cluster # 9025

These datas are free for academic use only, please contact me for any other use.

Anopheles gambiae
cluster # 9025 cluster # 9025 Sequences # 13 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9025#0 length = 1045 sequences # 9

consensus_9025#1 length = 951 sequences # 3
consensus_9025#2 length = 690 sequences # 1

consensusID : consensus_9025#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 1045
fasta sequence

                              [GCCAAGAATCGGCACGA-GGGGAGAATCGCACTCCTCACTAGTCGGCTGTTCTGGGACGCGGAAAAGTGGAATTGATTTGA-AATTATTGTGAAATTGCACCAAAAACCACCATGCCGCAATCGGATCTGTTCGGGCTGGAGATGCTGTGGAAGCTGGAGAGCGCCAACTTGGCGGATAAGGCCGACGCGATGATGCTGTTTGTGCACTGGTTCCTAGTTCGTAACGGATTCCGTAACGTTGGCGTTGGGGACGATAAAACGCTCAACAACGCCGTCGACCAGAGCGAGTTGCTGCCGGAAGGATGGAACGGTAACAACAAATCGTACGCGCTGCGCTACATCATGAACAACGAGCTGTACATCCTGCATGGAACACTCTCGAACGATACGATGATTGTTAATTTGCTGCAAGCGCAGTCACTGCAGGTGTCGAATGCGGCCTTCAATCTGGACAAAACGATCACCTCGTTCAACGACAGCAACTTGACGAACGTTGTGGTCAGCATCGATGATCAGATCACCCGGCTGCAGACGGAGCTGATTAAACCGCTGTGCGATGGTGGATCGAAAAGCTCCAGCACGCAGACGCTAATTTCTTCGTCGCCTAGTCCTGCCCAAGTAAATGTTGTGCCAGCGGGCGGTCCCAGGCGTATTCAGGTGCTGCGTCCCAGCGGACTGCTGCTGCCATTCGGTGGTGGTGGTGTAGGTCGGGGCGATCTCAACCCGCTGGGAGGTGTTGTTGGCGGCGGTGGCGGCGGCGGTATGCTAATGGACCCAATGAACATGGGGCCCGGCAGAGTGGATCCATTTCTGCCCGGAGCGCGCATCGATCCGATGGGCCCGTTTCCTCCCCGCGTGCAACGCCCCAACCCGAATCCGGACCATCTTCCCCCACCCGGGTACGACGATATGTTTATGTAAGGGGACGAAGCGTTTGCCTATATTTCGTTTCCATTATTCCTTTTAAGTTTCGGTTACACACACACTGTGTGGAGTTTGTTAATCCTTAATTCGAATATAAAATAAAAATACGTTTCAACGTACCT]

[+] EMBL BX469802             [GCCAAGAATCGGCACGATGGGGAGAATCGCACTCCTCACTAGTCGGCTGTTCTGGGACGCGGAAAAGTGGAATTGATTTGA AATTATTGTGAAATTGCACCAAAAACCACCATGCCGCAATCGGATCTGTTCGGGCTGGAGATGCTGTGGAAGCTGGAGAGCGCCAACTTGGCGGATAAGGCCGACGCGATGATGCTGTTTGTGCACTGGTTCCTAGTTCGTAACGGATTCCGTAACGTTGGCGTTGGGGACGATAAAACGCTCAACAACGCCGTCGACCAGAGCGAGTTGCTGCCGGAAGGATGGAACGGTAACAACAAATCGTACGCGCTGCGCTACATCATGAACAACGAGCTGTACATCCTGCATGGAACACTCTCGAACGATACGATGATTGTTAATTTGCTGCAAGCGCAGTCACTGCAGGTGTCGAATGCGGCCTTCAATCTGGACAAAACGATCACCTCGTTCAACGACAGCAACTTGACGAACGTTGTGGTCAGCATCGATGATCAGATCACCCGGCTGCAGACGGAGCTGATTAAACCGCTGTGCGATGGTGGATCGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL AL692852             [       agatcccCGA GGTTATAATCGCACTCCTCACTAGTCGGCTGTTCTGGGACGCGGAAAAGTGGAATTGATTTGA AATTATTGTGAAATTGCACCAAAAACCACCATGCCGCAATCGGATCTGTTCGGGCTGGAGATGCTGTGGAAGCTGGAGAGCGCCAACTTGGCGGATAAGGCCGACGCGATGATGCTGTTTGTGCACTGGTTCCTAGTTCGTAACGGATTCCGTAACGTTGGCGTTGGGGACGATAAAACGCTCAACAACGCCGTCGACCAGAGCGAGTTGCTGCCGGAAGGATGGAACGGTAACAACAAATCGTACGCGCTGCGCTACATCATGAACAACGAGCTGTACATCCTGCATGGAACACTCTCGAACGATACGATGATTGTTAATTTGCTGCAAGCGCAGTCACTGCAGGTGTCGAATGCGG CTTCAATCTGGACAAAACGATCACCTCGTTCAACGACAGCAACTTGACGAACGTTGTGGTCAGCATCGATGATCAGATCA CCGGCTGCAGACGGAGCTGATTAAACCGCTGTGCGATGGTGGATCGAAAAGCTCCAGCACGCAGACGCTAATTTCTTCGTCG CTAGTCCTG CCAAG                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL AL932387             [             gagg ttaGAGAANCGCACTCCTNACTA TCGGNTGTTCTGTGACGCGGGAAAGTGGAATTGATTTGACAATAATTGTGAAATTGCGCCNAAAACCACCATGCCGCAATCGGATCTGTTCGGGCTGGAGATGCTGTGGAAGCTGGAGAGCGCCAACTTGGCGGATAAGGCCGACGCGATGATGCTGTTTGTGCACTGGTTCCTAGTTCGTAACGGATTCCGTAACGTTGGCGTTGGGGACGATAAAACGCTCAACAACGCCGTCGACCAGAGCGAGTTGCTGCCGGAAGGATGGAACGGTAACAACAAATCGTACGCGCTGCGCTACATCATGAACAACGAGCTGTACATCCTGCATGGAACACTCTCGAACGATACGATGATTGTTAATTTGCTGCAAGCGCAGTCACTGCAGGTGTCGAATGCGGTCTTCAATCTGGACAAAACGATCACCTCGTTCAACGACAGCAACTTGACGAACGTTGTGGTCAGCATCGATGATCAGATCACCCGGCTGCAGACGGAGCTGATTAAACCGCTGTGCGATGGTGGATCGAAAAGCTCCAGCACGCAGACGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CNS08MTC             [                           CGCACTCCTCACTAGTCGGCTGTTCTGGGACGCGGAAAAGTGGAATTGATTTGA AATTATTGTGAAATTGCACCAAAAACCACCATGCCGCAATCGGATCTGTTCGGGCTGGAGATGCTGTGGAAGCTGGAGAGCGCCAACTTGGCGGATAAGGCCGACGCGATGATGCTGTTTGTGCACTGGTTCCTAGTTCGTAACGGATTCCGTAACGTTGGCGTTGGGGACGATAAAACGCTCAACAACGCCGTCGACCAGAGCGAGTTGCTGCCGGAAGGATGGAACGGTAACAACAAATCGTACGCGCTGCGCTACATCATGAACAACGAGCTGTACATCCTGCATGGAACACTCTCGAACGATACGATGATTGTAAATTTGCTGCAAGCGCAGTCACTGCAGGTGTCGAATGCGGCCTTCAATCTGGACAAAACGATCACCTCGTTCAACGACAGCAACTTGACGAACGTTGTGGTCAGCATCGATGATCAGATCACCCGGCTGCAGACGGAGCTGATTAAACCGCTGTGCGATGGTGGATCGAAAAGCTCCAGCACGCAGACGCTAATTTCTTCGTCGCCTAGTCCTGCCCAAGTAAATGTTGTGCCAGCGGGCGGTCCCAGGCGTATTCAGGTGCTGCGTCCCAGCGGACTGCTGCTGCCATTCGGTGGTGGTGGTGTAGGTCGGGGCGATCTCAACCCGCTGGGAGGTGTTGTTGGCGGCGGTGGCGGCGGCGGTATGCTAATGGACCCAATGAACATGGGGCCCGGCAGAGTGGATCCATTTCTGCCCGGAGCGCGCATCGATCCGATGGGCCCGTTTCCTCCCCGCGTGCAAC CCCCAACCCGAATCCGGACCATCTTCCCCCACCCGGGTACGACGATATGTTTATGTAAGGGGACGAAGCGTTTGCCTATATTTCGTTTCCATTATTCCTTTTAAGTTTCGGTTACACACACACTG                                                          ]
[+] EMBL BX626480             [                             CACTCCTCACTAGTCGGCTGTTCTGGGACGCGGAAAAGTGGAATTGATTTGA AATTATTGTGAAATTGCACCAAAAACCACCATGCCGCAATCGGATCTGTTCGGGCTGGAGATGCTGTGGAAGCTGGAGAGCGCCAACTTGGCGGATAAGGCCGACGCGATGATGCTGTTTGTGCACTGGTTCCTAGTTCGTAACGGATTCCGTAACGTTGGCGTTGGGGACGATAAAACGCTCAACAACGCCGTCGACCAGAGCGAGTTGCTGCCGGAAGGATGGAACGGTAACAACAAATCGTACGCGCTGCGCTACATCATGAACAACGAGCTGTACATCCTGCATGGAACACTCTCGAACGATACGATGATTGTTAATTTGCTGCAAGCGCAGTCACTGCAGGTGTCGAATGCGGTCTTCAATCTGGACAAAACGATCACCTCGTTCAACGACAGCAACTTGACGAACGTTGTGGTCAGCATCGATGATCAGATCACCCGGCTGCAGACGGAGCTGATTAAACCGCTGTGCGATGGTGGATCGAAAAGCTCCAGCACGCAGACGCTAATTTCTTCGTCGCCTAGTCCTGCCCNAGTAAATGTTGTGCCAGCGGGCGGTCCCAGGCGTATTCAGGGGCTGCGTNCCAGCGGACTGCTGCTGCCATT                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CNS08MTD             [                                                                 AGTGGAATTGATTTGA AATTATTGTGAAATTGCACCAAAAACCACCATGCCGCAATCGGATCTGTTCGGGCTGGAGATGCTGTGGAAGCTGGAGAGCGCCAACTTGGCGGATAAGGCCGACGCGATGATGCTGTTTGTGAACTGGTTCCTAGTTCGTAACGGATTCCGTAACGTTGGCGTTGGGGACGATAAAACGCTCAACAACGCCGTCGACCAGAGCGAGTTGCTGCCGGAAGGATGGAACGGTAACAACAAATCGTA ACGCTGCGCTACATCATGAACAACGAGCTGTACATCCTGCATGGAAAACTCTCGAACGATACGATGATTGTTAATTTGCTGCAAGCGCAGTAACTGCAGGTGTCGAATGCGGCCTTCAATCTGGACAAAACGATCACCTCGTTCAACGACAGCAACTTGACGAACGTTGTGGTCAGCATCGATGATCAGATCACCCGGCTGCAGACGGAGCTGATTAAACCGCTGTGCGATGGTGGATCGAAAAGCTCCAGCACGCAGACGCTAATTTCTTCGTCGCCTAGTCCTGCCCAAGTAAATGTTGTGCCAGCGGGCGGTCCCAGGCGTATTCAGGTGCTGCGTCCCAGCGGACTGCTGCTGCCATTCGGTGGTGGTGGTGTAGGTCGGGGCGATCTCAACCCGCTGGGAGGTGTTGTTGGCGGCGGTGGCGGCGGCGGTATGCTAATGGACCCAATGAACATGGGGCCCGGCAGAGTGGATCCATTTCTGCCCGGAGCGCGCATCGATCCGATGGGCCCGTTTCCTCCCCGCGTGCAACGCCCCAACCCGAATCCGGACCATCTTCCCCCACCCGGGTACGACGATATGTTTATGTAAGGGGACGAAGCGTTTGCCTATATTTCGTTTCCATTATTCCTTTTAAGTTTC GTTACACACACACTGTGTGGAGTTTGTTAA                                           ]
[-] EMBL CNS092KU             [                                                                                                                                     GGGCTGGAGATGCTGTGGAAGCTGGAGAGCGCCAACTTGGCGGATAAGGCCGACGCGATGATGCTGTTTGTGAACTGGTTCCTAGTTCGTAACGGATTCCGTAAGGTTGGCGTTGGGGACGATAAAACGTTCAAAAACGCCGTCGACCAGAGCAAGTGGCTGCCGGAAGGATGGAACGGTAACAACAAATCGTAACCGCTGCGCTACATCATGAACAACGAGCTGTACATCCTGCATGGGAAATTCTCGAACGATACGATGATTGTTTATTTGCTGAAAGGGGAGTAACTGCAGTTGTCGAATGCGGCCTTCAATCTGGACAAAACGATCACCTCGTTCAACAACAGCAACTTAACGAACGTTGTGGTCAGCATCGATGATCAGATCACCCCGCTGCAGACGGAGCTGATTAAACCGCTGTGCGATGGTGGATCGAAAAGCTCCAGAACGCAGACGCTAATTTCTTCGTCGCCTAGTCCTGCCCAAGTAAATGTTGTGCCAGCGGGCGGTCCCAGGCGTATTCAGGTGCTGCGTCCCAGCGAACTGCTGCTGCCATTCGGTGGTGGTGGTGTAGGTCGGGGCGATCTCAACCCGCTGGGAGGTGTTGTTGGCGGCGGTGGCGGCGGCGGTATGCTAATGGACCCAATGAACATGGGGCCCGGCAGAGTGGATCCATTTCTGCCCGGAGCGCGCATCGATCCGATGGGCCCGTTTCCTCCCCGCGTGCAACGCCCCAACCCGAATCCGGACCATCTTCCCCCACCCGGGTACGACGATATGTTTATGTAAGGGGACGAAGCGTTTGCCTATATTTCGTTTCCATTATTCCTTTTAAGTTTCGGTTACACACACACTGTGTGGAGTTTGTTAATCCTTAATTCGAATATAAAATAA                    ]
[+] EMBL BM578190             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ccgCGCAGACGCTAATTTCTTCGTCGCCTAGTCCTGCCCAAGTAAATGTTGTGCCAGCGGGCGGTCCCAGGCGTATTCAGGTGCTGCGTCCCAGCGGACTGCTGCTGCCATTCGGTGGTGGTGGTGTAGGTCGGGGCGATCTCAACCCGCTGGGAGGTGTTGTTGGCGGCGGTGGCGGCGGCGGTATGCTAATGGACCCAATGAACATGGGGCCCGGCAGAGTGGATCCATTTCTGCCCGGAGCGCGCATCGATCCGATGGGCCCGTTTCCTCCCCGCGTGCAACGCCCCAACCCGAATCCGGACCATCTTCCCCCACCCGGGTACGACGATATGTTTATGTAAGGGGACGAAGCGTTTGCCTATATTTCGTTTCCATTATTCCTTTTAAGTTTCGGTTACACACACACTGTGTGGAGTTTGTTAATCCTTAATTCGAATATAAAATAAAAATACGTTTCAACGTACCT]
[-] EMBL CNS09BK6             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       CCAAGTAAATGTTGTGCCAGCGGGCGGTCCCAGGCGTATTCAGGTGCTGCGTCCCAGCGGACTGCTGCTGCCATTCGGTGGTGGTGGTGTAGGTCGGGGCGATCTCAACCCGCTGGGAGGTGTTGTTGGCGGCGGTGGCGGCGGCGGTATGCTAATGGACCCAATGAACATGGGGCCCGGCAGAGTGGATCCATTTCTGCCCGGAGCGCGCATCGATCCGATGGGCCCGTTTCCTCCCCGCGTGCAACGCCCCAACCCGAATCCGGACCATCTTCCCCCACCCGGGTACGACGATATGTTTATGTAAGGGGACGAAGCGTTTGCCTATATTTCGTTTCCATTATTCCTTTTAAGTTTCGG TACACACACACTGTGTGGAGTTTGTTAATCCTTAATTCGAATATA                          ]




>consensus_9025#0
GCCAAGAATCGGCACGAGGGGAGAATCGCACTCCTCACTAGTCGGCTGTTCTGGGACGCG
GAAAAGTGGAATTGATTTGAAATTATTGTGAAATTGCACCAAAAACCACCATGCCGCAAT
CGGATCTGTTCGGGCTGGAGATGCTGTGGAAGCTGGAGAGCGCCAACTTGGCGGATAAGG
CCGACGCGATGATGCTGTTTGTGCACTGGTTCCTAGTTCGTAACGGATTCCGTAACGTTG
GCGTTGGGGACGATAAAACGCTCAACAACGCCGTCGACCAGAGCGAGTTGCTGCCGGAAG
GATGGAACGGTAACAACAAATCGTACGCGCTGCGCTACATCATGAACAACGAGCTGTACA
TCCTGCATGGAACACTCTCGAACGATACGATGATTGTTAATTTGCTGCAAGCGCAGTCAC
TGCAGGTGTCGAATGCGGCCTTCAATCTGGACAAAACGATCACCTCGTTCAACGACAGCA
ACTTGACGAACGTTGTGGTCAGCATCGATGATCAGATCACCCGGCTGCAGACGGAGCTGA
TTAAACCGCTGTGCGATGGTGGATCGAAAAGCTCCAGCACGCAGACGCTAATTTCTTCGT
CGCCTAGTCCTGCCCAAGTAAATGTTGTGCCAGCGGGCGGTCCCAGGCGTATTCAGGTGC
TGCGTCCCAGCGGACTGCTGCTGCCATTCGGTGGTGGTGGTGTAGGTCGGGGCGATCTCA
ACCCGCTGGGAGGTGTTGTTGGCGGCGGTGGCGGCGGCGGTATGCTAATGGACCCAATGA
ACATGGGGCCCGGCAGAGTGGATCCATTTCTGCCCGGAGCGCGCATCGATCCGATGGGCC
CGTTTCCTCCCCGCGTGCAACGCCCCAACCCGAATCCGGACCATCTTCCCCCACCCGGGT
ACGACGATATGTTTATGTAAGGGGACGAAGCGTTTGCCTATATTTCGTTTCCATTATTCC
TTTTAAGTTTCGGTTACACACACACTGTGTGGAGTTTGTTAATCCTTAATTCGAATATAA
AATAAAAATACGTTTCAACGTACCT

consensusID : consensus_9025#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 951
fasta sequence

                              [TCTTGTCATTGTAACACAGATTGTTCGGAGAATTCGCACTCCTCACTAGTCGGCTGTTCTGGGACGCGGAAAAGTGGAATTGATTTGAAATTATTGTGAAATTGCACCAAAAACCACCATGCCGCAATCGGATCTGTTCGGGCTGGAGATGCTGTGGAAGCTGGAGAGCGCCAACTTGGCGGATAAGGCCGACGCGATGATGCTGTTTGTGCACTGGTTCCTAGTTCGTAACGGATTCCGTAACGTTGGCGTTGGGGACGATAAAACGCTCAACAACGCCGTCGACCAGAGCGAGTTGCTGCCGGAAGGATGGAACGGTAACAACAAATCGTACGCGCTGCGCTACATCATGAACAACGAGCTGTACATCCTGCATGGAACACTCTCGAACGATACGATGATTGTTGATTTGCTGCAAGCGCAGTCACTGCAGGTGTCGAATGCGGCCTTCAATCTGGACAAAACGATCACCTCGTTCAACGACAGCAACTTGACGAACGTTGTGGTCAGCATCGATGATCAGATCACCCGGCTGCAGACGGAGCTGATTAAACCGCTGTGGCGATGGTGGATCGAAAAGCTCCAGCACGCAGACGCTAATTTCTTCGTCGCCTAGTCCTGCCCAAGTAAATGTTGTGCCAACAGGCGGTCCCAGGCGTATTCAGGTGCTGCGTCCCAGCGGACTGCTGCTGCCATTCGGTGGTGGTGGTGTAGGTCGGGGCGATCTCAACCCGCTGGGAGGTGTTGTTGGCGGCGGTGGCGGCGGCGGTATGCTAATGGACCCAATGAACATGGGGCCCGGCAGAATGGATCCATTTCTGCCCGGAGCGCGCATCGATCCGATGGGCCCGTTTCCTCCCCGCGTGCAAGCCCCAACCCGAATTCGGACCATCTTCCCCCACCCGGGTACGACGATATGTTTATGTAAGGGGACGAGCGTTTCCCTATATC]

[+] EMBL CNS092KT             [TCTTGTCATTGTAACACAGATTGTTCGGAGAATTCGCACTCCTCACTAGTCGGCTGTTCTGGGACGCGGAAAAGTGGAATTGATTTGAAATTATTGTGAAATTGCACCAAAAACCACCATGCCGCAATCGGATCTGTTCGGGCTGGAGATGCTGTGGAAGCTGGAGAGCGCCAACTTGGCGGATAAGGCCGACGCGATGATGCTGTTTGTGCACTGGTTCCTAGTTCGTAACGGATTCCGTAACGTTGGCGTTGGGGACGATAAAACGCTCAACAACGCCGTCGACCAGAGCGAGTTGCTGCCGGAAGGATGGAACGGTAACAACAAATCGTACGCGCTGCGCTACATCATGAACAACGAGCTGTACATCCTGCATGGAACACTCTCGAACGATACGATGATTGTTGATTTGCTGCAAGCGCAGTCACTGCAGGTGTCGAATGCGGCCTTCAATCTGGACAAAACGATCACCTCGTTCAACGACAGCAACTTGACGAACGTTGTGGTCAGCATCGATGATCAGATCACCCGGCTGCAGACGGAGCTGATTAAACCGCTGTGGCGATGGTGGATCGAAAAGCTCCAGCACGCAGACGCTAATTTCTTCGTCGCCTAGTCCTGCCCAAGTAAATGTTGTGCCAACAGGCGGTCCCAGGCGTATTCAGGTGCTGCGTCCCAGCGGACTGCTGCTGCCATTCGGTGGTGGTGGTGTAGGTCGGGGCGATCTCAACCCGCTGGGAGGTGTTGTTGGCGGCGGTGGCGGCGGCGGTATGCTAATGGACCCAATGAACATGGGGCCCGGCAGAATGGATCCATTTCTGCCCGGAGCGCGCATCGATCCGATGGGCCCGTTTCCTCCCCGCGTGCAAGCCCCAACCCGAATTCGGACCATCTTCCCCCACCCGGGTACGACGATATGTTTATGTAAGGGGACGAGCGTTTCCCTATATC]
[+] EMBL CNS09BK5             [                     TGTTCGGAGAATTCGCACTCCTCACTAGTCGGCTGTTCTGGGACGCGGAAAAGTGGAATTGATTTGAAATTATTGTGAAATTGCACCAAAAACCACCATGCCGCAATCGGATCTGTTCGGGCTGGAGATGCTGTGGAAGCTGGAGAGCGCCAACTTGGCGGATAAGGCCGACGCGATGATGCTGTTTGTGCACTGGTTCCTAGTTCGTAACGGATTCCGTAACGTTGGCGTTGGGGACGATAAAACGCTCAACAACGCCGTCGACCAGAGCGAGTTGCTGCCGGAAGGATGGAACGGTAACAACAAATCGTACGCGCTGCGCTACATCATGAACAACGAGCTGTACATCCTGCATGGAACACTCTCGAACGATACGATGATTGTTGATTTGCTGCAAGCGCAGTCACTGCAGGTGTCGAATGCGGCCTTCAATCTGGACAAAACGATCACCTCGTTCAACGACAGCAACTTGACGAACGTTGTGGTCAGCATCGATGATCAGATCACCCGGCTGCAGACGGAGCTGATTAAACCGCTGT GCGATGGTGGATCGAAAAGCTCCAGCACGCAGACGCTAATTTCTTCGTC                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL BX608231             [                                                                                                                                                                                                                                                                                                                                                                                                                                                               CTACAATCTGGACAAAACGATCACCTCGTACAACGACAGCAACTAGACGAACGTTGGGGTCAGCATCGATGAACAGATCACCCGGCTGCAGACGGAGCTGAAAAAACCGCTG GGCGATGGTGGATCGAAAAGCTCCAGCACGCAGACGCTAATTTCCTCGTCGCCTAGTC                                                                                                                                                                                                                                                                                                                                             ]




>consensus_9025#1
TCTTGTCATTGTAACACAGATTGTTCGGAGAATTCGCACTCCTCACTAGTCGGCTGTTCT
GGGACGCGGAAAAGTGGAATTGATTTGAAATTATTGTGAAATTGCACCAAAAACCACCAT
GCCGCAATCGGATCTGTTCGGGCTGGAGATGCTGTGGAAGCTGGAGAGCGCCAACTTGGC
GGATAAGGCCGACGCGATGATGCTGTTTGTGCACTGGTTCCTAGTTCGTAACGGATTCCG
TAACGTTGGCGTTGGGGACGATAAAACGCTCAACAACGCCGTCGACCAGAGCGAGTTGCT
GCCGGAAGGATGGAACGGTAACAACAAATCGTACGCGCTGCGCTACATCATGAACAACGA
GCTGTACATCCTGCATGGAACACTCTCGAACGATACGATGATTGTTGATTTGCTGCAAGC
GCAGTCACTGCAGGTGTCGAATGCGGCCTTCAATCTGGACAAAACGATCACCTCGTTCAA
CGACAGCAACTTGACGAACGTTGTGGTCAGCATCGATGATCAGATCACCCGGCTGCAGAC
GGAGCTGATTAAACCGCTGTGGCGATGGTGGATCGAAAAGCTCCAGCACGCAGACGCTAA
TTTCTTCGTCGCCTAGTCCTGCCCAAGTAAATGTTGTGCCAACAGGCGGTCCCAGGCGTA
TTCAGGTGCTGCGTCCCAGCGGACTGCTGCTGCCATTCGGTGGTGGTGGTGTAGGTCGGG
GCGATCTCAACCCGCTGGGAGGTGTTGTTGGCGGCGGTGGCGGCGGCGGTATGCTAATGG
ACCCAATGAACATGGGGCCCGGCAGAATGGATCCATTTCTGCCCGGAGCGCGCATCGATC
CGATGGGCCCGTTTCCTCCCCGCGTGCAAGCCCCAACCCGAATTCGGACCATCTTCCCCC
ACCCGGGTACGACGATATGTTTATGTAAGGGGACGAGCGTTTCCCTATATC

consensusID : consensus_9025#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 690
fasta sequence

                              [CCCACGATTTAACTCCTCACTAGTGGCTGTTCTGGGACGCGGAAAAGTGGAATTGATTTGAAATTATTGTGAAATTGCACCAAAAACCACCATGCCGCAATCGGATCTGTTCGGGCTGGAGATGCTGTGGAAGCTGGAGAGCGCCAACTTGGCTGGATAAGTGCCGACGCGATGATGCTGTTTGTGCACTGGTTCCTAGTTCGTAACGGATTCCGTAACGTTGGCGTTGGGGACGATAAAACGCTCAACANCGCCGTCGACCAGAGCGAGTTGCTGCCGGAAGGATGGAACGGTAACAACAAATCGTACGCGCTGCGCTACATCATGAACAACGAGCTGTACATCCTGCATGGAACACTCTCGGAACGATACGACTGACTTGGTNTCAAACTANTGGCTGCAAGCGCAGTCACCTGCANGGTGTCGAATTGCGGCCTTCAATCTGGACAAAAACGATCACCTCGGTTCAACGACAGCAAACTTGACNCAACCGCTCTGTGAGTNCAGCATCNANCTGATCAGATCACCCGGCTGCAGACGNGAGCTGNATTTAAAACCGCTGTTGCGACTGNGTGGATCGAANACGCCTCCAGCCACGCAGCACGCCTAATTCTCTTCGNTACGCCCTAACTCCTGGCCAAGGTAACTGTCTGTGCCCANCGGCGGCGGCTCCCAACGCGGTATTCACGC]

[+] EMBL AL693111             [CCCACGATTTAACTCCTCACTAGTGGCTGTTCTGGGACGCGGAAAAGTGGAATTGATTTGAAATTATTGTGAAATTGCACCAAAAACCACCATGCCGCAATCGGATCTGTTCGGGCTGGAGATGCTGTGGAAGCTGGAGAGCGCCAACTTGGCTGGATAAGTGCCGACGCGATGATGCTGTTTGTGCACTGGTTCCTAGTTCGTAACGGATTCCGTAACGTTGGCGTTGGGGACGATAAAACGCTCAACANCGCCGTCGACCAGAGCGAGTTGCTGCCGGAAGGATGGAACGGTAACAACAAATCGTACGCGCTGCGCTACATCATGAACAACGAGCTGTACATCCTGCATGGAACACTCTCGGAACGATACGACTGACTTGGTNTCAAACTANTGGCTGCAAGCGCAGTCACCTGCANGGTGTCGAATTGCGGCCTTCAATCTGGACAAAAACGATCACCTCGGTTCAACGACAGCAAACTTGACNCAACCGCTCTGTGAGTNCAGCATCNANCTGATCAGATCACCCGGCTGCAGACGNGAGCTGNATTTAAAACCGCTGTTGCGACTGNGTGGATCGAANACGCCTCCAGCCACGCAGCACGCCTAATTCTCTTCGNTACGCCCTAACTCCTGGCCAAGGTAACTGTCTGTGCCCANCGGCGGCGGCTCCCAACGCGGTATTCACGC]




>consensus_9025#2
CCCACGATTTAACTCCTCACTAGTGGCTGTTCTGGGACGCGGAAAAGTGGAATTGATTTG
AAATTATTGTGAAATTGCACCAAAAACCACCATGCCGCAATCGGATCTGTTCGGGCTGGA
GATGCTGTGGAAGCTGGAGAGCGCCAACTTGGCTGGATAAGTGCCGACGCGATGATGCTG
TTTGTGCACTGGTTCCTAGTTCGTAACGGATTCCGTAACGTTGGCGTTGGGGACGATAAA
ACGCTCAACANCGCCGTCGACCAGAGCGAGTTGCTGCCGGAAGGATGGAACGGTAACAAC
AAATCGTACGCGCTGCGCTACATCATGAACAACGAGCTGTACATCCTGCATGGAACACTC
TCGGAACGATACGACTGACTTGGTNTCAAACTANTGGCTGCAAGCGCAGTCACCTGCANG
GTGTCGAATTGCGGCCTTCAATCTGGACAAAAACGATCACCTCGGTTCAACGACAGCAAA
CTTGACNCAACCGCTCTGTGAGTNCAGCATCNANCTGATCAGATCACCCGGCTGCAGACG
NGAGCTGNATTTAAAACCGCTGTTGCGACTGNGTGGATCGAANACGCCTCCAGCCACGCA
GCACGCCTAATTCTCTTCGNTACGCCCTAACTCCTGGCCAAGGTAACTGTCTGTGCCCAN
CGGCGGCGGCTCCCAACGCGGTATTCACGC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9025#0      -------GCCAAGAATCGGCACGAGGGGAGAAT-CGCACTCCTCACTAGTCGGCTGTTCT 52
consensus_9025#1      TCTTGTCATTGTAACACAGATTGTTCGGAGAATTCGCACTCCTCACTAGTCGGCTGTTCT 60
consensus_9025#2      -------------------------CCCACGATTTA-ACTCCTCACTAGT-GGCTGTTCT 33
                                                  *  **    ************* *********

consensus_9025#0      GGGACGCGGAAAAGTGGAATTGATTTGAAATTATTGTGAAATTGCACCAAAAACCACCAT 112
consensus_9025#1      GGGACGCGGAAAAGTGGAATTGATTTGAAATTATTGTGAAATTGCACCAAAAACCACCAT 120
consensus_9025#2      GGGACGCGGAAAAGTGGAATTGATTTGAAATTATTGTGAAATTGCACCAAAAACCACCAT 93
                      ************************************************************

consensus_9025#0      GCCGCAATCGGATCTGTTCGGGCTGGAGATGCTGTGGAAGCTGGAGAGCGCCAACTTGGC 172
consensus_9025#1      GCCGCAATCGGATCTGTTCGGGCTGGAGATGCTGTGGAAGCTGGAGAGCGCCAACTTGGC 180
consensus_9025#2      GCCGCAATCGGATCTGTTCGGGCTGGAGATGCTGTGGAAGCTGGAGAGCGCCAACTTGGC 153
                      ************************************************************

consensus_9025#0      -GGATAAG-GCCGACGCGATGATGCTGTTTGTGCACTGGTTCCTAGTTCGTAACGGATTC 230
consensus_9025#1      -GGATAAG-GCCGACGCGATGATGCTGTTTGTGCACTGGTTCCTAGTTCGTAACGGATTC 238
consensus_9025#2      TGGATAAGTGCCGACGCGATGATGCTGTTTGTGCACTGGTTCCTAGTTCGTAACGGATTC 213
                       ******* ***************************************************

consensus_9025#0      CGTAACGTTGGCGTTGGGGACGATAAAACGCTCAACAACGCCGTCGACCAGAGCGAGTTG 290
consensus_9025#1      CGTAACGTTGGCGTTGGGGACGATAAAACGCTCAACAACGCCGTCGACCAGAGCGAGTTG 298
consensus_9025#2      CGTAACGTTGGCGTTGGGGACGATAAAACGCTCAACANCGCCGTCGACCAGAGCGAGTTG 273
                      ************************************* **********************

consensus_9025#0      CTGCCGGAAGGATGGAACGGTAACAACAAATCGTACGCGCTGCGCTACATCATGAACAAC 350
consensus_9025#1      CTGCCGGAAGGATGGAACGGTAACAACAAATCGTACGCGCTGCGCTACATCATGAACAAC 358
consensus_9025#2      CTGCCGGAAGGATGGAACGGTAACAACAAATCGTACGCGCTGCGCTACATCATGAACAAC 333
                      ************************************************************

consensus_9025#0      GAGCTGTACATCCTGCATGGAACACTCTCG-AACGATACGA-TGA-TTGTTA-------A 400
consensus_9025#1      GAGCTGTACATCCTGCATGGAACACTCTCG-AACGATACGA-TGA-TTGTTG-------A 408
consensus_9025#2      GAGCTGTACATCCTGCATGGAACACTCTCGGAACGATACGACTGACTTGGTNTCAAACTA 393
                      ****************************** ********** *** *** *        *

consensus_9025#0      TTTGCTGCAAGCGCAGTCAC-TGCAGG-TGTCGAAT-GCGGCCTTCAATCTGGACAAAA- 456
consensus_9025#1      TTTGCTGCAAGCGCAGTCAC-TGCAGG-TGTCGAAT-GCGGCCTTCAATCTGGACAAAA- 464
consensus_9025#2      NTGGCTGCAAGCGCAGTCACCTGCANGGTGTCGAATTGCGGCCTTCAATCTGGACAAAAA 453
                       * ***************** **** * ******** ********************** 

consensus_9025#0      CGATCACCTCG-TTCAACGACAGCAA-CTTGACGAA----CGTTGTGG--TCAGCATCGA 508
consensus_9025#1      CGATCACCTCG-TTCAACGACAGCAA-CTTGACGAA----CGTTGTGG--TCAGCATCGA 516
consensus_9025#2      CGATCACCTCGGTTCAACGACAGCAAACTTGACNCAACCGCTCTGTGAGTNCAGCATCNA 513
                      *********** ************** ******  *    *  ****    ******* *

consensus_9025#0      T--GATCAGATCACCCGGCTGCAGACGG-AGCTGATT---AAACCGCTGTG-CGAT--GG 559
consensus_9025#1      T--GATCAGATCACCCGGCTGCAGACGG-AGCTGATT---AAACCGCTGTGGCGAT--GG 568
consensus_9025#2      NCTGATCAGATCACCCGGCTGCAGACGNGAGCTGNATTTAAAACCGCTGTTGCGACTGNG 573
                         ************************  *****  *   **********  ***    *

consensus_9025#0      TGGATCGAAAAG--CTCCAGC-ACGCAG-ACGC-TAATT-TCTTCGTCGC---CTAG-TC 609
consensus_9025#1      TGGATCGAAAAG--CTCCAGC-ACGCAG-ACGC-TAATT-TCTTCGTCGC---CTAG-TC 618
consensus_9025#2      TGGATCGAANACGCCTCCAGCCACGCAGCACGCCTAATTCTCTTCGNTACGCCCTAACTC 633
                      ********* *   ******* ****** **** ***** ******   *   ***  **

consensus_9025#0      CTGCCCAAG-TAAATGT-TGTGCCAGCGGGCGGTCCCAGGCGTATTCAGGTGCTGCGTCC 667
consensus_9025#1      CTGCCCAAG-TAAATGT-TGTGCCAACAGGCGGTCCCAGGCGTATTCAGGTGCTGCGTCC 676
consensus_9025#2      CTGGCCAAGGTAACTGTCTGTGCCCANCGGCGG-------CGGCTCCCAACGCGGTATTC 686
                      *** ***** *** *** ******    *****       **  * *    ** *  * *

consensus_9025#0      CAGCGGACTGCTGCTGCCATTCGGTGGTGGTGGTGTAGGTCGGGGCGATCTCAACCCGCT 727
consensus_9025#1      CAGCGGACTGCTGCTGCCATTCGGTGGTGGTGGTGTAGGTCGGGGCGATCTCAACCCGCT 736
consensus_9025#2      ACGC-------------------------------------------------------- 690
                        **                                                        

consensus_9025#0      GGGAGGTGTTGTTGGCGGCGGTGGCGGCGGCGGTATGCTAATGGACCCAATGAACATGGG 787
consensus_9025#1      GGGAGGTGTTGTTGGCGGCGGTGGCGGCGGCGGTATGCTAATGGACCCAATGAACATGGG 796
consensus_9025#2      ------------------------------------------------------------
                                                                                  

consensus_9025#0      GCCCGGCAGAGTGGATCCATTTCTGCCCGGAGCGCGCATCGATCCGATGGGCCCGTTTCC 847
consensus_9025#1      GCCCGGCAGAATGGATCCATTTCTGCCCGGAGCGCGCATCGATCCGATGGGCCCGTTTCC 856
consensus_9025#2      ------------------------------------------------------------
                                                                                  

consensus_9025#0      TCCCCGCGTGCAACGCCCCAACCCGAATCCGGACCATCTTCCCCCACCCGGGTACGACGA 907
consensus_9025#1      TCCCCGCGTGCAA-GCCCCAACCCGAATTCGGACCATCTTCCCCCACCCGGGTACGACGA 915
consensus_9025#2      ------------------------------------------------------------
                                                                                  

consensus_9025#0      TATGTTTATGTAAGGGGACGAAGCGTTTGCCTATATTTCGTTTCCATTATTCCTTTTAAG 967
consensus_9025#1      TATGTTTATGTAAGGGGACGA-GCGTTTCCCTATATC----------------------- 951
consensus_9025#2      ------------------------------------------------------------
                                                                                  

consensus_9025#0      TTTCGGTTACACACACACTGTGTGGAGTTTGTTAATCCTTAATTCGAATATAAAATAAAA 1027
consensus_9025#1      ------------------------------------------------------------
consensus_9025#2      ------------------------------------------------------------
                                                                                  

consensus_9025#0      ATACGTTTCAACGTACCT 1045
consensus_9025#1      ------------------
consensus_9025#2      ------------------