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Anopheles gambiae
cluster # 8998 cluster # 8998       Sequences # 13       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8998#0 length = 1338 sequences # 12  
consensus_8998#1 length = 554 sequences # 1  

consensusID : consensus_8998#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 12
consensus length = 1338
fasta sequence
                              [GCTCAGGCAGACCGCCGACGCGTGCG-GCCTGAAGCGCCCGTAACGTTTGG-TGCAAAAGTGTCCTGCCAATTGTTGGTGCGAATTTAGCTTTACTTTGAACAGGAAAGCAACTTAATCCATTCCGTGCTGGTGATAGACGTTGGCGATTGGCAAACAAACGGAAAAGGAGACTTTTCCCCCCTCGAAACGCCCGTGTCGGCACAGCATGAGCAACTCCGAGAGCAGCAGTAGCAGCAGCGGCAGCGGCAGCAGCAGTAGCGGTAGCAAAAATGCAA-AATCAGAAGAGAATCAGGACGAGCTGATTATAAAACAGCAGCGCGAAATTGAACAAGA-GATTGCGCATTCCAATCCGC-TAGTCAGTGAGTCGCAACCGATCGCCAGCCTCAACCAGGAGTACCTGGACGATCCGGTGTACATATCAAAGATTAA-GGATCTCTCCACCAAGTACCGGGCGATACGGCGCAGCCGGCCGGACGGCAACTGCTTCTTCCGCGCGTTCGCGTACGCGTACCTCGAGTACCTGGTGCGGAACAAGGACGAGTTTCAAAAGTTCTACGAGTATGCGTCCAAATCGAGGGAGCGGC-TAACCGAGGCCGGCTTCCCGCCGTTCACGATCGAGGAC-TTTTACGAAACGTTCATGGAGGTGATCGGCAAGGTGAAGCCGGAGGGCGACAATACGGCCGCTGCCCTGGCCGAGCTGCACAAGCTGTTCAACGAGCAGGGCTACTCGGACTACGTGGTGGTGTATCTGCGCCTGATCACCTCGAGCCATCTGCAGGAGAAGGCCGACTTTTATCAGAACTTTATCGACGGGAACATTACGATCGTGGAGTTCTGCCACCAGGAGGTGGAACCGATGTACAAGGAGTCGGACCACATTCACATCATCGCCATCTGCTCGGCGCTGGATGCGGGCGTGCGGGTCGAGTACATGGACCGGGGCGATGGGAACCAGGTGATTGCTCACGATTTTCCGGACGGCTTCAAGCCGAACGTCTATCTGCTGTACCGTCCCGGGCATTACGATATACTGTATCCCAACCACGGTGAGGCGTAAGC-GGTGCTGTGTGTCCCGTCAGCGGCCGGAGGAGCATATTTGTAGGATGTAATAATAATAATAATAATAATAATCGTTGGCAGCGCCGCAAACTTACCAACGAATGCACCCTGCTCTGTCTCTCGTATAATGATGTCTCTTTGTTTCCTGCAAAA-CCCCCCTCCCGTTCAGGATTATTCAGTACTTCTCTTTGTCGATACCGAACACACACACAACCACACATACACGGCTAGTATGCTACTCAAAATAAAAAATAAAATGTAC-GGAAGAATCGTAATAAA]

[+] EMBL BX466508             [GCTCAGGCAGAATCCCGACGAGTG G AACTGAAGCGCCCGTAACGTTTGGCTGCAAAAGTGT CTGCCAATTGTTGGTGCGAATTTAGCTTTACTTTGAACAGGAAAGCAACTTTATCCATTCCGTGCTGGTGATAGCCGTTGGCGATTGGCAAACAAACGGAAAAGGAGACTTTT CCCCCTCGAAACGCCCGTGTCGGCACAGCATGAGCAACTCCGAGAGCAGCAGTAGCAGCAGCGGCAGCGGCAGCAGCAGTAGCGGTAGCAAAAATGCAACAATCAGAAGAGAATCAGGACGAGCTGATTATAAAACAGCAGCGCGAAATTGAACAAGAGGATTGCGCATTCCAATCCGCGTAGTCAGTGAGTCGCAACCGATCGCCAGCCTCAACCAGGAGTACCTGGACGATCCGGTGTACATATCAGAGATTAANGGATCTCTCCACCAAGTACCGGGCGATACGGCGCAACCGGCCGGACGGCAACTGCTTCTTCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL BM604274             [           CCGCGGACGCGTGGG GCCTGAAGCGCCCGTAACGTTTGG TGCAAAAGTGTCCTGCCAATTGTTGGTGCGAATTTAGCTTTACTTTGAACAGCAAAGCAACTTTATCCATTCCGTGCTGGTGATAGGCGTT  CGATTGGCAAACAAACGGAAAAGGAGACTTTTCCCCCCTCGAAACGCCCGTGTCGGCACAGCATGAGCAACTCCGAGAGCAGCAGTAGCAGCAGCGGCAGCGGCAGCAGCAGTAGCGGTAGCAAAAATGCAA AATCAGAAGAGAATCAGGACGAGCTGATTATAAAACAGCAGCGCGAAATTGAACAAGA GATTGCGCATTCCAATCCGC TAGTCAGTGAGTCGCAACCGATCGCCAGCCTCAACCAGGAGTACCTGGACGATCCGGTGTACATATCAAAGATTAA GGATCTCTCCACCAAGTACCGGGCGATACGGCGCAGCCGGCCGGACGGCAACTGCTTCTTCCGCGCGTTCGCGTACGCGTACCTCGAGTACCTGGTGCGGAACAAGGACGAGTTTCAAAAGTTCTACGAGTATGCGTCCAAATCGAGGGAGCGGCTTAACCGAGGCCGGCTTCCCGCCGTTCACGATCGAGGACTTTTTACGAAcg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL BM592420             [           CCGCCCACGCGTCCGCGCCTGAAGCGCCCGTAACGTTTGG TGCAATAGTGTCCTGCCAATTGTTGGTGCGAATTTAGCTTTACTTTGAACAGGAAAGCAACTTTATCCATTCCGTGCAGGAGATAGGCGTT  CGATTGGCAAACAAACGGAAAAGGAGACTTTTCCCCCCTCGAAAGGCCCGTGTCGGCACAGCATGAGCAACTCCGAGAGCAGCAGTAGCAGCAGCGGCAGCGGCAGCAGCAGTAGCGGTAGCAAAAATGCAA AATCAGAAGAGAATCAGGACGAGCTGATTATAAAACAGCAGCGCGAAATTGAACAAGA GATTGCGCATTCCAATCCGC TAGTCAGTGAGTCGCAACCGATCGCCAGCCTCAACCAGGAGTACCTGGACGATCCGGTGTACATATCAAAGATTAA GGATCTCTCCACCAAGTACCGGGCGATACGGCGCAGCCGGCCGGACGGCAACTGCTTCTTCCGCGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL BX606094             [                       GCC GCCTGAAGCGCCCGTAACGTTTGG TGCAAAAGTGTCCTGCCAATTGTTGGTGCGAATTTAGCTTTACTTTGAACAGGAAAGCAACTTAATCCATTCCGTGCTGGTGATAGACGTTGGCGATTGGCAAACAAACGGAAAAGGAAACTTTTCCCCCCTCGAAACGCCCGTGTCGGCACAGCATGAGCAACTCCGAGAGCAGCAGTAGCAGCAGCGGCAGCGGCAGCAGCAGTAGCGGTAGCAAAAATGCAA AATCAGAAGAGAATCAGGACGAGCTGATTATAAAACAGCAGCGCGAAATTGAACAAGA GATTGCTCATTCCAATCCGC TAGTCAGTGAGTCGCAACCGATCGCCAGCCTCAACCAGGAGTACCTGGACGATCCGGTGTACATATCAAAGATTAA GGATCTCTCCACCAAGTACCGGGCGATACGGCGCAGCCGGCCGGACGGCAACTGCTTCTTCCGCGCGTTCGCGTACGCGTACCTCGAGTACCTGGTGCGGAACAAGGACGAGTTTCAAAAGTTCTACGAGTATGCGTCCAAATCGAGGGAGCGGC TAACCGAGGCCGGCTTCCCGCCGTTCACGATCGAGGAC TTTTACGAAACGTTCATGGAGGTGATCGGCAAGGTGAAGCCGGAGGGCGACAATACGGCCGCTGCCCTGGCCGAGCTGCACAAGCTGTTCAACGAGCAGGGCTACTCGGACTACGTGGTGGTGTATCTGCGCCTGATCACCTCGAGCCATCTGCAGGAGAAag                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL BM606444             [                               ccgGCGCCCGTAACGTTTGG TGCAAAAGTGTCCTGCCAATTGTTGGTGCGAATTTAGCTTTACTTTGAACAGGAAAGCAACTTAATCCATTCCGTGCTGGTGATAGACGTTGGCGATTGGCAAACAAACGGAAAAGGAAACTTTTCCCCCCTCGAAACGCCCGTGTCGGCACAGCATGAGCAACTCCGAGAGCAGCAGTAGCAGCAGCGGCAGCGGCAGCAGCAGTAGCGGTAGCAAAAATGCAA AATCAGAAGAGAATCAGGACGAGCTGATTATAAAACAGCAGCGCGAAATTGAACAAGA GATTGCTCATTCCAATCCGC TAGTCAGTGAGTCGCAACCGATCGCCAGCCTCAACCAGGAGTACCTGGACGATCCGGTGTACATATCAAAGATTAA GGATCTCTCCACCAAGTACCGGGCGATACGGCGCAGCCGGCCGGACGGCAACTGCTTCTTCCGCGCGTTCGCGTACGCGTACCTCGAGTACCTGGTGCGGAACAAGGACGAGTTTCAAAAGTTCTACGAGTATGCGTCCAAATCGAGGGAGCGGC TAACCGAGGCCGGCTTCCCGCCGTTCACGATCGAGGAC TTTTACGAAACGTTCATGGAGGTGATCGGCAAGGTGAAGCCGGAGGGCGACAATACGGCCGCTGCCCTGGCCGAGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL AL930870             [                                     CCCG  AGGTTTGG TGC AAAGTGT CTGCCAACTGTTGGTGCGAATTTAGCTTTACTTTGAACAAGAAAGCAACTTAATCCATTCCGTGCTGGTGATAGACG TGGCGA TGGCAAACAAACGGAAAAGGAGACTTTTCCCCCCTCGAAACACCCGTGTCGGCACAGCATGAGCAACTCCGAGAGCAGCAGTAGCAGCAGCGGCAGCGGCAGCAGCAGTAGCGGTAGCAAAAATGCAA AATCAGAAGAGAATCAGGACGAGCTGATTATAAAACAGCAGCGCGAAATCGAACAAGA GATTGCGCATTCCAATCCGC TAGTCAGTGAGTCGCAACCGATCGCCAGCCTCAACCAGGAGTACCTGGACGATCCGGTGTACATATCAAAGATTAA GGATCTCTCCACCAAGTACCGGGCGATACGGCGCAGCCGGCCGGACGGCAACTGCTTCTTCCGCGCGTTCGCGTACGCGTACCTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL BX607852             [                                                                     AATTGTTGGTGCGAATTTAGCTTTACTTTGAACAAGAAAGCAACTTAATCCATTCCGTGCTGGTGATAGACGTTGGCGATTGGCAAACAAACGGAAAAGGAGACTTTTCCCCCCTCGAAACACCCGT   GGCACAGCATGAGCAACTCCGAGAGCAGCAGTAGCAGCAGCGGCAGCAGCAGCAGCAG  GCGGTAGCAAAAATGCAA AATCAGAAGAGAATCAGGACGAGCTGATTATAAAACAGCAGCGCGAAATCGAACAAGA GATTGCGCATTCCAATCCGC TAGTCAGTGAGTCGCAACCGATCGCCAGCCTCAACCAGGAGTACCTGGACGATCCGGTGTACATATCAAAGATTAA GGATCTCTCCACCAAGTACCGGGCGATACGGCGCAGCCGGCCGGACGGCAACTGCTTCTTCCGCGCGTTCGCGTACGCGTACCTCGAGTACCTGGTGCGGAACAAGGACGAGTTTCAAAAGTTCTACGAGTATGCGTCCAAATCGAGGGAGCGGC TAACCGAGGCCGGCTTCCCGCCGTTCACGATCGAGGAC TTTTACGAAACGTTCATGGAGGTGATCGGTAAGGTGAAGCCGGAGGGCGACAATACGGCCGCTGCCCTGGCCGAGCTGCACAAGCTGTTCAACGAACAGGGCTACTCGGACTACGTGGTGGTGTATCTGCGCCTGATCACCTCGAGCCATCTGCAGGAGAAGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL BX624878             [                                                                                                                                                                      AGGAGACTTTTCCCCCCTCGAAACACCCGTGTCGGCACAGCATGAGCAACTCCGAGAGCAGCAGTAGCAGCAGCGGCAGCGGCAGCAGCAGTAGCGGTAGCAAAAATGCAA AATCAGAAGAGAATCAGGACGAGCTGATTATAAAACAGCAGCGCGAAATCGAACAAGA GATTGCGCATTCCAATCCGC TAGTCAGTGAGTCGCAACCGATCGCCAGCCTCAACCAGGAGTACCTGGACGATCCGGTGTACATATCAAAGATTAA GGATCTCTCCACCAAGTACCGGGCGATACGGCGCAGCCGGCCGGACGGCAACTGCTTCTTCCGCGCGTTCGCGTACGCGTACCTCGAGTACCTGGTGCGGAACAAGGACGAGTTTCAAAAGTTCTACGAGTATGCGTCCAAATCGAGGGAGCGGC TAACCGAGGNCGGCTTCCCGCCGTTCACGATCGAGGAC TTTTACGAAACGTTCATGGAGGTGATCGGTAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL BM583041             [                                                                                                                                                                                                                                                                       ccGCAAAAATGCAA AATCAGAAGAGAATCAGGACGAGCTGATTATAAAACAGCAGCGCGAAATTGAACAAGA GATTGCTCATTCCAATCCGC TAGTCAGTGAGTCGCAACCGATCGCCAGCCTCAACCAGGAGTATCTGGACGATCCGGTGTACATATCAAAGATTAA GGATCTCTCCACCAAGTACCGGGCGATACGGCGCAGCCGGCCGGACGGCAACTGCTTCTTCCGCGCGTTCGCGTACGCGTACCTCGAGTACCTGGTGCGGAACAAGGACGAGTTTCAAAAGTTCTACGAGTATGCGTCCAAATCGAGGGAGCGGC TAACCGAGGCCGGCTTCCCGCCGTTCACGATCGAGGAC TTTTACGAAACGTTCATGGAGGTGATCGGCAAGGTGAAGCCGGAGGGCGACAATACGGCCGCTGCCCTGGCCGAGCTGCACAAGCTGTTCAACGAGCAGGGCTACTCGGACTACGTGGTGGTGTATCTGCGCCTGATCACCTCGAGCCATCTGCAGGAGAAGGCCGACTTTTATCAGAACTTTATCGACGGGAACATTACGATCGTGGAGTTCTGCCACCAGGAGGTGGAACCGATGTACAAGGAGTCGGACCACATTCACATCATCGCCATCTGCTCGGCGCTGGA                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL BM622793             [                                                                                                                                                                                                                                                                                                                                                                                                                                                    ccgCTCTCCACCAAGTACCGGGCGATACGGCGCAGCCGGCCGGACGGCAACTGCTTCTTCCGCGCGTTCGCGTACGCGTACCTCGAGTACCTGGTGCGGAACAAGGACGAGTTTCAAAAGTTCTACGAGTATGCGTCCAAATCGAGGGAGCGGC TAACCGAGGCCGGCTTCCCGCCGTTCACGATCGAGGAC TTTTACGAAACGTTCATGGAGGTGATCGGCAAGGTGAAGCCGGAGGGCGACAATACGGCCGCTGCCCTGGCCGAGCTGCACAAGCTGTTCAACGAGCAGGGCTACTCGGACTACGTGGTGGTGTATCTGCGCCTGATCACCTCGAGCCATCTGCAGGAGAAGGCCGACTTTTATCAGAACTTTATCGACGGGAACATTACGATCGTGGAGTTCTGCCACCAGGAGGTGGAACCGATGTACAAAGAGTCGGACCACATTCACATCATCGCCATCTGCTCGGCGCTGGATGCGGGCGTGCGGGTCGAGTACATGGACCGGGGCGATGGGAACCAGGTGATTGCTCACGATTTTCCGGACGGCTTCAAGCCGAACGTCTATCTGCTGTACCGTCCCGGGCATTACGATATACTGTATCCCAACCACGGTGAGGCGTAAGCGGGTGCTGTGTGTCCCGTC                                                                                                                                                                                                                                                                       ]
[+] EMBL BM593313             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            cCGGCCGCTGCCCTGGCCGAGCTGCACAAGCTGTTCAACGAGCAGGGCTACTCGGACTACGTGGTGGTGTATCTGCGCCTGATCACCTCGAGCCATCTGCAGGAGAAGGCCGACTTTTATCAGAACTTTATCGACGGGAACATTACGATCGTGGAGTTCTGCCACCAGGAGGTGGAACCGATGTACAAGGAGTCGGACCACATTCACATCATCGCCATCTGCTCGGCGCTGGATGCGGGCGTGCGGGTCGAGTATATGGACCGGGGCGATGGGAACCAGGTGATTGCTCACGATTTCCCGGACGGCTTCAAGCCGAACGTCTATCTGCTGTACCGTCCCGGGCATTACGATATACTGTATCCCAACCACGGTGAGGCGTAAGC GGTGCTGTGTGTCCCGTCAGCGGCCGGAGGAGCATATTTGTAGGATGTAATAATAATAATAATAATAATAATCGTTGGCAGCGCCGCAAACTTACCAACGAATGCACCCTGCTCTGTCTCTCGTATAATGATGTCTCTTTGTTTCCTGCAAAA CCCCCCTCCCGTTCAGGATTATTCAGTACTTCTCTTTGTCGATACCGAACACACACACAACCACACATACACGGCTAGTATGCTACTCAAAATAAAAAATAAAATGTAC GGAAGAATCGTAATAAA]
[+] EMBL BM637509             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ccGGAACCGATGTACAAAGAGTCGGACCACATTCACATCATCGCCATCTGCTCGGCGCTGGATGCGGGCGTGCGGGTCGAGTACATGGACCGGGGCGATGGGAACCAGGTGATTGCTCACGATTTTCCGGACGGCTTCAAGCCGAACGTCTATCTGCTGTACCGTCCCGGGCATTACGATATACTGTATCCCAACCACGGTGAGGCGTAAGC GGTGCTGTGTGTCCCGTCGGCGGCCGGAGGAGCATATTTGTAGGATG   TAATAATAATAATAATAATAATCGTTGGCAGCGCCGCAAACTTACCAACGAATGCACCCTGCTCTGTCTCTCGTAATATGATGTCTCTTTGTTTCCTGCAAAACCCCCCCTCCCGTTCAGGATTATTCAGTACTTCTCTTTGTCGATACCGA  ACACACACAACCACACATACACGGCTAGTATGCTACTCAAAATAATAAATAAAATGTACGGGAAG            ]


>consensus_8998#0 GCTCAGGCAGACCGCCGACGCGTGCGGCCTGAAGCGCCCGTAACGTTTGGTGCAAAAGTG TCCTGCCAATTGTTGGTGCGAATTTAGCTTTACTTTGAACAGGAAAGCAACTTAATCCAT TCCGTGCTGGTGATAGACGTTGGCGATTGGCAAACAAACGGAAAAGGAGACTTTTCCCCC CTCGAAACGCCCGTGTCGGCACAGCATGAGCAACTCCGAGAGCAGCAGTAGCAGCAGCGG CAGCGGCAGCAGCAGTAGCGGTAGCAAAAATGCAAAATCAGAAGAGAATCAGGACGAGCT GATTATAAAACAGCAGCGCGAAATTGAACAAGAGATTGCGCATTCCAATCCGCTAGTCAG TGAGTCGCAACCGATCGCCAGCCTCAACCAGGAGTACCTGGACGATCCGGTGTACATATC AAAGATTAAGGATCTCTCCACCAAGTACCGGGCGATACGGCGCAGCCGGCCGGACGGCAA CTGCTTCTTCCGCGCGTTCGCGTACGCGTACCTCGAGTACCTGGTGCGGAACAAGGACGA GTTTCAAAAGTTCTACGAGTATGCGTCCAAATCGAGGGAGCGGCTAACCGAGGCCGGCTT CCCGCCGTTCACGATCGAGGACTTTTACGAAACGTTCATGGAGGTGATCGGCAAGGTGAA GCCGGAGGGCGACAATACGGCCGCTGCCCTGGCCGAGCTGCACAAGCTGTTCAACGAGCA GGGCTACTCGGACTACGTGGTGGTGTATCTGCGCCTGATCACCTCGAGCCATCTGCAGGA GAAGGCCGACTTTTATCAGAACTTTATCGACGGGAACATTACGATCGTGGAGTTCTGCCA CCAGGAGGTGGAACCGATGTACAAGGAGTCGGACCACATTCACATCATCGCCATCTGCTC GGCGCTGGATGCGGGCGTGCGGGTCGAGTACATGGACCGGGGCGATGGGAACCAGGTGAT TGCTCACGATTTTCCGGACGGCTTCAAGCCGAACGTCTATCTGCTGTACCGTCCCGGGCA TTACGATATACTGTATCCCAACCACGGTGAGGCGTAAGCGGTGCTGTGTGTCCCGTCAGC GGCCGGAGGAGCATATTTGTAGGATGTAATAATAATAATAATAATAATAATCGTTGGCAG CGCCGCAAACTTACCAACGAATGCACCCTGCTCTGTCTCTCGTATAATGATGTCTCTTTG TTTCCTGCAAAACCCCCCTCCCGTTCAGGATTATTCAGTACTTCTCTTTGTCGATACCGA ACACACACACAACCACACATACACGGCTAGTATGCTACTCAAAATAAAAAATAAAATGTA CGGAAGAATCGTAATAAA



consensusID : consensus_8998#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 554
fasta sequence
                              [CCGCCCACGCGTCCGTTTACTTTGAACAGGAAAGCAACTTTATCCATTCCGTGCAGGAGATAGGCGTTCGATTGGCAAACAAACGGAAAAGGAGACTTTTCCCCCCTCGAAAGGCCCGTGTCGGCACAGCATGAGCAACTCCGAGAGCAGCAGTAGCAGCAGCGGCAGCGGCAGCAGCAGTAGCGGTAGCAAAAATGCAAAATCAGAAGAGAATCAGGACGAGCTGATTATAAAACAGCAGCGCGAAATTGAACAAGAGATTGCGCATTCCAATCCGCTAGTCAGTGAGTCGCAACCGATCGCCAGCCTCAACCAGGAGTACCTGGACGATCCGGTGTACATATCAAAGATTAAGGATCTCTCCACCAAGTACCGGGCGATACGGCGCAGCCGGCCGGACGGCAACTGCTTCTTCCGCGCGTTCGCGTACGCGTACCTCGAGTACCTGGTGCGGAACAAGGACGAGTTTCAAAAGTTCTACGAGTATGCGTCCAAATCGAGGGAGCGGCTAACTGAGGCCGGCTTCCCGCCGTTCACGATCGAGGACTTTTACG]

[+] EMBL BM641811             [CCGCCCACGCGTCCGTTTACTTTGAACAGGAAAGCAACTTTATCCATTCCGTGCAGGAGATAGGCGTTCGATTGGCAAACAAACGGAAAAGGAGACTTTTCCCCCCTCGAAAGGCCCGTGTCGGCACAGCATGAGCAACTCCGAGAGCAGCAGTAGCAGCAGCGGCAGCGGCAGCAGCAGTAGCGGTAGCAAAAATGCAAAATCAGAAGAGAATCAGGACGAGCTGATTATAAAACAGCAGCGCGAAATTGAACAAGAGATTGCGCATTCCAATCCGCTAGTCAGTGAGTCGCAACCGATCGCCAGCCTCAACCAGGAGTACCTGGACGATCCGGTGTACATATCAAAGATTAAGGATCTCTCCACCAAGTACCGGGCGATACGGCGCAGCCGGCCGGACGGCAACTGCTTCTTCCGCGCGTTCGCGTACGCGTACCTCGAGTACCTGGTGCGGAACAAGGACGAGTTTCAAAAGTTCTACGAGTATGCGTCCAAATCGAGGGAGCGGCTAACTGAGGCCGGCTTCCCGCCGTTCACGATCGAGGACTTTTACG]


>consensus_8998#1 CCGCCCACGCGTCCGTTTACTTTGAACAGGAAAGCAACTTTATCCATTCCGTGCAGGAGA TAGGCGTTCGATTGGCAAACAAACGGAAAAGGAGACTTTTCCCCCCTCGAAAGGCCCGTG TCGGCACAGCATGAGCAACTCCGAGAGCAGCAGTAGCAGCAGCGGCAGCGGCAGCAGCAG TAGCGGTAGCAAAAATGCAAAATCAGAAGAGAATCAGGACGAGCTGATTATAAAACAGCA GCGCGAAATTGAACAAGAGATTGCGCATTCCAATCCGCTAGTCAGTGAGTCGCAACCGAT CGCCAGCCTCAACCAGGAGTACCTGGACGATCCGGTGTACATATCAAAGATTAAGGATCT CTCCACCAAGTACCGGGCGATACGGCGCAGCCGGCCGGACGGCAACTGCTTCTTCCGCGC GTTCGCGTACGCGTACCTCGAGTACCTGGTGCGGAACAAGGACGAGTTTCAAAAGTTCTA CGAGTATGCGTCCAAATCGAGGGAGCGGCTAACTGAGGCCGGCTTCCCGCCGTTCACGAT CGAGGACTTTTACG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8998#0      GCTCAGGCAGACCGCCGACGCGTGCGGCCTGAAGCGCCCGTAACGTTTGGTGCAAAAGTG 60
consensus_8998#1      ------------------------------------------------------------
                                                                                  

consensus_8998#0      TCCTGCCAATTGTTGGTGCGAATTTAGCTTTACTTTGAACAGGAAAGCAACTTAATCCAT 120
consensus_8998#1      -------------CCGCCCACGCGTCCGTTTACTTTGAACAGGAAAGCAACTTTATCCAT 47
                                     *  *     *   ************************* ******

consensus_8998#0      TCCGTGCTGGTGATAGACGTTGGCGATTGGCAAACAAACGGAAAAGGAGACTTTTCCCCC 180
consensus_8998#1      TCCGTGCAGGAGATAGGCGTT--CGATTGGCAAACAAACGGAAAAGGAGACTTTTCCCCC 105
                      ******* ** ***** ****  *************************************

consensus_8998#0      CTCGAAACGCCCGTGTCGGCACAGCATGAGCAACTCCGAGAGCAGCAGTAGCAGCAGCGG 240
consensus_8998#1      CTCGAAAGGCCCGTGTCGGCACAGCATGAGCAACTCCGAGAGCAGCAGTAGCAGCAGCGG 165
                      ******* ****************************************************

consensus_8998#0      CAGCGGCAGCAGCAGTAGCGGTAGCAAAAATGCAAAATCAGAAGAGAATCAGGACGAGCT 300
consensus_8998#1      CAGCGGCAGCAGCAGTAGCGGTAGCAAAAATGCAAAATCAGAAGAGAATCAGGACGAGCT 225
                      ************************************************************

consensus_8998#0      GATTATAAAACAGCAGCGCGAAATTGAACAAGAGATTGCGCATTCCAATCCGCTAGTCAG 360
consensus_8998#1      GATTATAAAACAGCAGCGCGAAATTGAACAAGAGATTGCGCATTCCAATCCGCTAGTCAG 285
                      ************************************************************

consensus_8998#0      TGAGTCGCAACCGATCGCCAGCCTCAACCAGGAGTACCTGGACGATCCGGTGTACATATC 420
consensus_8998#1      TGAGTCGCAACCGATCGCCAGCCTCAACCAGGAGTACCTGGACGATCCGGTGTACATATC 345
                      ************************************************************

consensus_8998#0      AAAGATTAAGGATCTCTCCACCAAGTACCGGGCGATACGGCGCAGCCGGCCGGACGGCAA 480
consensus_8998#1      AAAGATTAAGGATCTCTCCACCAAGTACCGGGCGATACGGCGCAGCCGGCCGGACGGCAA 405
                      ************************************************************

consensus_8998#0      CTGCTTCTTCCGCGCGTTCGCGTACGCGTACCTCGAGTACCTGGTGCGGAACAAGGACGA 540
consensus_8998#1      CTGCTTCTTCCGCGCGTTCGCGTACGCGTACCTCGAGTACCTGGTGCGGAACAAGGACGA 465
                      ************************************************************

consensus_8998#0      GTTTCAAAAGTTCTACGAGTATGCGTCCAAATCGAGGGAGCGGCTAACCGAGGCCGGCTT 600
consensus_8998#1      GTTTCAAAAGTTCTACGAGTATGCGTCCAAATCGAGGGAGCGGCTAACTGAGGCCGGCTT 525
                      ************************************************ ***********

consensus_8998#0      CCCGCCGTTCACGATCGAGGACTTTTACGAAACGTTCATGGAGGTGATCGGCAAGGTGAA 660
consensus_8998#1      CCCGCCGTTCACGATCGAGGACTTTTACG------------------------------- 554
                      *****************************                               

consensus_8998#0      GCCGGAGGGCGACAATACGGCCGCTGCCCTGGCCGAGCTGCACAAGCTGTTCAACGAGCA 720
consensus_8998#1      ------------------------------------------------------------
                                                                                  

consensus_8998#0      GGGCTACTCGGACTACGTGGTGGTGTATCTGCGCCTGATCACCTCGAGCCATCTGCAGGA 780
consensus_8998#1      ------------------------------------------------------------
                                                                                  

consensus_8998#0      GAAGGCCGACTTTTATCAGAACTTTATCGACGGGAACATTACGATCGTGGAGTTCTGCCA 840
consensus_8998#1      ------------------------------------------------------------
                                                                                  

consensus_8998#0      CCAGGAGGTGGAACCGATGTACAAGGAGTCGGACCACATTCACATCATCGCCATCTGCTC 900
consensus_8998#1      ------------------------------------------------------------
                                                                                  

consensus_8998#0      GGCGCTGGATGCGGGCGTGCGGGTCGAGTACATGGACCGGGGCGATGGGAACCAGGTGAT 960
consensus_8998#1      ------------------------------------------------------------
                                                                                  

consensus_8998#0      TGCTCACGATTTTCCGGACGGCTTCAAGCCGAACGTCTATCTGCTGTACCGTCCCGGGCA 1020
consensus_8998#1      ------------------------------------------------------------
                                                                                  

consensus_8998#0      TTACGATATACTGTATCCCAACCACGGTGAGGCGTAAGCGGTGCTGTGTGTCCCGTCAGC 1080
consensus_8998#1      ------------------------------------------------------------
                                                                                  

consensus_8998#0      GGCCGGAGGAGCATATTTGTAGGATGTAATAATAATAATAATAATAATAATCGTTGGCAG 1140
consensus_8998#1      ------------------------------------------------------------
                                                                                  

consensus_8998#0      CGCCGCAAACTTACCAACGAATGCACCCTGCTCTGTCTCTCGTATAATGATGTCTCTTTG 1200
consensus_8998#1      ------------------------------------------------------------
                                                                                  

consensus_8998#0      TTTCCTGCAAAACCCCCCTCCCGTTCAGGATTATTCAGTACTTCTCTTTGTCGATACCGA 1260
consensus_8998#1      ------------------------------------------------------------
                                                                                  

consensus_8998#0      ACACACACACAACCACACATACACGGCTAGTATGCTACTCAAAATAAAAAATAAAATGTA 1320
consensus_8998#1      ------------------------------------------------------------
                                                                                  

consensus_8998#0      CGGAAGAATCGTAATAAA 1338
consensus_8998#1      ------------------
                                        




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)