACTGATACACGTC                       ]




>consensus_8978#1
NGTAACTGAGCCATATCGTACAGNCNGTAATCGCGGAACAGCACAACCCCTCCCGGGCTT
CAACAGTCGGTAAATATTGGCCACCGTCGATTGGAACTTTTCCGGATGTATAGCGGACAG
TACGAAGATCAGCGTAACTATGTCCAGGCTGGCCTCGGGTAGCGTCTGGAACACTTCCTC
CGTCGTGATGTCGCAGGCGAACGCTTTCATGTACCGCTCATCGTACAGGTTATGTTTCCG
CACCAGCTCCACGGCACGTGGTGACAGATCACACGCATAGATGAAGTAGTCACGATGCCC
GTCTTCGATTAGAGGAAATATTAAATTCCCAACACCGCACCCAATTTCTAGCAGCTTCTT
CTCAACGCTTATCCTTTCCACGTTGTCCGGCTTGGCCAGTGGCGAGGAGCTAGCAGCGGC
TGCCGGATCTTCACCCGCCAGCAGCTCGCTAAATTCACGCGTCGTCCAGTGGCGATCTTT
GAAGAACCGGTTTTCATTTCGCTTGTAGAACAAATCCCAATGCTTGCGGGCCTCTTGCTC
TAATTTCAGCGCTTGGAATGGCGTCACCAGGCGTTTGTTCTGCTCCTCCAATTTGGTCCT
TTCCTCCTCGGTGAGAATTTTGGCCGCATCGGTCACAACGTCACCCAGATTGAAAGCCTT
TTGCTTGGGAAACCGATCCACGCTCGATGGATCCACAGTTTTGGAATCAACAGGCTCGTC
CATTCTTAAAATGCCAGTGTCACCTATTCACAGATTTCCAGCAAACACTTCGGCACCTGA
GTTCAGCAATTGCCATTAGAAATAAACTGATACACGTCCTTCTTCCCCCACGCGTCCGCG
G

consensusID : consensus_8978#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 575
fasta sequence

                              [CCGGTTGCGAATCCCCCCAAGATCTCGCCCTCACACTCACATTTAGTGGTCCTCATCATTTGAAGAGGTATGTTCTGTATAAATTAACACATTAGATTCGCTATTCTTTTGAATGATGAATGTTCTGCACAAATATTTCAAGAATTCAATGATTGAATAATAAGAACGGCCAACTGAAGCATTTGCTTCTAGTAAACGATAATAAATGATTTTTGTGACGAGTCTAATCAAGTTTTTCCATTAATTTACATTACAGGAACTGTTTTCTGGTGGAATGGATGTCTCCGACTTTTTGAACGTACACGCTATAATAATCCATAGGTGAGGAAATAATCAAAATGCCATATAATTTATTAAAATTTTGCTTTACATGATGTTAAAATGTATCAGAAGAATAATGATCGATAATCACATTATTACGTTATAACCAAAAGGATGCTGAAACAATAGCAGCATTACAAAAATAGATTGTTTGTACCAAGGATGCAATTGGTGACGTTTTTGTATCGTTTTTATTTACAGATTTTGACTGGAAGTTGCTGTAATATAAAATTAATTACCCGCATCTTAAAGAA]

[+] EMBL BM612794             [CCGGTTGCGAATCCCCCCAAGATCTCGCCCTCACACTCACATTTAGTGGTCCTCATCATTTGAAGAGGTATGTTCTGTATAAATTAACACATTAGATTCGCTATTCTTTTGAATGATGAATGTTCTGCACAAATATTTCAAGAATTCAATGATTGAATAATAAGAACGGCCAACTGAAGCATTTGCTTCTAGTAAACGATAATAAATGATTTTTGTGACGAGTCTAATCAAGTTTTTCCATTAATTTACATTACAGGAACTGTTTTCTGGTGGAATGGATGTCTCCGACTTTTTGAACGTACACGCTATAATAATCCATAGGTGAGGAAATAATCAAAATGCCATATAATTTATTAAAATTTTGCTTTACATGATGTTAAAATGTATCAGAAGAATAATGATCGATAATCACATTATTACGTTATAACCAAAAGGATGCTGAAACAATAGCAGCATTACAAAAATAGATTGTTTGTACCAAGGATGCAATTGGTGACGTTTTTGTATCGTTTTTATTTACAGATTTTGACTGGAAGTTGCTGTAATATAAAATTAATTACCCGCATCTTAAAGAA]




>consensus_8978#2
CCGGTTGCGAATCCCCCCAAGATCTCGCCCTCACACTCACATTTAGTGGTCCTCATCATT
TGAAGAGGTATGTTCTGTATAAATTAACACATTAGATTCGCTATTCTTTTGAATGATGAA
TGTTCTGCACAAATATTTCAAGAATTCAATGATTGAATAATAAGAACGGCCAACTGAAGC
ATTTGCTTCTAGTAAACGATAATAAATGATTTTTGTGACGAGTCTAATCAAGTTTTTCCA
TTAATTTACATTACAGGAACTGTTTTCTGGTGGAATGGATGTCTCCGACTTTTTGAACGT
ACACGCTATAATAATCCATAGGTGAGGAAATAATCAAAATGCCATATAATTTATTAAAAT
TTTGCTTTACATGATGTTAAAATGTATCAGAAGAATAATGATCGATAATCACATTATTAC
GTTATAACCAAAAGGATGCTGAAACAATAGCAGCATTACAAAAATAGATTGTTTGTACCA
AGGATGCAATTGGTGACGTTTTTGTATCGTTTTTATTTACAGATTTTGACTGGAAGTTGC
TGTAATATAAAATTAATTACCCGCATCTTAAAGAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8978#0      ACAGTATTTAAAGATATTTGTTTTATTTTCTGATTTTCACTGGTGGTAAAAATATACAAA 60
consensus_8978#1      ------------------------------------------------------------
consensus_8978#2      ------------------------------------------------------------
                                                                                  

consensus_8978#0      TTGGAATAAACAAAGACCAATGCCGTTGAAGATCACACCGTTTGTCGGAAGGCCAGAACT 120
consensus_8978#1      ------------------------------------------------------------
consensus_8978#2      ------------------------------------------------------------
                                                                                  

consensus_8978#0      TGCAACAGTTATTCCATTCGATATTCCACGGTCCTGGATGGAAGTCTGGTGGATGACCCA 180
consensus_8978#1      ------------------------------------------------------------
consensus_8978#2      ------------------------------------------------------------
                                                                                  

consensus_8978#0      ATGTGCGATGAAGAAAGTTTCACTGACTTTGAGCCTAGTTAAGCTACAAAGAATATCATG 240
consensus_8978#1      ------------------------------------------------------------
consensus_8978#2      ------------------------------------------------------------
                                                                                  

consensus_8978#0      CACCTTCTTTAAGATGCGGGTAATTAATTTTATATTACAGCAACTTCCAGTCAAAATCTA 300
consensus_8978#1      ------------------------------------------------------------
consensus_8978#2      ------------------------------------------------------------
                                                                                  

consensus_8978#0      TGGATTATTATAGCGTGTACGTTCAAAAAGTCGGAGACATCCATTCCACCAGAAAACAGT 360
consensus_8978#1      ------------------------------------------------------------
consensus_8978#2      ------------------------------------------------------------
                                                                                  

consensus_8978#0      TCCTCTTCAAATGATGAGGACCACTAAATGTGAGTGTGAGGGCGAGATCTTAGGGGGATT 420
consensus_8978#1      ------------------------------------------------------------
consensus_8978#2      ------------------------------------------------------------
                                                                                  

consensus_8978#0      CGCAACAGTTTCCTTCGTGAATGATTTTTCCTTATGTTTGCTCCGGTTTTAGAAACTTCC 480
consensus_8978#1      ------------------------------------------------------------
consensus_8978#2      ------------------------------------------------------------
                                                                                  

consensus_8978#0      CCTGGACAAATATTCTTGGCACATCGATATTTTCCTTTGGGTTTACCGTGCGCCGATGAA 540
consensus_8978#1      ------------------------------------------------------------
consensus_8978#2      ------------------------------------------------------------
                                                                                  

consensus_8978#0      TGTAGCTGTTCACCATCACCGTAAAGCCGGTCTGGCAGAACAATTTCGATACTTCCTCCT 600
consensus_8978#1      ------------------------------------------------------------
consensus_8978#2      ------------------------------------------------------------
                                                                                  

consensus_8978#0      CGGCAAAGTAGTAGCTTCTCGTACCGTCCTGTCGCATGTAGAAATTTTCCGCTATCTTAT 660
consensus_8978#1      ------------------------------------------------------------
consensus_8978#2      ------------------------------------------------------------
                                                                                  

consensus_8978#0      GCCCTGGCTTGAACCGTAACTGAGCCATATCGTACAGGCCGTAATCGCGGAACAGCACAA 720
consensus_8978#1      --------------NGTAACTGAGCCATATCGTACAGNCNGTAATCGCGGAACAGCACAA 46
consensus_8978#2      ----------------------------------------CCGGTTGCGAATCCCCCCAA 20
                                                                  * *** * *  * ***

consensus_8978#0      CCCCTCCCGG-CTTCAACAGTCGGTAAATATTGGCCACCGTCGATTGGAACTTTTCCGGA 779
consensus_8978#1      CCCCTCCCGGGCTTCAACAGTCGGTAAATATTGGCCACCGTCGATTGGAACTTTTCCGGA 106
consensus_8978#2      GATCTCGC---CCTCA-CACTCA-CATTTAGTGGTCCTCATCATTTGAA---------GA 66
                         *** *   * *** ** **   *  ** *** *  * **  *** *         **

consensus_8978#0      TGTATAGCGGACAGTACGAAGATCAGCGTAACTATGTCCAGGCTGGCCTCGGGTAGCGTC 839
consensus_8978#1      TGTATAGCGGACAGTACGAAGATCAGCGTAACTATGTCCAGGCTGGCCTCGGGTAGCGTC 166
consensus_8978#2      GGTATGTT---CTGTATAAA--TTAACACA-TTAGATTCGCTATTCTTTTGAATGATGAA 120
                       ****      * ***  **  * * *  *  **  * *    *    * *  *   *  

consensus_8978#0      TGGAACACTTCCTCCGTCGTGATGTCGCAGGCGAACGCTTTCATGTACCGCTCATCGTAC 899
consensus_8978#1      TGGAACACTTCCTCCGTCGTGATGTCGCAGGCGAACGCTTTCATGTACCGCTCATCGTAC 226
consensus_8978#2      TG---------TTCTGCACAAATATTTCAAGAA-----TTCAATGATTGAATAATAAGAA 166
                      **          ** *     ** *  ** *       **  ***      * **   * 

consensus_8978#0      AGGTTATGTTTCCGCACCAGCTCCACGGCACGTGGTGACAGATCACACGCATAGATGAAG 959
consensus_8978#1      AGGTTATGTTTCCGCACCAGCTCCACGGCACGTGGTGACAGATCACACGCATAGATGAAG 286
consensus_8978#2      CGGCCA-ACTGAAGCATTTGCTTC-TAGTAAACGATAATAAATGATTTTTGTGACGAGTC 224
                       **  *   *   ***   *** *   * *   * * * * ** *      *        

consensus_8978#0      TAGTCACGATGCCCGTCTTCGATTAGAGGAAATATTAAATTCCCAACACCGCACCCAATT 1019
consensus_8978#1      TAGTCACGATGCCCGTCTTCGATTAGAGGAAATATTAAATTCCCAACACCGCACCCAATT 346
consensus_8978#2      TAATCAAGTT------TTTCCATTAAT-------TTACATTACAGGAACTGTTTTCTGGT 271
                      ** *** * *       *** ****         *** *** *    ** *    *   *

consensus_8978#0      TCTAGCAGCTTCTTCTCAACGCTTATCCTTTCCACGTTGTCCGGCTTGGCCAGTGGCGAG 1079
consensus_8978#1      TCTAGCAGCTTCTTCTCAACGCTTATCCTTTCCACGTTGTCCGGCTTGGCCAGTGGCGAG 406
consensus_8978#2      GGAATGGATGTCTC--CGACTTTTTGAACGTACACGCTAT---AATAATCCATAGGTGAG 326
                         *      ***   * **  **      * **** * *     *   ***  ** ***

consensus_8978#0      GAGCTAGCAGCGGCTGCCGGATCTTCACCCGCCAGCAGCTCGCTAAACTCACGCGTCGTC 1139
consensus_8978#1      GAGCTAGCAGCGGCTGCCGGATCTTCACCCGCCAGCAGCTCGCTAAATTCACGCGTCGTC 466
consensus_8978#2      GAAATAATCA-AAATGCCATA---TAATTTATTAAAATTTTGCT----TTACATGATGTT 378
                      **  **        ****  *   * *      *  *  * ***    * **  *  ** 

consensus_8978#0      CAGTGGCGATCTTTGAAGAACCGGTTTTCATTTCGCTTGTAGAACAAATCCCAATGCTTG 1199
consensus_8978#1      CAGTGGCGATCTTTGAAGAACCGGTTTTCATTTCGCTTGTAGAACAAATCCCAATGCTTG 526
consensus_8978#2      AAAATGTATCAGAAGAATAATGATCGATAATCACATTATTACGTTATAACCAAAAGGATG 438
                       *   *        *** **       * **  *  *  **    * * ** ** *  **

consensus_8978#0      CGGGCCTCTTGCTCTAATTTCAGAGCTTGGAATGGCGTCACCAGGCGTTTGTTCTGCTCC 1259
consensus_8978#1      CGGGCCTCTTGCTCTAATTTCAGCGCTTGGAATGGCGTCACCAGGCGTTTGTTCTGCTCC 586
consensus_8978#2      CTGAAACAATAGCAGCATTACAAAAAT-AGATTGTTTGTACCAAGGATGCAATTGGTGAC 497
                      * *      *      *** **    *  ** **     **** *  *    *  *   *

consensus_8978#0      TCCAATTTGGTCCTTTCCTCCTCGGTGAGAATTTTGGCCGCATCGGTCACAACGTCACCC 1319
consensus_8978#1      TCCAATTTGGTCCTTTCCTCCTCGGTGAGAATTTTGGCCGCATCGGTCACAACGTCACCC 646
consensus_8978#2      GTT--TTTGTATCGTTTTTATT---TACAGATTTTGACTGGA--AGTTGCTGTAATATA- 549
                           ****   * **  *  *   *    ****** * * *   **  *      *   

consensus_8978#0      AGATTGAAAGCCTTTTGCTTGGGAAACCGATCCAC---------------AGTTTTGGAA 1364
consensus_8978#1      AGATTGAAAGCCTTTTGCTTGGGAAACCGATCCACGCTCGATGGATCCACAGTTTTGGAA 706
consensus_8978#2      AAATTAATTACCCGCATCTTAAAGAA---------------------------------- 575
                      * *** *   **     ***    **                                  

consensus_8978#0      TCAACAGGCTCATCCATTCTTAAAATGCCAGTGTCACCTATTCATTTGTTTCGTGCAAAC 1424
consensus_8978#1      TCAACAGGCTCGTCCATTCTTAAAATGCCAGTGTCACCTATTCACAGATTTCCAGCAAAC 766
consensus_8978#2      ------------------------------------------------------------
                                                                                  

consensus_8978#0      ATCTTCGGCACCTGAGTTCAGCAATTGCCAT----------------------------- 1455
consensus_8978#1      A-CTTCGGCACCTGAGTTCAGCAATTGCCATTAGAAATAAACTGATACACGTCCTTCTTC 825
consensus_8978#2      ------------------------------------------------------------
                                                                                  

consensus_8978#0      ----------------
consensus_8978#1      CCCCACGCGTCCGCGG 841
consensus_8978#2      ----------------