cluster # 8991

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Anopheles gambiae
cluster # 8991 cluster # 8991 Sequences # 13 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8991#0 length = 1568 sequences # 9
consensus_8991#1 length = 807 sequences # 2

consensus_8991#2 length = 637 sequences # 1
consensus_8991#3 length = 549 sequences # 1

consensusID : consensus_8991#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 1568
fasta sequence

                              [TTTATTTCCATATTTGCATTGTTAAACCAC-TT-TATTTGTTCAACTTTTTATTTAGTTTTTTTTTTGAAGCTTTTATTTTATCACAAAAAAACCTCTAAAGTAGTACCGTCGTGTGCTACAGTTTAAAGTTTTCCAACGATAATGATTCGGCATCG-AGATTGATGCTCGCCGTAACGCTCTCCGATATAACGATCGATCCTTCCTCCTGCGACAGCTCGTCCCGCTCGTTGTCCACCTCCTCGAGATGGCACAGGAACTGGTCGTCCTCGTACGTGGGAAAGAAGTACTCCGGCTGGTCCCACGCACCCGCTTCCTTGTCCAGCCGGAAGTGGTTCAACTCTGCCAGATGCTTGCAAAGACTCTCGTAATCAGGGCACTGCTCGCCACATGCAATACACTTGCGTATGTGCATCTGACGGCGAATAAAGTTCACCACCTTTACGCGCTGATAGAAGCTCATGTCCGCCACCGTTTGATCGAAATCAAACGTATGCTTCGCCACCATATGGCGCTTCAGCGTGTCCACATTTGCTTCGGCGTGCGTACAGAACAGACACGTTGTCGTTTGCTCCTCCCCGTTCCAGTCGGACCAATCGGAGTCGGAGTCGGAGTCGGACGCAAATACGCGGCTTTCCTCTTTCCGCTTCGCGAT-GGGCACGTACTCGGGCTTCTGCTTGAGCCGATAGTTGACGAGAAAGAACCGATCGTAGTAGTGGTTGTCCGGGTTGATGCGCTTGTGGCCCTTCTTGCGCATGTGTTCCTTGAGCGTGGGCCGATCTTTGAACAGCTTTTCGCAGAACAAACAGATCAACCGGTTCAGCTTGTCCTGCACGATTTCGATCAGCTCGTCCACAAACACCAGATGTTCCGGCTTGCCCAGCAGGAGAAAGTGCTTCGTGTAGAGATGGCTCACAAACTCGGGGCGCGTTTCCGCCCGATAGTCACGGCAGTACAGGCAGCCGCGGTAAAAATTCCGATCCGTCCGTTCGAACTGATGGCGGGTGAGGACGAGCT-CCAGCTTCTCCCTTCGCAGCCGTTGCCGCAGCTCGTAGTCCAACGGTTCAACGTCGCTCAGCAGGAAATACTTCTCGTTCGGTGAGCTCGTACCGTCGGGCAGCTGGTTCAGCAGCATGGAGGAGCAATATTTCTCCACCGGTTCGTGGGCGAACTTTTCCTTCCAGTAGTAGCAGTAGCTGGGCAGGCAGGCAATTTCCTTCACATCGGCCACCACCAGTCGGTGGACCAGGTACAGATGGGCCAGACATTGGTCGGAACCGTTGTCGGCAGTGTGGAAATCGTAAGTGTTGCTGCAGAACATGCACGGTACCGTCCGCTCATCGACCAGCGACGTTGGGGGATCGGTTGACGAGTCCTTGGTAAAGTTGAGCGGCCCTATGATGGTGCTTTTGGACGCTTCACCACCTTCATCGT-CGTTTGCGTTGGAAAGTTGTGTGCTCATTGCATTAACAGTGGAGAAACGGCAGACTAGGGGTAAATGTAATTACTTTTGCACCGAAATGGGTTTGTGCACCTGAAGCACAGGAAAACATGTCTTGCGAGCTGCCGAC]

[+] EMBL CNS09HFV             [TTTATTTCCATATTTGCATTGTTAAACCAC TTATATTTGTTCAACTTTTTATTTAGTTTTTTTTTTGAAGCTTTTATTTTATCACAAAAAAACCTCTAAAGTAGTACCGTCGTGTGCTACAGTTTAAAGTTTTCCAACGATAATGATTCGGCATCG AGATTGATGCTCGCCGTAACGCTCTCCGATATAACGATCGATC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CNS09JKO             [               GCATTGTTAAACCAC TT TATTTGTTCAACTTTTTATTTAGTTTTTTTTTTGAAGCTTTTATTTTATCACAAAAAAACCTCTAAAGTAGTACCGTCGTGTGCTACAGTTTAAAGTTTTCCAACGATAATGATTCGGCATCG AGATTGATGCTCGCCGTAACGCTCTCCGATATAACGATCGATCCTTCCTCCTGCGACAGCTCGTCCCGCTCGTTGTCCACCTCCTCGAGATGGCACAGGAACTGGTCGTCCTCGTACGTGGGAAAGAAGTACTCCGGCTGGTCCCACGCACCCGCTTCCTTGTCCAGCCGGAAGTGGTTCAACTCTGCCAGATGCTTGCAAAGACTCTCGTAATCAGGGCACTGCTCGCCACATGCAATACACTTGCGTATGTGCATCTGACGGCGAATAAAGTTCACCACCTTTACGCGCTGATAGAAGCTCATGTCCGCCACCGTTTGATCGAAATCAAACGTATGCTTCGCCACCATATGGCGCTTCAGCGTGTCCACATTTGCTTCGGCGTGCGTACAGAACAGACACGTTGCCGTTTGCTCCTCCCCGTTCCAGTCGGACCAATCGGAGTCGGAGTCGGAGTCGGACGCAAATACGCGGCTTTCCTCTTTCCGCTTCGCGAT GGGCACGTACTCGGGCTTCTGCTTGAGCCGATAGTTGACGAGAAAGAACCGATCGTAGTAGTGGTTGTCCGGGTTGATGCGCTTGTGGCCCTTCTTGCGCATGTGTTCCTTGAGCGTGGGCCGATCTTTGAACAGCTTTTCGCAGAACAAACAGATCAACCGGTTCAGCTTGTCCTGCACGATTTCGATCAGCTCGTCCACAAACACCAGATGTTCCGGCTTGCCCAGCAGGAGAAAGTGCTTCGTGTAGAGATGGCTCACAAACTCGGGGCGCGTTTCCGCCCGATAGTCACGGCAGTACGGGCAGCCGCGGTAAAAATTCCGATCCGTCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CNS09R4Z             [               GCATTGTTAAACCACTTT TATTTGTTCAACTTTTTATTTAGTTTTTTTTTTGAAGCTTTTATTTTATCACAAAAAAACCTCTAAAGTAGTACCGTCGTGTGCTACAGTTTAAAGTTTTCCAACGATAATGATTCGGCATCGCAGATTGATGCTCGCCGTAACGCTCTCCGATATAACGATCGATCCTTCCTCCTGCGACAGCTCGTCCCGCTCGTTGTCCACCTCCTCGAGATGGCACAGGAACTGGTCGTCCTCGTACGTGGGAAAAAAGTACTCCGGCTGGTCCCACGCACCCGCTTCCTTGTCCAGCCGGAAGTGGTTCAACTCTGCCAGATGCTTGCAAAGACTCTCGTAATCAGGGCACTGCTCGCCACATGCAATACACTTGCGTATGTGCATCTGACGGCGAATAAAGTTCACCACCTTTACGCGCTGATAGAAGCTCATGTCCGCCACCGTTTGATCGAAATCAAACGTATGCTTCGCCACCATATGGCGCTTCAGCGTGTCCACATTTGCTTCGGCGTGCGTACAGAACAGACACGTTGTCGTTTGCTCCTCCCCGTTCCAGTGGGACCAATCGGAGTCGGAGTCGGAGTGGGACGCAAATACGCGGCTTTCCTCTTTCCGCTTCGCGATGGGGCACGTACTCGGGCTTCTGCTTGAGCCGATAGTTGACGAGAAAAAACCGATCGTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL BM617571             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                CATTTGCTTCGGCGTGCGTACAGAACAGACACGTGGTCGTTTGCTCCTCCCCGTTCCAGTCGGACCAATCGGAGTCGGAGTCGGAGTCGGACGCAAAGACGCGGCTTTCCTCTTTCCGCTTCGCGAT GGGCACGTACTCGGGCTTCTGCTTGAGCCGATAGTTGACGAGAAAGAACCGATCGTAGTAGTGGTTGTCCGGGTTGATGCGCTTGTGGCCCTTCTTGCGCATGTGTTCCTTGAGCGTGGGCCGATCTTTGAACAGCTTTTCGCAGAACAAACAGATCAACCGGTTCAGCTTGTCCTGCACGATTTCGATCAGCTCGTCCACAAACACCAGATGTTCCGGCTTGCCCAGCAGGAGAAAGTGCTTCGTGTAGAGATGGCTCACAAACTCGGGGCGCGTTTCCGCCCGATAGTCACGGCAGTACAGGCAGCCGCGGTTAAAATTCCGATCCGTCCGTTCGAACTGATGGCGGGTGAGGACGAGCT CCAGCTTCTCCCTTCGCAGCCGTTGCCGCAGCTCGTAGTCCAACGGTTCAACGTCGCTCAGCAGGAAATACTTCTCGTTCGGTGAGCTCGTACCGTCGGGCAGCTGGTTCAGCAGCATGGAGGAGCAATATTTCTCCACCGGTTCGTGGGCGAACTTTTCCTTCCAGTAGTAGCAGTAGCTGGGCAGGCAGGCAATTTCgg                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CNS09JKN             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         TGCTCCTCCCCGTTCCAGTCGGACCAATCGGAGTCGGAGTCGGAGTCGGACGCAAATACGCGGCTTTCCTCTCTCTCCTTCGCGAT GGGCACGTACTCGGGCTTCTGCTTGAGCCGATAGTTGACGAGAAAGAACCGATCGTAGTAGTGGTTGTCCGGGTTGATGCGCTTGTGGCCCTTCTTGCGCATGTGTTCCTTGAGCGTGGGCCGATCTTTGAACAGCTTTTCGCAGAACAAACAGATCAACCGGTTCAGCTTGTCCTGCACGATTTCGATCAGCTCGTCCACAAACACCAGATGTTCCGGCTTGCCCAGCAGGAGAAAGTGCTTCGTGTAGAGATGGCTCACAAACTCGGGGCGCGTTTCCGCCCGATAGTCACGGCAGTACGGGCAGCCGCGGTAAAAATTCCGATCCGTCCGTTCGAACTGATGGCGGGTGAGGACGAGCT CCAGCTTCTCCCTTCGCAGCCGTTGCCGCAGCTCGTAGTCCAACGGTTCAACGTCGCTCAGCAGGAAATACTTCTCGTTCGGTGAGCTCGTACCGTCGGGCAGCTGGTTCAGCAGCATGGAGGAGTAATATTTCTCCACCGGTTCGTGGGCGAACTTTTCCTTCCAGTAGTAGCAGTAGCTGGGCAGGCAGGCAATTTCCTTCACATCGGCCACCACCAGTCGGTGGACCAGGTACAGATGGGCCAGACATTGGTCGGAACCGTTGTCGGCAGTGTGGAAATCGTAAGTGTTGCTGCAGAACATGCACGGTACCGTCCGCTCATCGACCAGCGACGTTGGGGGATCGGTTGACGAGTCCTTGGTAAAGTTGAGCGGCCCTATGATGGTGCTTTTGGACGCTTCACCACCTTCATCGTGCGTTTGCGTTGGAAAGTTGTGTGCTCATTGCATTAACAGTGGAGAAACGGCAGACTAGGGGTAAATGTAATTAC TTTGCACCGAAATGGG                                              ]
[-] EMBL CNS09R4Y             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TGGGCCGATCTTTGAACAGCTTTTCGCAGAACAAACAGATCAACCGGTTCAGCTTGTCCTGCACGATTTCGATCAGCTCGTCCACAAACACCAGATGTTCCGGCTTGCCCAGCAGGAGAAAGTGCTTCGTGTAGAGATGGCTCACAAACTCGGGGCGCGTTTCCGCCCGATAGTCACGGCAGTACAGGCAGCCGCGGTAAAAATTCCGATCCGTCCGTTCGAACTGATGGCGGGTGAGGACGAGCT CCAGCTTCTCCCTTCGCAGCCGTTGCCGCAGCTCGTAGTCCAACGGTTCAACGTCGCTCAGCAGGAAATACTTCTCGTTCGGTGAGCTCGTACCGTCGGGCAGCTGGTTCAGCAGCATGGAGGAGCAATATTTCTCCACCGGTTCGTGGGCGAACTTTTCCTTCCAGTAGTAGCAGTAGCTGGGCAGGCAGGCAATTTCCTTCACATCGGCCA CACCAGTCGGTGGACCAGGTACAGATGGGCCAGACATTGGTCGGAACCGTTGTCGGCAGTGTGGAAATCGTAAGTGTTGCTGCAGAACATGCACGGTACCGTCCGCTCATCGACCAGCGACGTTGGGGGATCGGTTGACGAGTCCTTGGTAAAGTTGAGCGGCCCTATGATGGTGCTTTTGGACGCTTCACCACCTTCATCGT CGTTTGCGTTGGAAAGTTGTGTGCTCATTGCATTAACAGTGGAGAAACGGCAGACTAGGGGTAAATGTAATTACTTTTGCACCGAAATTGATTTGTGCACCTGAAGCACAGGAAAACATGTCTTGCGAGCTGCCGAC]
[-] EMBL BM582072             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     TGTAGAGATGGCTCACAAACTCGGGGCGCGTTTCCGCCCGATAGTCACGGCAGTACAGGCAGCCGCGGTTAAAATTCCGATCCGTCCGTTCGAACTGATGGCGGGTGAGGACGAGCT CCAGCTTCTCCCTTCGCAGCCGTTGCCGCAGCTCGTAGTCCAACGGTTCAACGTCGCTCAGCAGGAAATACTTCTCGTTCGGTGAGCTCGTACCGTCGGGCAGCTGGTTCAGCAGCATGGAGGAGCAATATTTCTCCACCGGTTCGTGGGCGAACTTTTCCTTCCAGTAGTAACAGTAGCTGGGCAGGCAGGCAATTTCCTTCACATCGGCCACCACCAGTCGGTGGACCAGGTACAGATGAGCCAGACATTGGTCGGAACCGTTGTCGGGAGTGTGGAAATCGTATGTGTTGCTGCAGAACATGCACGGTACCGTCCGCTCATCGACCAGCGACGTTGGGGGATCGGTTGACGAGTCCTTGGTAAAGTTGAGCGGCCCTATGATGGTGCTTTTGGACGCTTCACCACCTTCTTCGT CGTTTGCGTTGGAAAGTTGTGTGCTCATTGCATTAACAGTGGAGAAACGGCAGACTAGGGGAAAATGTAcgg                                                                 ]
[-] EMBL BX622418             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 AGCCGCGGTNAAAATTCCGATCCGTCCGTTCGAACTGATGGCGGGTGAGGACGAGCTCCCAGCTTCTCCCTTCGCAGCCGTTGCCGCAGCTCGTAGTCCAACGGTTCAACGTCGCTCAGCAGGAAATACTTCTCGTTCGGTGAGCTCGTACCGTCGGGCAGCTGGTTCAGCAGCATGGAGGAGCAATATTTCTCCACCGGTTCGTGGGCGAACTTTTCCTTCCAGTAGTAGCAGTAGCTGGGCAGGCAGGCAATTTCCTTCACATCGGCCACCACCAGTCGGTGGACCAGGTACAGATGGGCCAGACATTGGTCGGAACCGTTGTCGGGAGTGTGGAAATCGTAAGTGTTGCTGCAGAACATGCACGGTACCGTCCGCTCATCGACCAGCGACGTTGGGGGATCGGTTGACGAGTCCTTGGTAAAGTTGAGCGGCCCTATGATGGTGCTTTTGGACGCTT                                                                                                                                                         ]
[-] EMBL CNS09HFU             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             AACCCTTGTCGGCAGTGTGGAAATCGTAAGTGTTGCTGCAGAACATGCACGGTACCGTCCGCTCATCGACCAGCGACGTTGGGGGATCGGTTGACGAGTCCTTGGTAAAGTTGAGCGGCCCTATGATGGTGCTTTTGGACGCTTCACCACCTTCATCGT CGTTTGCGTTGGAAAGTTGTGTGCTCATTGCATTAACAGTGGAGAAACGGCAGACTAGGGGTAAATGTAATTATTTTTGCACCGAA                                                   ]




>consensus_8991#0
TTTATTTCCATATTTGCATTGTTAAACCACTTTATTTGTTCAACTTTTTATTTAGTTTTT
TTTTTGAAGCTTTTATTTTATCACAAAAAAACCTCTAAAGTAGTACCGTCGTGTGCTACA
GTTTAAAGTTTTCCAACGATAATGATTCGGCATCGAGATTGATGCTCGCCGTAACGCTCT
CCGATATAACGATCGATCCTTCCTCCTGCGACAGCTCGTCCCGCTCGTTGTCCACCTCCT
CGAGATGGCACAGGAACTGGTCGTCCTCGTACGTGGGAAAGAAGTACTCCGGCTGGTCCC
ACGCACCCGCTTCCTTGTCCAGCCGGAAGTGGTTCAACTCTGCCAGATGCTTGCAAAGAC
TCTCGTAATCAGGGCACTGCTCGCCACATGCAATACACTTGCGTATGTGCATCTGACGGC
GAATAAAGTTCACCACCTTTACGCGCTGATAGAAGCTCATGTCCGCCACCGTTTGATCGA
AATCAAACGTATGCTTCGCCACCATATGGCGCTTCAGCGTGTCCACATTTGCTTCGGCGT
GCGTACAGAACAGACACGTTGTCGTTTGCTCCTCCCCGTTCCAGTCGGACCAATCGGAGT
CGGAGTCGGAGTCGGACGCAAATACGCGGCTTTCCTCTTTCCGCTTCGCGATGGGCACGT
ACTCGGGCTTCTGCTTGAGCCGATAGTTGACGAGAAAGAACCGATCGTAGTAGTGGTTGT
CCGGGTTGATGCGCTTGTGGCCCTTCTTGCGCATGTGTTCCTTGAGCGTGGGCCGATCTT
TGAACAGCTTTTCGCAGAACAAACAGATCAACCGGTTCAGCTTGTCCTGCACGATTTCGA
TCAGCTCGTCCACAAACACCAGATGTTCCGGCTTGCCCAGCAGGAGAAAGTGCTTCGTGT
AGAGATGGCTCACAAACTCGGGGCGCGTTTCCGCCCGATAGTCACGGCAGTACAGGCAGC
CGCGGTAAAAATTCCGATCCGTCCGTTCGAACTGATGGCGGGTGAGGACGAGCTCCAGCT
TCTCCCTTCGCAGCCGTTGCCGCAGCTCGTAGTCCAACGGTTCAACGTCGCTCAGCAGGA
AATACTTCTCGTTCGGTGAGCTCGTACCGTCGGGCAGCTGGTTCAGCAGCATGGAGGAGC
AATATTTCTCCACCGGTTCGTGGGCGAACTTTTCCTTCCAGTAGTAGCAGTAGCTGGGCA
GGCAGGCAATTTCCTTCACATCGGCCACCACCAGTCGGTGGACCAGGTACAGATGGGCCA
GACATTGGTCGGAACCGTTGTCGGCAGTGTGGAAATCGTAAGTGTTGCTGCAGAACATGC
ACGGTACCGTCCGCTCATCGACCAGCGACGTTGGGGGATCGGTTGACGAGTCCTTGGTAA
AGTTGAGCGGCCCTATGATGGTGCTTTTGGACGCTTCACCACCTTCATCGTCGTTTGCGT
TGGAAAGTTGTGTGCTCATTGCATTAACAGTGGAGAAACGGCAGACTAGGGGTAAATGTA
ATTACTTTTGCACCGAAATGGGTTTGTGCACCTGAAGCACAGGAAAACATGTCTTGCGAG
CTGCCGAC

consensusID : consensus_8991#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 807
fasta sequence

                              [AAGAAGGTGCGGCCCACNAANCTCGCAGATGTTTGNCGGCTGGCCCCGCGTCAGGGGAGGAGNANTGTGCTNTTTNGTGCTTTATGGAGATATGGCCTTCTACAAACTCTGCGGGGCCGGCGCTGTCCCGAGCCCCGAATTAAGTTCACGGCCAGGTACCAGGGGCCANCCCGNCGGGTTAAACAAAATTGCGCGAAATGCCGCGTCCCGTGTCGAAAAACNTGNGATTNGGTCCGGGGCTTGAAGGAACGAAAGCTTGCCAGCCTTCNTCCCGCTTTNGCAGCCCGTTTGGCCGCCAGGGTCNGTTAGTCCCAAGCGGTTCAAGCGTCGCTCAGGCAGGAAATACTTCTCNGTTCGGTGANGCTCCGTACCGTCGGCCAGCTGTTCAGCAGCATGGAGGAGCAATATTTCTCCACCGGTTCGTGGGCGAACTTTTCCTTCCAGTAGTAGCAGTAGCTGGGCAGCAGGCAATTTCCTTCACATCGGCCACCACCAGTCGGTGGACCAGGTACAGATGGGCCAGACATTGGTCGGAACCGTTGTCGGCAGTGTGGAAATCGTAAGTGTTGCTGCAGAACATGCACGGTACCGTCCGCTCATCGACCAGCGACGTTGGGGGATCGGTTGACGAGTCCTTGGTAAAGTTGAGCGGCCCTATGATGGTGCTTTTGGACGCTTCACCACCTTCATCGTCGTTTGCGTTGGAAAGTTGTGTGCTCATTGCATTAACAGTGGAGAAACGGCAGACTAGGGGTAAATGTAATACTTTTGCACCGAAATTGATTTGTGCACNTACCTCGTGGCGAT]

[-] EMBL AL934646             [AAGAAGGTGCGGCCCACNAANCTCGCAGATGTTTGNCGGCTGGCCCCGCGTCAGGGGAGGAGNANTGTGCTNTTTNGTGCTTTATGGAGATATGGCCTTCTACAAACTCTGCGGGGCCGGCGCTGTCCCGAGCCCCGAATTAAGTTCACGGCCAGGTACCAGGGGCCANCCCGNCGGGTTAAACAAAATTGCGCGAAATGCCGCGTCCCGTGTCGAAAAACNTGNGATTNGGTCCGGGGCTTGAAGGAACGAAAGCTTGCCAGCCTTCNTCCCGCTTTNGCAGCCCGTTTGGCCGCCAGGGTCNGTTAGTCCCAAGCGGTTCAAGCGTCGCTCAGGCAGGAAATACTTCTCNGTTCGGTGANGCTCCGTACCGTCGGCCAGCTGTTCAGCAGCATGGAGGAGCAATATTTCTCCACCGGTTCGTGGGCGAACTTTTCCTTCCAGTAGTAGCAGTAGCTGGGCAGCAGGCAATTTCCTTCACATCGGCCACCACCAGTCGGTGGACCAGGTACAGATGGGCCAGACATTGGTCGGAACCGTTGTCGGCAGTGTGGAAATCGTAAGTGTTGCTGCAGAACATGCACGGTACCGTCCGCTCATCGACCAGCGACGTTGGGGGATCGGTTGACGAGTCCTTGGTAAAGTTGAGCGGCCCTATGATGGTGCTTTTGGACGCTTCACCACCTTCATCGTCGTTTGCGTTGGAAAGTTGTGTGCTCATTGCATTAACAGTGGAGAAACGGCAGACTAGGGGTAAATGTAATACTTTTGCACCGAAATTGATTTGTGCACNTACCTCGTGGCGAT]
[-] EMBL BX609780             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        CGACCAGCGACGTTGGGGGATCGGTTGACGAGTCCTTGGTAAAGTTGAGCGGCCCTATGATGGTGCTTTTGGACGCTTCACCACCTTCATCGTCGTTTGCGTTGGAAAGTTGTGTGCTCATTGCATTAACAGTGGAGAAACGGCAGAC                                                           ]




>consensus_8991#1
AAGAAGGTGCGGCCCACNAANCTCGCAGATGTTTGNCGGCTGGCCCCGCGTCAGGGGAGG
AGNANTGTGCTNTTTNGTGCTTTATGGAGATATGGCCTTCTACAAACTCTGCGGGGCCGG
CGCTGTCCCGAGCCCCGAATTAAGTTCACGGCCAGGTACCAGGGGCCANCCCGNCGGGTT
AAACAAAATTGCGCGAAATGCCGCGTCCCGTGTCGAAAAACNTGNGATTNGGTCCGGGGC
TTGAAGGAACGAAAGCTTGCCAGCCTTCNTCCCGCTTTNGCAGCCCGTTTGGCCGCCAGG
GTCNGTTAGTCCCAAGCGGTTCAAGCGTCGCTCAGGCAGGAAATACTTCTCNGTTCGGTG
ANGCTCCGTACCGTCGGCCAGCTGTTCAGCAGCATGGAGGAGCAATATTTCTCCACCGGT
TCGTGGGCGAACTTTTCCTTCCAGTAGTAGCAGTAGCTGGGCAGCAGGCAATTTCCTTCA
CATCGGCCACCACCAGTCGGTGGACCAGGTACAGATGGGCCAGACATTGGTCGGAACCGT
TGTCGGCAGTGTGGAAATCGTAAGTGTTGCTGCAGAACATGCACGGTACCGTCCGCTCAT
CGACCAGCGACGTTGGGGGATCGGTTGACGAGTCCTTGGTAAAGTTGAGCGGCCCTATGA
TGGTGCTTTTGGACGCTTCACCACCTTCATCGTCGTTTGCGTTGGAAAGTTGTGTGCTCA
TTGCATTAACAGTGGAGAAACGGCAGACTAGGGGTAAATGTAATACTTTTGCACCGAAAT
TGATTTGTGCACNTACCTCGTGGCGAT

consensusID : consensus_8991#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 637
fasta sequence

                              [CTTCTGCTTGAGCCGATAGTTGACGAGAAAGAACCGATCGTAGTAGTGGTTGTCCGGGTTGATGCGCTTGTGGCCCTTCTTGCGCATGTGTTCCTTGAGCGTGGGCCGATCTTTGAACAGCTTTTCGCAGAACAAACAGATCAACCGGTTCAGCTTGTCCTGCACGATTTCGATCAGCTCGTCCACAAACACCAGATGTTCCGGCTTGCCCAGCAGGAGAAAATGTTTCGTGTAGAGATGGCTCACAAACTCGGGGCGCGTTTCCGCCCGATAGTCACGGCAGTACAGGCAGCCGCGGTTAAAATTCCGATCCGTCCGTTCGAACTGATGGCGGGTGAGGACGAGCTCCAGCTTCTCCCTTCGCAGCCGTTGCCGCAGCTCGTAGTCCAACGGTTCAACGTCGCTTAGCAGGAAATACTTCTCGTTCGGTGAGCTCGTACCGTCCCGGCAGCTGGTTCAGCAGCATGGAGGAGCAATATTTCTCCACCGGTTCGTGGGCGAACTTTTCCTTCCAGTAGTAGCTGGGCAGGCAGGCCCCTTCCTTCACATCGGCCACCACCAGTCGGTGGAAAGTTGTGTGCTCATTGCATTAACAGTGGAGAACTAGGAGAAAATGTAATTACTTTTGCGACGAAAT]

[-] EMBL CNS095KL             [CTTCTGCTTGAGCCGATAGTTGACGAGAAAGAACCGATCGTAGTAGTGGTTGTCCGGGTTGATGCGCTTGTGGCCCTTCTTGCGCATGTGTTCCTTGAGCGTGGGCCGATCTTTGAACAGCTTTTCGCAGAACAAACAGATCAACCGGTTCAGCTTGTCCTGCACGATTTCGATCAGCTCGTCCACAAACACCAGATGTTCCGGCTTGCCCAGCAGGAGAAAATGTTTCGTGTAGAGATGGCTCACAAACTCGGGGCGCGTTTCCGCCCGATAGTCACGGCAGTACAGGCAGCCGCGGTTAAAATTCCGATCCGTCCGTTCGAACTGATGGCGGGTGAGGACGAGCTCCAGCTTCTCCCTTCGCAGCCGTTGCCGCAGCTCGTAGTCCAACGGTTCAACGTCGCTTAGCAGGAAATACTTCTCGTTCGGTGAGCTCGTACCGTCCCGGCAGCTGGTTCAGCAGCATGGAGGAGCAATATTTCTCCACCGGTTCGTGGGCGAACTTTTCCTTCCAGTAGTAGCTGGGCAGGCAGGCCCCTTCCTTCACATCGGCCACCACCAGTCGGTGGAAAGTTGTGTGCTCATTGCATTAACAGTGGAGAACTAGGAGAAAATGTAATTACTTTTGCGACGAAAT]




>consensus_8991#2
CTTCTGCTTGAGCCGATAGTTGACGAGAAAGAACCGATCGTAGTAGTGGTTGTCCGGGTT
GATGCGCTTGTGGCCCTTCTTGCGCATGTGTTCCTTGAGCGTGGGCCGATCTTTGAACAG
CTTTTCGCAGAACAAACAGATCAACCGGTTCAGCTTGTCCTGCACGATTTCGATCAGCTC
GTCCACAAACACCAGATGTTCCGGCTTGCCCAGCAGGAGAAAATGTTTCGTGTAGAGATG
GCTCACAAACTCGGGGCGCGTTTCCGCCCGATAGTCACGGCAGTACAGGCAGCCGCGGTT
AAAATTCCGATCCGTCCGTTCGAACTGATGGCGGGTGAGGACGAGCTCCAGCTTCTCCCT
TCGCAGCCGTTGCCGCAGCTCGTAGTCCAACGGTTCAACGTCGCTTAGCAGGAAATACTT
CTCGTTCGGTGAGCTCGTACCGTCCCGGCAGCTGGTTCAGCAGCATGGAGGAGCAATATT
TCTCCACCGGTTCGTGGGCGAACTTTTCCTTCCAGTAGTAGCTGGGCAGGCAGGCCCCTT
CCTTCACATCGGCCACCACCAGTCGGTGGAAAGTTGTGTGCTCATTGCATTAACAGTGGA
GAACTAGGAGAAAATGTAATTACTTTTGCGACGAAAT

consensusID : consensus_8991#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 549
fasta sequence

                              [GAGTCACCCTATTAAACCACTTTATTTGTTCAACTTTTTATTTTGCTTTTTTTTTGAAGCTTTTATTTTATCACAAAAAAACCTCTAAAGTAGTACCGTCGCGTGCTACAGTTTAAAGTTTTCCAACGATAATGAGTCGGCATCGAGATTGATGCTCGCCGTAACGCTCTCCGATATAACGATCGATCCTTCCTCCTGCGACACTCGTCTCGCTCGTTGTCCACCTCCTCGAGATGGCACAGGAACTGGTCGTCCTCGTACGTGGGAAAGCAAGTACTCCGGCTGGTCCCACGCACCCGCTTCCTTGTCCAGCCGGAAGTGGTTCAACTCTGCCAGATGCTTGCAAAGACTCTCGTAATCGGGGCACTGCTCGCCACACGCAATACACTTGCGTATGTGCATCTGACGGCGAATAAAGTTCACCACCTTTACGCGCTGATAGAAGCTCATGTCCGCCACGGTTTGATCGAAATCAAACGTATGCTTCGCCACCATATGGCGCTTCAGCGTGTCCACATTTGCTTTGGCGTGCGTACAGAACAGACACGT]

[+] EMBL CNS095KM             [GAGTCACCCTATTAAACCACTTTATTTGTTCAACTTTTTATTTTGCTTTTTTTTTGAAGCTTTTATTTTATCACAAAAAAACCTCTAAAGTAGTACCGTCGCGTGCTACAGTTTAAAGTTTTCCAACGATAATGAGTCGGCATCGAGATTGATGCTCGCCGTAACGCTCTCCGATATAACGATCGATCCTTCCTCCTGCGACACTCGTCTCGCTCGTTGTCCACCTCCTCGAGATGGCACAGGAACTGGTCGTCCTCGTACGTGGGAAAGCAAGTACTCCGGCTGGTCCCACGCACCCGCTTCCTTGTCCAGCCGGAAGTGGTTCAACTCTGCCAGATGCTTGCAAAGACTCTCGTAATCGGGGCACTGCTCGCCACACGCAATACACTTGCGTATGTGCATCTGACGGCGAATAAAGTTCACCACCTTTACGCGCTGATAGAAGCTCATGTCCGCCACGGTTTGATCGAAATCAAACGTATGCTTCGCCACCATATGGCGCTTCAGCGTGTCCACATTTGCTTTGGCGTGCGTACAGAACAGACACGT]




>consensus_8991#3
GAGTCACCCTATTAAACCACTTTATTTGTTCAACTTTTTATTTTGCTTTTTTTTTGAAGC
TTTTATTTTATCACAAAAAAACCTCTAAAGTAGTACCGTCGCGTGCTACAGTTTAAAGTT
TTCCAACGATAATGAGTCGGCATCGAGATTGATGCTCGCCGTAACGCTCTCCGATATAAC
GATCGATCCTTCCTCCTGCGACACTCGTCTCGCTCGTTGTCCACCTCCTCGAGATGGCAC
AGGAACTGGTCGTCCTCGTACGTGGGAAAGCAAGTACTCCGGCTGGTCCCACGCACCCGC
TTCCTTGTCCAGCCGGAAGTGGTTCAACTCTGCCAGATGCTTGCAAAGACTCTCGTAATC
GGGGCACTGCTCGCCACACGCAATACACTTGCGTATGTGCATCTGACGGCGAATAAAGTT
CACCACCTTTACGCGCTGATAGAAGCTCATGTCCGCCACGGTTTGATCGAAATCAAACGT
ATGCTTCGCCACCATATGGCGCTTCAGCGTGTCCACATTTGCTTTGGCGTGCGTACAGAA
CAGACACGT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8991#0      ----------------TTTATTTCCATATTTGCATTGTTAAACCACT--TTATTTGTTCA 42
consensus_8991#3      --------------------------GAGTCACCCTATTAAACCACT--TTATTTGTTCA 32
consensus_8991#2      CTTCTGCTTGAGCCGATAGTTGACGAGAAAGAACCGATCGTAGTAGTGGTTGTCCGGGTT 60
consensus_8991#1      -------------------------------------------------AAGAAGGTGCG 11
                                                                             *    

consensus_8991#0      ACTT-TTTATTTAGTTTTTTTTTTGAAGCTTTTATTTTATCACAAAAAAACCTCTAAA-- 99
consensus_8991#3      ACTT-TTTATTTTGCTTTTTTTTTGAAGCTTTTATTTTATCACAAAAAAACCTCTAAA-- 89
consensus_8991#2      GATG-CGCTTGTGGCCCTTCTTGCGCATGTGTTCCTTGAGCGTGGGCCGATCTTTGAACA 119
consensus_8991#1      GCCCACNAANCTCGCAGATGTTTGNCGGCTGGCCCCGCGTCAGGGGAGGAGNANTGTG-- 69
                                 * *    * **       *          *        *    *     

consensus_8991#0      -------GTAGTACCGTCGTGTGCTACAGTTTAAAGTTTTCCA-ACGATAATGATTCGGC 151
consensus_8991#3      -------GTAGTACCGTCGCGTGCTACAGTTTAAAGTTTTCCA-ACGATAATGAGTCGGC 141
consensus_8991#2      GCTTTTCGCAGAACAAACAGATCAACCGGTTCAGCTTGTCCTGCACGATTTCGA-TCAGC 178
consensus_8991#1      --------CTNTTTNGTGCTTTATGGAGATATGGCCTTCTACAAACTCTGCGGGGCCGGC 121
                                           *       *      *       **  *   *   * **

consensus_8991#0      ATCGAGATTGATGCTCGCCGTAACGCTCTCCGATATAACGATCGATCCTTCCTCCTGCGA 211
consensus_8991#3      ATCGAGATTGATGCTCGCCGTAACGCTCTCCGATATAACGATCGATCCTTCCTCCTGCGA 201
consensus_8991#2      TCGTCCACAAACACCAGATGTTCCGGCTTGCCCAGCAGGAGAAAATGTTTCGTGTAGAGA 238
consensus_8991#1      GCTGTCCCGAGCCCCGAATTAAGTTCACGGCCAGGTACCAGGGGCCANCCCGNCGGGTTA 181
                                   *                *     *             *     *  *

consensus_8991#0      CAGCTCGT---CCCG---CTCGTTGTCCACC--TCCTCGAGATGGCACAGGAACTGGTCG 263
consensus_8991#3      CA-CTCGT---CTCG---CTCGTTGTCCACC--TCCTCGAGATGGCACAGGAACTGGTCG 252
consensus_8991#2      TGGCTCACAAACTCGGGGCGCGTTTCCGCCCGATAGTCACGGCAGTACAGGCAGCCGCGG 298
consensus_8991#1      AACAAAAT---TGCGCGAAATGCCGCGTCCC--GTGTCGAAA-AACNTGNGATTNGGTCC 235
                                   **      *       **     **            *     *   

consensus_8991#0      TC------CTCGTACGTGGGAAAG-AAGTACTCCGGCTGGTCCCACGCACCCGCTTCCTT 316
consensus_8991#3      TC------CTCGTACGTGGGAAAGCAAGTACTCCGGCTGGTCCCACGCACCCGCTTCCTT 306
consensus_8991#2      TTAAAATTCCGATCCGTCCGTTCGAACTGATGGCGGGTGAGGACGAGCTCCAGCTTCTCC 358
consensus_8991#1      GG--------GGCTTGAAGGAACGAAAGCTTGCCAGCCTTCNTCCCGCTTTNGCAGCCC- 286
                                     *   *   * *       * *       *  **    **  *   

consensus_8991#0      GTCCAGCCGGAAGTGGTTCAACTCT--GCCAGATGCTTGCAAAGACTCTCGTAATCAGGG 374
consensus_8991#3      GTCCAGCCGGAAGTGGTTCAACTCT--GCCAGATGCTTGCAAAGACTCTCGTAATCGGGG 364
consensus_8991#2      CTTC-GCAGCCGTTGCCGCAGCTCGTAGTCCAACGGTT-CAACGTCGCTTAGCAG-GAAA 415
consensus_8991#1      GTTTGGCCGCCAGGG--TCNGTTAGT-CCCAAGCGGTTCAAGCGTCGCTCAGGCAGGAAA 343
                       *   ** *     *   *   *      *    * **  *  * * **           

consensus_8991#0      CACTGCTCGCC------ACATGCAATACACTTG--CGTATG-TGCATCTG-ACGGCGAAT 424
consensus_8991#3      CACTGCTCGCC------ACACGCAATACACTTG--CGTATG-TGCATCTG-ACGGCGAAT 414
consensus_8991#2      TACTTCTCGTTCGGTGAGCTCGTACCGTCCCGG--CAGCTGGTTCAGCAGCATGGAGGAG 473
consensus_8991#1      TACTTCTCNGTTCGGTGANGCTCCGTACCGTCGGCCAGCTG-TTCAGCAGCATGGAGGAG 402
                       *** ***                        *  *   ** * ** * * * ** * * 

consensus_8991#0      AAAGTTCACCACCTTTACGCGCTGATAGAAGCTCATGTCCGCCA-CCGT-----TTGATC 478
consensus_8991#3      AAAGTTCACCACCTTTACGCGCTGATAGAAGCTCATGTCCGCCA-CGGT-----TTGATC 468
consensus_8991#2      CAATATTTCTCCACCGGTTCGTGGGCGAACTTTTCCTTCCAGTAGTAGC-----TGGGCA 528
consensus_8991#1      CAATATTTCTCCACCGGTTCGTGGGCGAACTTTTCCTTCCAGTAGTAGCAGTAGCTGGGC 462
                       **  *  *  *       **  *    *   *    ***   *   *        *   

consensus_8991#0      GAAA-------TCAAACGTATGCTTCGCCACCATATGGCGCTTCAG-------CGTGTCC 524
consensus_8991#3      GAAA-------TCAAACGTATGCTTCGCCACCATATGGCGCTTCAG-------CGTGTCC 514
consensus_8991#2      GGCAGGCCCCTTCCTTCACATCGGCCACCACCAGTCGGTGGAAAGT-------TGTGTGC 581
consensus_8991#1      AGCAGGCAATTTCCTTCACATCGGCCACCACCAGTCGGTGGACCAGGTACAGATGGGCCA 522
                         *       **   *  **    * ******   ** *              * *   

consensus_8991#0      ACATTTGCTTCGGCGTGC-GTACAGAACAGACACGTTGTCGTTTGCTCCTCCCCGTTCCA 583
consensus_8991#3      ACATTTGCTTTGGCGTGC-GTACAGAACAGACACGT------------------------ 549
consensus_8991#2      TCATTGCATTAACAGTGGAGAACTAGGAGAAAATGTAATTACTTTTGCGACGAAAT---- 637
consensus_8991#1      GACATTGGTCGGAACCGTTGTCGGCAGTGTGGAAATCGTAAGTGTTGCTGCAGAACATGC 582
                          *   *       *  *            *  *                        

consensus_8991#0      GTCGGACCAATCGGAGTCGGAGTCGGAGTCGGACGCAAATACGCGGCTTTCCTCTTTCCG 643
consensus_8991#3      ------------------------------------------------------------
consensus_8991#2      ------------------------------------------------------------
consensus_8991#1      ACGGTACCGTCCGCTCATCGACCAGCGACGTTGGGGGATCGGTTGACGAGTCCTTGGTAA 642
                                                                                  

consensus_8991#0      CTTCGCGATGGGCACGTACTCGGGCTTCTGCTTGAGCCGATAGTTGACGAGAAAGAACCG 703
consensus_8991#3      ------------------------------------------------------------
consensus_8991#2      ------------------------------------------------------------
consensus_8991#1      AGTTGAGCGGCCCTATGATGGTGCTTTTGGACGCTTCACCACCTTCATCGTCGTTTGCGT 702
                                                                                  

consensus_8991#0      ATCGTAGTAGTGGTTGTCCGGGTTGATGCGCTTGTGGCCCTTCTTGCGCATGTGTTCCTT 763
consensus_8991#3      ------------------------------------------------------------
consensus_8991#2      ------------------------------------------------------------
consensus_8991#1      TGGAAAGTTGTGTGCTCATTGCATTAACAGTGGAGAAACGGCAGACTAGGGGTAAATGTA 762
                                                                                  

consensus_8991#0      GAGCGTGGGCCGATCTTTGAACAGCTTTTCGCAGAACAAACAGATCAACCGGTTCAGCTT 823
consensus_8991#3      ------------------------------------------------------------
consensus_8991#2      ------------------------------------------------------------
consensus_8991#1      ATACTTTTGCACCGAAATTGATTTGTGCACNTACCTCGTGGCGAT--------------- 807
                                                                                  

consensus_8991#0      GTCCTGCACGATTTCGATCAGCTCGTCCACAAACACCAGATGTTCCGGCTTGCCCAGCAG 883
consensus_8991#3      ------------------------------------------------------------
consensus_8991#2      ------------------------------------------------------------
consensus_8991#1      ------------------------------------------------------------
                                                                                  

consensus_8991#0      GAGAAAGTGCTTCGTGTAGAGATGGCTCACAAACTCGGGGCGCGTTTCCGCCCGATAGTC 943
consensus_8991#3      ------------------------------------------------------------
consensus_8991#2      ------------------------------------------------------------
consensus_8991#1      ------------------------------------------------------------
                                                                                  

consensus_8991#0      ACGGCAGTACAGGCAGCCGCGGTAAAAATTCCGATCCGTCCGTTCGAACTGATGGCGGGT 1003
consensus_8991#3      ------------------------------------------------------------
consensus_8991#2      ------------------------------------------------------------
consensus_8991#1      ------------------------------------------------------------
                                                                                  

consensus_8991#0      GAGGACGAGCTCCAGCTTCTCCCTTCGCAGCCGTTGCCGCAGCTCGTAGTCCAACGGTTC 1063
consensus_8991#3      ------------------------------------------------------------
consensus_8991#2      ------------------------------------------------------------
consensus_8991#1      ------------------------------------------------------------
                                                                                  

consensus_8991#0      AACGTCGCTCAGCAGGAAATACTTCTCGTTCGGTGAGCTCGTACCGTCGGGCAGCTGGTT 1123
consensus_8991#3      ------------------------------------------------------------
consensus_8991#2      ------------------------------------------------------------
consensus_8991#1      ------------------------------------------------------------
                                                                                  

consensus_8991#0      CAGCAGCATGGAGGAGCAATATTTCTCCACCGGTTCGTGGGCGAACTTTTCCTTCCAGTA 1183
consensus_8991#3      ------------------------------------------------------------
consensus_8991#2      ------------------------------------------------------------
consensus_8991#1      ------------------------------------------------------------
                                                                                  

consensus_8991#0      GTAGCAGTAGCTGGGCAGGCAGGCAATTTCCTTCACATCGGCCACCACCAGTCGGTGGAC 1243
consensus_8991#3      ------------------------------------------------------------
consensus_8991#2      ------------------------------------------------------------
consensus_8991#1      ------------------------------------------------------------
                                                                                  

consensus_8991#0      CAGGTACAGATGGGCCAGACATTGGTCGGAACCGTTGTCGGCAGTGTGGAAATCGTAAGT 1303
consensus_8991#3      ------------------------------------------------------------
consensus_8991#2      ------------------------------------------------------------
consensus_8991#1      ------------------------------------------------------------
                                                                                  

consensus_8991#0      GTTGCTGCAGAACATGCACGGTACCGTCCGCTCATCGACCAGCGACGTTGGGGGATCGGT 1363
consensus_8991#3      ------------------------------------------------------------
consensus_8991#2      ------------------------------------------------------------
consensus_8991#1      ------------------------------------------------------------
                                                                                  

consensus_8991#0      TGACGAGTCCTTGGTAAAGTTGAGCGGCCCTATGATGGTGCTTTTGGACGCTTCACCACC 1423
consensus_8991#3      ------------------------------------------------------------
consensus_8991#2      ------------------------------------------------------------
consensus_8991#1      ------------------------------------------------------------
                                                                                  

consensus_8991#0      TTCATCGTCGTTTGCGTTGGAAAGTTGTGTGCTCATTGCATTAACAGTGGAGAAACGGCA 1483
consensus_8991#3      ------------------------------------------------------------
consensus_8991#2      ------------------------------------------------------------
consensus_8991#1      ------------------------------------------------------------
                                                                                  

consensus_8991#0      GACTAGGGGTAAATGTAATTACTTTTGCACCGAAATGGGTTTGTGCACCTGAAGCACAGG 1543
consensus_8991#3      ------------------------------------------------------------
consensus_8991#2      ------------------------------------------------------------
consensus_8991#1      ------------------------------------------------------------
                                                                                  

consensus_8991#0      AAAACATGTCTTGCGAGCTGCCGAC 1568
consensus_8991#3      -------------------------
consensus_8991#2      -------------------------
consensus_8991#1      -------------------------