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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8981#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1665 fasta sequence
[CCGCCCACGCGTCCGGCACTTTGTTATGCTTCGGGGGGTTGTTTCGTTCGCCTGATTCCGAGGACACCTTTTCTTGTCGC-ATTTGCTTGTGCAGTGTTGGTGTACTGCGTGTATTACGACGCCCTTGGTACGACGAGCGTGCAGTGTGACCATTCCATCCGGACGGCACAGCAGCAGCAGCAGCAGCAGACGCAACAGGAAGTGCAATTTTCCCTCCGAAGGATACAGTGAAACGCAGCGTAAATCATCGCATCCTAGATCGTGATCGCGAGAGCTCTCTCTCTCTCTCTTTTTACCCCATCCCCTGCCCCCGGAGAGCGTTGTTTAGAACAACGGCAAAAACATCTGTTTCGCGGAGGACGAACCCATACCGGTGGCCGGAGCAGTGCAACCGTTCGAACCGTGGAAAGGCACGGAACGGAACACGCTGAGAGCGGACAGCAGCGGACAGAAAACTCACGCGCGGTATAAAGCACGACCGCTGCCACGATGAGCCGGTTATTCGGTAGTAGTAGTGGTTCGGTGCTCGGCACGGCCGGAAGCAAAATGTCGTCGTTCCGCAAGGTGACTCACTGTATCTTCGACATGGACGGGCTGTTGCTTGATACGGAGAAGATCTACGAAAACATCTTGCGCGATCTGTTGAAATCGTACAACTCGCCGTACCCGTGGCCGACGCGCATGAAGGTGATGGGCACAACGGAACAGCGCACCTGCTCGATACTGGTGAACGATCTGAAGCTGCCCTGCTCGGTGGATGAGTTTCTGGCGCGATTCCGTCGTGATCAGTTGCTACACCTCGGCCAGGCGCCGCTAATGCAAGGTGCAGAGCGGCTGGTGCGCCATCTGCACCAACACAACGTGCCGATCGCGCTGGCCACCAGCTCGGGAGCGGATTCGGTCGAGGTGAAGACAAAGAACCACCGCGAGCTGTTCGAGCTGTTCGGGCACAAGGTGATGGGTTCGTCCGATCCCGACGTGAAGGAGGGTAAGCCGGCGCCCGATATCTTCCTGGTCGCAGCGGACCGCTTCCCGGACCGGCCCGCT-CCCGACCAGTGCCTGGTGTTTGAGGATGCGCCGAACGGTGTGACGGCAGCGATTGCGGCCGGCATGCAGGCCGTCATGGTGCCCGATCCGCACATCGAGGAGGACCAGCGGAAGCACGCGACGGTCGTGCTGAAATCACTCGAGGACTTCCATCCGGAACAGTTCGGTTTGCCGCCGTTTACGTCGTGAACCACTCGTGGGACGCTTTTGACGACTATCCTGGAGCCGGCCATTACTCCCCG-AAAAAAAAAAATGCTTACAACTACTACCACTACTACTACTACTACAACCGCATGCCGCAACGTAGTTGGTGTGTGCGGCACACGTCCGATTTTAGCAGAGCAGTGTTCTAAACACATCACCACCGTTGGAGCGAAATTTTGATGAAGCGTGCGCACGC-CAC-GTTTCGTTTGCGTAGAACGCACAAGCGTCCACCCCGAAAAAAGGGGCCACTGCCGGGTGGGACGGACGTTAGTTTGTATTTAGTTTTATTTTTCGGAAAGCTTTTTCTTTAGGTGCGCGATCGATGTGTATCGCTAGAATGTGAAATCGCTTGATTGAGCGCCCGTCAATGCGAACAAAAAAAGAAAAAAAAAGAAAATACAATGTGCTAATTGT]
[+] EMBL BM595629 [CCGCCCACGCGTCCGGCACTTTGTTATGCTTCGGGGGGTTGTTTCGTTCGCCTGATTCCGAGGACACCTTTTCTTGTCGC ATTTGCTTGTGCAGTGTTGGTGTACTGCGTGTATTACGACGCCCTTGGTACGACGAGCGTGCAGTGTGACCATTCCATCCGGACGGCACAGCAGCAGCAGCAGCAGCAGACGCAACAGGAAGTGCAATTTTCCCTCCGAAGGATACAGTGAAACGCAGCGTAAATCATCGCATCCTAGATCGTGATCGCGAGAGCTCTCTCTCTCTCTCTTTTTACCCCATCCCCTGCCCCCGGAGAGCGTTGTTTAGAACAACGGCAAAAACATCTGTTTCGCGGAGGACGAACCCATACCGGTGGCCGGAGCAGTGCAACCGTTCGAACCGTGGAAAGGCACGGAACGGAACACGCTGAGAGCGGACAGCAGCGGACAGAAAACTCACGCGCGG ]
[+] EMBL BM637556 [ taCGAGGACACCTTTTCTTGCCGCAATTTGCTTGTGCAGTGTTGGTGTAGTGCGTGTAGTACGACGCCCTTGGTACGACGAGCGTGCAGTGTGACCATTCCATCCGGACGGCACAGCAGCAGCAGCAGCAGCAGACGCAACAGGAAGTGCAATTTTCCCTCCGAAGGATACAGTGAAACGCAGCGTAAATCAGCGCATCCTAGATCGTGATCGCGAGAGCTCTCTCTCTCTCTCTTTTTACCCCAACCCCTGCCCCCGGCGAGCGTTGTTTAGAACAACGGCAAAAACATCTGTTTCGCGGAGGACGAATCCATACCGGTGGCCGGAGCAGTGCAACCGTTCGAACCGTGGGAAGGCACGGAACGGAACACGCTGAGAGCGGACAGCAGCGGACAGAAAACACACGCGCGGTATAAAGCACGACCGCTGCCACGATGAGCCGGTTATTCGGTAGTAGTAGTGGTTCGGTGCTCGGCACGGCCGGAAGCAAAATGTCGTCGTTCCGCAAGGTGACTCACTGTATCTTCGACATGGACGGGCTGTTGCTTGATACGGAGAAGATCTACGAAAACATCTTGC ]
[+] EMBL CNS08YOW [ AGTGGTTCGGTGCTCGGTACGGCCGGAAGCAAAATGTCGTCGTTCCGCAA GTGACTCACTGTATCTTCGACATGGACGGGCTGTTGCTTGATACGGAGAAGATCTACGAAAACATCTTGCGCGATCTGTTGAAATCGTACAACTCGCCGTACCCGTGGCCGACGCGCATGAAGGTGATGGGCACAACGGAACAGCGCACCTGCTCGATACTGGTGAACGATCTGAAGCTGCCCTGCTCGGTGGATGAGTTTCTGGCGCGATTCCGTCGTGATCAGTTGCTACACCTCGGCCAGGCGCCGCTAATGCAAGGTGCAGAGCGGCTGGTGCGCCATCTGCACCAACACAACGTGCCGATCGCGCTGGCCACCAGCTCGGGAGCGGATTCGGTCGAGGTGAAGACAAAGAACCACCGCGAGCTGTTCGAGCTGTTCGGGCACAAGGTGATGGGTTCGTCCGATCCCGACGTGAAGGAGGGTAAGCCGGCGCCCGATATCTTCCTGGTCGCAGCGGACCGCTTCCCGGACCGGCCCGCT CCCGACCAGTGCCTGGTGTTTGAGGATGCGCCGAACGGTGTGACGGCAGCGATTGCGGCCGGCATGCAGGCCGTCATGGTGCCCGATCCGCACATCGAGGAGGACCAGCGGAAGCACGCGACGGTCGTGCTGAAATCACTCGAGGACTTCCATCCGGAACAGTTCGGTTTGCCGCCGTTTACGTCGTGAACCACTCGTGGGACGCTTTTGACGACTATCCTGGAGCCGGCCATTACTCCCCG AAAAAAAAAAATGCTTACAACTACTACCACTACTACTACTACTACAACCGCATGCCGCAACGTAGTTGGTGTGTGCGGCACACGTCCGATTTTAGCAGAGCAGTGTTCTAAACACATCACCACCGTTGGAGCGAAATTTTGATGAAGCGTGCGCACGC CACGGTTTCGTTTGCGTAGAACGCACAAGCGTCCACCCCGAAAAAAGGGGCCACTGCCG ]
[+] EMBL CNS0991E [ CGCCGTA CCGTGGCCGACGCGCATGAAGGTGATGGGCACAACGGAACAGCGCACCTGCTCGATACTGGTGAACGATCTGAAGCTGCCCTGCTCGGTGGATGAGTTTCTGGCGCGATTCCGTCGTGATCAGTTGCTACACCTCGGCCAGGCGCCGCTAATGCAAGGTGCAGAGCGGCTGGTGCGCCATCTGCACCAACACAACGTGCCGATCGCGCTGGCCACCAGCTCGGGAGCGGATTCGGTCGAGGTGAAGACAAAGAACCACCGCGAGCTGTTCGAGCTGTTCGGGCACAAGGTGATGGGTTCGTCCGATCCCGACGTGAAGGAGGGTAAGCCGGCGCCCGATATCTTCCTGGTCGCAGCGGACCGCTTCCCGGACCGGCCCGCT CCCGACCAGTGCCTGGTGTTTGAGGATGCGCCGAACGGTGTGACGGCAGCGATTGCGGCCGGCATGCAGGCCGTCATGGTGCCCGATCCGCACATCGAGGAGGACCAGCGGAAGCACGCGACGGTCGTGCTGAAATCACTCGAGGACTTCCATCCGGAACAGTTCGGTTTGCCGCCGTTTACGTCGTGAACCACTCGTGGGACGCTTTTGACGACTATCCTGGAGCCGGCCATTACTCCCCG AAAAAAAAAAATGCTTACAACTACTACCACTACTACTACTACTACAACCGCATGCCGCAACGTATTTGGTGTGTTCGGCACACGTCCGATTTTAGCAGAGCAGTGTTCTAAACACATCACCACCGTTGGAGCGAAATTTTGATGAAGCGTGCGCACGA CAC GTTTCGTTTGCGTAGAACGCACAAGCGTCCACCCCGAAAAAAGGGGCCACTGCCGGGTGGGACGGACGTTAGTTTGTATTTAGTTTTATTTTTCGGAAAGCTTTTTCTTTAGGTGCG ]
[-] EMBL CNS08YOX [ GCCGTACCCGTGGCCGACGCGCATGAAGGTGATGGGCACAACGGAACAGCGCACCTGCTCGAAACTGGTGAACGATCTGAAGCTGCCCTGCTCGGTGGATGAGTTTCTGGCGCGATTCCGTCGTGATCAGTTGCTACACCTCGGCCAGGCGCCGCTAATGCAAGGTGCAGAGCGGCTGGTGCGCCATCTGCACCAACACAACGTGCCGATCGCGCTGGCCACCAGCTCGGGAGCGGATTCGGTCGAGGTGAAGACAAAGAACCACCGCGAGCTGTTCGAGCTGTTCGGGCACAAGGTGATGGGTTCGTCCGATCCCGACGTGAAGGAGGGTAAGCCGGCGCCCGATATCTTCCTGGTCGCAGCGGACCGCTTCCCGGACCGGCCCGCT CCCGA CAGTGCCTGGTGTTTGAGGATGCGCCGAACGGTGTGACGGCAGCGATTGCGGCCGGCATGCAGGCCGTCATGGTGCCCGATCCGCACATCGAGGAGGACCAGCGGAAGCACGCGACGGTCGTGCTGAAATCACTCGAGGACTTCCATCCGGAACAGTTCGGTTTGCCGCCGTTTACGTCGTGAACCACTCGTGGGACGCTTTTGACGACTATCCTGGAGCCGGCCATTACTCCCCG AAAAAAAAAAATGCTTACAACTACTACCACTACTACTACTACTACAACCGCATGCCGCAACGTAGTGTGTGTGTGCGGCACACGTCCGATTTTAGCAGAGCAGTGTTCTAAACACATCACCACCGTTGGAGCGAAATTTTGATGAAGCGTGCGCACGCACAC GTTTCGTTTGCGTAGAACGCACAAGCGTCCACCCCGAAAAAAGGGGCCACTGCCGGGTGGGACGGACGTTAGTTTGTATTTAGTTTTATTTTTCGGAAAGCTTTTTCTTTAGGTGCGCGATCGATGTGTATCGCTAGAATGTGAAATCGCTTGATTGAGCGCCCGTCAATGCGAACAAAAAAAGAAAAAAAAAGAA ]
[-] EMBL CNS092RR [ GCTGCCCTGCTCGGTGGATGAGTTTTTGGCGCGATTCCGTCGTGATCAGTTGCTACACCTCGGCCAGGCGCCGCTAATGCAAGGTGCAGAGCGGCTGGTGCGCCATCTGCACCAAAACAACGTGCCGATCGCGCTGGCCACCAGCTCGGGAGCGGATTCGGTCGAGGTGAAGACAAAGAACCACCGCGAGCTGTTCGAGCTGTTCGGGCACAAGGTGATGGGTTCGTCCGATCCCGACGTGAAGGAGGGTAAGCCGGCGCCCGATATCTTCCTGGTCGCAGCGGACCGCTTCCCGGACCGGCCCGCTCCCCGACCAGTGCCTGGTGTTTGAGGATGCGCCGAACGGTGTGACGGCAGCGATTGCGGCCGGCATGCAGGCCGTCATGGTGCCCGATCCGCACATCGAGGAGGACCAGCGGAAGCACGCGACGGTCGTGCTGAAATCACTCGAGGACTTCCATCCGGAACAGTTCGGTTTGCCGCCGTTTACGTCGTGAACCACTCGTGGGACGCTTTTGACGACTATCCTGGAGCCGGCCATTACCCCCCGAAAAAAAAAAAATGCTTACAACTACTACCACTACTACTACTACTACAACCGCATGCCGCAACGTAGTGTGTGTGTGCGGCACACGTCCGATTTTAGCAGAGCAGTGTTCTAAACACATCACCACCGTTGGAGCGAAATTTTGATGAAGCGTGCGCACGCACAC GTTTCGTTTGCGTAGAACGCACAAGCGTCCACCCCGAAAAAAGGGGCCACTGCCGGGTGGGACGGACGTTAGTTTGTATTTAGTTTTATTTTTCGGAAAGCTTTTTCTTTAGGTGCGCGATCGATGTGTATCGCTAGAATGTGAAATCGCTTGATTGAGCGCCCGTCAATGCGAACAAAAAAAGAAAAAAAAAGAAAATACAATGTGCTAATTGT]
consensusID : consensus_8981#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1251 fasta sequence
[AGAATCGCCCGAGGTTNTGCTGGGCTTTCAGACGTCGCTAGTGCCCGCGGTTTAGGTTGCTGCTCTAAGCTGTATCTAAGAAGACGTGCCTTCAGTGCAGTAGAACGATTCTGTGTGCGGTACACGACAGTGCACGTGCAGTGTCTTTAGGCTACAAAGTGAAACAGTGACTTCCTCCACCAACTACAACCCTCTCAACTCTCAACCTGTGTGTGGAACCTACCCTGTATCAGAGATATTCTTCATCCCGAATTCTGTCCTCAACCAACACACCTGATGTCTGCTGCTGTGCTGGAATGTCTGGAGCACCTGTCCCGCAGTTGGTGCGCCTGTTCTGGGTGGTCAGCCTGCTCGCGCTCTCCCTACCAGCCGCCTCGGCCAGCTTCGAAACTGAAACCGGAGTTCATCAAGACATGCCTGGTTCGATCAGCCAGACTTTGTCGACTGTTCCACCGAGTCCTGTCCAGGGACTGTTTTGACAAGCTCGTTACCTGGCATCGAAGGGCTCGAGCATGTCGGCACGATCGACCCGATGAAGATCACGCAAAATAAGGATCCTGCAACGGTGACGGACCCGGTCAGTGTCAACGCGTCACTTTCCAAGGTGGTGGTCACCGGATTCGCCAG-ACCAAAGTCCTCCGCAATGTCGCTCAGCCAGCTAAGAACTTTTGGCT-GGAAACGCACATCCCGCTGCCTGAACATGCGGCTCGAGGGCAACTATCACATGCAGGGCCGCATACTGGTGATACCGCTGAACGGGCACGGCAAGTGCTGGTTTGAGCCGAGCGGCATGGACATCATTATGCGCACCAGCACCGACCTGTACCAGAAGAATGGGCACGTGTTCTACAACGTGACCGGCACGAAGGTGGACTACACCATCTCCGGCCTGCGCCTGCACATGGGCAACCTGTTCGAGGGCGTGAAGGTGCTGGAGGACAGCACCAACCAGTACCTGAACGACAACTGGCGCCCGGTTTCGGAAGCGCTCAAGCCGATCATCGCGAAAACGATCGAGGACATCCTGCTGGCGATCATGCAGAACATCTTCCACCAGCTGCCGGCCGACTACTTTGTGGCGGATCTGCCGCGGAGCGGCGGCTCGTAGGGGATCGGACGCGGCCCGGTTGCTACCGCCTGTACATACAGCAATGGTGACACAGAAAATTGTACTTGTAGGCGTTTAGGGGCAGGATTGAACAAAATAGTTGTATTAAATGTTAGCTAAACGCGACCGTACAAAAAAAAAAA]
[+] EMBL AL931923 [AGAATCGCCCGAGGTTNTGCTGGGCTTTCAGACGTCGCTAGTGCCCGCGGTTTAGGTTGCTGCTCTAAGCTGTATCTAAGAAGACGTGCCTTCAGTGCAGTAGAACGATTCTGTGTGCGGTACACGACAGTGCACGTGCAGTGTCTTTAGGCTACAAAGTGAAACAGTGACTTCCTCCACCAACTACAACCCTCTCAACTCTCAACCTGTGTGTGGAACCTACCCTGTATCAGAGATATTCTTCATCCCGAATTCTGTCCTCAACCAACACACCTGATGTCTGCTGCTGTGCTGGAATGTCTGGAGCACCTGTCCCGCAGTTGGTGCGCCTGTTCTGGGTGGTCAGCCTGCTCGCGCTCTCCCTACCAGCCGCCTCGGCCAGCTTCGAAACTGAAACCGGAGTTCATCAAGACATGCCTGGTTCGATCAGCCAGACTTTGTCGACTGTTCCACCGAGTCCTGTCCAGGGACTGTTTTGACAAGCTCGTTACCTGGCATCGAAGGGCTCGAGCATGTCGGCACGATCGACCCGATGAAGATCACGCAAAATAAGGATCCTGCAACGGTGACGGACCCGGTCAGTGTCAACGCGTCACTTTCCAAGGTGGTGGTCACCGGATTCGCCAG ACCAAAGTCCTCCGCAATGTCGCTCAGCCAGCTAAGAACTTTTGGCT GGAAACGCACATCCCGCTGCCTGAACATG ]
[+] EMBL AY187041 [ ggTGCTGGGCTTTCAGACGTCGCTAGTGCCCGCGGTTTAGGTTGCTGCTCTAAGCTGTATCTAAGAAGACGTGCCTTCAGTGCAGTAGAACGATTCTGTGTGCGGTACACGACAGTGCGCGTGCAGTGTCTTTAGGCTACAAAGTGAAACAGTGACTTCCTCCACCAACTACAACCCTCTCAACTCTCAACC GTGTGTGGAACCTACCCTGTATCAGAGATATTCTTCATCCCGAATTC GTCCTCAACCAACACACC GATGTCTGCTGC GTGCTGGAATGTCTGGAGCACC GTCCCGCAGTTGGTGCGCCTGTTCTGGGTGGTCAGCCTGCTCGCGCTCTCCCTACCAGCCGCCTCGGCCAGCTTCGAAAC GAAACCGGAGTTCATCAAGACATGCC GGTTCGATCAGCCAGACTTTGTCGACTGTTCCACCGAGTCC GTCCAGGGACTG TTTGACAAGCTCGTTACC GGCATCGAAGGGCTCGAGCATGTCGGCACGATCGACCCGATGAAGATCA GCAAAATAAGGATCCTGCAA GGTGACGGA CCGGTCAGTGTCAACGCGTCACTTTCCAAGGTGGTGGTCACCGGTTTCGCCAGCACCAAAGTCCTCCGCAATGTCG TCAG CAG TAAGAAC TTTGGCTGGGAAACGCACATCCGTCTGCC GAAGATGCGGCTCGAGGGCAACTATCACATGCAGGGCCGCATACTGGTGATACCGCTGAACGGGCACGGCAAGTGCTGGTTTGAGCCGAGCGGCATGGACATCATTATGCGCACCAGCACCGACCTGTACCAGAAGAATGGGCACGTGTTCTACAACGTGACCGGCACGAAGGTGGACTACACCATCTCCGGCCTGCGCCTGCACATGGGCAACCTGTTCGAGGGCGTGAAGGTGCTGGAGGACAGCACCAACCAGTACCTGAACGACAACTGGCGCCCGGTTTCGGAAGCGCTCAAGCCGATCATCGCGAAAACGATCGAGGACATCCTGCTGGCGATCATGCAGAACATCTTCCACCAGCTGCCGGCCGACTACTTTGTGGCGGATCTGCCGCGGAGCGGCGGCTCGTAGGGGATCGGACGCGGCCCGGTTGCTACCGCCTGTACATACAGCAATGGTGACACAGAAAATTGTACTTGTAGGCGTTTAGGGGCAGGATTGAACAAAATAGTTGTATTAAATGTTAGCTAAACGCGACCGTACAAAAAAAAAAA]
[+] EMBL BX618105 [ TGGTTTGAGCCGAGCGGCATGGACATCATTATGCGCACCAGCACCGACCTGTACCAAAAGAATGGGCACGTGTTCTACAACGTGACCGGCACGAAGGTGGACTACACCATCTCCGGCCTGCGCCTGCACATGGGCAACCTGTTCGAGGGCGTGAAGGTGCTGGAGGACAGCACCAACCAGTACCTGAACGACAACTGGCGCCCGGTTTCGGAAGCGCTCAAGCCGATCATCGCGAAAACGATCGAGGACATCCTGCTGGCGATCATGCAGAACATCTTCCACCAGCTGCCGGCCGACTATTTTGTGGCGGATCTGCCGCGAAGCGGCGGCTCGTAGGGGATCGGACGCGGCCCGGTTGCTACCGCCTGTACATACAGCAATGGTGACGCAGAAAATTGTACTTGTAGGCTTTTAGGGGCAGGATTGAACAAAATAGTTGTATTAAATGTTAGCTAA ]
consensusID : consensus_8981#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 678 fasta sequence
[CCGCGGACGCGTGGGCATAAATCCGGGCGAAAGGGTGTGACATTCGAGAAAAGAGATGTTTTCCTCGATGAAAACGCTCATGTCCGCGGCGACCAGGCCGATCTTGGCCCGGTCGTACGCGGCAAAGGCGGCGGTGAATGCCGCGGCCGGAGCGCAGGGTAAGGTAGTGGCCGTCATCGGTGCCGTCGTGGACGTGCAGTTCGACGAGCAGCTGCCCCCGATTCTGAACGCGCTGGAGGTGCAGGGCCGCAGCGCCCGGCTGGTGCTGGAGGTTGCGCAACATCTGGGTGAGAACACGGTGCGCACCATCGCCATGGACGGTACGGAGGGTCTGGTGCGTGGGCAGCGCGTGCTGGACACCGGTTCGCCCATCCGTATCCCGGTCGGGGCGGAGACGCTCGGTCGCATCATTAACGTGATCGGCGAGCCGATCGATGAGCGTGGCCCGATCGACACGAACCTGTCGGCGCCGATCCACGCCGAGGCGCCCGAGTTCATCGAGATGAGCGTCGAGCAGGAGATCCTGGTGACGGGCATCAAGGTGGTGGACCTGCTGGCCCCGTACGCGAAGGGCGGCAAGATCGGCCTGTTCGGTGGTGCCGGCGTTGGCAAGACCGTACTCATCATGGAGCTGATCAACAACGTCGCCAAGGCGCACGGTGGCTACTCCGTGTTTGC]
[+] EMBL BM641167 [CCGCGGACGCGTGGGCATAAATCCGGGCGAAAGGGTGTGACATTCGAGAAAAGAGATGTTTTCCTCGATGAAAACGCTCATGTCCGCGGCGACCAGGCCGATCTTGGCCCGGTCGTACGCGGCAAAGGCGGCGGTGAATGCCGCGGCCGGAGCGCAGGGTAAGGTAGTGGCCGTCATCGGTGCCGTCGTGGACGTGCAGTTCGACGAGCAGCTGCCCCCGATTCTGAACGCGCTGGAGGTGCAGGGCCGCAGCGCCCGGCTGGTGCTGGAGGTTGCGCAACATCTGGGTGAGAACACGGTGCGCACCATCGCCATGGACGGTACGGAGGGTCTGGTGCGTGGGCAGCGCGTGCTGGACACCGGTTCGCCCATCCGTATCCCGGTCGGGGCGGAGACGCTCGGTCGCATCATTAACGTGATCGGCGAGCCGATCGATGAGCGTGGCCCGATCGACACGAACCTGTCGGCGCCGATCCACGCCGAGGCGCCCGAGTTCATCGAGATGAGCGTCGAGCAGGAGATCCTGGTGACGGGCATCAAGGTGGTGGACCTGCTGGCCCCGTACGCGAAGGGCGGCAAGATCGGCCTGTTCGGTGGTGCCGGCGTTGGCAAGACCGTACTCATCATGGAGCTGATCAACAACGTCGCCAAGGCGCACGGTGGCTACTCCGTGTTTGC]
[+] EMBL BM599779 [CCGCGGACGCGTGGG TCCGGGCGAAAGGGTGTGAAATTCGAGAAAAGAGATGTTTTCCTCGATGAAAACGCTCATGTCCGCGGCGACCAGGCCGATCTTGGCCCGGTCGTACGCGGCAAAGGCGGCGGTGAATGCCGCGGCCGGAGCGCAGGGTAAGGTAGTGGCCGTCATCGGTGCCGTCGTGGACGTGCAGTTCGACGAGCAGCTGCCCCCGATTCTGAACGCGCTGGAGGTGCAGGGCCGCAGCGCCCGGCTGGTGCTGGAGGTTGCGCAACATCTGGGTGAGAACACGGTGCGCACCATCGCCATGGACGGTACGGAGGGTCTGGTGCGTGGGCAGCGCGTGCTGGACACCGGTTCGCCCATCCGTATCCCGGTCGGGGCGGAGACGCTCGGTCGCATCATTAACGTGATCGGCGAGCCGATCGATGAGCGCGGCCCGATCGACACGAACCTGTCGGCGCCGATCCACGCCGAGGCGCCCGAGTTCATCGAGATGAGCGTCGAGCAGGAGATCCTGGTGACGGGCATCAAGGTGGTGGACCTGCTGGCCCCGTACGCGAAGGGCGGCAAGATCGGCCTGTTCGGTGGTGCCGGCGTCGGCAAGACCGTACTCATCATGGAGCTGATCAACAACGTCGCCAAGGCGCACGGTGGCTACTCCGTGTT ]
consensusID : consensus_8981#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 571 fasta sequence
[CCGCGGACGCGTGGGCGCTCGTACTGTGAAGATGGCTGGAGTAAACCGTAAGCATCATCTACTAGCAACGATTGCCCTGCTATGGCTGGTGGCCGCCAACTGCCTGCTCGAGTCGGTCGACGCTCGCAAAAGCCGGGGCAGCTCGAAGCGTTCCTCGCGCCGACCGAAGGGCGTCAATATTGAGATCTACCATCCGAAGGGTGTGATGGTGTGGTACCCGTACCGTGCCGGCATGGAACTGTTCGGCATCGAGATTTTCATCAACAAGGCAAACCAACCGTCGTCGTCGGGCGACTCGAGTGAGGAAGAGTCCACACCGCCGGTGTGTGATATCTGTCTCAACACGACCGAAGTGTCGTACGGCAAGTTTATACTGCGCAGCGAGGACGCCGTGATCCGCAGCCGGGACCACGTATACTACAATGCGATCGTGAAGAAAACCAGCGGCAAGGCGTACGTGTCCCGATCGAACGATTTCTACGTGTCAGGTAAGTGAAAAGAAATGTGCCATCTTGAAGGGGAGAGTCCTTCTAACGCGCCATTTTGCTCTCATCCCACAATAGAAAGTCGC]
[+] EMBL BM584914 [CCGCGGACGCGTGGGCGCTCGTACTGTGAAGATGGCTGGAGTAAACCGTAAGCATCATCTACTAGCAACGATTGCCCTGCTATGGCTGGTGGCCGCCAACTGCCTGCTCGAGTCGGTCGACGCTCGCAAAAGCCGGGGCAGCTCGAAGCGTTCCTCGCGCCGACCGAAGGGCGTCAATATTGAGATCTACCATCCGAAGGGTGTGATGGTGTGGTACCCGTACCGTGCCGGCATGGAACTGTTCGGCATCGAGATTTTCATCAACAAGGCAAACCAACCGTCGTCGTCGGGCGACTCGAGTGAGGAAGAGTCCACACCGCCGGTGTGTGATATCTGTCTCAACACGACCGAAGTGTCGTACGGCAAGTTTATACTGCGCAGCGAGGACGCCGTGATCCGCAGCCGGGACCACGTATACTACAATGCGATCGTGAAGAAAACCAGCGGCAAGGCGTACGTGTCCCGATCGAACGATTTCTACGTGTCAGGTAAGTGAAAAGAAATGTGCCATCTTGAAGGGGAGAGTCCTTCTAACGCGCCATTTTGCTCTCATCCCACAATAGAAAGTCGC]
[+] EMBL BX604458 [ TAAGCATCATCTACTAGCAACGATTACCCTGCTATGGCTGGTGGCCGCCAGCTGCCTGCTCGAGTCGGTCGACGCTCGCAAAAGCCGGGGCAGCTCGAAGCGTTCCTCGCGCCGACCCAAGGGCGTCAATATTGAGATCTACCATCCGAAGGGTGTGATGGTGTGGTACCCGTACCGTGCCGGCATGGAACTGTTCGGCATCGAGATTTTCATCAACAAGGCAAACCAACCGTCGTCGTCGGGTGACTCGAGTGAGGAAGAGTCCACACCGCCGGTGTGTGATATCTGTCTCAACACGACCGAAGTGTCGTACGGCAAGTTTATACTGCGCAGCGAGGACGCCGTGATCCGCAGCCGGGACCACGTGTACTACAATGCGATCGTGAAGAAAACCAGCGGCAAGGCGTACGTGTCCCGATCGAACGATTTCTACGTGTCAGGTAAGTGAGAAGAAATGTGCCATCTTGAAGGGGAGAGTCGTTCTAACGCGCCATTTTGCTCTCATtc ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_8981#1 --------------------------------AGAATCGCCCGAGGTTNTGCTGGGCTTT 28
consensus_8981#2 ------------------------------------------------------------
consensus_8981#0 CCGCCCACGCGTCCGGCACTTTGTTATGCTTCGGGGGGTTGTTTCGTTCGCCTGATTCCG 60
consensus_8981#3 ------------------------------------------------------------
consensus_8981#1 CAGACGTCGCTAGTGCCCGCGGTTTAGGTTGCTGCTCTAAGCTGTATCTAAGAAGACG-T 87
consensus_8981#2 ------------------------------------------------------------
consensus_8981#0 AGGACACCTTTTCTTGTCGCATTTGCTTGTGCAGTGTTGGTGTACTGCGTGTATTACGAC 120
consensus_8981#3 ------------------------------------------------------------
consensus_8981#1 GCCTTCAGTGCAGTAGAACGATTCTGTGTGCGGTACAC---GACAGTGCACGTGCAGTGT 144
consensus_8981#2 ------------------------------------------------------------
consensus_8981#0 GCCCTTGGTACGACGAGCGTGCAGTGTGACCATTCCATCCGGACGGCACAGCAGCAGCAG 180
consensus_8981#3 ------------------------------------------------------------
consensus_8981#1 CTTTAGGCTACAAAGT-GAAACAGTGACTTCCTCCACCAACTACAACCCTCTCAACTCTC 203
consensus_8981#2 ------------------------------------------------------------
consensus_8981#0 CAGCAGCAGACGCAACAGGAAGTGCAATTTTCCCTCCGAAGGATACAGTGAAACGCAGCG 240
consensus_8981#3 ------------------------------------------------------------
consensus_8981#1 AACCTGTGTGTGGAACCTACCCTGTATCAGAGATATTCTTCATCCCGAATTCTGTCCTCA 263
consensus_8981#2 ------------------------------------------------------------
consensus_8981#0 TAAATCATCGCATCCTAGATCGTGATCGCGAGAGCTCTCTCTCTCTCTCTTTTTACCCCA 300
consensus_8981#3 ------------------------------------------------------------
consensus_8981#1 ACCAACACACCTGATGTCTGCTGCTGTGCTGGAATGTCTGGAGCACCTGTCCCGCAGTTG 323
consensus_8981#2 ------------------------------------------------------------
consensus_8981#0 TCCCCTGCCCCCGGAGAGCGTTGTT-TAGAACAACGGCAAAAACATCTGTTTCGCGGAGG 359
consensus_8981#3 ------------------------------------------------------------
consensus_8981#1 GTGCGCCTGTTCTGGGTGGTCAGCCTGCTCGCGCTCTCCCTACCAGCCGCCTCGGCCAGC 383
consensus_8981#2 ------------------------------------------------------------
consensus_8981#0 ACGAACCCATACCGGTGGCCGGAGCAGT--GCAACCGTTCGAACCGTGGAAAGGCACGGA 417
consensus_8981#3 ------------------------------------------------------------
consensus_8981#1 TTCGAAACTGAAACCGGAGTTCATCAAGACATGCCTGGTTCGATCAGCCAGACTTTGTCG 443
consensus_8981#2 ------------------------------------------------------------
consensus_8981#0 ACGGAACACGCTGAGAGCGGACAGCAGCGGACAGAAAACTCACGCGCGGTATAAAGCACG 477
consensus_8981#3 ------------------------------------------------------------
consensus_8981#1 ACTGTT-CCACCGAGTCCTGTCCAGGGACTGTTTTGACAAGCTCGTTACCTGGCATCGAA 502
consensus_8981#2 --------------------------------------------------------CCGC 4
consensus_8981#0 ACCGCTGCCACGATGAGCCGGTTATTCGGTAGTAGTAGTGGTTCGGTGCTCGGCACGGCC 537
consensus_8981#3 ------------------------------------------------------------
consensus_8981#1 GGGCTCGAG--CATGTCGGCACG---ATCGACCCGATGAAGATCACGCAAAATAAGGATC 557
consensus_8981#2 GGACGCGTG--GGCATAAATCCG---GGCGAAAGGGTGTGACATTCGAGAAAAGAGATGT 59
consensus_8981#0 GGAAGCAAAATGTCGTCGTTCCGCAAGGTGACTCACTGTATCTTCGACATGGACGGGCTG 597
consensus_8981#3 ------------------------------------------------------------
consensus_8981#1 CTGCAA----CGGTGACGGACCCGGTCAGTGTCA-ACGCGTC-------ACTTTCCAAGG 605
consensus_8981#2 TTTCCT----CGATGAAAA---CGCTCA-TGTC---CGCGGC-------GA---CCAGGC 98
consensus_8981#0 TTGCTTGATACGGAGAAGATCTACGAAAACATCTTGCGCGATCTGTTGAAATCGTACAAC 657
consensus_8981#3 ------------------------------------------------------------
consensus_8981#1 TGGTGGTCACCGGATTCGCCAGAC-CAAAGTCCTCCGC-AATGTCGCTCAGC----CAGC 659
consensus_8981#2 CGATCTTGGCCCGGTCGTACGCGG-CAAAGGCGGCGGTGAATGCCG--CGGC----CGGA 151
consensus_8981#0 TCGCCGTACCCGTGGCCGACGCGCATGAAGGTGATGGGCACAACGGAACAGCGCACCTGC 717
consensus_8981#3 ----------------CCGCGGACGCGTGGGCGCTCGT-ACTGTGA-----------AGA 32
* * * * *
consensus_8981#1 TAAGAACTTTTGG-----CTGGAAACGCACATCCCGCTGCC-TGAACATGCGGCTCGA-- 711
consensus_8981#2 GCGCAGGGTAAGG-----TAGTGGCCGTCATCGGTGCCGTCGTGGACGTGCAGTTCGAC- 205
consensus_8981#0 TCGATACTGGTGAACGATCTGAAGCTGCCCTGCTCGGTGGA-TGAGTTTCTGGCGCGATT 776
consensus_8981#3 TGGCTGGAGTAAA-----CCGTAAGCATCATCTAC-TAGCAACGATTGCCCTGCTATGGC 86
* * * *
consensus_8981#1 GGGCAACTATCACATGCAGGGCCGCATACTGGTGATACCGCTGAACGG-GCA---CGGCA 767
consensus_8981#2 GAGCAGCTGCCCCCGATTCTGA-ACGCGCTGGAGGTGCAGGGCCGCAGCGCC---CGGCT 261
consensus_8981#0 CCGTCGTGATCAGTTGCTACACCTCGGCCAGGCGCCGCTAATGCAAGGTGCAGAGCGGCT 836
consensus_8981#3 TGGTGGCCGCCAACTGCC-TGCTCGAGTCGGTCGACGCTCGCAAAAGCCGGG--GCAGCT 143
* * * * * * * * **
consensus_8981#1 -AGTGCTGGTTTGAGCCGAGCGGCATGG--ACATCATTATGCGC-ACCAGCACCGACCTG 823
consensus_8981#2 -GGTGCTGGAGGTTGCGCAACATCTGGGTGAGAACACGGTGCGC-ACCATCGCCA---TG 316
consensus_8981#0 -GGTGCGCCATCTGCACCAACACAACGTGCCGATCGCGCTGGCC-ACCAGCTCGGGAGCG 894
consensus_8981#3 CGAAGCGTTCCTCGCGCCGACCGAAGGGCGTCAATATTGAGATCTACCA--TCCGAAGGG 201
** * * * * * **** * *
consensus_8981#1 TACCAGAAGAATGGGCACGTGTTCTACAA-CGTG-ACCGGCACGAA--GGTGGACTACAC 879
consensus_8981#2 GACGGTACGGAGGGTCTGGTG---------CGTG-GGCAGCGCGT---GCTGGACA---- 359
consensus_8981#0 GATTCGGTCGAGGTGAAGACAAAGAACCACCGCG-AGCTGTTCGAGCTGTTCGGGCACAA 953
consensus_8981#3 TGTGATGGTGTGGTACCCGTACCGTGCCGGCATGGAACTGTTCGGC--ATCGAGATTTTC 259
* * * * * **
consensus_8981#1 CATCTCCGGCCTGCGCCTGCA-CATGGGCAACCTGTTCGAG--GGCGTGAAGGTGC-TGG 935
consensus_8981#2 -----CCGGTTCGCCCATCCG-TATCC-CGGTCGGGGCGGA--GACGCTCGGTCGCATCA 410
consensus_8981#0 GGTGATGGGTTCGTCCGATCC-CGACGTGAAGGAGGGTAAGCCGGCGCCCGATATCTTCC 1012
consensus_8981#3 ATCAACAAGGCAAACCAACCGTCGTCGTCGGGCGACTCGAG------TGAGGAAGAGTCC 313
* * * *
consensus_8981#1 AGGACAGCACCAACCAGTACCTGAACGA---------CAACTGGCGCCCGGTTT---CGG 983
consensus_8981#2 TTAACGTGATCGGCGAG---CCGATCGA---------TGAGCGTGGCCCGATCGACACGA 458
consensus_8981#0 TGGTCGCAGCGGACCGCTTCCCGGACCGGCCCGCTCCCGACCAGTGCCTGGTGTTTGAGG 1072
consensus_8981#3 ACACCGCCGGTGTGTGATATCTGTCTCAACA------CGACCGAAGTGTCGTAC-----G 362
* * * * * *
consensus_8981#1 AAGCGCTCAAGCCGATCATCGCGAAAACGATCGAGGACATCCTGCTGGCGATCATGCAGA 1043
consensus_8981#2 ACCTGTCGGCGCCGATCCACGCCGAGGCGCCCGAGTTCATCGAGATGAGCGTCGAGCAGG 518
consensus_8981#0 ATGCGCCGAA--CGGT-GTGACGGCAGCGATTGCGGCCGGCATGCAGGCCGTCATGGTGC 1129
consensus_8981#3 GCAAGTTTATACTG--CGCAGCGAGGACG-CCGTGATCCGCAGCCGGGACCACGTATACT 419
* * * ** * * * * * *
consensus_8981#1 A-CATCTTCCACCAGCTGCCGGCCGAC--TACTTTGTGGCGGATCTGCCGCGGAGCGGCG 1100
consensus_8981#2 A-GATC---------CTGGTGACGGGC--ATCAAGGTGGTGGACCTGCT--GGCCCCGTA 564
consensus_8981#0 CCGATCCGCACATCGAGGAGGACCAGCGGAAGCACGCGACGGTCGTGCT--GAAATCACT 1187
consensus_8981#3 ACAATGCGATCGT-GAAGAAAACCAGCGGCAAGGCGTACGTGTCCCGAT--CGAACGATT 476
** * * * * * *
consensus_8981#1 GCTCGTAGGGGATCGGACGCGGCCCG-GTTGCTACCGCCTGTA-CATACAGCAATGGTGA 1158
consensus_8981#2 -CGCGAAGGGCGGCAAGATCGGCCTG-TTCGGTGGTGCC----------GGCGTTGGCAA 612
consensus_8981#0 CGAGGACTTCCATCCGGAACAGTTCGGTTTGCCGCCGTTTACGTCGTGAACCACTCGTGG 1247
consensus_8981#3 TCTACGTGTCAGGTAAGTGAAAAGAAATGTGCCATCTTGAAGG--GGAGAGTCCTTCTAA 534
* *
consensus_8981#1 CACAGA-----AAATTGTACTTGTAGGCGTTTAGGGGCAGGATTGAACAAAATAGTTG-T 1212
consensus_8981#2 GACCGT-----A--CTCATCATGGAGCTGATCAACAACGTCGCCAAGGCGCACGGTGGCT 665
consensus_8981#0 GACGCTTTTG-ACGACTATCCTGGAGCCGGCCATTAC--TCCCCGAAAAAAAAAAATGCT 1304
consensus_8981#3 CGCGCCATTTTGCTCTCATCCCACAATAGAAAGTCGC----------------------- 571
* * * *
consensus_8981#1 ATTAAATGTTAGCTAAACGCGACCGTACAAAAAAAAAAA--------------------- 1251
consensus_8981#2 ACTCCGTGTTTGC----------------------------------------------- 678
consensus_8981#0 TACAACTACTACCACTACTACTACTACTACAACCGCATGCCGCAACGTAGTTGGTGTGTG 1364
consensus_8981#3 ------------------------------------------------------------
consensus_8981#1 ------------------------------------------------------------
consensus_8981#2 ------------------------------------------------------------
consensus_8981#0 CGGCACACGTCCGATTTTAGCAGAGCAGTGTTCTAAACACATCACCACCGTTGGAGCGAA 1424
consensus_8981#3 ------------------------------------------------------------
consensus_8981#1 ------------------------------------------------------------
consensus_8981#2 ------------------------------------------------------------
consensus_8981#0 ATTTTGATGAAGCGTGCGCACGCCACGTTTCGTTTGCGTAGAACGCACAAGCGTCCACCC 1484
consensus_8981#3 ------------------------------------------------------------
consensus_8981#1 ------------------------------------------------------------
consensus_8981#2 ------------------------------------------------------------
consensus_8981#0 CGAAAAAAGGGGCCACTGCCGGGTGGGACGGACGTTAGTTTGTATTTAGTTTTATTTTTC 1544
consensus_8981#3 ------------------------------------------------------------
consensus_8981#1 ------------------------------------------------------------
consensus_8981#2 ------------------------------------------------------------
consensus_8981#0 GGAAAGCTTTTTCTTTAGGTGCGCGATCGATGTGTATCGCTAGAATGTGAAATCGCTTGA 1604
consensus_8981#3 ------------------------------------------------------------
consensus_8981#1 ------------------------------------------------------------
consensus_8981#2 ------------------------------------------------------------
consensus_8981#0 TTGAGCGCCCGTCAATGCGAACAAAAAAAGAAAAAAAAAGAAAATACAATGTGCTAATTG 1664
consensus_8981#3 ------------------------------------------------------------
consensus_8981#1 -
consensus_8981#2 -
consensus_8981#0 T 1665
consensus_8981#3 -
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||