These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9019#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1010 fasta sequence [TGCTGACCATGGCACTGCCCTACTATCTGCAAGACCCGGAAGCACCGTTCCCGCATCTGTTCGAGTCGATCGAATGGCACGCCATTAAGTGGATCGTCTCGATCGGTGCAATCTTTGCGCTCTGTACCAGCCTGCTCGGTGCAATGTTTCCGCTGCCTCGCGTCCTGTACGCCATGTCGTCGGACGGCATCATCTACAAGAAGCTACAGACGGTCCACCCGAAAACGCAAACACCTGTGCTGGCCACTTTGCTGTCCGGGCTGTTGGCGGCGATCATGGCGGCTCTGTTCAATCTGCAGCAGCTGATCGATATGATGTCGATTGGAACGTTGCTAGCCTACACGATCGTAGCGGTGAGTGTACTGGTGTTGCGCTACCAGTCGGAGGAACTGCTCGGTAGTTCGGAAGTCAGCGTGACCGNGCCGGAGGTGATTCGGCAGCTCGTCAATCGCGAGCGTCATCAAGCGCCGACGAAGCTGTCCTCGGCGGTGGTCAAGTTCAGCGTTTGCATTTTTGCCGTGTTTGTCTGCGGTGCATGCGGCATTCTGGTACCGGCCGAAGATTACATTAACGGTGACTACCCGGGCGTCATCGCAGGACTGGCGATACTCGTTGCCCTGCTTGTCGGGCTGTTCGTTGTTATTTNCCTGCAGCCGACGGACAAAATTAAGCTTACATTTAAAGTGCCGCTAGTGCCGCTGCTGCCACTGATCAGTGTGTTCTTCAACCTGTACCTCATGTTCCAGCTCGACTCCGGTACCTGGATTCGTTTCAGCGTTTGGATTGTCATCGGCTACTTCATCTACTTCAGCTACGGAATCCGCCACTCGATAGAGGGCGAGCGGTTACTCACGAATGCGGAGCTTGCCGCCTCCAAGGCGAACGGCATCGACAATACCGGGTACGACGGTGCGTCCGACATGGTGGATCAGAAGGACCCGGCAAAATTCCAAGGTGCACCGATGTACGTGATAGCNAACGAATCAACGTANGGGGTTGCGTTCGTTACT] [+] EMBL BX626224 [TGCTGACCATGGCACTGCCCTACTATCTGCAAGACCCGGAAGCACCGTTCCCGCATCTGTTCGAGTCGATCGAATGGCACGCCATTAAGTGGATCGTCTCGATCGGTGCAATCTTTGCGCTCTGTACCAGCCTGCTCGGTGCAATGTTTCCGCTGCCTCGCGTCCTGTACGCCATGTCGTCGGACGGCATCATCTACAAGAAGCTACAGACGGTCCACCCGAAAACGCAAACACCTGTGCTGGCCACTTTGCTGTCCGGGCTGTTGGCGGCGATCATGGCGGCTCTGTTCAATCTGCAGCAGCTGATCGATATGATGTCGATTGGAACGTTGCTAGCCTACACGATCGTAGCGGTGAGTGTACTGGTGTTGCGCTACCAGTCGGAGGAACTGCTCGGTAGTTCGGAAGTCAGCGTGACCGNGCCGGAGGTGATTCGGCAGCTCGTCAATCGCGAGCGTCATCAAGCGCCGACGAAGCTGTCCTCGGCGGTGGTCAAGTTCAGCGTTTGCATTTTTGCCGTGTTTGTCTGCGGTGCATGCGGCATTCTGGTACCGGCCGAAGATTACATTAACGGTGACTACCCGGGCGTCATCGCAGGACTGGCGATACTCGTTGCCCTGCTTGTCGGGCTGTTCGTTGTTATTTNCCTGCAGCCGACGGACAAAATTAAGCTTACATTTAAAGTGCCGCTAGTGCCGCTGCTGCCAC ] [+] EMBL BX620069 [ ACACGATCGTAGCGGTGAGTGTACTGGTGTTGCGCTACCAGTCGGAGGAACTGCTCGGTAGTTCGGAAGTCAGCGTGACCGTGCCGGAGGTGATTCGGCAGCTCGTCAATCGCGAGCGTCATCAAGCGCCGACGAAGCTGTCCTCGGCGGTGGTCAAGTTCAGCGTTTGCATTTTTGCCGTGTTTGTCTGCGGTGCATGCGGCATTCTGGTACCGGCCGAAGATTACATTAACGGTGACTACCCGGGCGTCATCGCAGGACTGGCGATACTCGTTGCCCTGCTTGTCGGGCTGTTCGTTGTTATTTCCCTGCAGCCGACGGACAAAATTAAGCTTACATTTAAAGTGCCGCTAGTGCCGCTGCTGCCACTGATCAGTGTGTTCTTCAACCTGTACCTCATGTTCCAGCTCGACTCCGGTACCTGGATTCGTTTCAGCGTTTGGATTGTCATCGGCTACTTCATCTACTTCAGCTACGGAATCCGCCACTCGATAGAGGGCGAGCGGTTACTCACGAATGCGGAGCTTGCCGCCTCCAAGGCGAACGGCATCGACAATACCGGGTACGACGGTGCGTCCGACATGGTGGATCAGAAGGACCCGGCAAAATTCCAAGGTGCACCGATGTACGTGATAGCNAACGAATCAACGTANGGGGTTGCGTTCGTTACT] consensusID : consensus_9019#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1007 fasta sequence [CGGCAAGATCTCGACCGGTGCGGTCGATTCGCAAACGCACTCTCGAAACGGTAGTTGCCGCGTCAAAGCTGAATCTATTCGCTCGAACCACCCCGGATCTAGCCCTTCTCCGCCGTGTGCAGCTCGTGTTGATTTCTGCGCTACCAGTCGGAGGAACTGCTCGGTAGTTCGGAAGTCAGCGTGACCGTG-CCCGAGGTGATTCGGCAGCTCGTCAATCGCGAGCGTCATCAAGCGCCGACGAAGCTGTCCTCGGCGGTGGTCAAGTTCAGCGTTTGCATTTTTGCCGTGTTTGTCTGCGGTGCATGCGGCATTCTGGTACCGGCCGAAGATTACATTAACGGTGACTACCCGGGCGTCATCGCAGGACTGGCGATACTCGTTGCCCTGCTTGTCGGGCTGTTCGTTGTTATTTCCCTGCAGCCGACGGACAAAATTAAGCTTACATTTAAAGTGCCGCTAGTGCCGCTGCTGCCACTGATCAGTGTGTTCTTCAACCTGTACCTCATGTTCCAGCTCGACTCCGGTACCTGGATTCGTTTCAGCGTTTGGATTGTCATCGGCTACTTCATCTACTTCAGCTACGGAATCCGCCACTCGATAGAG-G-GCGAGCGGTTACTCACGAATGCGGAGCTTGCCGCCTCCAAGGCGAACGGCATCGACAATACCGGGTACGACGGTGCGTCCGACATGGTGGATCAGAAGGACCAGGCAAAATTCCAAGGTGCACCGATGTACGTGATAGCAAACGAATCAACGTAGGGGTTGCGTTCGTTACTCGCAAAGTGAGGCGTCAGTATTATGGCGGCGTGAGCA-GGATTCCCGCGGGCTGCATCAATGGCGGTCCCAATTTTCATGATAAGCATTAGCTAAGTACAAACGAACGTGAGAGCAAGCAAAACAAAACAAACGACCAAGTGCGTACCCGGACCAGGCGAGCAAATCCGCACTACAAGTGATTGTGATAATTATTGCATACTAGTTGTTTAAGGATCTACCTCGAGACATTT] [+] EMBL CNS09LY8 [CGGCAAGATCTCGACCGGTGCGGTCGATTCGCAAACGCACTCTCGAAACGGTAGTTGCCGCGTCAAAGCTGAATCTATTCGCTCGAACCACCCCGGATCTAGCCCTTCTCCGCCGTGTGCAGCTCGTGTTGATTTCTGCGCTACCAGTCGGAGGAACTGCTCGGTAGTTCGGAAGTCAGCGTGACCGTG CCCGAGGTGATTCGGCAGCTCGTCAATCGCGAGCGTCATCAAGCGCCGACGAAGCTGTCCTCGGCGGTGGTCAAGTTCAGCGTTTGCATTTTTGCCGTGTTTGTCTGCGGTGCATGCGGCATTCTGGTACCGGCCGAAGATTACATTAACGGTGACTACCCGGGCGTCATCGCAGGACTGGCGATACTCGTTGCCCTGCTTGTCGGGCTGTTCGTTGTTATTTCCCTGCAGCCGACGGACAAAATTAAGCTTACATTTAAAGTGCCGCTAGTGCCGCTGCTGCCACTGATCAGTGTGTTCTTCAACCTGTACCTCATGTTCCAGCTCGACTCCGGTACCTGGATTCGTTTCAGCGTTTGGATTGTCATCGGCTACTTCATCTACTTCAGCTACGGAATCCGCCACTCGATAGAG G GCGAGCGGTTACTCACGAATGCGGAG TTGg ] [+] EMBL CNS09647 [ ATCTCGACCGGTGCGGTCGATTCGCAAACGCACTCTCGAAACGGTAGTTGCCGCGTCAAAGCTGAATCTATTCGCTCGAACCACCCCGGATCTAGCCCTTCTCCGCCGTGTGCAGCTCGTGTTGATTTCTGCGCTACCAGTCGGAGGAACTGCTCGGTAGTTCGGAAGTCAGCGTGACCGTG CCCGAGGTGATTCGGCAGCTCGTCAATCGCGAGCGTCATCAAGCGCCGACGAAGCTGTCCTCGGCGGTGGTCAAGTTCAGCGTTTGCATTTTTGCCGTGTTTGTCTGCGGTGCATGCGGCATTCTGGTACCGGCCGAAGATTACATTAACGGTGACTACCCGGGCGTCATCGCAGGACTGGCGATACTCGTTGCCCTGCTTGTCGGGCTGTTCGTTGTTATTTCCCTGCAGCCGACGGACAAAATTAAGCTTACATTTAAAGTGCCGCTAGTGCCGCTGCTGCCACTGATCAGTGTGTTCTTCAACCTGTACCTCATGTTCCAGCTCGACTCCGGTACCTGGATTCGTTTCAGCGTTTGGATTGTCATCGGCTACTTCATCTACTTCAGCTACGGAATCCGCCACTCGATAGAG G GCGAGCGGTTACTCACGAATGCGGAGCTTGCCGCCTCCAAGGCGAACGGCATCGACAATACCGGGTACGACGGTGCGTCCGACATGGTGGATCAGAAGGACCAGGCAAAATTCCAAGGTGCACCGATGTACGTGATAGCAAACGAATCAACGTAGGGGTTGCGTTCGTTACTCGCAAAGTGAGGCGTCAGTATTATGGCGGCGTGA CAGGGATTCCCGCGGGCTGCATCAATGGCGGTCCCAATTTTCATGATAAGCATTAGCTAAGTACAAACGAACGTGAGAGCAAGCAAAACAAAACAAACGACCAAGTGCGTACCCGGACCAGGCGAGCAAATCCGCACTACAAGTGATTGT ] [+] EMBL CNS09HSL [ CGACCGGTGCGGTCGATTCGCAAACGCACTCTCGAAACGGTAGTTGCCGCGTCAAAGCTGAATCTATTCGCCCGAACCACCCCGGATCTAGCCCTTCTCCGCCGTGTGCAGCTCGTGTTGATTTCTGCGCTACCAGTCGGAGGAACTGCTCGGTAGTTCGGAAGTCAGCGTGACCGTG CCCGAGGTGATTCGGCAGCTCGTCAATCGCGAGCGTCATCAAGCGCCGACGAAGCTGTCCTCGGCGGTGGTCAAGTTCAGCGTTTGCATTTTTGCCGTGTTTGTCTGCGGTGCATGCGGCATTCTGGTACCGGCCGAAGATTACATTAACGGTGACTACCCGGGCGTCATCGCAGGACTGGCGATACTCGTTGCCCTGCTTGTCGGGCTGTTCGTTGTTATTTCCCTGCAGCCGACGGACAAAATTAAGCTTACATTTAAAGTGCCGCTAGTGCCGCTGCTGCCACTGATCAGTGTGTTCTTCGACCTGTACCTCATGTTCCAGCTCGACTCCGGTACCTGGATTCGTTTCAGCGTTTGGATTGTCATCGGCTACTTCATCTACTTCAGCTACGGAATCCGCCACTCGATAGAGTGTGCGAGCGGTAACACACGAATGCGG ] [-] EMBL CNS09648 [ CTCGAACCACCCCGGATCTAGCCCTTCTCCGCCGTGTGCAGCTCGTGTTGATTTCTGCGCTACCAGTCGGAGGAACTGCTCGGTAGTTCGGAAGTCAGCGTGACCGTGCCCCGAGGTGATTCGGCAGCTCGTTAATCGCGAGCGTCATCAAGCGCCGACGAAGCTGTCCTCGGCGGTGGTCAAGTTCAGCGTTTGCATTTTTGCCGTGTTTGTCTGCGGTGCATGCGGCATTCTGGTACCGGCCGAAGATTACATTAACGGTGACTACCCGGGCGTCATCGCAGGACTGGCGATACTCGTTGCCCTGCTTGTCGGGCTGTTCGTTGTTATTTCCCTGCAGCCGACGGACAAAATTAAGCTTACATTTAAAGTGCCGCTAGTGCCGCTGCTGCCACTGATCAGTGTGTTCTTCAACCTGTACCTCATGTTCCAGCTCGACTCCGGTACCTGGATTCGTTTCAGCGTTTGGATTGTCATCGGCTACTTCATCTACTTCAGCTACGGAATCCGCCACTCGATAGAG G GCGAGCGGTTACTCACGAATGCGGAGCTTGCCGCCTCCAAGGCGAACGGCATCGACAATACCGGGTACGACGGTGCGTCCGACATGGTGGATCAGAAGGACCAGGCAAAATTCCAAGGTGCACCGATGTACGTGATAGCAAACGAATCAACGTAGGGGTTGCGTTCGTTACTCGCAAAGTGAGGCGTCAGTATTATGGCGGCGTGAGCA GGATTCCCGCGGGCTGCATCAATGGCGGTCCCAATTTTCATGATAAGCATTAGCTAAGTACAAACGAACGTGAGAGCAAGCAAAACAAAACAAACGACCAAGTGCGTACCCGGACCAGGCGAGCAAATCCGCACTACAAGTGATTGTGATAATTATTGCATACTAGTTGTTTCCGGCTCTCCCTCG ] [-] EMBL CNS09HSM [ CGTGTTTATTTCTGCGCTACCAGTCGGAGGAACTGCTCGGTAGTTCGGAAGTCAGCGTGACCGTG CCCGAGGTGATTCGGCAGCTCGTTAATCGCGAGCGTCATCAAGCGCCGACGAAGCTGTCCTCGGCGGTGGTCAAGTTCAGCGTTTGCATTTTTGCCGTGTTTTTCTGCGGTGCATGCGGCATTCTGGTACCGGCCGAAGATTACATTAACGGTGACTACCCGGGCGTCATCGCAGAACTGGCGATACTCGTTGCCCTGCTTGTCGGGCTGTTCGTTGTTATTTCCCTGCAGCCGACGGACAAAATTAAGCTTACATTTAAAGTGCCGCTAGTGCCGCTGCTGCCACTGATCAGTGTGTTCTTCGACCTGTACCTCATGTTCCAGCTCGACTCCGGTACCTGAATTCGTTTCAGCGTTTGGATTGTCATCGGCTACTTCATCTACTTCAGCTACGGAATCCGCCACTCGATAGAG G GCGAGCGGTTACTCACGAATGCGGAGCTTGCCGCCTCCAAGGCGAACGGCATCGACAATACCGGGTACGACGGTGCGTCCGACATGGTGGATCAGAAGGACCAGGCAAAATTCCAAGGTGCACCGATGTACGTGATAGCAAACGAATCAACGTAGGGGTTGCGTTCGTAACTCGCAAAGTGAGGCGTCAGTATTATGGCGGCGTGAGCA GGATTCCCGCGGGCTGCATCAATGGCGGTCCCAATTTTCATGATAAGCATTAGCTAAGTACAAACGAACGTGAGAGCAAGCAAAACAAAACAAACGACCAAGTGCGTACCCGGACCAGGCGAGCAAATCCGCACTACAAGTGATTGTGATAATTATTGCATACTAGTTGTTTAAGGATCTA ] [+] EMBL BX614251 [ GCTGTCCTCGGCGGTGGTCAAGTTCAGCGTTTGCATTTTTGCCGTGTTTGTCTGCGGTGCATGCGGCATTCTGGTACCGGCCGAAGATTACATTAACGGTGACTACCCGGGCGTCATCGCAGGACTGGCGATACTCGTTGCCCTGCTTGTCGGGCTGTTCGTTGTTATTTCCCTGCAGCCGACGGACAAAATTAAGCTTACATTTAAAGTGCCGCTAGTGCCGCTGCTGCCACTGATCAGTGTGTTCTTCAACCTGT ] [-] EMBL CNS09LY9 [ CCTGTACCTCA GGTCCAGCTCGACTCCGGTACCTGGATTCGTTTCAGCGTTTGGATTGTCATCGGCTACTTCATCTACTTCAGCTACGGAATCCGCCACTCGATAGAG G GCGAGCGGTTACTCACGAATGCGGAGCTTGCCGCCTCCAAGGCGAACGGCATCGACAATACCGGGTACGACGGTGCGTCCGACATGGTGGATCAGAAGGACCAGGCAAAATTCCAAGGTGCACCGATGTACGTGATAGCAAACGAATCAACGTAGGGGTTGCGTTCGTTACTCGCAAAGTGAGGCGTCAGTATTATGGCGGCGTGAGCA GGATTCCCGCGGGCTGCATCAATGGCGGTCCCAATTTTCATGATAAGCATTAGCTAAGTACAAACGAACGTGAGAGCAAGCAAAACAAAACAAACGACCAAGTGCGTACCCGGACCAGGCGAGCAAATCCGCACTACAAGTGATTGTGATAATTATTGCATACTAGTTGTTTAAGGATCTAAATAGAGACATTT] consensusID : consensus_9019#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 688 fasta sequence [CCGCCCACGCGTCCGCTCGACCGGTGCGGTCGATTTGCAAACGCACTCTCGAAACGGTAGTTGCCGCGTCAAAGCTGAATCTATTCGCTCGAACCACCCCGGATCTAGCCCTTCTCCGCCGTGTGCAGCTCGTGTTGATTTCTGTGCAATAACCCTCCGGAGCGTAACAATGCGAGCGGACGGTCCCTTGCGTCGGTTCTGGTCAGCGTTGACGCGGAAGAAACAGAACGAAGACGATGGGTCGGAGTCGAAGCTGGCCCGCGTCCTCACACTGCTCGATCTGACCGGGCTCGGTGTGGGCA-GTACGCTCGGTCTCGGTGTGTACGTTCTGGCCGGTTCGGTGGCACGCG-AACAGGCCGGTCCGGCCGTCGTTGTCTCGATTCCTGGGTGGCGGCAGTCGCTTCCGCCATTGCCGCCTTGTGCTATGCCGAGTTTGCTGCCCGTGTACCGAAGGCTGGCTCCGCCTACGTCTACAGTTACGTGAGCATCGGCGAGTTTACTGCCTTCACGATCGGTTGGAATCTGATTCTGGAGTACGTGATCGGCACGTCCAGCGTGGCCCGTGGCATGAGCGGCTACATCGACTCGCTGGTGGACAACAAAATAAGCAAAGCGATGCGCGAAGCTATGCCGATCGATGTCGACTTCCTGTCGGACTATCCGGACTTTTTCTCGTTCGTCGTGGTGC] [+] EMBL BM618871 [CCGCCCACGCGTCCGCTCGACCGGTGCGGTCGATTTGCAAACGCACTCTCGAAACGGTAGTTGCCGCGTCAAAGCTGAATCTATTCGCTCGAACCACCCCGGATCTAGCCCTTCTCCGCCGTGTGCAGCTCGTGTTGATTTCTGTGCAATAACCCTCCGGAGCGTAACAATGCGAGCGGACGGTCCCTTGCGTCGGTTCTGGTCAGCGTTGACGCGGAAGAAACAGAACGAAGACGATGGGTCGGAGTCGAAGCTGGCCCGCGTCCTCACACTGCTCGATCTGACCGGGCTCGGTGTGGGCA GTACGCTCGGTCTCGGTGTGTACGTTCTGGCCGGTTCGGTGGCACGCG AACAGGCCGGTCCGGCCGTCGTTGTCTCGATTCCTGGGTGGCGGCAGTCGCTTCCGCCATTGCCGCCTTGTGCTATGCCGAGTTTGCTGCCCGTGTACCGAAGGCTGGCTCCGCCTACGTCTACAGTTACGTGAGCATCGGCGAGTTTACTGCCTTCACGATCGGTTGGAATCTGATTCTGGAGTACGTGATCGGCACGTCCAGCGTGGCCCGTGGCATGAGCGGCTACATCGACTCGCTGGTGGACAACAAAATAAGCAAAGCGATGCGCGAAGCTATGCCGATCGATGTCGACTTCCTGTCGGACTATCCGGACTTTTTCTCGTTCGTCGTGGTGC] [+] EMBL BM629303 [ ccgCGGTGCGGTCGATTTGCAAACGCACTCTCGAAACGGTAGTTGCCGCGTCAAAGCTGAATCTATTCGCTCGAACCACCCCGGATCTAGCCCTTCTCCGCCGTGTGCAGCTCGTGTTGATTTCTGTGCAATAACCCTCCGGAGCGTAACAATGCGAGCGGACGGTCCCTTGCGTCGGTTCTGGTCAGCGTTGACGCGGAAGAAACAGAACGAAGACGATGGGTCGGAGTCGAAGCTGGCCCGCGTCCTCACACTGCTCGATCTGACCGGGCTCGGTGTGGGCATGTACGCTCGGTCTCGGTGTGTACGTTCTGGCCGGTTCGGTGGCACGCGTAACAGGCCGGTCCGGCCGTCATTGTCTCG TTCCT GGTGGCGGCCGTCGCTTCCGCCATTGCCGCCTTGTGCTATGTCGAGTTTGCTGCCCGTGTACCGAAGGCTGGCTCCGCCTACGT ] consensusID : consensus_9019#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 511 fasta sequence [CCCAGGTTTAGTTGCGCTACAGTCGGAGGAACTGCTCGGTAGTTCGGAAGTCAGCGTGACCGTGCCGGAGGTGATTCGGCAGCTCGTCAATCGCGAGCGTCATCAAGCGCCGACGAAGCTGTCCTCGGCGGTGGTCAAGTTCAGCGTTTGCATTTTTGCCGTGTTTGTCTGCGGTGCATGCGGCATTCTGGGTACCGGCCGAAGATTACATTAACGGTGACTACCCGGGCGTCATCGCAGGACTGGCGATACTCGTTGCCCTGCTTGTCGGGCTGTTCGTTGTTATTTCCCTGCAGCCGACGGACAAAATTAAGCTTACATTTAAAGTGCCGCTAGTGCCGCTGCTGCCACTGATCAGTGTGTTCTTCAACCTGTACCTCATGTTCCAGCTCGACTCCGGTACCTGGATTCGTTTCAGCGTTTGGATTGTCATCGGCTACTTCATCTACTTCAGCTACGGAATCCGCACTCGATAGAGGGCGAGCGGTTACTCACGAATGCGGAGCTTGCC] [+] EMBL AL694285 [CCCAGGTTTAGTTGCGCTACAGTCGGAGGAACTGCTCGGTAGTTCGGAAGTCAGCGTGACCGTGCCGGAGGTGATTCGGCAGCTCGTCAATCGCGAGCGTCATCAAGCGCCGACGAAGCTGTCCTCGGCGGTGGTCAAGTTCAGCGTTTGCATTTTTGCCGTGTTTGTCTGCGGTGCATGCGGCATTCTGGGTACCGGCCGAAGATTACATTAACGGTGACTACCCGGGCGTCATCGCAGGACTGGCGATACTCGTTGCCCTGCTTGTCGGGCTGTTCGTTGTTATTTCCCTGCAGCCGACGGACAAAATTAAGCTTACATTTAAAGTGCCGCTAGTGCCGCTGCTGCCACTGATCAGTGTGTTCTTCAACCTGTACCTCATGTTCCAGCTCGACTCCGGTACCTGGATTCGTTTCAGCGTTTGGATTGTCATCGGCTACTTCATCTACTTCAGCTACGGAATCCGCACTCGATAGAGGGCGAGCGGTTACTCACGAATGCGGAGCTTGCC] consensusID : consensus_9019#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 408 fasta sequence [CCGCCCACGCGTCCGGCAAACACCTGTGCTGGCCACTTTGCTGTCCGGGCTGTTGGCGGCGATCATGGCGGCTCTGTTCAATCTGCAGCAGCTGATCGATATGATGTCGATTGGAACGTTGCTAGCCTACACGATCGTAGCGGTGAGTGTACTGGTGTTGCGCTACCAGTCGGAGGAACTGCTCGGTAGTTCGGAAGTCAGCGTGACCGTGCCGGAGGTGATTCGGCAGCTCGTCAATCGCGAGCGTCATCAAGCGCCGACGAAGCTGTCCTCGGCGGTGGTCAAGTTCAGCGTTTGCATTTTTGCCGTGTTTGTCTGCGGTGCATGCGGCATTCTGGTACCGGCCGAAGATTACATTAACGGTGACTACCCGGGCGTCATCGCAGGACTGGCGATACTCGTTGCCCT] [+] EMBL BM598498 [CCGCCCACGCGTCCGGCAAACACCTGTGCTGGCCACTTTGCTGTCCGGGCTGTTGGCGGCGATCATGGCGGCTCTGTTCAATCTGCAGCAGCTGATCGATATGATGTCGATTGGAACGTTGCTAGCCTACACGATCGTAGCGGTGAGTGTACTGGTGTTGCGCTACCAGTCGGAGGAACTGCTCGGTAGTTCGGAAGTCAGCGTGACCGTGCCGGAGGTGATTCGGCAGCTCGTCAATCGCGAGCGTCATCAAGCGCCGACGAAGCTGTCCTCGGCGGTGGTCAAGTTCAGCGTTTGCATTTTTGCCGTGTTTGTCTGCGGTGCATGCGGCATTCTGGTACCGGCCGAAGATTACATTAACGGTGACTACCCGGGCGTCATCGCAGGACTGGCGATACTCGTTGCCCT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9019#0 TGCTGACCATGGCACTGCCCTACTATCTGCAAGACCCGGAAGCACCGTTCCCGCATCTGT 60 consensus_9019#4 ------------------------------------------------------------ consensus_9019#1 ------------------------------------------------------------ consensus_9019#3 ------------------------------------------------------------ consensus_9019#2 ------------------------------------------------------------ consensus_9019#0 TCGAGTCGATCGAATGGCACGCCATTAAGTGGATCGTCTCGATCGGTGCAATCTTTGCGC 120 consensus_9019#4 ------------------------------------------------------------ consensus_9019#1 ------------------------------------------------------------ consensus_9019#3 ------------------------------------------------------------ consensus_9019#2 ------------------------------------------------------------ consensus_9019#0 TCTGTACCAGCCTGCTCGGTGCAATGTTTCCGCTGCCTCGCGTCCTGTACGCCATGTCGT 180 consensus_9019#4 ------------------------------------------------------------ consensus_9019#1 ------------------------------------------------------------ consensus_9019#3 ------------------------------------------------------------ consensus_9019#2 ------------------------------------------------------------ consensus_9019#0 CGGACGGCATCATCTACAAGAAGCTACAGACGGTCCACCCGAAAACGCAAACACCTGTGC 240 consensus_9019#4 ------------------------------CCGCCCACGCGTCCG-GCAAACACCTGTGC 29 consensus_9019#1 ---------------------------------------------CGGCAAGATCTCGAC 15 consensus_9019#3 ------------------------------------------------------------ consensus_9019#2 ---------------------------------------CCGCCCACGCGTCCGCTCGAC 21 consensus_9019#0 TGGCCACTTTGCTGTCCGGGCTGTTGGCGGCGATCATGGCGGCTCTGTTCAATCTGCAGC 300 consensus_9019#4 TGGCCACTTTGCTGTCCGGGCTGTTGGCGGCGATCATGGCGGCTCTGTTCAATCTGCAGC 89 consensus_9019#1 CGGTGCGGTCGATTCGCAAACGCACTCTCGAAACGGTAGTTGCCGCGTCAAAGCTGAATC 75 consensus_9019#3 ------------------------------------------------------------ consensus_9019#2 CGGTGCGGTCGATTTGCAAACGCACTCTCGAAACGGTAGTTGCCGCGTCAAAGCTGAATC 81 consensus_9019#0 AGCTGATCGATATGATGTCGATTGGAACGTTGCTAGCCTACACGATCGTAGCGGTGAGTG 360 consensus_9019#4 AGCTGATCGATATGATGTCGATTGGAACGTTGCTAGCCTACACGATCGTAGCGGTGAGTG 149 consensus_9019#1 TATTCGCTCGAACCACCCCGGATCTAGCCCTTCTCCGCCGTGTGCAGCTCGTGTTGATTT 135 consensus_9019#3 -----------------------------------------------CCCAGGTTTAGTT 13 consensus_9019#2 TATTCGCTCGAACCACCCCGGATCTAGCCCTTCTCCGCCGTGTGCAGCTCGTGTTGATTT 141 * * * * consensus_9019#0 TACTGGTGTTGCGCTACCAGTCGGAGGAACTGCTCGGTAGTTCGGAAGTCAGCGTGACCG 420 consensus_9019#4 TACTGGTGTTGCGCTACCAGTCGGAGGAACTGCTCGGTAGTTCGGAAGTCAGCGTGACCG 209 consensus_9019#1 C--------TGCGCTACCAGTCGGAGGAACTGCTCGGTAGTTCGGAAGTCAGCGTGACCG 187 consensus_9019#3 ----------GCGCTAC-AGTCGGAGGAACTGCTCGGTAGTTCGGAAGTCAGCGTGACCG 62 consensus_9019#2 C--------TGTGCAATAACCCTCCGGA---GCGTAACAATGCG--AGCGGACGGTCCCT 188 * ** * * * *** ** * * ** ** ** ** consensus_9019#0 NGCCGGAGGTGATTCGGCAGCTCGTCAATCGCGAGCGTCATCAAGCGCCGACGAAGCTGT 480 consensus_9019#4 TGCCGGAGGTGATTCGGCAGCTCGTCAATCGCGAGCGTCATCAAGCGCCGACGAAGCTGT 269 consensus_9019#1 TGCCCGAGGTGATTCGGCAGCTCGTCAATCGCGAGCGTCATCAAGCGCCGACGAAGCTGT 247 consensus_9019#3 TGCCGGAGGTGATTCGGCAGCTCGTCAATCGCGAGCGTCATCAAGCGCCGACGAAGCTGT 122 consensus_9019#2 TGC----GTCGGTTCTGGTCAGCGTTGA-CGCGGAAGAAACAGAACGAAGACGATG--GG 241 ** * * *** * *** * **** * * * ** ***** * * consensus_9019#0 CCTCGGCGGTGGTCAAGTTCAGCGTTTGCATT-TTTGCCGTGTTTGTCTGCGGTGCATGC 539 consensus_9019#4 CCTCGGCGGTGGTCAAGTTCAGCGTTTGCATT-TTTGCCGTGTTTGTCTGCGGTGCATGC 328 consensus_9019#1 CCTCGGCGGTGGTCAAGTTCAGCGTTTGCATT-TTTGCCGTGTTTGTCTGCGGTGCATGC 306 consensus_9019#3 CCTCGGCGGTGGTCAAGTTCAGCGTTTGCATT-TTTGCCGTGTTTGTCTGCGGTGCATGC 181 consensus_9019#2 TCGGAGTCGAAGCTGGCCCGCGTCCTCACACTGCTCGATCTGACCGGGCTCGGTGTGGGC 301 * * * * * * ** * * * ** * ***** ** consensus_9019#0 GGCATTCTGG-TACCGGCCGAAGATTACATTAACGGTGACTACCCGGGCGTCATCGCAGG 598 consensus_9019#4 GGCATTCTGG-TACCGGCCGAAGATTACATTAACGGTGACTACCCGGGCGTCATCGCAGG 387 consensus_9019#1 GGCATTCTGG-TACCGGCCGAAGATTACATTAACGGTGACTACCCGGGCGTCATCGCAGG 365 consensus_9019#3 GGCATTCTGGGTACCGGCCGAAGATTACATTAACGGTGACTACCCGGGCGTCATCGCAGG 241 consensus_9019#2 AGTACGCTCGGTCTCGGT----GTGTACGTTC-TGGCCGGTTCGGTGGCACGCGAACAGG 356 * * ** * * *** * *** ** ** * * *** **** consensus_9019#0 ACTGGC-GATACTCGTTGCCCTGCTTGTCGGGCTGTTCGTTGTTATTTNC-CTGCAGCCG 656 consensus_9019#4 ACTGGC-GATACTCGTTGCCCT-------------------------------------- 408 consensus_9019#1 ACTGGC-GATACTCGTTGCCCTGCTTGTCGGGCTGTTCGTTGTTATTTCC-CTGCAGCCG 423 consensus_9019#3 ACTGGC-GATACTCGTTGCCCTGCTTGTCGGGCTGTTCGTTGTTATTTCC-CTGCAGCCG 299 consensus_9019#2 CCGGTCCGGCCGTCGTTGTCTCGATTCCTGGG-TGGCGGCAGTCGCTTCCGCCATTGCCG 415 * * * * ****** * consensus_9019#0 AC--GGACAAAATTAAGCTTACATTTAAAGTGCCG----CTAGTGCCGCTGCTGCCACTG 710 consensus_9019#4 ------------------------------------------------------------ consensus_9019#1 AC--GGACAAAATTAAGCTTACATTTAAAGTGCCG----CTAGTGCCGCTGCTGCCACTG 477 consensus_9019#3 AC--GGACAAAATTAAGCTTACATTTAAAGTGCCG----CTAGTGCCGCTGCTGCCACTG 353 consensus_9019#2 CCTTGTGCTATGCCGAGTTTGCTGCCCGTGTACCGAAGGCTGGCTCCGCCTACGTCTACA 475 consensus_9019#0 ATCAGTGTGTTCTTCAACCTGTACCTCATGTTC-----CAGCTCGACTCCGGTACCTGGA 765 consensus_9019#4 ------------------------------------------------------------ consensus_9019#1 ATCAGTGTGTTCTTCAACCTGTACCTCATGTTC-----CAGCTCGACTCCGGTACCTGGA 532 consensus_9019#3 ATCAGTGTGTTCTTCAACCTGTACCTCATGTTC-----CAGCTCGACTCCGGTACCTGGA 408 consensus_9019#2 GTTA-CGTGAGCATCGGCGAGTTTACTGCCTTCACGATCGGTTGGAATCTGATTCTGGAG 534 consensus_9019#0 TTCGTT-TCAGCGTTTGGATTGTCATCGGCTACTTCATCTACTTCAGCTACGGAATCCGC 824 consensus_9019#4 ------------------------------------------------------------ consensus_9019#1 TTCGTT-TCAGCGTTTGGATTGTCATCGGCTACTTCATCTACTTCAGCTACGGAATCCGC 591 consensus_9019#3 TTCGTT-TCAGCGTTTGGATTGTCATCGGCTACTTCATCTACTTCAGCTACGGAATCCGC 467 consensus_9019#2 TACGTGATCGGCACGTCCAGCGTGGCCCGTGGCATGAGCGGCTACATCGACTCGCTGGTG 594 consensus_9019#0 CACTCGATAGAGGGCGAGCGGTTACTCACGA--ATGCGGAGCT-TGCCGCCTCCAAGGCG 881 consensus_9019#4 ------------------------------------------------------------ consensus_9019#1 CACTCGATAGAGGGCGAGCGGTTACTCACGA--ATGCGGAGCT-TGCCGCCTCCAAGGCG 648 consensus_9019#3 -ACTCGATAGAGGGCGAGCGGTTACTCACGA--ATGCGGAGCT-TGCC------------ 511 consensus_9019#2 GACAACAAAATAAGCAAAGCGATGCGCGAAGCTATGCCGATCGATGTCGACTTCCTGTCG 654 consensus_9019#0 AACGGCATCGACAATACCGGGTACGACGGTGCGTCCGACATGGTGGATCAGAAGGACCCG 941 consensus_9019#4 ------------------------------------------------------------ consensus_9019#1 AACGGCATCGACAATACCGGGTACGACGGTGCGTCCGACATGGTGGATCAGAAGGACCAG 708 consensus_9019#3 ------------------------------------------------------------ consensus_9019#2 GACTATCCGGACTTTTTCTCGTTCGTCGTGGTGC-------------------------- 688 consensus_9019#0 GCAAAATTCCAAGGTGCACCGATGTACGTGATAGCNAACGAATCAACGTANGGGGTTGCG 1001 consensus_9019#4 ------------------------------------------------------------ consensus_9019#1 GCAAAATTCCAAGGTGCACCGATGTACGTGATAGCAAACGAATCAACGTAGGGGTTGCGT 768 consensus_9019#3 ------------------------------------------------------------ consensus_9019#2 ------------------------------------------------------------ consensus_9019#0 TTCGTTACT--------------------------------------------------- 1010 consensus_9019#4 ------------------------------------------------------------ consensus_9019#1 TCGTTACTCGCAAAGTGAGGCGTCAGTATTATGGCGGCGTGAGCAGGATTCCCGCGGGCT 828 consensus_9019#3 ------------------------------------------------------------ consensus_9019#2 ------------------------------------------------------------ consensus_9019#0 ------------------------------------------------------------ consensus_9019#4 ------------------------------------------------------------ consensus_9019#1 GCATCAATGGCGGTCCCAATTTTCATGATAAGCATTAGCTAAGTACAAACGAACGTGAGA 888 consensus_9019#3 ------------------------------------------------------------ consensus_9019#2 ------------------------------------------------------------ consensus_9019#0 ------------------------------------------------------------ consensus_9019#4 ------------------------------------------------------------ consensus_9019#1 GCAAGCAAAACAAAACAAACGACCAAGTGCGTACCCGGACCAGGCGAGCAAATCCGCACT 948 consensus_9019#3 ------------------------------------------------------------ consensus_9019#2 ------------------------------------------------------------ consensus_9019#0 ----------------------------------------------------------- consensus_9019#4 ----------------------------------------------------------- consensus_9019#1 ACAAGTGATTGTGATAATTATTGCATACTAGTTGTTTAAGGATCTACCTCGAGACATTT 1007 consensus_9019#3 ----------------------------------------------------------- consensus_9019#2 ----------------------------------------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||