cluster # 9038

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Anopheles gambiae
cluster # 9038 cluster # 9038 Sequences # 13 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9038#0 length = 2197 sequences # 10

consensus_9038#1 length = 784 sequences # 1
consensus_9038#2 length = 650 sequences # 2

consensusID : consensus_9038#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 2197
fasta sequence

                              [CCGATCTGTTCACCGCGTACCTGCAGCAGACGGACGTGATGAGCATGGCGGCCTCCATCAGCCACTTTTTGAACTGCTTCCTGACGGTGTCGACCGGTGGCTACCAGCCGGTGGCGAACGGTACCGGCGCCGACGGGGACGGCCAGCTGGCGGACGAGTTTGGACCGAAGGCCGGGGGCAAAAAGCAAAACAAACAGAGCAAGCGGGGAGGAGGAGGAGGAGGTGGAAAGGGTGCCGCGGGTGGTGGACGTAAGGCCACCTTTTCCGTGCCCTCGTCCGACAACTGCGAATGGACGGCGCTGACGTCCAAGACGCTGTGGGCACAGATCCGCCAGGAGCTGAAGGCGTACTGGGACTTTGAGCTGACGGTAGAGCAGCCGGCAAAGGAGGGCAAGGAAAGCAAGGCAGCGGTGATCGACTCGATCGAGCCGCTGATCGGTGCGTTCAAGCTGCAGAAAATCTCGCTGCTGCGTTCGTTCTGCCTGAAGACGGGCGTGCAGATTCTGCTGCAGGAGTACGCGTTCGAGCAGCGCAACCGGCCCGCGTTCACCGATGCGGACATCGTGAACGTGTTCCCGGTGGTGAAGCACATCAATCCGCGCGCCTCCGACGCGTACAACTTCTACACGACCGGCCAGACGAAGATCCAGCAGGGCTACCTGCAGGACGGGTACGGGCTGATCAGCGAAGCGCTCAACCTGCTGAACAACGTGTACGGCGCGATGCATCCGGAGAATGCCCAGTGCCTGCGCATGCTGGCCCGGCTCAGCTACATTATGGGCGA-TCCGCAGG-AAGCGCTCGCGATCCAGCAGCGTG-CCGTGCTGATGAGCGAGCGCGT-GAACGGGGTCGACCATCCGTACACGA-TTTCGGAATATGGCCACCTTGCA-TTGTACTGTTTTGCCAACAGTCAAATCACCACCGCACTTAAGCTGCTGTACCGTG-CCCGGTATCTGGCGACCATCGTGTGCGGCGAGAACCATCCCGACATTGCGCTGATGGATAGCAACATCAGCTTGATCCTGCACGCAGTCGGTGAGTACGAACTGTCGCTGCGCTTCCTGGAGCACGCGCTCGCCCTCAACATTCGGTACTACGGCGAAAAGTCGCTCAAGGTGGCAGTTAGCTACCATCTAGTGGCGCGAACGCAAAGCTGCATGGGCGACTTCCGATCCGCGTTGGTCAACGAAAAGGAAACGTACGCTATCTACAAACAGCAGCTCGGTGAAAACCATGAAAAGACGCAGGAATCCTCCGAATGCCTTCGCCACCTGACGCAGCAGGCGGTCGTGCTGCAGAAGAAGATGAACTACGCCAACGGCAAGCTGCTGAGCACCGGGTTGCCCCCGATTCACATTCAGCCAC-CCTCGATGGGCTCGGTGCTGGACATGCTGAATGCAATCAATGGCATCATTTTTGTACAAATTAGTTCCAAAGAGATTGCCAACTTCAAGAACGAAATCGAAAAGCGCCAGAAGGAGGCGGGCGCCCAGTCGCAACAGCCCGGCGGTGGTCCGGTGCAAGCCAACCAGGAGGAAGTCGATCAGATGCTGATGGAAACGATGCAAAAGACGGCCGCCGGCATTCCGTTCGAGGAGCAGGATGGCGAGAAGAAGGACGGTGCGGCGGTAGAGAAGAAGCCCGCCGAGGTGACGTCGAGTTGAAGCCGATGCACCACGATGATGCGGTAACGGTCGCCGCTGCTGCAGCTGCGGTTTGCCTTGGGTCGCCAAAAATGATGGGACAGCTGTGGAGGACGCCCGCTGCCGTGCAGAACACACACACACACACACATACACAGTGGAAAGCCAGTTCACTAATGGAGAAGAATTTGTGGTAGAATAGTTTTCGATTTGGATACGTTTTACTGTCTTTGTTTTGGCGCCGCGCGGTGACAATACGCCCCGCGTGGTGTTTAGTGCTAAGCAGCGTGTATGCTGTGCCTTTTCTTTTTCTTCTTCAATAGTAATAATACTACTTCTACCTTCGAATAGGGAAAGCACCGCACTA-GCAAACCATACCATCCACCCGCCCTCCTCCTTCAAATCCATTTCTCCATTCTCTCGTCTGTTGTAGTTTGTAGGCCAATTTAGTGTAGTTGTTTCTTCTTTTGCTCAGCATATTAGTAGTTGCGTCGAGCAGTTTTGACCGTTGCCCGAGTACTAAATCACTTCCACAAGGTGGGTTATTCTTGAAAGGT]

[+] EMBL BM617948             [CCGATCTGTTCACCGCGTACCTGCAGCAGACGGACGTGATGAGCATGGCGGCCTCCATCAGCCACTTTTTGAACTGCTTCCTGACGGTGTCGACCGGTGGCTACCAGCCGGTGGCGAACGGTACCGGCGCCGACGGGGACGGCCAGCTGGCGGACGAGTTTGGACCGAAGGCCGGGGGCAAAAAGCAAAACAAACAGAGCAAGCGGGGAGGAGGAGGAGGAGGTGGAAAGGGTGCCGCGGGTGGTGGACGTAAGGCCACCTTTTCCGTGCCCTCGTCCGACAACTGCGAATGGACGGCGCTGACGTCCAAGACGCTGTGGGCACAGATCCGCCAGGAGCTGAAGGCGTACTGGGACTTTGAGCTGACGGTAGAGCAGCCGGCAAAGGAGGGCAAGGAAAGCAAGGCAGCGGTGATCGACTCGATCGAGCCGCTGATCGGTGCGTTCAAGCTGCAGAAAATCTCGCTGCTGCGTTCGTTCTGCCTGAAGACGGGCGTGCAGATTCTGCTGCAGGAGTACGCGTTCGAGCAGCGCAACCGGCCCGCGTTCACCGATGCGGACATCGTGAACGTGTTCCCGGTGGTGAAGCACATCAATCCGCGCGCCTCCGACGCGTACAACTTCTACACGACCGGCCAGACGAAGATCCAGCAGGGCTACCTGCAGGACGGGTACGGGCTGATCAGCGAAGCGCTCAACCTGCTGAACAACGTGTACGGCGCGATGCAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL AGA283423            [                                                                CTTTTTGAACTGCTTCCTGACGGTGTCGACCGGTGGCTACCAGCCGGTGGCGAACGGTACCGGCGCCGACGGGGACGGCCAGCTGGCGGACGAGTTTGGACCGAAGGCCGGGGGCAAAAAGCAAAACAAACAGAGCAAGCGGGGAGGAGGAGGAGGAGGTGGAAAGGGTGCCGCGGGTGGTGGACGTAAGGCCACCTTTTCCGTGCCCTCGTCCGACAACTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL BM615347             [                                                                                                                                                                                                                                                     ccgCGTAAGGCCACCTTTTCCGTGCCCTCGTCCGACAACTGCGAATGGACGGCGCTGACGTCCAAGACGCTGTGGGCACAGATCCGCCAGGAGCTGAAGGCGTACTGGGACTTTGAGCTGACGGTAGAGCAGCCGGCAAAGGAGGGCAAGGAAAGCAAGGCAGCGGTGATCGACTCGATCGAGCCGCTGATCGGTGCGTTCAAGCTGCAGAAAATCTCGCTGCTGCGTTCGTTCTGCCTGAAGACGGGCGTGCAGATTCTGCTGCAGGAGTACGCGTTCGAGCAGCGCAACCGGCCCGCGTTCACCGATGCGGACATCGTGAACGTGTTCCCGGTGGTGAAGCACATCAATCCGCGCGCCTCCGACGCGTACAACTTCTACACGACCGGCCAGACGAAGATCCAGCAGGGCTACCTGCAGGACGGGTACGGGCTGATCAGCGAAGCGCTCAACCTGCTGAACAACGTGTACGGCGCGATGCATCCGGAGAATGCCCAGTGCCTGCGCATGCTGGCCCGGCTCAGCTACATTATGGGCGA TCCGCAGG AAGCGCTCGCGATCCAGCAGCGTG CCGTGCTGATGAGCGAGCGCGT GAACGGGGTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL BM622569             [                                                                                                                                                                                                                                                     ccgCGTAAGGCCACCTTTTCCGTGCCCTCGTCCGACAACTGCGAATGGACGGCGCTGACGTCCAAGACGCTGTGGGCACAGATCCGCCAGGAGCTGAAGGCGTACTGGGACTTTGAGCTGACGGTAGAGCAGCCGGCAAAGGAGGGCAAGGAAAGCAAGGCAGCGGTGATCGACTCGATCGAGCCGCTGATCGGTGCGTTCAAGCTGCAGAAAATCTCGCTGCTGCGTTCGTTCTGCCTGAAGACGGGCGTGCAGATTCTGCTGCAGGAGTACGCGTTCGAGCAGCGCAACCGGCCCGCGTTCACCGATGCGGACATCGTGAACGTGTTCCCGGTGGTGAAGCACATCAATCCGCGCGCCTCCGACGCGTACAACTTCTACACGACCGGCCAGACGAAGATCCAGCAGGGCTACCTGCAGGACGGGTACGGGCTGATCAGCGAAGCGCTCAACCTGCTGAACAACGTGTACGGCGCGATGCATCCGGAGAATGCCCAGTGCCTGCGCATGCTGGCCCGGCTCAGCTACATTATGGGCGATTCCGCAGGAAAGCGCTCGCGATCCAGCAGCGTGCCCGTGCTGATGAGCGAGCGCGTGGAACGGGGTCGACCATCCGTACACGATTTTCGGAATATGGCCACCTTGCATTTGTACTGTTTTGCCAACAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL BM655843             [                                                                                                                                                                                                                                                                                                      ccGCGCTGACGTCCAAGACGCTGTGGGCACAGATCCGCCAGGAGCTGAAGGCGTACTGGGACTTTGAGCTGACGGTAGAGCAGCCGGCAAAGGAGGGCAAGGAAAGCAAGGCAGCGGTGATCGACTCGATCGAGCCGCTGATCGGTGCGTTCAAGCTGCAGAAAATCTCGCTGCTGCGTTCGTTCTGCCTGAAGACGGGCGTGCAGATTCTGCTGCAGGAGTACGCGTTCGAGCAGCGCAACCGGCCCGCGTTCACCGATGCGGACATCGTGAACGTGTTCCCGGTGGTGAAGCACATCAATCCGCGCGCCTCCGACGCGTACAACTTCTACACGACCGGCCAGACGAAGATCCAGCAGGGCTACCTGCAGGACGGGTACGGGCTGATCAGCGAAGCGCTCAACCTGCTGAACAACGTGTACGGCGCGATGCATCCGGAGAATGCCCAGTGCCTGCGCATGCTGGCCCGGCTCAGCTACATTATGGGCGA TCCGCAGG AAGCGCTCGCGATCCAGCAGCGTG CCGTGCTGATGAGCGAGCGCGT GAACGGGGTCGACCATCCGTACACGA TTTCGGAATATGGCCACCTTGCA TTGTACTGTTTTGCCAACAGTCAAATCACCACCGCACTTAAGCTGCTGTACCGTGCCCCGGTATCTGGCGACCATCGTGTGCGGCGAGAACCATTCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CNS08WGY             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   atcTCCAGCAGCGTG CCGTGATGATGAGCGAGCGCGT GAACGGGGTCGACCATCCGTACACGA TTTCGGAATATGGCCACCTTGCA TTGTACTGTTTTGCCAACAGTCAAATCACCACCGCACTTAAGCTGCTGTACCGTG CCCGGTATCTGGCGACCATCGTGTGCGGCGAGAACCATCCCGACATTGCGCTGATGGATAGCAACATCAGCTTGATCCTGCACGCAGTCGGTGAGTACGAACTGTCGCTGCGCTTCCTGGAGCACGCGCTCGCCCTCAACATTCGGTACTACGGCGAAAAGTCGCTCAAGGTGGCAGTTAGCTACCATCTAGTGGCGCGAACGCAAAGCTGCATGGGCGACTTCCGATCCGCGTTGGTCAACGAAAAGGAAACGTACGCTATCTACAAACAGCAGCTCGGTGAAAACCATGAAAAGACGCAGGAATCCTCCGAATGCCTTCGCCACCTGACGCAGCAGGCGGTCGTGCTGCAGAAGAAGATGAACTACGCCAACGGCAAGCTGCTGAGCACCGGGTTGCCCCCGATTCACATTCAGCCAC CCTCGATGGGCTCGGTGCTGGACATGCTGAATGCAATCAATGGCATCATTTTTGTACAAATTAGTTCCAAAGAGATTGCCAACTTCAAGAACGAAATCGAAAAGCGCCAGAAGGAGGCGGGCGCCCAGTCGCAACAGCCCGGCGGTGGTCCGGTGCAAGCCAACCAGGAGGAAGTCGATCAGATGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL BM639300             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ccgGCCAACAGTCAAATCACCACCGCACTTAAGCTGCTGTACCGTG CCCGGTATCTGGCGACCATCGTGTGCGGTGAGAACCATCCCGACATTGCGCTGATGGATAGCAACATCAGTTTGATCCTGCACGCGGTCGGCGAGTACGAACTGTCGCTGCGCTTCCTGGAGCACGCGCTCGCCCTCAACATTCGGTACTACGGCGAAAAGTCGCTTAAGGTGGCAGTTAGCTACCATCTAGTGGCGCGAACGCAAAGCTGCATGGGCGACTTCCGATCCGCGCTGGTCAACGAAAAGGAAACGTATGCCATCTACAAACAGCAGCTCGGTGAAAACCATGAAAAGACGCAGGAATCCTCCGAATGCCTTCGCCATCTGACGCAGCAAGCGGTCGTGCTGCAGAAGAAGATGAACTACGCCAACGGCAAGCTGCTGAGCACCGGGTTGCCCCCGATTCACATTCAGCCAC CCTCGATGGGCTCGGTGCTGGACATGCTGAATGCAATCAATGGCATCATTTTTGTACAAATTAGTTCCAAAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL AGA284717            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      GAGCACCGGGTTGCCCCGGATTCACATTCAGCCAC CCTCGATGGGCTCGGTGCTGGACATGCTGAATGCAATCAATGGCATCATTTTTGTACAAATTAGTTCCAAAGAGATTGCCAACTTCAAGAACGAAATCGAAAAGCGCCAGAAGGAGGCGGGCGCCCAGTCGCAACAGCCCGGCGGTGGTCCGGTGCAAGCCAACCAGGAGGAAGTCGATCAGATGCTGATGGAAACGATGCAAAAGACGGCCGCCGGCATTCCGTTCGAGGAGCAGGATGGCGAGAAGAAGGACGGTGCGGCGGTAGAGAAGAAGCCCGCCGAGGTGACGTCGAGTTGAAGCCGATGCACCACGATGATGCGGTAACGGTCGCCGCTGCTGCAGCTGCGGTTTGCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL BM595165             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ccgcCCACGCGTCCGTGGGCTCGGTGCTGGACATGCTGAATGCAATCAATGGCATCATTTTTGTACAAATTAGTTCCAAAGAGATTGCCAACTTCAAGAACGAAATCGAAAAGCGCCAGAAGGAGGCGGGCGCCCAGTCGCAACAGCCCGGCGGTGGTCCGGTGCAAGCCAACCAGGAGGAAGTTGATCAGATGCTGATGGAAACGATGCAAAAGACGGCCGCCGGCATTCCGTTCGAGGAGCAGGATGGCGAGAAGAAGGACGGTGCGGCGGTAGAGAAGAAGCCCGCCGAGGTGACGTCGAGTTGAAGCCGATGCACCACGATGATGCGGTAACGGTCGCCGCTGCTGCAGCTGCGGTTTGCCTTGGGTCGCCAAAAATGATGGGACAGCTGTGGAGGACGCCCGCTGCCGTGCAGAACACACACACACACACACATACACAGTGGAAAGCCAGTTCACTAATGGAGAAGAATTTGTGGTAGAATAGTTTTCGATTTGGATACGTTTTACTGTCTTTGTTTTGGCGCCGCGCGGTGACAATACGCCCCGCGTGGTGTTTAGTGCTAAGCAGCGTGTATGCTGTGCCTTTTCTTTTTCTTCTTCAATAGTAATAATACTACTTCTACCTTCGAATAGGGAAAGCACCGCACTA GCAAACCATACC                                                                                                                                                                                  ]
[+] EMBL AL930514             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         cccggctATGGAGAAGAATTTGTGGTAGAATAGTTTTCGATTTGGATACGTTTTACTGTC TTG TTTGGCGCCGCGCGGTGACAATACGCCCCGCGTGGTGTTTAGTGCTAAGCAGCGTGTACGCTGTGCCTTTTCTTTTTCTTCTTCAATAGTAATAATACTACTTCTACCTTCGAATAGGGAAAGCACCGCACTAGGCAAACCATACCATCCACCCGCCCTCCTCCTTCAAATCCATTTCTCCATTCTCTCGTCTGTTGTAGTTTGTAGGCCAATTTAGTGTAGTTGTTTCTTCTTTTGCTCAGCATATTAGTAGTTGCGTCGAGCAGTTTTGACCGTTGCCCGAGTACTAAATCACTTCCACAAGGTGGGTTATTCTTGAAAGGT]




>consensus_9038#0
CCGATCTGTTCACCGCGTACCTGCAGCAGACGGACGTGATGAGCATGGCGGCCTCCATCA
GCCACTTTTTGAACTGCTTCCTGACGGTGTCGACCGGTGGCTACCAGCCGGTGGCGAACG
GTACCGGCGCCGACGGGGACGGCCAGCTGGCGGACGAGTTTGGACCGAAGGCCGGGGGCA
AAAAGCAAAACAAACAGAGCAAGCGGGGAGGAGGAGGAGGAGGTGGAAAGGGTGCCGCGG
GTGGTGGACGTAAGGCCACCTTTTCCGTGCCCTCGTCCGACAACTGCGAATGGACGGCGC
TGACGTCCAAGACGCTGTGGGCACAGATCCGCCAGGAGCTGAAGGCGTACTGGGACTTTG
AGCTGACGGTAGAGCAGCCGGCAAAGGAGGGCAAGGAAAGCAAGGCAGCGGTGATCGACT
CGATCGAGCCGCTGATCGGTGCGTTCAAGCTGCAGAAAATCTCGCTGCTGCGTTCGTTCT
GCCTGAAGACGGGCGTGCAGATTCTGCTGCAGGAGTACGCGTTCGAGCAGCGCAACCGGC
CCGCGTTCACCGATGCGGACATCGTGAACGTGTTCCCGGTGGTGAAGCACATCAATCCGC
GCGCCTCCGACGCGTACAACTTCTACACGACCGGCCAGACGAAGATCCAGCAGGGCTACC
TGCAGGACGGGTACGGGCTGATCAGCGAAGCGCTCAACCTGCTGAACAACGTGTACGGCG
CGATGCATCCGGAGAATGCCCAGTGCCTGCGCATGCTGGCCCGGCTCAGCTACATTATGG
GCGATCCGCAGGAAGCGCTCGCGATCCAGCAGCGTGCCGTGCTGATGAGCGAGCGCGTGA
ACGGGGTCGACCATCCGTACACGATTTCGGAATATGGCCACCTTGCATTGTACTGTTTTG
CCAACAGTCAAATCACCACCGCACTTAAGCTGCTGTACCGTGCCCGGTATCTGGCGACCA
TCGTGTGCGGCGAGAACCATCCCGACATTGCGCTGATGGATAGCAACATCAGCTTGATCC
TGCACGCAGTCGGTGAGTACGAACTGTCGCTGCGCTTCCTGGAGCACGCGCTCGCCCTCA
ACATTCGGTACTACGGCGAAAAGTCGCTCAAGGTGGCAGTTAGCTACCATCTAGTGGCGC
GAACGCAAAGCTGCATGGGCGACTTCCGATCCGCGTTGGTCAACGAAAAGGAAACGTACG
CTATCTACAAACAGCAGCTCGGTGAAAACCATGAAAAGACGCAGGAATCCTCCGAATGCC
TTCGCCACCTGACGCAGCAGGCGGTCGTGCTGCAGAAGAAGATGAACTACGCCAACGGCA
AGCTGCTGAGCACCGGGTTGCCCCCGATTCACATTCAGCCACCCTCGATGGGCTCGGTGC
TGGACATGCTGAATGCAATCAATGGCATCATTTTTGTACAAATTAGTTCCAAAGAGATTG
CCAACTTCAAGAACGAAATCGAAAAGCGCCAGAAGGAGGCGGGCGCCCAGTCGCAACAGC
CCGGCGGTGGTCCGGTGCAAGCCAACCAGGAGGAAGTCGATCAGATGCTGATGGAAACGA
TGCAAAAGACGGCCGCCGGCATTCCGTTCGAGGAGCAGGATGGCGAGAAGAAGGACGGTG
CGGCGGTAGAGAAGAAGCCCGCCGAGGTGACGTCGAGTTGAAGCCGATGCACCACGATGA
TGCGGTAACGGTCGCCGCTGCTGCAGCTGCGGTTTGCCTTGGGTCGCCAAAAATGATGGG
ACAGCTGTGGAGGACGCCCGCTGCCGTGCAGAACACACACACACACACACATACACAGTG
GAAAGCCAGTTCACTAATGGAGAAGAATTTGTGGTAGAATAGTTTTCGATTTGGATACGT
TTTACTGTCTTTGTTTTGGCGCCGCGCGGTGACAATACGCCCCGCGTGGTGTTTAGTGCT
AAGCAGCGTGTATGCTGTGCCTTTTCTTTTTCTTCTTCAATAGTAATAATACTACTTCTA
CCTTCGAATAGGGAAAGCACCGCACTAGCAAACCATACCATCCACCCGCCCTCCTCCTTC
AAATCCATTTCTCCATTCTCTCGTCTGTTGTAGTTTGTAGGCCAATTTAGTGTAGTTGTT
TCTTCTTTTGCTCAGCATATTAGTAGTTGCGTCGAGCAGTTTTGACCGTTGCCCGAGTAC
TAAATCACTTCCACAAGGTGGGTTATTCTTGAAAGGT

consensusID : consensus_9038#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 784
fasta sequence

                              [GATCCCCGAGGTTATTTGTGGTAGAACTAGTTATCGATTTGGATACGNTTTTACTGTCTTTGTAAATGGCGCCGCGCGGTGACAATACGCCCCGACGTGGTGTTTAGTGCTAAGCAGCGTGTACGCTGTGCCTATTATCTATTNTTCTATCTTCAATAGTAATAATACTACTTCTACCTATCGAATAGGGAAAGCACCGCACTAGTGCAAACCATACCATCCACCCGCCCTCCTACCTTACAAATACCATATTCTCCATTACTCTCGTACTGTNTGTAAGTTTTGTAGGCCAATTTAGGTGTAAGTATAGTTTAAAATATNTCNNNGCTCAGCATATTAGTAGTTTGCGTCGAAGAGTNTTATGACCGTTGCCCGAGCTACTTAAATACACTTCCACAAGGTGTGTATATTACTTGNAAAGGTGGGGTGCAATGTGTTCTNGCTCATGATATGCGTGTCGCATCGTAGGTTGTTAAAGCGTATGCAGTATTTCAACAGCCGTGTACTATCAGTACTAAAGTCCNGTATTCTCTATCTATACTTCTCCCCTACGCTTAAGATAGTCTACTGGTAATCATGCCTTTTGTGTGGTGTANCACGAGGAGCAGAGGACGCANCAGCAGACGCGACGCATGCTTCCAAGGCCCGCGNAGAGACGAGGCAATTGACACGCTTTATTATCCGTCACCAACAAAACAAACAANATCGGTCAGGGGTATACCTTACGCCGAAATCATCGGACAGGAGAGTGACAGAACCCCTCACTAGTGNACGACAACAGGTG]

[+] EMBL AL933255             [GATCCCCGAGGTTATTTGTGGTAGAACTAGTTATCGATTTGGATACGNTTTTACTGTCTTTGTAAATGGCGCCGCGCGGTGACAATACGCCCCGACGTGGTGTTTAGTGCTAAGCAGCGTGTACGCTGTGCCTATTATCTATTNTTCTATCTTCAATAGTAATAATACTACTTCTACCTATCGAATAGGGAAAGCACCGCACTAGTGCAAACCATACCATCCACCCGCCCTCCTACCTTACAAATACCATATTCTCCATTACTCTCGTACTGTNTGTAAGTTTTGTAGGCCAATTTAGGTGTAAGTATAGTTTAAAATATNTCNNNGCTCAGCATATTAGTAGTTTGCGTCGAAGAGTNTTATGACCGTTGCCCGAGCTACTTAAATACACTTCCACAAGGTGTGTATATTACTTGNAAAGGTGGGGTGCAATGTGTTCTNGCTCATGATATGCGTGTCGCATCGTAGGTTGTTAAAGCGTATGCAGTATTTCAACAGCCGTGTACTATCAGTACTAAAGTCCNGTATTCTCTATCTATACTTCTCCCCTACGCTTAAGATAGTCTACTGGTAATCATGCCTTTTGTGTGGTGTANCACGAGGAGCAGAGGACGCANCAGCAGACGCGACGCATGCTTCCAAGGCCCGCGNAGAGACGAGGCAATTGACACGCTTTATTATCCGTCACCAACAAAACAAACAANATCGGTCAGGGGTATACCTTACGCCGAAATCATCGGACAGGAGAGTGACAGAACCCCTCACTAGTGNACGACAACAGGTG]




>consensus_9038#1
GATCCCCGAGGTTATTTGTGGTAGAACTAGTTATCGATTTGGATACGNTTTTACTGTCTT
TGTAAATGGCGCCGCGCGGTGACAATACGCCCCGACGTGGTGTTTAGTGCTAAGCAGCGT
GTACGCTGTGCCTATTATCTATTNTTCTATCTTCAATAGTAATAATACTACTTCTACCTA
TCGAATAGGGAAAGCACCGCACTAGTGCAAACCATACCATCCACCCGCCCTCCTACCTTA
CAAATACCATATTCTCCATTACTCTCGTACTGTNTGTAAGTTTTGTAGGCCAATTTAGGT
GTAAGTATAGTTTAAAATATNTCNNNGCTCAGCATATTAGTAGTTTGCGTCGAAGAGTNT
TATGACCGTTGCCCGAGCTACTTAAATACACTTCCACAAGGTGTGTATATTACTTGNAAA
GGTGGGGTGCAATGTGTTCTNGCTCATGATATGCGTGTCGCATCGTAGGTTGTTAAAGCG
TATGCAGTATTTCAACAGCCGTGTACTATCAGTACTAAAGTCCNGTATTCTCTATCTATA
CTTCTCCCCTACGCTTAAGATAGTCTACTGGTAATCATGCCTTTTGTGTGGTGTANCACG
AGGAGCAGAGGACGCANCAGCAGACGCGACGCATGCTTCCAAGGCCCGCGNAGAGACGAG
GCAATTGACACGCTTTATTATCCGTCACCAACAAAACAAACAANATCGGTCAGGGGTATA
CCTTACGCCGAAATCATCGGACAGGAGAGTGACAGAACCCCTCACTAGTGNACGACAACA
GGTG

consensusID : consensus_9038#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 650
fasta sequence

                              [CCGCGGACGCGTGGGCGCGCTCGCCCTCAACATTCGGTACTACGGCGAAAAGTCGCTTAAGGTGGCAGTTAGCTACCATCTAGTGGCGCGTACGCAAAGTTGCATGGGCGACTTCCGATCCGCGCTGGTCAACGAAAAGGAAACGTACGCCATCTACAAACAGCAGCTCGGCGAAAACCATGAAAAGACGCAGGAATCCTCCGAATGCCTTCGCCACCTGACGCAGCAGGCGGTCGTGCTG-CAGAAGAAGATGAACTACGCCAACGGCAAGCTGCTGAGCACCGGGTTGCCCCCGATTCACATTCAGCCACCCTCGATGGGCTCGGTGCTGGACATGCTGAATGCAATCAATGGCATCATTTTTGTACAAATTAGTTCCAAAGAGATTGCCAACTTCAAGAACGAAATCGAAAAGCGCCAGAAAGGAGGCGGGCGCCCAGTCGCAACAGCCCGGCGGTGGTCCGGTGCAAGCCAACCAGGAGGAAGTCGATCAGATGCTGATGGAAACGATGCAAAAGACGGCCGCCGGCATTCCGTTCGAGGAGCAGGATGGCGAGAAGAAGGACGGTGCGGCGGTAGAGAAGAAGCCCGCCGAGGTGACGTCGAGTTGAAGCCAATGCACCACGATGATGCGGTAACGGTCGCCGCTG]

[+] EMBL BM575751             [CCGCGGACGCGTGGGCGCGCTCGCCCTCAACATTCGGTACTACGGCGAAAAGTCGCTTAAGGTGGCAGTTAGCTACCATCTAGTGGCGCGTACGCAAAGTTGCATGGGCGACTTCCGATCCGCGCTGGTCAACGAAAAGGAAACGTACGCCATCTACAAACAGCAGCTCGGCGAAAACCATGAAAAGACGCAGGAATCCTCCGAATGCCTTCGCCACCTGACGCAGCAGGCGGTCGTGCTG CAGAAGAAGATGAACTACGCCAACGGCAAGCTGCTGAGCACCGGGTTGCCCCCGATTCACATTCAGCCACCCTCGATGGGCTCGGTGCTGGACATGCTGAATGCAATCAATGGCATCATTTTTGTACAAATTAGTTCCAAAGAGATTGCCAACTTCAAGAACGAAATCGAAAAGCGCCAGAAAGGAGGCGGGCGCCCAGTCGCAACAGCCCGGCGGTGGTCCGGTGCAAGCCAACCAGGAGGAAGTCGATCAGATGCTGATGGAAACGATGCAAAAGACGGCCGCCGGCATTCCGTTCGAGGAGCAGGATGGCGAGAAGAAGGACGGTGCGGCGGTAGAGAAGAAGCCCGCCGAGGTGACGTCGAGTTGAAGCCAATGCACCACGATGATGCGGTAACGGTCGCCGCTG]
[+] EMBL BM612183             [                                                                                                                                                                         GGCGAAAACCATGAAAAGACGCAGGAATCCTCCGAATGCCTTCGCCACCTGACGCAGAAGGCGGTCGTGCTGTTTTAAGAAGATGAACTACGCCAACGGCAAGCTGCTGAGCACCGGGTTGCCCCCGATTCACATTCAGCCACCCTCGATGGGCT                                                                                                                                                                                                                                                                                                                                       ]




>consensus_9038#2
CCGCGGACGCGTGGGCGCGCTCGCCCTCAACATTCGGTACTACGGCGAAAAGTCGCTTAA
GGTGGCAGTTAGCTACCATCTAGTGGCGCGTACGCAAAGTTGCATGGGCGACTTCCGATC
CGCGCTGGTCAACGAAAAGGAAACGTACGCCATCTACAAACAGCAGCTCGGCGAAAACCA
TGAAAAGACGCAGGAATCCTCCGAATGCCTTCGCCACCTGACGCAGCAGGCGGTCGTGCT
GCAGAAGAAGATGAACTACGCCAACGGCAAGCTGCTGAGCACCGGGTTGCCCCCGATTCA
CATTCAGCCACCCTCGATGGGCTCGGTGCTGGACATGCTGAATGCAATCAATGGCATCAT
TTTTGTACAAATTAGTTCCAAAGAGATTGCCAACTTCAAGAACGAAATCGAAAAGCGCCA
GAAAGGAGGCGGGCGCCCAGTCGCAACAGCCCGGCGGTGGTCCGGTGCAAGCCAACCAGG
AGGAAGTCGATCAGATGCTGATGGAAACGATGCAAAAGACGGCCGCCGGCATTCCGTTCG
AGGAGCAGGATGGCGAGAAGAAGGACGGTGCGGCGGTAGAGAAGAAGCCCGCCGAGGTGA
CGTCGAGTTGAAGCCAATGCACCACGATGATGCGGTAACGGTCGCCGCTG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9038#0      CCGATCTGTTCACCGCGTACCTGCAGCAGACGGACGTGATGAGCATGGCGGCCTCCATCA 60
consensus_9038#2      ------------------------------------------------------------
consensus_9038#1      ------------------------------------------------------------
                                                                                  

consensus_9038#0      GCCACTTTTTGAACTGCTTCCTGACGGTGTCGACCGGTGGCTACCAGCCGGTGGCGAACG 120
consensus_9038#2      ------------------------------------------------------------
consensus_9038#1      ------------------------------------------------------------
                                                                                  

consensus_9038#0      GTACCGGCGCCGACGGGGACGGCCAGCTGGCGGACGAGTTTGGACCGAAGGCCGGGGGCA 180
consensus_9038#2      ------------------------------------------------------------
consensus_9038#1      ------------------------------------------------------------
                                                                                  

consensus_9038#0      AAAAGCAAAACAAACAGAGCAAGCGGGGAGGAGGAGGAGGAGGTGGAAAGGGTGCCGCGG 240
consensus_9038#2      ------------------------------------------------------------
consensus_9038#1      ------------------------------------------------------------
                                                                                  

consensus_9038#0      GTGGTGGACGTAAGGCCACCTTTTCCGTGCCCTCGTCCGACAACTGCGAATGGACGGCGC 300
consensus_9038#2      ------------------------------------------------------------
consensus_9038#1      ------------------------------------------------------------
                                                                                  

consensus_9038#0      TGACGTCCAAGACGCTGTGGGCACAGATCCGCCAGGAGCTGAAGGCGTACTGGGACTTTG 360
consensus_9038#2      ------------------------------------------------------------
consensus_9038#1      ------------------------------------------------------------
                                                                                  

consensus_9038#0      AGCTGACGGTAGAGCAGCCGGCAAAGGAGGGCAAGGAAAGCAAGGCAGCGGTGATCGACT 420
consensus_9038#2      ------------------------------------------------------------
consensus_9038#1      ------------------------------------------------------------
                                                                                  

consensus_9038#0      CGATCGAGCCGCTGATCGGTGCGTTCAAGCTGCAGAAAATCTCGCTGCTGCGTTCGTTCT 480
consensus_9038#2      ------------------------------------------------------------
consensus_9038#1      ------------------------------------------------------------
                                                                                  

consensus_9038#0      GCCTGAAGACGGGCGTGCAGATTCTGCTGCAGGAGTACGCGTTCGAGCAGCGCAACCGGC 540
consensus_9038#2      ------------------------------------------------------------
consensus_9038#1      ------------------------------------------------------------
                                                                                  

consensus_9038#0      CCGCGTTCACCGATGCGGACATCGTGAACGTGTTCCCGGTGGTGAAGCACATCAATCCGC 600
consensus_9038#2      ------------------------------------------------------------
consensus_9038#1      ------------------------------------------------------------
                                                                                  

consensus_9038#0      GCGCCTCCGACGCGTACAACTTCTACACGACCGGCCAGACGAAGATCCAGCAGGGCTACC 660
consensus_9038#2      ------------------------------------------------------------
consensus_9038#1      ------------------------------------------------------------
                                                                                  

consensus_9038#0      TGCAGGACGGGTACGGGCTGATCAGCGAAGCGCTCAACCTGCTGAACAACGTGTACGGCG 720
consensus_9038#2      ------------------------------------------------------------
consensus_9038#1      ------------------------------------------------------------
                                                                                  

consensus_9038#0      CGATGCATCCGGAGAATGCCCAGTGCCTGCGCATGCTGGCCCGGCTCAGCTACATTATGG 780
consensus_9038#2      ------------------------------------------------------------
consensus_9038#1      ------------------------------------------------------------
                                                                                  

consensus_9038#0      GCGATCCGCAGGAAGCGCTCGCGATCCAGCAGCGTGCCGTGCTGATGAGCGAGCGCGTGA 840
consensus_9038#2      ------------------------------------------------------------
consensus_9038#1      ------------------------------------------------------------
                                                                                  

consensus_9038#0      ACGGGGTCGACCATCCGTACACGATTTCGGAATATGGCCACCTTGCATTGTACTGTTTTG 900
consensus_9038#2      ------------------------------------------------------------
consensus_9038#1      ------------------------------------------------------------
                                                                                  

consensus_9038#0      CCAACAGTCAAATCACCACCGCACTTAAGCTGCTGTACCGTGCCCGGTATCTGGCGACCA 960
consensus_9038#2      ------------------------------------------------------------
consensus_9038#1      ------------------------------------------------------------
                                                                                  

consensus_9038#0      TCGTGTGCGGCGAGAACCATCCCGACATTGCGCTGATGGATAGCAACATCAGCTTGATCC 1020
consensus_9038#2      ------------------------------------------------------------
consensus_9038#1      ------------------------------------------------------------
                                                                                  

consensus_9038#0      TGCACGCAGTCGGTGAGTACGAACTGTCGCTGCGCTT--CCTGGAGCACGCGCTCGCCCT 1078
consensus_9038#2      -------------------------------CCGCGG--ACGCGTGGGCGCGCTCGCCCT 27
consensus_9038#1      --------------------------GATCCCCGAGGTTATTTGTGGTAGAACTAGTTAT 34
                                                      **         * *   *  ** *   *

consensus_9038#0      CAAC----ATTCGGTACTACGGCG-----AAAAGTCGCT-CAAGGTGGCAGTTAGCTACC 1128
consensus_9038#2      CAAC----ATTCGGTACTACGGCG-----AAAAGTCGCT-TAAGGTGGCAGTTAGCTACC 77
consensus_9038#1      CGATTTGGATACGNTTTTACTGTCTTTGTAAATGGCGCCGCGCGGTGACAATACGCCCCG 94
                      * *     ** ** *  *** *       *** * ***     **** ** *  **  * 

consensus_9038#0      ATCTAGTGGCGCGAACGCAAAGCTGCATGGGCGACTTCCGATCCGCGTTGGTCAACG--- 1185
consensus_9038#2      ATCTAGTGGCGCGTACGCAAAGTTGCATGGGCGACTTCCGATCCGCGCTGGTCAACG--- 134
consensus_9038#1      ACGTGGTGTTTAGTGCTAAGCAGCGTGTACGCTGTGCCTATTATCTATTNTTCTATCTTC 154
                      *  * ***    *  *  *     *  *  **     *   *      *  ** *     

consensus_9038#0      AAAAGGAAACGTACGCTATCTACAAACAGCAGCTCGGTGAAAACCATGAAAAGACGCAGG 1245
consensus_9038#2      AAAAGGAAACGTACGCCATCTACAAACAGCAGCTCGGCGAAAACCATGAAAAGACGCAGG 194
consensus_9038#1      AATAGTAATAATACTACTTCTACCTATCG-AATAGGGAAAGCACCGCACTAGTGCAAACC 213
                      ** ** **   ***    *****  *  * *    **  *  ***     *   *  *  

consensus_9038#0      A-ATCCTCCGAATGCCTTCGCCACCTGACG--CAGCAGG----------CGGTCGTGCTG 1292
consensus_9038#2      A-ATCCTCCGAATGCCTTCGCCACCTGACG--CAGCAGG----------CGGTCGTGCTG 241
consensus_9038#1      ATACCATCCACCCGCCCTC-CTACCTTACAAATACCATATTCTCCATTACTCTCGTACTG 272
                      * * * ***    *** ** * **** **    * **            *  **** ***

consensus_9038#0      CAGAAGAAG---ATGAACTACGCCAACGGCAAGCT--GCTGAGCACCGGGTTGCCCCCGA 1347
consensus_9038#2      CAGAAGAAG---ATGAACTACGCCAACGGCAAGCT--GCTGAGCACCGGGTTGCCCCCGA 296
consensus_9038#1      TNTGTAAGTTTTGTAGGCCAATTTAGGTGTAAGTATAGTTTAAAATATNTCNNNGCTCAG 332
                            *      *   * *    *   * ***    * * *  *          * *  

consensus_9038#0      TTCACATTCAGCCACCCTCGATGGGCTCGGTG----CTGGACATGCTGAATGCAATCAAT 1403
consensus_9038#2      TTCACATTCAGCCACCCTCGATGGGCTCGGTG----CTGGACATGCTGAATGCAATCAAT 352
consensus_9038#1      CATATTAGTAGTTTGCGTCGAAGAGTNTTATGACCGTTGCCCGAGCTACTTAAATACACT 392
                         *     **    * **** * *     **     **  *  ***   *  *  ** *

consensus_9038#0      GGCATCATTTTTGTACAAATTAGTTCCAAAGA--GATTGCCAACTTCAAGAACGAAATCG 1461
consensus_9038#2      GGCATCATTTTTGTACAAATTAGTTCCAAAGA--GATTGCCAACTTCAAGAACGAAATCG 410
consensus_9038#1      TCCACAAGGTGTGTAT--ATTACTTGNAAAGGTGGGGTGCAATGTGTTCTNGCTCATGAT 450
                        **  *  * ****   **** **  ****   *  *** *  *       *  *    

consensus_9038#0      AAAAGCGCCAGAA-GGAGGCGGGCGCCCAGT-CGCAACAGCCCGGCGGTGGTCCGGTGCA 1519
consensus_9038#2      AAAAGCGCCAGAAAGGAGGCGGGCGCCCAGT-CGCAACAGCCCGGCGGTGGTCCGGTGCA 469
consensus_9038#1      ATGCGTGTCGCATCGTAGGTTGTTAAAGCGTATGCAGTATTTCAACAGCCGTGTACTATC 510
                      *   * * *  *  * ***  *       **  ***  *   *  * *  **    *   

consensus_9038#0      AGCCAACCAGGAGGAAGTCGATCAGATGCTGATGGAAACGATGCAAAAGACGGCC-GCCG 1578
consensus_9038#2      AGCCAACCAGGAGGAAGTCGATCAGATGCTGATGGAAACGATGCAAAAGACGGCC-GCCG 528
consensus_9038#1      AGTACTAAAGTCCNGTATTCTCTATCTATACTTCTCCCCTACGCTTAAGATAGTCTACTG 570
                      **      **       *     *  *     *     * * **  ****  * *  * *

consensus_9038#0      GCATTC-CGTTCGAGGAGCAGGATGGCGAGAAGAA-GGACGGTGCGGCGGTAGAGAAGAA 1636
consensus_9038#2      GCATTC-CGTTCGAGGAGCAGGATGGCGAGAAGAA-GGACGGTGCGGCGGTAGAGAAGAA 586
consensus_9038#1      GTAATCATGCCTTTTGTGTGGTGTANCACGAGGAGCAGAGGACGCANCAGCAGACGCGAC 630
                      * * **  *      * *  *  *  *  ** **   ** *  **  * * ***   ** 

consensus_9038#0      GCCCGCCGAGGTGACGTCGAGTTGAAGCCGATGCACCACGATGATGCGGTAACGGTCGCC 1696
consensus_9038#2      GCCCGCCGAGGTGACGTCGAGTTGAAGCCAATGCACCACGATGATGCGGTAACGGTCGCC 646
consensus_9038#1      GCATGCTTCCAAGGC-CCGCGNAGAGACGAGGCAATTGACACGCTTTATTATCCGTCACC 689
                      **  **      * *  ** *  **  *      *     * * *    ** * *** **

consensus_9038#0      GCTGCTGCAGCTGCGGTTTGCCTTGGGTCGCCAAAAATGATGGGACAGCTGTGGAGGACG 1756
consensus_9038#2      GCTG-------------------------------------------------------- 650
consensus_9038#1      AACAAAACAAACAANATCGGTCAGGGGTATACCTTACGCCGAAATCATCGGACAGGAGAG 749
                                                                                  

consensus_9038#0      CCCGCTGCCGTGCAGAACACACACACACACACACATACACAGTGGAAAGCCAGTTCACTA 1816
consensus_9038#2      ------------------------------------------------------------
consensus_9038#1      TGACAGAACCCCTCACTAGTGNACGACAACAGGTG------------------------- 784
                                                                                  

consensus_9038#0      ATGGAGAAGAATTTGTGGTAGAATAGTTTTCGATTTGGATACGTTTTACTGTCTTTGTTT 1876
consensus_9038#2      ------------------------------------------------------------
consensus_9038#1      ------------------------------------------------------------
                                                                                  

consensus_9038#0      TGGCGCCGCGCGGTGACAATACGCCCCGCGTGGTGTTTAGTGCTAAGCAGCGTGTATGCT 1936
consensus_9038#2      ------------------------------------------------------------
consensus_9038#1      ------------------------------------------------------------
                                                                                  

consensus_9038#0      GTGCCTTTTCTTTTTCTTCTTCAATAGTAATAATACTACTTCTACCTTCGAATAGGGAAA 1996
consensus_9038#2      ------------------------------------------------------------
consensus_9038#1      ------------------------------------------------------------
                                                                                  

consensus_9038#0      GCACCGCACTAGCAAACCATACCATCCACCCGCCCTCCTCCTTCAAATCCATTTCTCCAT 2056
consensus_9038#2      ------------------------------------------------------------
consensus_9038#1      ------------------------------------------------------------
                                                                                  

consensus_9038#0      TCTCTCGTCTGTTGTAGTTTGTAGGCCAATTTAGTGTAGTTGTTTCTTCTTTTGCTCAGC 2116
consensus_9038#2      ------------------------------------------------------------
consensus_9038#1      ------------------------------------------------------------
                                                                                  

consensus_9038#0      ATATTAGTAGTTGCGTCGAGCAGTTTTGACCGTTGCCCGAGTACTAAATCACTTCCACAA 2176
consensus_9038#2      ------------------------------------------------------------
consensus_9038#1      ------------------------------------------------------------
                                                                                  

consensus_9038#0      GGTGGGTTATTCTTGAAAGGT 2197
consensus_9038#2      ---------------------
consensus_9038#1      ---------------------