These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9035#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1021 fasta sequence [TGGAAAAAAAAAAAAAAAAACAAACAACAACGCTTGCTACAGCTCCGTACGGTTTTTTTCCGAACCATTACGGCTGTTAGAAATTAGAAAACATCTGAACGATAGCATCCTCCCATTCTTCAACACCATCAACACCACGTGC-GTACCACCGCCATGAACGTATCTATCGAACGGAAGCGGACTGATTGTGCAGCTCTGCCGAAGGCTGGCAGCGCGAAGAGGTGCTCCGAAAG-ACGGGCCTGTCTGCGGGGAAAGTGGATGTGTACTACTACAGCCGTGCAATGCGATCGGACACCTCACTGATCCCACCAATCAGACAAACTGCATCGATCTTCAAACAGCCGGTTACGGTGGTAAGATCGCAGGAACCGGATAATGCCAAAGCAAAGCGTGAACTGCAGCACGGCAGCCAGGTGAAACCGAAGCAGTTGTTTTGGGAGAAACGTTTAGAGAATCTCGGAGCCAGTAACACCCACAACGAAGAGATCGGATCGATCGAACTACCGAAGCGACTGCGACCGATAGGGCCGGGTATACGTGAAACGACGGTGCTGCAGTCGCTAGCCACTGCCCTACACCACAACACACTTCCCGTGACTGGACAGACGGCCTCGAAAACGTCGCTCAACACTAACGCGGGCGTGTTCACCAATCCACACCAGCCGCTAATGACGAACGTGACCATCACGGAGGAGGACGTTAAGCGGCAGGAGGAGCGCGTGCAGTATGCCCGGTTACGGCTACAGGAGGCGTTGCGTGCCTAAGATCCTGTACCCGTTCGTAGCCGATGGAGAAGTGAGAAAGTACTGATCTTTGGCGTTTCATCTGCATCGGAGCGGCAAACCATCCGACATGCTCGGTGCTTTGTCCACTTAAACCAACACACACCTACACTTTTACATTGCTAGACGTGATTTTTATCTTTTTACCTATGCGTATAAGTATGCAAGCTGAAAATAAATACAAATATTGTACGACTTTCTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGGCCC] [+] EMBL CNS09FBV [TGGAAAAAAAAAAAAAAAAACAAACAACAACGCTTGCTACAGCTCCGTACGGTTTTTTTCCGAACCATTACGGCTGTTAGAAATTAGAAAACATCTGAACGATAGCATCCTCCCATTCTTCAACACCATCAACACCACGTGCGGTACCACCGCCATGAACGTATCTATCGAACGGAAGCGGACTGATTGTGCAGCTCTGCCGAAGGCTGGCAGCGCGAAGAGGTGCTCCGAAAGCACGGGCCTGTCTGCGGGGAAAGTGGATGTGTACTACTACAGCCGTGCAATGCGATCGGACACCTCACTGATCCCACCAATCAGACAAACTGCATCGATCTTCAAACAGCCGGTTAC GTGGTAAGATCGCAGGAACCGGATAATGCCAAAGCAAAGCGTGAACTGCAGCACGGCAGCCAGGTGAAACGAAAGCAGTTGTTTTGGGAGAAACGTTTAGAGAA ] [+] EMBL CNS09658 [ AAAACAAACAAAAACGCTTGCTACAGCTCCGTACGGTTTTTTTCCGAACCATTACGGCTGTTAGAAATTAGAAAACATCTGAACGATAGCATCCTCCCATTCTTCAACACCATCAACACCACGTGC GTACCACCGCCATGAACGTATCTATCGAACGGAAGCGGACTGATTGTGCAGCTCTGCCGAAGGCTGGCAGCGCGAAGAGGTGCTCCGAAAG ACGGGCCTGTCTGCGGGGAAAGTGGATGTGTACTACTACAGCCGTGCAATGCGATCGGACACCTCACTGATCCCACCAATCAGACAAACTGCATCGATCTTCAAACAGCCGGTTACGGTGGTAAGATCGCAGGAACCGGATAATGCCAAAGCAAAGCGTGAACTGCAGCACGGCAGCCAGGTGAAACCGAAGCAGTTGTTTTGGGAGAAACGTTTAGAGAATCTCGGAGCCAGTAACACCCACAACGAAGAGATCGGATCGATCGAACTACCGAAGCGACTGCGACCGATAGGGCCGGGTATACGTGAAACGACGGTGCTGCAGTCGCTAGCCACTGCCCTACACCACAACACACTTCCCGTGACTGGACAGACGGCCTCGAAAACGTCGCTCAACACTAACGCGGGCGTGTTCACCAATCCACACCAGCCGCTAATGACGAACGTGACCATCACGGAGGAGGACGTTAAGCGGCAGGAGGAGCGCGTGCAGTATGCCCGGTTACGGCTACAGGAGGCGTTGCGTGCCTAAGATCCTGTACCCGTTCGTAGCCGATGGAGAAGTGAGAAAGTACTGATCTTTGGCGTTTCATCTGCATCGGAGCGGCAAACCATCCGACATGCTCGGTGCTTTGTCCACTTAAACCAACACACACCTACACTTTTACATTGCTAGACGTGATTTTTATCTTTTTACCTATGCGTATAAGTATGCAAGCTGAAAATAAATACAAATATTGTACGACTTTCTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGGCCC] [+] EMBL CNS0999E [ CAACGCTTGCTACAGCTCCGTACGG TTTTTTCCGAACCATTACGGCTGTTAGAAATTAGAAAACATCTGAACGATAGCATCCTCCCATTCTTCAATACCATCAACACCACGTGC GTACCACCGCCATGAACGTATCTATCGAACGGAAGCGGACTGATTGTGCAGCTCTGCCGAAGGCTGGCAGCGCGAAGAGGTGCTCCGAAAG ACGGGCCTGTCTGCGGGGAAAGTGGATGTGTACTACTACAGCCGTGCAATGCGATCGGACACCTCACTGATCCCACCAATCAGACAAACTGCATCGATCTTCAAACAGCCGGTTACGGTGGTAAGATCGCAGGAACCGGATAATGCCAAAGCAAAGCGTGAACTGCAGCACGGCAGCCAGGTGAAACCGAAGCAGTTGTTTTGGGAGAAACGTTTAGAGAATCTCGGAGCCAGTAACACCCACAACGAAGAGATCGGATCGATCGAACTACCGAAGCGACTGCGACCGATAGGGCCGGGTATACGTGAAAGAACGGTGCTGCAGTCGCTAGCCACTGCCCTACACCACAACACACTTCCCGTGACTGGACAGACGGCCTCAAAAACGTCGCTCAACACTAACGCGGGCGTGTTCACCAATCCACACCAGCCGCTAATGACGAACGTGACCATCACGGAGGAGGACGTTAAGCGGCAGGAGGAGCGCGTGCAGTATGCCCGGTTACGGCTACAGGAGGCGTTGCGTGCCTAAGATCCTGTAGCCGTTCGTAGCCGATGGAGAAGTGAGAAAGTACTGATCTTTGGCGTTTCATCTGCATCGGAGCGGCAAACCATCCGACATGCTCGGTGCTTTGTCCACCTTAACCCTCACACACCTACACTTTTACATTGCTAGACGTGATTTTTATC ] consensusID : consensus_9035#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 1014 fasta sequence [CCGATTTGCAGAGCAAACAAACAACAACGCTTGCTACAGCTCCGTACGGTTTTTTTCCGAACCATTACGGCTGTTAGAAATTAGAAAACATCTGAACGATAGCATCCTCCCATTCTTCAATACCATCAACACCACGTGCGTACCACCGCCATGAACGTATCTATCGAACGGAAGCGGACTGATTGTGCAGCTCTGCCGAAGGGCTGGCAGCGCGAAGAGGTGCTCCGAAAGACGGGCCTGTCTGCGGGGAAAGTGGATGTGTACTACTACAGCCGTGCAATGCGATCGGACACCTCACTGATCCCACCAATCAGACAAACTGCATCGATCTTCAAACAGCCGGTTACGGTGGTAAGATCGCAGGAACCGGATAATGCCAAAGCAAAGCG-TGAACTGCAGCACGGCAGCCAGGTGAAACCGAAGCAGTTGTTTTGGGAGAAACGTTTAGAGAATCTCGGAGCCAGTAACACCCACAACGAAGAGATCGGATCGATCGAACTACCG-AAGCGACTGCGACCGATAGGGCCGGGTATACGTGAAACGACGGTGCTGCAGTCGCTAGCCACTGCCCTACACCACAACACACTTCCCGTGACTGGACAGACGGCCTCGAAAACGTCGCTCAACACTAACGCGGGCGTGTTCACCAATCCACACCAGCCGCTAATGACGAACGTGACCATCACGGAGGAGGACGTTAAGC-GGCAGGAGGAGCGCGTGCAGTATGCCCGGTTACGGCTACAGGAGGCGTTGCGTGCCTAAGATCCTGTACCCGTTCGTAGCCGATGGAGAAGTGAGACAGTACTGATTTTTGGCGTTTCATCTGCATCGGAGCGGCAAACCATCCGACATGCTCGGTGCTTTGTCCACTTAAACCAACACACACCTACACTTTTACATTGCTAGACGTGATTCTTATCTTTTTACCTATGCGTATAAGTATGCAAGCTGAAAATAAATACAAATATTGTACGACTTTCTTTTAAAAAAAAAAAAAAAAAAAAGGCCACATGT] [+] EMBL BM611731 [CCGATTTGCAGAGCAAACAAACAACAACGCTTGCTACAGCTCCGTACGGTTTTTTTCCGAACCATTACGGCTGTTAGAAATTAGAAAACATCTGAACGATAGCATCCTCCCATTCTTCAATACCATCAACACCACGTGCGTACCACCGCCATGAACGTATCTATCGAACGGAAGCGGACTGATTGTGCAGCTCTGCCGAAGGGCTGGCAGCGCGAAGAGGTGCTCCGAAAGACGGGCCTGTCTGCGGGGAAAGTGGATGTGTACTACTACAGCCGTGCAATGCGATCGGACACCTCACTGATCCCACCAATCAGACAAACTGCATCGATCTTCAAACAGCCGGTTACGGTGGTAAGATCGCAGGAACCGGATAATGCCAAAGCAAAGCG TGAACTGCAGCACGGCAGCCAGGTGAAACCGAAGCAGTTGTTTTGGGAGAAACGTTTAGAGAATCTCGGAGCCAGTAACACCCACAACGAAGAGATCGGATCGATCGAACTACCG AAGCGACTGCGACCGATAGGGCCGGGTATACGTGAAACGACGGTGCTGCAGTCGCTAGCCACTGCCCTACACCACAACACACTTCCCGTGACTGGACAGACGGCCTCGAAAACGTCGCTCAACACTAACGCGGGCGTGTT ] [+] EMBL BM614857 [ ccgGAGCAAACAAACAACAACGCTTGCTACAGCTCCGTACGG TTTTTTCCGAACCATTACGGCTGTTAGAAATTAGAAAACATCTGAACGATAGCATCCTCCCATTCTTCAATACCATCAACACCACGTGCGTACCACCGCCATGAACGTATCTATCGAACGGAAGCGGACTGATTGTGCAGCTCTGCCGAAGGGCTGGCAGCGCGAAGAGGTGCTCCGAAAGACGGGCCTGTCTGCGGGGAAAGTGGATGTGTACTACTACAGCCGTGCAATGCGATCGGACACCTCACTGATCCCACCAATCAGACAAACTGCATCGATCTTCAAACAGCCGGTTACGGTGGTAAGATCGCAGGAACCGGATAATGCCAAAGCAAAGCG TGAACTGCAGCACGGCAGCCAGGTGAAACCGAAGCAGTTGTTTTGGGAGAAACGTTTAGAGAATCTCGGAGCCAGTAACACCCACAACGAAGAGATCGGATCGATCGAACTACCG AAGCGACTGCGACCGATAGGGCCGGGTATACGTGAAACGACGGTGCTGCAGTCGCTAGCCACTGCCCTACACCACAACACACTTCCCGTGACTGGACAGACGGCCTCGAAAACGTCGCTCAACACTAACGCCGGCGTGTTCACCAATCCACACCAGCCGCTAATGACGAACGTGACCATCACGGAGGAGGACGTT ] [+] EMBL CNS08TD6 [ actggaAAACAAACAACAACGCTTGCTACAGCTCCGTACGGTTTTTTTCCGAACCATTACGGCTGTTAGAAATTAGAAAACATCTGAACGATAGCATCCTCCCATTCTTCAATACCATCAACACCACGTGCGTACCACCGCCATGAACGTATCTATCGAACGGAAGCGGACTGATTGTGCAGCTCTGCCGAA GGCTGGCAGCGCGAAGAGGTGCTCCGAAAGACGGGCCTGTCTGCGGGGAAAGTGGATGTGTACTACTACAGCCGTGCAATGCGATCGGACACCTCACTGATCCCACCAATCAGACAAACTGCATCGATCTTCAAACAGCCGGTTACGGTGGTAAGATCGCAGGAACCGGATAATGCCAAAGCAAAGCGTTGAACTGCAGCACGGCAGCCAGGTGAAACCGAAGCAGTTGTTTTGGGAGAAACGTTTAGAGAATCTCGGAGCCAGTTACACCCACAACGAAGAGATCGGATCGATCGAACTACCGTTTTTGACTGCGACCGATA GGCCGGGTATACGTGAAACGACGGTGCTGCAGTCGCTAGCCACTGCCCTACACCACAACACACTTCCCGTGACTGGACAGACGGCCTCGAAAACGTCGCTCAACACTAACGCGGGCGTGTTCACCAATCCACACCAGCCGCTAATGACGAACGTGACCATCACGGAGGAGGACGTTAAGC GGCAGGAGGAGCGCGTGCAGTATGCCCGGTTACGGCTACAGGAGGCGTTGCGTGCCTAAGATCCTGTACCCGTTCGTAGCCGATGGAGAAGTGAGACAGTACTGATCTTTGGCGTTTCATCTGCATCGGAGCGGCAAACCATCCGACATGCTCGGTGCTTTGTCCACTTAAACCAACACACACCTACACTTTTACATTGCTAGACGTGATTTTTATCTTTTTACCTATGCGTATAAGTATGCAAGCTGAAAATAAATACAAATATTGTACGACTTTCTTTTAAAAAAAAAAAAAAAAAAAAGGCCACATGT] [+] EMBL BX625055 [ CGCTTGCTACAGCTCCGTACGG TTTTTTCCGAACCATTACGGCTGTTAGAAATTAGAAAACATCTGAACGATAGCATCCTCCCATTCTTCAATACCATCAACACCACGTGCGTACCACCGCCATGAACGTATCTATCGAACGGAAGCGGACTGATTGTGCAGCTCTGCCGAAGGGCTGGCAGCGCGAAGAGGTGCTCCGAAAGACGGGCCTGTCTGCGGGGAAAGTGGATGTGTACTACTACAGCCGTGCAATGCGATCGGACACCTCACTGATCCCACCAATCAGACAAACTGCATCGATCTTCAAACAGCCGGTTACGGTGGTAAGATCGCAGGAACCGGATAATGCCAAAGCAAAGCG TGAACTGCAGCACGGCAGCCAGGTGAAACCGAAGCAGTTGTTTTGGGAGAAACGTTTAGAGAATCTCGGAGCCAGTAACACCCACAACGAAGAGATCGGATCGATCGAACTACCG AAGCGACTGCGACCGATAGGGCCGGGTATACGTGAAACGACGGTGCTGCAGTCGCTAGCCACTGCCCTACACCACAACACACTTCCCGTGACTGGACAGACGGCCTCAAAAACGTCGCTCAACACTAACGCGGGCGTGTTCACCAATCCACACCAGCCGCTAATGACGAACGTGACCATCACGGANGAGGACGTTAAGC GGCAGGAGGAGCGCGTGCAGTAT ] [-] EMBL CNS08TD7 [ TACAGCTCCGTACGGTTTTTTTCCGAACCATAACGGCTGTTAGAAATTAGAAAACATCTGAACGATAGCATCCTCCCATTCTTCAATACCATCAACACAACGTGCGTACCACCGCCATGAACGTTTCTATCGAACGGAAGCGAACTGATTGTGCAGTTCTGCCGAAGGGCTGGCAGCGCGAAAAGGTGCTCCGAAAAACGGGCCTGTCTGCGGGGAAAGTGGATGTGTACTACAACAGCCGTGCAATGCGATCGGACACCTCACTGATCCCACCAATCAGACAAACTGCATCGATCTTCAAACAGCCGGTTACGGTGGTAAGATCGCAGGAACCGGATAATGCCAAAGCAAAGCG TGAACTGCAGCACGGCAGCCAGGTGAAACCGAAGCAGTTGTTTTGGGAGAAACGTTTAGAGAATCTCGGAGCCAGTAACACCCACAACGAAGAGATCGGAAAAAACGAACTACCG AAGCAACTGCGACCGATAGGGCCGGGTATACGTGAAACGACGGTGCTGCAGTCGCTAGCCACTGCCCTACACCACAACACACTTCCCGTTACTGAACAAACGGCCTCGAAAACGTCGCTCAAAACTAACGCGGGCGTGTTCACCAATCCACACCAGCCGCTAATGACGAACGTGACCATCACGGAGGAGGACGTTAAGC GGCAGGAGGAGCGCGTGCAGTATGCCCGGTTACGGCTACAGGAGGCGTTGCGTGCCTAAGATCCTGTACCCGTTCGTAGCCGATGGAGAAGTGAGACAGTACTGATTTTTGGCGTTTCATCTGCATCGGAGCGGCAAACCATCCGACATGCTCGGTGCTTTGTCCACTTAAACCAAAACACACCTACACTTTTACATTGCTAGACGTGATTCTTATCTTTTTACCTATGCGTATAAGTATGCAAGCTGAAAATAAATACAAATATTGTACGACTTTCTTTTAAAAAAAA ] [+] EMBL BM595611 [ ccgTTTTCCGAACCATTACGGCTGTTAGAAATTAGAAAACATCTGAACGATAGCATCCTCCCATTCTTCAATACCATCAACACCACGTGCGTACCACCGCCATGAACGTATCTATCGAACGGAAGCGGACTGATTGTGCAGCTCTGCCGAAGGGCTGGCAGCGCGAAGAGGTGCTCCGAAAGACGGGCCTGTCTGCGGGGAAAGTGGATGTGTACTACTACAGCCGTGCAATGCGATCGGACACCTCACTGATCCCACCAATCAGACAAACTGCATCGATCTTCAAACAGCCGGTTACGGTGGTAAGATCGCAGGAACCGGATAATGCCAAAGCAAAGCG TGAACTGCAGCACGGCAGCCAGGTGAAACCGAAGCAGTTGTTCTGGGAGAAACGTTTAGAGAATCTCGGAGCCAGTAACACCCACAACGAAGAGATCGGATCGATCGAACTACCG AAGCGACTGCGACCGATAGGGCCGGGTATACGTGAAACGACGGTGCTGCAGTCGCTAGCCACTGCCCTACACCACAACACACTTCCCGTGACTGGACAGACGGCCTCGAAAACGTCGCTCAACACTAACGCCGGCGTGTTCACCAATCCACACCAGCCG ] [-] EMBL CNS0999F [ ACAACGTGCGTACCACCGCCATGAACGTGTCTATCGAACGGAAGCGGACTGATTGTGCAGTTCTGCCGAAGGGCTGGCAGCGCGAAGAGGTGCTCCGAAAAACGGGCCTGTCTGCGGGGAAAGTGGATGTGTACTACAACAGCCGTGCAATGCGATCGGACACCTCACTGATCCCACCAATCAGACAAACTGCATCGATCTTCAAACAGCCGGTTACGGTGGTAAGATCGCAGGAACCGGATAATGCCAAAGCAAAGCG TGAACTGCAGCACGGCAGCCAGGTGAAACCGAAGCAGTTGTTTTGGGAGAAACGTTTAGAGAATCTCGGAGCCAGTAAAACCCACAACGAAGAGATCGGATCGATCGGACTACCG AAGCAACTGCGACCGATAGGGCCGGGTATACGTGAAACGACGGTGCTGGAGTCGCTAGCAACTGCCCTACACCACAACACACTTCCCGTAACTGAACAAACGGCCTCAAAAACGTCGCTCAAAACTAACGCGGGCGTGTTCACCAATCCACACCAGCCGCTAATGACGAACGTGACCATCACGGAGGAGGACGTTAAGC GGCAGGAGGAGCGCGTGCAGTATGCCCGGTTACGGCTACAGGAGGCGTTGCGTGCCTAAGATCCTGTAGCCGTTCGTAGCCGATGGAGAAGTGAGACAGTACTGATTTTTGGCGTTTCATCTGCATCGGAGCGGCAAACCATCCCACATGCTCGGTGCTTTGTCCACCTTAACCCTCACACACCTACACTTTTACATTGCTAGACGTGATTCTTATCTTTTTACCTATGCGTATAAGTATGCAAGCTGAAAAT ] [-] EMBL CNS09FBW [ CGGTGCTGCAGTCGCTAGCAACTGCCCTACACCACAACACACTTCCCGTGACTGGACAGACGGCCTCGAAAACGTCGCTCAAAACTAACGCGGGCGTGTTCACCAATCCACACCAGCCGCTAATGACGAACGTGACCATCACGGAGGAGGACGTTAAGCGGGCAGGAGGAGCGCGTGCAGTATGCCCGGTTACGGCTACAGGAGGCGTTGCGTGCCTAAGATCCTGTACCCGTTCGTAGCCGATGGAGAAGTGAGACAGTACTGATTTTTGGCGTTTCATCTGCATCGGAGCGGCAAACCATCCGACATGCTCGGTGCTTTGTCCACTTAAACCAAAACACACCTACACTTTTACATTGCTAGACGTGATTCTTATCTTTTTACCTATGCGTATAAGTATGCAAGCTGAAAATAAATACAAATATTGTACGACTTTCTTTAAAAAAAAAAAAAAAAA ] consensusID : consensus_9035#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 624 fasta sequence [CAAACAGTAGTAGTGCACTGCGCCGGAAGTTTCCACCGTCAGTACCGCTCGGCGGAAGCAACTCCCTCACCGCTACACCAATAAGCGCTGGGTGTGGTGTGAAGCCTTCATCTCAGTTCGATTACAGCCGTGCAATGCGATCGGACACCTCACTGATCCCACCAATCAGACAAACTGCATCGATCTTCAAACAGCCGGTTACGGTGGTAAGATCGCAGGAACCGGATAATGCCAAAGCAAAGCGTGAACTGCAGCACGGCAGCCAGGTGAAACCGAAGCAGTTGTTTTGGGAGAAACGTTTAGAGAATCTCGGAGCCAGTAACACCCACAACGAAGAGATCGGATCGATCGAACTACCGAAGCGACTGCGACCGATAGGGCCGGGTATACGTGAAACGACGGTGCTGCAGTCGCTAGCCACTGCCCTACACCACAACACACTTCCCGTGACTGGACAGACGGCCTCTAAAACGTCGCTCAACACTAACGCCGGCGTGTTCACCAATCCACACCAGCCGCTAATGACGAACGTGACCATCACGGAGGAGGACGTTAAGCCGCAGGAGGAGCGCGTGCAGTATGCCCGGTTACGGCTACAGGAGGCGTTGCGTGCCTAAGATCCTG] [+] EMBL BX617758 [CAAACAGTAGTAGTGCACTGCGCCGGAAGTTTCCACCGTCAGTACCGCTCGGCGGAAGCAACTCCCTCACCGCTACACCAATAAGCGCTGGGTGTGGTGTGAAGCCTTCATCTCAGTTCGATTACAGCCGTGCAATGCGATCGGACACCTCACTGATCCCACCAATCAGACAAACTGCATCGATCTTCAAACAGCCGGTTACGGTGGTAAGATCGCAGGAACCGGATAATGCCAAAGCAAAGCGTGAACTGCAGCACGGCAGCCAGGTGAAACCGAAGCAGTTGTTTTGGGAGAAACGTTTAGAGAATCTCGGAGCCAGTAACACCCACAACGAAGAGATCGGATCGATCGAACTACCGAAGCGACTGCGACCGATAGGGCCGGGTATACGTGAAACGACGGTGCTGCAGTCGCTAGCCACTGCCCTACACCACAACACACTTCCCGTGACTGGACAGACGGCCTCTAAAACGTCGCTCAACACTAACGCCGGCGTGTTCACCAATCCACACCAGCCGCTAATGACGAACGTGACCATCACGGAGGAGGACGTTAAGCCGCAGGAGGAGCGCGTGCAGTATGCCCGGTTACGGCTACAGGAGGCGTTGCGTGCCTAAGATCCTG] consensusID : consensus_9035#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 593 fasta sequence [AGAATNGCCCCAGGGTTAACTACAGCTCGTACGGTTTCCTCCGAACCATTACGGCTGTTAGAAATTAGAAAACATCTGAACGATAGCATCCTCCCATTCTTCAATACCATCAACACCACGTGCGTACCACCGCCATGAACGTATCTATCGAACGGAAGCGGACTGATTGTGCAGCTCTGCCGAAGGGCTGGCAGCGCGAAGAGGTGCTCCGAAAGACGGGCCTGTCTGCGGGGAAAGTGGATGTGTACTACTACAGCCGTGCAATGCGATCGGACACCTCACTGATCCCACCAATCAGACAAACTGCATCGATCTTCAAACAGCCGGTTACGGTGGTAAGATCGCAGGAACCGGATAATGCCAAAGCAAAGCGTGAACTGCAGCACGGCAGCCAGGTGAAACCGAACGCAGCCGTCGGGAGAAACGTAGAGAATCTCGGAGCCAGTAACACCCACAACGAACGCAGATCGGATCGATCGAACTACCGAAGCGACTAGCGACCGATAGGAGACCGGGTATACGTAGAAACAGACAGGTAGCTGCAGANCGCTAGCCCACTGCCTACANCCACAACACACTTCCCGACGACTGGA] [+] EMBL AL693501 [AGAATNGCCCCAGGGTTAACTACAGCTCGTACGGTTTCCTCCGAACCATTACGGCTGTTAGAAATTAGAAAACATCTGAACGATAGCATCCTCCCATTCTTCAATACCATCAACACCACGTGCGTACCACCGCCATGAACGTATCTATCGAACGGAAGCGGACTGATTGTGCAGCTCTGCCGAAGGGCTGGCAGCGCGAAGAGGTGCTCCGAAAGACGGGCCTGTCTGCGGGGAAAGTGGATGTGTACTACTACAGCCGTGCAATGCGATCGGACACCTCACTGATCCCACCAATCAGACAAACTGCATCGATCTTCAAACAGCCGGTTACGGTGGTAAGATCGCAGGAACCGGATAATGCCAAAGCAAAGCGTGAACTGCAGCACGGCAGCCAGGTGAAACCGAACGCAGCCGTCGGGAGAAACGTAGAGAATCTCGGAGCCAGTAACACCCACAACGAACGCAGATCGGATCGATCGAACTACCGAAGCGACTAGCGACCGATAGGAGACCGGGTATACGTAGAAACAGACAGGTAGCTGCAGANCGCTAGCCCACTGCCTACANCCACAACACACTTCCCGACGACTGGA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9035#1 ---CCGATTTGCAGAGCAAACAAACAACAACGCTTGCTACAGCTCCGTACGGTTTTTTTC 57 consensus_9035#3 -----------------AGAATNGCCCCAGGGTTAACTACAGCTC-GTACGGTTTCCT-C 41 consensus_9035#0 TGGAAAAAAAAAAAAAAAAACAAACAACAACGCTTGCTACAGCTCCGTACGGTTTTTTTC 60 consensus_9035#2 ------------------------------------------------------------ consensus_9035#1 CGAACCATTACGGCTGTTAGAAATTAGAAAACATCTGAACGATAGCATCCTCCCATTCTT 117 consensus_9035#3 CGAACCATTACGGCTGTTAGAAATTAGAAAACATCTGAACGATAGCATCCTCCCATTCTT 101 consensus_9035#0 CGAACCATTACGGCTGTTAGAAATTAGAAAACATCTGAACGATAGCATCCTCCCATTCTT 120 consensus_9035#2 ------------------------------------------------------------ consensus_9035#1 CAATACCATCAACACCACGTGCGTACCACCGCCATGAACGTATCTATCGAACGGAAGCGG 177 consensus_9035#3 CAATACCATCAACACCACGTGCGTACCACCGCCATGAACGTATCTATCGAACGGAAGCGG 161 consensus_9035#0 CAACACCATCAACACCACGTGCGTACCACCGCCATGAACGTATCTATCGAACGGAAGCGG 180 consensus_9035#2 --------CAAACAGTAGTAGTG---CACTGCGCCGGAAGTTTCCACCGT-CAGTACCGC 48 **** * * * *** ** * * ** ** * ** * * * ** consensus_9035#1 ACTGATTGTGCAGCTCTGCCGAAGGGCTGGCAGCGCGAAGAGGTGCTCCGAAAGACGGGC 237 consensus_9035#3 ACTGATTGTGCAGCTCTGCCGAAGGGCTGGCAGCGCGAAGAGGTGCTCCGAAAGACGGGC 221 consensus_9035#0 ACTGATTGTGCAGCTCTGCCGAAGG-CTGGCAGCGCGAAGAGGTGCTCCGAAAGACGGGC 239 consensus_9035#2 TCGGCGGAAGCAACTCCCTCA------CCGCTACACCAATAAGCGCT---------GGGT 93 * * *** *** * ** * * ** * * *** *** consensus_9035#1 CTGTCTGCGGGGAAAGTGGATGTGTACTACTACAGCCGTGCAATGCGATCGGACACCTCA 297 consensus_9035#3 CTGTCTGCGGGGAAAGTGGATGTGTACTACTACAGCCGTGCAATGCGATCGGACACCTCA 281 consensus_9035#0 CTGTCTGCGGGGAAAGTGGATGTGTACTACTACAGCCGTGCAATGCGATCGGACACCTCA 299 consensus_9035#2 GTGG-TGTGAAGCCTTCATCTCAGTTCGATTACAGCCGTGCAATGCGATCGGACACCTCA 152 ** ** * * * ** * * ****************************** consensus_9035#1 CTGATCCCACCAATCAGACAAACTGCATCGATCTTCAAACAGCCGGTTACGGTGGTAAGA 357 consensus_9035#3 CTGATCCCACCAATCAGACAAACTGCATCGATCTTCAAACAGCCGGTTACGGTGGTAAGA 341 consensus_9035#0 CTGATCCCACCAATCAGACAAACTGCATCGATCTTCAAACAGCCGGTTACGGTGGTAAGA 359 consensus_9035#2 CTGATCCCACCAATCAGACAAACTGCATCGATCTTCAAACAGCCGGTTACGGTGGTAAGA 212 ************************************************************ consensus_9035#1 TCGCAGGAACCGGATAATGCCAAAGCAAAGCGTGAACTGCAGCACGGCAGCCAGGTGAAA 417 consensus_9035#3 TCGCAGGAACCGGATAATGCCAAAGCAAAGCGTGAACTGCAGCACGGCAGCCAGGTGAAA 401 consensus_9035#0 TCGCAGGAACCGGATAATGCCAAAGCAAAGCGTGAACTGCAGCACGGCAGCCAGGTGAAA 419 consensus_9035#2 TCGCAGGAACCGGATAATGCCAAAGCAAAGCGTGAACTGCAGCACGGCAGCCAGGTGAAA 272 ************************************************************ consensus_9035#1 CCGAA-GCAGTTGTTTTGGGAGAAACGTTTAGAGAATCTCGGAGCCAGTAACACCCACAA 476 consensus_9035#3 CCGAACGCAGCCGTC--GGGAGAAACGT--AGAGAATCTCGGAGCCAGTAACACCCACAA 457 consensus_9035#0 CCGAA-GCAGTTGTTTTGGGAGAAACGTTTAGAGAATCTCGGAGCCAGTAACACCCACAA 478 consensus_9035#2 CCGAA-GCAGTTGTTTTGGGAGAAACGTTTAGAGAATCTCGGAGCCAGTAACACCCACAA 331 ***** **** ** *********** ****************************** consensus_9035#1 CGAAG--AGATCGGATCGATCGAACTACCGAAGCGACT-GCGACCGATAGG--GCCGGGT 531 consensus_9035#3 CGAACGCAGATCGGATCGATCGAACTACCGAAGCGACTAGCGACCGATAGGAGACCGGGT 517 consensus_9035#0 CGAAG--AGATCGGATCGATCGAACTACCGAAGCGACT-GCGACCGATAGG--GCCGGGT 533 consensus_9035#2 CGAAG--AGATCGGATCGATCGAACTACCGAAGCGACT-GCGACCGATAGG--GCCGGGT 386 **** ******************************* ************ ****** consensus_9035#1 ATACGT-GAAAC-GACGGT--GCTGCAG-TCGCTAGCC-ACTGCCCTACACCACAACACA 585 consensus_9035#3 ATACGTAGAAACAGACAGGTAGCTGCAGANCGCTAGCCCACTGCCTACANCCACAACACA 577 consensus_9035#0 ATACGT-GAAAC-GACGGT--GCTGCAG-TCGCTAGCC-ACTGCCCTACACCACAACACA 587 consensus_9035#2 ATACGT-GAAAC-GACGGT--GCTGCAG-TCGCTAGCC-ACTGCCCTACACCACAACACA 440 ****** ***** *** * ******* ******** ****** ********** consensus_9035#1 CTTCCCG-TGACTGGACAGACGGCCTCGAAAACGTCGCTCAACACTAACGCGGGCGTGTT 644 consensus_9035#3 CTTCCCGACGACTGGA-------------------------------------------- 593 consensus_9035#0 CTTCCCG-TGACTGGACAGACGGCCTCGAAAACGTCGCTCAACACTAACGCGGGCGTGTT 646 consensus_9035#2 CTTCCCG-TGACTGGACAGACGGCCTCTAAAACGTCGCTCAACACTAACGCCGGCGTGTT 499 ******* ******* consensus_9035#1 CACCAATCCACACCAGCCGCTAATGACGAACGTGACCATCACGGAGGAGGACGTTAAGCG 704 consensus_9035#3 ------------------------------------------------------------ consensus_9035#0 CACCAATCCACACCAGCCGCTAATGACGAACGTGACCATCACGGAGGAGGACGTTAAGCG 706 consensus_9035#2 CACCAATCCACACCAGCCGCTAATGACGAACGTGACCATCACGGAGGAGGACGTTAAGCC 559 consensus_9035#1 GCAGGAGGAGCGCGTGCAGTATGCCCGGTTACGGCTACAGGAGGCGTTGCGTGCCTAAGA 764 consensus_9035#3 ------------------------------------------------------------ consensus_9035#0 GCAGGAGGAGCGCGTGCAGTATGCCCGGTTACGGCTACAGGAGGCGTTGCGTGCCTAAGA 766 consensus_9035#2 GCAGGAGGAGCGCGTGCAGTATGCCCGGTTACGGCTACAGGAGGCGTTGCGTGCCTAAGA 619 consensus_9035#1 TCCTGTACCCGTTCGTAGCCGATGGAGAAGTGAGACAGTACTGATTTTTGGCGTTTCATC 824 consensus_9035#3 ------------------------------------------------------------ consensus_9035#0 TCCTGTACCCGTTCGTAGCCGATGGAGAAGTGAGAAAGTACTGATCTTTGGCGTTTCATC 826 consensus_9035#2 TCCTG------------------------------------------------------- 624 consensus_9035#1 TGCATCGGAGCGGCAAACCATCCGACATGCTCGGTGCTTTGTCCACTTAAACCAACACAC 884 consensus_9035#3 ------------------------------------------------------------ consensus_9035#0 TGCATCGGAGCGGCAAACCATCCGACATGCTCGGTGCTTTGTCCACTTAAACCAACACAC 886 consensus_9035#2 ------------------------------------------------------------ consensus_9035#1 ACCTACACTTTTACATTGCTAGACGTGATTCTTATCTTTTTACCTATGCGTATAAGTATG 944 consensus_9035#3 ------------------------------------------------------------ consensus_9035#0 ACCTACACTTTTACATTGCTAGACGTGATTTTTATCTTTTTACCTATGCGTATAAGTATG 946 consensus_9035#2 ------------------------------------------------------------ consensus_9035#1 CAAGCTGAAAATAAATACAAATATTGTACGACTTTCTTTTAAAAAAAAAAAAAAAAAAAA 1004 consensus_9035#3 ------------------------------------------------------------ consensus_9035#0 CAAGCTGAAAATAAATACAAATATTGTACGACTTTCTTTAAAAAAAAAAAAAAAAAAAAA 1006 consensus_9035#2 ------------------------------------------------------------ consensus_9035#1 GGCCACATGT----- 1014 consensus_9035#3 --------------- consensus_9035#0 AAAAAAAAAGGGCCC 1021 consensus_9035#2 --------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||