These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9064#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 1169 fasta sequence [AAGAAAATGTTGCTGCCGCGAAGCGATCGCTCCTGTTGCAGCTAAAAACTGAAAACAAACCCAATAAACTAGGCGAATCTCGGTTAATAGTACACCAAAATGGCAGACGATTTGCAGAATTACAAGCTGCAACTACAGCAGGTCGAAGCTGCCCTGCTTACAGATCCGGAGAACTCGGAACTGCTCAAGCTGAAGGAGGAC-CTGAACGAGGTGATCGAACTGACGAAGGATCTGATCAAGGCGCAGCAGGAACCGGAACAGAAAAAGTCGTCGTACATTGAGCCGGCCACCAGCAGCTACTACGAGGGCGTCTCGGGAGCGGACAAGAAGCAGCCGAAGCCAGCGAAGGTATGGAAGGTGGGTGATAAATGTTCTGCTAAGTGGATTGAAGACGGTCAGTACTATGATGCTACCATAGAGTCGATCTCGGAAACGGGCGAGGTGAACATCGTGTTTGAGGCGTACCAGAACCGGAGCAACACCACGATTAGTGAGCTGAAGGAGCCAAAGACAC-GGAACGAGGTGTTTCCCGCCAACAGTAACAAACGCATGCG-GCACAATCAGAAAGAATACCTGAAGAAAAAGAAGATGAAAAAAATCCAGCGATTCAAGGAGCTGGAGGAGGAACGGGAATGCGAGAAGAACAAATGGCTTCAGTTTACCGCCAAATCATCGAAAAAGTCCGGTGGCGTGAAACCGAAGAGTATTTTTGCTTCGCCCGAAAATGTGAACGGCCGGGTCGGTATCGGTACCTGCGGTGTGTCCGGCAAACCGATGACGGAGTTTTCACACGGAGAAAAGTACAGGAAAGGTGTTTAGGGA-CGCTTTTGCTGGCACGAACGAGTGCTGGGGCTGAGAGCTTGAGTGCTCCACACGAATCGTTCTGCTTCTTTTTTCAATCGAAGTAAATTCTTGATATGGCTTAGAAATTAAGATTACTGCACACACATACACACACACACACGCACATAGGCTTGTGTGCAGTTTGTCTTCACCTTTTTACCTAATCATTTTACACAGTGAAATGATCCGTCTTTGCCATCGCAGTTCCGGCAGAAACCCGTTTTTGCTGGTGAAGGATTTAAATTCCAGGACGAGCAATTTGGGTGCGTGTTGCGAGCATACTGAGTGGGTGGAAATTATCATTATGAACTACAAATAAAACGTTA] [+] EMBL CNS094HL [AAGAAAATGTTGCTGTATCGAAGCGATCGCTCCTGTTGCAGCTAAAAACTGAAAACAAACCCAATAAACTAGGCGAATCTCAGTTAATAGTACACCAAAATGGCAGACGATTTGCAGAATTACAAGCTGCAACTACAGCAGGTCGAAGCTGCCCTGCTTACAGATCCGGAGAACTCGGAACTGCTCAAGCTGAAGGA GACTCTGAACGAGGTGATCGAACTGACGAAGGATCTGATCAAGGCGCA CAGGAACCGGAACAGAAAAAGTCGTCGTACATTGAGCCGGCCACCAGCAGCTACTACGAGGGCGTCTCGGGAGCGGACAAGAAGCAGCCGAAGCCAGCGAAGGTATGGAAGGTGGGTGATAAATGTTCTGCTAAGTGGATTGAAGACGGTCAGTACTATGATGCTACCATAGAGTCGATCTCGGAAACGGGCGAGGTGAACATCGTGTTTGAGGCGTACCAGAACCGGAGCAACACCACGATTAGTGAGCTGAAGGAGCCAAAGACAC GGAACGAGGTGTTTCCCGCCAACAGTAACAAACGCATGCG GCACAATCAGAAAGAATACCTGAAGAAAAAGAAGATGAAAAAAATCCAGCGATTCAAGGAGCTGGAGGAGGAACGGGAATGCGAGAAGAACAAATGGCTTCAGTTTACCGCCAAATCATCGAAAAAGTCCGGTGGCGTGAAACCGAAGAGTATTTTTGCTTCGCCCGAAAATGTGAACGGCCGGGTCGGTATCGGTACCTGCGGTGTGTCCGGCAAACCGATGACGGGGTTTTCACACGGAGAAAAGTACAGGAAAGGTGTTTAGGGA CGCTTTTGCTGGCACGAACGAGTGCTGGGGCTGAGAGCTTGAGTGCTCCACACGAATCGTTCTGCTTCTTTTTTCAATCGAAGTAAATTCTTGATATGGCTTAGAAATTAAGATTACTGCACACACATACACACACACACACGCACATAGGgct ] [+] EMBL CNS09KWU [ gATGTTGCTGTATCGAAGCGATCGCTCCTGTTGCAGCTAAAAACTGAAAACAAACCCAATAAACTAGGCGAATCTCGGTTAATAGTACACCAAAATGGCAGACGATTTGCAGAATTACAAGCTGCAACTACAGCAGGTCGAAGCTGCCCTGCTTACAGATCCGGAGAACTCGGAACTGCTCAAGCTGAAGGAGGAT CTGAACGAGGTGATCGAACTGACGAAGGATCTGATCAAGGCGCA CAGGAACCGGAACAGAAAAAGTCGTCGTACATTGAGCCGGCCACCAGCAGCTACTACGAGGGCGTCTCGGGAGCGGACAAGAAGCAGCCGAAGCCAGCGAAGGTATGGAAGGTGGGTGATAAATGTTCTGCTAAGTGGATTGAAGACGGTCAGTACTATGATGCTACCATAGAGTCGATCTCGGAAACGGGCGAGGTGAACATCGTGTTTGAGGCGTACCAGAACCGGAGCAACACCACGATTAGTGAGCTGAAGGAGCCAAAGACAC GGAACGAGGTGTTTCCCGCCAACAGTAACAAACGCATGCGTGCACAATCAGAAAGAATACCTGAAGAAAAAGAAGATGAAAAAAATCCAGCGATTCAAGGAGCTGGAGGAGGAACGGGAATGCGAGAAGAACAAATGGCTTCAGTTTACCGCCAAATCATCGAAAAAGTCCGGTGGCGTGAAACCGAAGAGTATTTTTGCTTCGCCCGAAAATGTGAACGGCCGGGTCGGTATCGGTACCTGCGGTGTGTCCGGCAAACCGATGACGGAGTTTTCACACGGAGAAAAGTACAGGAAAGGTGTTTAGGGA CGCTTTTGCTGGCACGAACGAGTTCTGGGGCTGAGAGCTTGAGTGCTCCACACGAATCGTTCTGCTTCTTTTTTCAATCGAAGTAAATTCTTGAT ] [+] EMBL BM600835 [ CCGCGAAGCGATCGCTCCTGCTGCAGCTAAAAACTGAAAACAAACCCAATAAACTAGGCGAATCTCGGTTGATAGTACACCAAAATGGCAGACGATTTGCAGAATTACAAGCTGCAACTACAGCAGGTCGAAGCTGCCCTGCTAACAGATCCGGAGAACTCGGAACTGCTCAAGCTGAAGGAGGAC CTCAACGAGGTGATCGAACTGACGAAGGATCTGATCAAGGCGCAGCAGGAACCGGAACAGAAAAAGTCATCGTACATTGAGCCGGCCACCAGCAGCTACTACGAGGGCGTCTCGGGAGCGGACAAGAAGCAGTCAAAGCCAGCGAAGGTATGGAAGGTGGGTGATAAATGTTCTGCTAAGTGGATTGAAGACGGTCAGTACTATGATGCTACCATAGAGTCGATCTCGGAAACGGGCGAGGTGAACATCGTGTTTGAGGCGTACCAGAACCGGAGCAACACCACGATTAGTGAGCTGAAGGAGCCAAAGACACGGGAACGAGGTGTTTCCCGCCAACAGTAACAAACGCATGCG GCACAATCAGAAGGAATACCTGAAGAAAAAGAAGATGAAAAAAATCCAGCGATTCAAGG ] [+] EMBL BM610586 [ CCGCGAAGCGATCGCTCCTGCTGCAGCTAAAAACTGAAAACAAACCCAATAAACTAGGCGAATCTCGGTTGATAGTACACCAAAATGGCAGACGATTTGCAGAATTACAAGCTGCAACTACAGCAGGTCGAAGCTGCCCTGCTAACAGATCCGGAGAACTCGGAACTGCTCAAGCTGAAGGAGGAC CTCAACGAGGTGATCGAACTGACGAAGGATCTGATCAAGGCGCAGCAGGAACCGGAACAGAAAAAGTCATCGTACATTGAGCCGGCCACCAGCAGCTACTACGAGGGCGTCTCGGGAGCGGACAAGAAGCAGTCAAAGCCAGCGAAGGTATGGAAGGTGGGTGATAAATGTTCTGCTAAGTGGATTGAAGACGGTCAGTACTATGATGCTACCATAGAGTCGATCTCGGAAACGGGCGAGGTGAACATCGTGTTTGAGGCGTACCAGAACCGGAGCAACACCACGATTAGTGAGCTGAAGGAGCCAAAGACACGGGAACGAGGTGTTTCCCGCCAACAGTAACAAACGCATGCG GCACAATCAGAAGGAATACCTGAAGAAAAAGAAGATGAAAAAAATCCAGCGATTCAAGGAGCTGGAAGAGGAACGGGAATGCGAGAAGAACAAATGGCTTCAGTTTACCG ] [+] EMBL BM648396 [ CCGCGAAGCGATCGCTCCTGCTGCAGCTAAAAACTGAAAACAAACCCAATAAACTAGGCGAATCTCGGTTGATAGTACACCAAAATGGCAGACGATTTGCAGAATTACAAGCTGCAACTACAGCAGGTCGAAGCTGCCCTGCTTACAGATCCGGAGAACTCGGAACTGCTCAAGCTGAAGGAGGAC CTGAACGAGGTGATCGAACTGACGAAGGATCTGATCAAGGCGCAGCAGGAACCGGAACAGAAAAAGTCGTCGTACATTGAGCCGGCCACCAGCAGCTACTACGAGGGCGTCTCGGGAGCGGACAAGAAGCAGCCGAAGCCAGCGAAGGTATGGAAGGTGGGTGATAAATGTTCTGCTAAGTGGATTGAAGACGGTCAGTACTATGATGCTACCATAGAGTCGATCTCGGAAACGGGCGAGGTGAACATCGTGTTTGAGGCGTACCAGAACCGGAGCAACACCACGATTAGTGAGCTGAAGGAGCCAAAGACAC GGAACGAGGTGTTTCCCGCCAACAGTAACAAACGCATGCG GCACAATCAGAAAGAATACCTGAAGAAAAAGAAGATGAAAAAAATCCAGCGATTCAAGGAGCTGGAGGAGGAACGGGAATGCGAGAAGAACAAATGGCTTCAGTTTACCGCCAAATCATCGAAAAAGTCCGGTGGCGT ] [+] EMBL CNS09JU1 [ GATCGCTCCTGTTGCAGCTAAAAACTGAAAACAAACCCAATAAACTAGGCGAATCTCGGTTAATAGTACACCAAAATGGCAGACGATTTGCAGAATTACAAGCTGCAACTACAGCAGGTCGAAGCTGCCCTGCTTACAGATCCGGAGAACTCGGAACTGCTCAAGCTGAAGGAGGAT CTGAACGAGGTGATCGAACTGACGAAGGATCTGATCAAGGCGCA CAGGAACCGGAACAGAAAAAGTCGTCGTACATTGAGCCGGCCACCAGCAGCTACTACGAGGGCGTCTCGGGAGCGGACAAGAAGCAGCCGAAGCCAGCGAAGGTATGGAAGGTGGGTGATAAATGTTCTGCTAAGTGGATTGAAGACGGTCAGTACTATGATGCTACCATAGAGTCGATCTCGGAAACGGGCGAGGTGAACATCGTGTTTGAGGCGTACCAGAACCGGAGCAACACCACGATTAGTGAGCTGAAGGAGCCAAAGACAC GGAACGAGGTGTTTCCCGCCAACAGTAACAAACGCATGCG GCACAATCAGAAAGAATACCTGAAGAAAAAGAAGATGAAAAAAATCCAGCGATTCAAGGAGCTGGAGGAGGAACGGGAATGCGAGAAGAACAAATGGCTTCAGTTTACCGCCAAATCATCGAAAAAGTCCGGTGGCGTGAAACCGAAGAGTATTTTTGCTTCGCCCGAAAATGTGAACGGCCGGGTCGGTATCGGTACCTGCGGTGTGTCCGGCAAACCGATGACGGAGTTTTCACACGGAGAAAAGTACAGGAAAGGTGTTTAGGGA CGCTTTTGCTGGCACGAACGAGTGCTGGGGCTGAGAGCTTGAGTGCTCCACACGAATCGTTCTGCTTCTTTTTTCAATCGAAGTAAATTCTTGATATGGCTTAGAAATTAAGATTACTGCACACACATACACACACACACACGCACATAGGCTTGTGTGCAGTTTGTCTTCACCTTTTTACCTAATCATTTTACACAGTGAA ] [+] EMBL CNS09FKG [ TCCTGTTGCAGCTAAAAACTGAAAACAAACCCAATAAACTAGGCGAATCTCGGTTAATAGTACACCAAAATGGCAGACGATTTGCAGAATTACAAGCTGCAACTACAGCAGGTCGAAGCTGCCCTGCTTACAGATCCGGAGAACTCGGAACTGCTCAAGCTGAAGGAGGAT CTGAACGAGGTGATCGAACTGACGAAGGATCTGATCAAGG ] [+] EMBL BX616634 [ gcTGCAGCTAAAAACTGAAAACAAACCCAATAAACTAGGCGAATCTCGGTTGATAGTACACCAAAATGGCAGACGATTTGCAGAATTACAAGCTGCAACTACAGCAGGTCGAAGCTGCCCTGCTAACAGATCCGGAGAACTCGGAACTGCTCAAGCTGAAGGAGGAC CTCAACGAGGTGATCGAACTGACGAAGGATCTGATCAAGGCGCAGCAGGAACCGGAACAGAAAAAGTCATCGTACATTGAGCCGGCCACCAGCAGCTACTACGAGGGCGTCTCGGGAGCGGACAAGAAGCAGTCAAAGCCAGCGAAGGTATGGAAGGTGGGTGATAAATGTTCTGCTAAGTGGATTGAAGACGGTCAGTACTATGATGCTACCATAGAGTCGATCTCGGAAACGGGCGAGGTGAACATCGTGTTTGAGGCGTACCAGAACCGGAGCAACACCACGATTAGTGAGCTGAAGGAGCCAAAGACAC GGAACGAGGTGTTTCCCGCCAACAGTAACAAACGCATGCG GCACAATCAGAAGGAATACCTGAAGAAAAAGAAGATGAAAAAAATCCAGCGATTCAAGGAGCTGGAAGAGGAACGGGAATGCGAGAAGAACAAATGGCTTCAGTTTACCGCCAAATCATCGAAAAAGTCCGGTGGCGTGAAACCGAAGAGTATTTTTGCTTCGCCCCGAAATGTGAACGGCCGGGTCGGTATCGGTACCTGCGGTGTGTCCGGCAAACCGATG ] [-] EMBL CNS09JU2 [ TCGCACTGACGAAGGATCTGATCAAGGCGCAGCAGGAACCGGAACAGAAAAAGTCGTCGTACATTGAGCCGGCCACCAGCAGCTACTACGAGGGCGTCTCGGGAGCGGACAAGAAGCAGCCGAAGCCAGCGAAGGTATGGAAGGTGGGTGATAAATGTTCTGCTAAGTGGATTGAAGACGGTCAGTACTATGATGCTACCATAGAGTCGATCTCGGAAACGGGCGAGGTGAACATCGTGTTTGAGGCGTACCAGAACCGGAGCAACACCACGATTAGTGAGCTGAAGGAGCCAAAGACAC GGAACGAGGTGTTTCCCGCCAACAGTAACAAACGCATGCG GCACAATCAGAAAGAATACCTGAAGAAAAAGAAGATGAAAAAAATCCAGCGATTCAAGGAGCTGGAGGAGGAACGGGAATGCGAGAAGAACAAATGGCTTCAGTTTACCGCCAAATCATCGAAAAAGTCCGGTGGCGTGAAACCGAAGAGTATTTTTG TTCGCCCGAAAATGTGAACGGCCGGGTCGGTATCGGTA CTGCGGTGTGTCCGGCAAACCGATGACGGAGTTTTCACACGGAGAAAAGTACAGGAAAGGTGTTTAGGGA CGCTTTTGCTGGCACGAACGAGTGCTGGGGCTGAGAGCTTGAGTGCTCCACACGAATCGTTCTGCTTCTTTTTTCAATCGAAGTAAATTCTTGATATGGCTTAGAAATTAAGATTACTGCACACACATAAACACAAACAAACGCACATAGGCTTGTGTGCAGTTTGTCTTCACCTTTTTACCTAATCATTTTACACAGTGAAATGATCCGTCTTTGCCATCGCAGTTCCGGCAGAAACCCGTTTTTGCTGGTGAAGGATTTAAATTCCAGGACGAGCAATTTGGGTGCGTGTTGCGAGCATACTGAGTGGGTGGAAATTATCATTATGA ] [-] EMBL CNS09KWV [ ACCGGAGCAACACCACGATTAGTGAGCTGAAGGAGCCAAAGACAC GGAACGAGGTGTTTCCCGCCAACAGTAACAAACGCATGCG GCACAATCAGAAAGAATACCTGAAGAAAAAGAAGATGAAAAAAATCCAGCGATTCAAGGAGCTGGAGGAGGGACGGGAATGCGAGAAGAACAAATGGCTTCAGTTTACCGCCAAATCATCGAAAAAGTCCGGTGGCGTGAAACCGAAGAGTATTTTTG TTCGCCCGAAAATGTGAACGGCCGGGTCGGTATCGGTA CTGCGGTGTGTCCGGCAAACCGATGACGGAGTTTTCACACGGAGAAAAGTACAGGAAAGGTGTTTAGGGAGCGCTTTTGCTGGCACGAACGAGTGCTGGGGCTGAGAGCTTGAGTGCTCCACACGAATCGTTCTGCTTCTTTTTTCAATCGAAGTAAATTCTTGATATGGCTTAGAAATTAAGATTACTGAACACACATACAAAAAAACAAACGCACATAGGCTTGTGTGCAGTTTGTCTTCACCTTTTTACCTAATCATTTTACACAGTGAAATGATCCGTCTTTGCCATCGCAGTTCCGGCAGAAACCCGTTTTTGCTGGTGAAGGATTTAAATTCCAGGACGAGCAATTTGGGTGCGTGTTGCGAGCATACTGAGTGGGTGGAAATTATCATTATGAACTACAAATAAA ] [-] EMBL CNS094HM [ tTCGTTATCGGTA CTGCGGTGTGTCCGGCAAACCGATGACGGGGTTTTCACACGGAGAAAAGTACAGGAAAGGTGTTTAGGGA CGCTTTTGCTGGCACGAACGAGTGCTGGGGCTGAGAGCTTGAGTGCTCCACACGAATCGTTCTGCTTCTTTTTTCAACCGAAGTAAATTCTTGATATGGCTTAGAAATTAAGATTACTGCACACACATACACACACACACACGCACGTTGGCTTGTGTGCAGTTTGTCTTCACCTTTTTACCTAATCATTTTACACAGTGAAATGATCCGTCTTTGCCATCGCAGTTCCGGCAGAAACCCGTTTTTGCTGGTGAAGGATTTAAATTCCAGGACGAGCAATTTGGGTGCGTGTTGCGAGCATACTGAGTGGGTGGAAATTATCATTATGAACTACAAATAAAACGTTA] consensusID : consensus_9064#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 688 fasta sequence [CCGCGGACGCGTGGGCAAACCCAATAAACTAGGCGAATCTCGGTTGATAGTACACCAAAATGGCAGACGATTTGCAGAATTACAAGCTGCAACTACAGCAGGTCGAAGCTGCCCTGCTAACAGATCCGGAGAACTCGGAACTGCTCAAGCTGAAGGAGGACCTCAACGAGGTGATCGAACTGACGAAGGATCTGATCAAGGCGCAGCAGGAACCGGAACAGAAAAAGTCATCGTACATTGAGCCGGCCACCAGCAGCTACTACGAGGGCGTCTCGGGAGCGGACAAGAAGCAGTCAAAGCCAGCGAAGGTATGGAAGGTGGGTGATAAATGTTCTGCTAAGTGGATTGAAGACGGTCAGTACTATGATGCTACCATAGAGTCGATCTCGGAAACGGGCGAGGTGAACATCGTGTTTGAGGCGTACCAGAACCGGAGCAACACCACGATTAGTGAGCTGAAGGAGCCAAAGACACGGAACGAGGTGTTTCCCGCCAACAGTAACAAACGCATGCGGCACAATCAGAAGGAATACCTGAAGAAAAAGAAGATGAAAAAAATCCAGCGATTCAAGGAGCTGGAAGAGGAACGGGAATGCGAGAAGAACAAATGGCTTCAGTTTACCGCCAAATCATCGAAAAAGTCCGGTGGCGTGAAACCGAAGAGTATTTTTGCTTCGCCCGAAAATGT] [+] EMBL BM583837 [CCGCGGACGCGTGGGCAAACCCAATAAACTAGGCGAATCTCGGTTGATAGTACACCAAAATGGCAGACGATTTGCAGAATTACAAGCTGCAACTACAGCAGGTCGAAGCTGCCCTGCTAACAGATCCGGAGAACTCGGAACTGCTCAAGCTGAAGGAGGACCTCAACGAGGTGATCGAACTGACGAAGGATCTGATCAAGGCGCAGCAGGAACCGGAACAGAAAAAGTCATCGTACATTGAGCCGGCCACCAGCAGCTACTACGAGGGCGTCTCGGGAGCGGACAAGAAGCAGTCAAAGCCAGCGAAGGTATGGAAGGTGGGTGATAAATGTTCTGCTAAGTGGATTGAAGACGGTCAGTACTATGATGCTACCATAGAGTCGATCTCGGAAACGGGCGAGGTGAACATCGTGTTTGAGGCGTACCAGAACCGGAGCAACACCACGATTAGTGAGCTGAAGGAGCCAAAGACACGGAACGAGGTGTTTCCCGCCAACAGTAACAAACGCATGCGGCACAATCAGAAGGAATACCTGAAGAAAAAGAAGATGAAAAAAATCCAGCGATTCAAGGAGCTGGAAGAGGAACGGGAATGCGAGAAGAACAAATGGCTTCAGTTTACCGCCAAATCATCGAAAAAGTCCGGTGGCGTGAAACCGAAGAGTATTTTTGCTTCGCCCGAAAATGT] consensusID : consensus_9064#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 526 fasta sequence [GCCCCGGGTTNTAAGCGATCGCTCCTGGCTGCNGCTGAAAACTGAAATTAAACCCAATAAACTAGGCGAATCTCGGTTGATAGTACCTCAAAATGGCAGACGATTTGCAGAATTACAAGCTGCAACTACAGCAGGTCGAAGCTGCCTGCTAACAGATCCGGAGAACTCGGAACTGCTCAAGCTGAAGGCAGGACCTGAACGAGGTGATCGAACTGACGAAGGATCTGATCAAGGCGCAGCAGGAACCGGAACAGAAAAACGTCATCGTACATTGAGCCGGCCACCAGCAGCATACTACGAGGGCGTCTCGNGGAGACGGACAAGAAGCAGTCAAACGCCAGCGAAGGTACTGGAAGGTGGGTGATAAACTGTNCTGCNTAAGTGGACTTGNAGACGGTCAGGTACTATGATGCTACCATAGAGTCGATCTCGTAAACGGGCTGACGTGAACATCGTGTATGAGGCTGTACCAGAACCGGTAGCAACACCACGATTACGTGAGCTGAAGGAGCCAAAAGACAAGGAA] [+] EMBL AL697604 [GCCCCGGGTTNTAAGCGATCGCTCCTGGCTGCNGCTGAAAACTGAAATTAAACCCAATAAACTAGGCGAATCTCGGTTGATAGTACCTCAAAATGGCAGACGATTTGCAGAATTACAAGCTGCAACTACAGCAGGTCGAAGCTGCCTGCTAACAGATCCGGAGAACTCGGAACTGCTCAAGCTGAAGGCAGGACCTGAACGAGGTGATCGAACTGACGAAGGATCTGATCAAGGCGCAGCAGGAACCGGAACAGAAAAACGTCATCGTACATTGAGCCGGCCACCAGCAGCATACTACGAGGGCGTCTCGNGGAGACGGACAAGAAGCAGTCAAACGCCAGCGAAGGTACTGGAAGGTGGGTGATAAACTGTNCTGCNTAAGTGGACTTGNAGACGGTCAGGTACTATGATGCTACCATAGAGTCGATCTCGTAAACGGGCTGACGTGAACATCGTGTATGAGGCTGTACCAGAACCGGTAGCAACACCACGATTACGTGAGCTGAAGGAGCCAAAAGACAAGGAA] consensusID : consensus_9064#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 488 fasta sequence [GCAGCTAAAAACTGAAAACAAACCCAATAAACTAGGCGAATCTCGGTTGATAGTACACCAAAATGGCAGACGATTTGCAGAATTACAAGCTGCAACTACAGCAGGTCGAAGCTGCCCTGCTAACAGATCCGGAGAACTCGGAACTGCTCAAGCTGAAGGAGCCAAAGACACGGAACGAGGTGTTTCCCGCCAACAGTAACAAACGCATGCGGCACAATCAGAAGGAATACCTGAAGAAAAAGAAGATGAAAAAAATCCAGCGATTCAAGGAGCTGGAAGAGGAACGGGAATGCGAGAAGAACAAATGGCTTCAGTTTACCGCCAAATCATCGAAAAAGTCCGGTGGCGTGAAACCGAAGAGTATTTTTGCTTCGCCCGAAAATGTGAACGGCCGGGTCGGTATCGGTACCTGCGGTGTGTCCGGCAAACCGATGACGGAGTTTTCACACGGAGAAAAGTACAGGAAAGGTGTTTAGGGACGTTTTTGC] [+] EMBL BX610993 [GCAGCTAAAAACTGAAAACAAACCCAATAAACTAGGCGAATCTCGGTTGATAGTACACCAAAATGGCAGACGATTTGCAGAATTACAAGCTGCAACTACAGCAGGTCGAAGCTGCCCTGCTAACAGATCCGGAGAACTCGGAACTGCTCAAGCTGAAGGAGCCAAAGACACGGAACGAGGTGTTTCCCGCCAACAGTAACAAACGCATGCGGCACAATCAGAAGGAATACCTGAAGAAAAAGAAGATGAAAAAAATCCAGCGATTCAAGGAGCTGGAAGAGGAACGGGAATGCGAGAAGAACAAATGGCTTCAGTTTACCGCCAAATCATCGAAAAAGTCCGGTGGCGTGAAACCGAAGAGTATTTTTGCTTCGCCCGAAAATGTGAACGGCCGGGTCGGTATCGGTACCTGCGGTGTGTCCGGCAAACCGATGACGGAGTTTTCACACGGAGAAAAGTACAGGAAAGGTGTTTAGGGACGTTTTTGC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9064#1 ---------------------------------------CCGCGGACGCGTGGG--CAAA 19 consensus_9064#2 --------GCCCCGGGTTNTAAGCGATCGCTCCTGGCTGCNGCTGAAAACTGAAATTAAA 52 consensus_9064#0 AAGAAAATGTTGCTGCCGCGAAGCGATCGCTCCTG-TTGCAGCTAAAAACTGAAAACAAA 59 consensus_9064#3 --------------------------------------GCAGCTAAAAACTGAAAACAAA 22 * ** * ** *** consensus_9064#1 CCCAATAAACTAGGCGAATCTCGGTTGATAGTACACCAAAATGGCAGACGATTTGCAGAA 79 consensus_9064#2 CCCAATAAACTAGGCGAATCTCGGTTGATAGTACCTCAAAATGGCAGACGATTTGCAGAA 112 consensus_9064#0 CCCAATAAACTAGGCGAATCTCGGTTAATAGTACACCAAAATGGCAGACGATTTGCAGAA 119 consensus_9064#3 CCCAATAAACTAGGCGAATCTCGGTTGATAGTACACCAAAATGGCAGACGATTTGCAGAA 82 ************************** ******* ************************ consensus_9064#1 TTACAAGCTGCAACTACAGCAGGTCGAAGCTGCCCTGCTAACAGATCCGGAGAACTCGGA 139 consensus_9064#2 TTACAAGCTGCAACTACAGCAGGTCGAAGCTGCC-TGCTAACAGATCCGGAGAACTCGGA 171 consensus_9064#0 TTACAAGCTGCAACTACAGCAGGTCGAAGCTGCCCTGCTTACAGATCCGGAGAACTCGGA 179 consensus_9064#3 TTACAAGCTGCAACTACAGCAGGTCGAAGCTGCCCTGCTAACAGATCCGGAGAACTCGGA 142 ********************************** **** ******************** consensus_9064#1 ACTGCTCAAGCTGAAGG-----AGGAC-CTCAACGAGGTGAT-----CGAAC--TGACGA 186 consensus_9064#2 ACTGCTCAAGCTGAAGGC----AGGAC-CTGAACGAGGTGAT-----CGAAC--TGACGA 219 consensus_9064#0 ACTGCTCAAGCTGAAGG-----AGGAC-CTGAACGAGGTGAT-----CGAAC--TGACGA 226 consensus_9064#3 ACTGCTCAAGCTGAAGGAGCCAAAGACACGGAACGAGGTGTTTCCCGCCAACAGTAACAA 202 ***************** * *** * ********* * * *** * ** * consensus_9064#1 AGG-ATCTGATCAAGGCGCAGCAGGAACCGGAACAGAAAAA-GTCATCGTACATTGAGCC 244 consensus_9064#2 AGG-ATCTGATCAAGGCGCAGCAGGAACCGGAACAGAAAAACGTCATCGTACATTGAGCC 278 consensus_9064#0 AGG-ATCTGATCAAGGCGCAGCAGGAACCGGAACAGAAAAA-GTCGTCGTACATTGAGCC 284 consensus_9064#3 ACGCATGCGGCACAATCAGAAGGAATACCTGAAGAAAAAGAAGATGAAAAAAATCCAGCG 262 * * ** * * * * *** *** * *** * * * ** *** consensus_9064#1 GGCCACCAGCAGC-TACTACGAGGGCGTCTCGGGAG--CGGACAAGAAGCAGTCAAA-GC 300 consensus_9064#2 GGCCACCAGCAGCATACTACGAGGGCGTCTCGNGGAGACGGACAAGAAGCAGTCAAACGC 338 consensus_9064#0 GGCCACCAGCAGC-TACTACGAGGGCGTCTCGGGAG--CGGACAAGAAGCAGCCGAA-GC 340 consensus_9064#3 ATTCA--AGGAGC-TGGAAGAGGAACGGGAATGCGAGAAGAACAAATGGCT-TCAGTTTA 318 ** ** *** * * * ** * **** ** * consensus_9064#1 CAGCGAAGGTA-TGGAAGGTGGGTGATAAA-TGTTCTGCT-AAGTGGA-TTGAAGACGGT 356 consensus_9064#2 CAGCGAAGGTACTGGAAGGTGGGTGATAAACTGTNCTGCNTAAGTGGACTTGNAGACGGT 398 consensus_9064#0 CAGCGAAGGTA-TGGAAGGTGGGTGATAAA-TGTTCTGCT-AAGTGGA-TTGAAGACGGT 396 consensus_9064#3 CCGCCAAATCA-TCGAAAAAGTCCGGTGGC--GTGAAACCGAAGAGTATTTTTGCTTCGC 375 * ** ** * * *** * * * ** * *** * * ** * consensus_9064#1 CAG-TACTATGATGCTACCATAGAGTCGATCTCGGAAACGGGC-GAGGTGAACATCGTGT 414 consensus_9064#2 CAGGTACTATGATGCTACCATAGAGTCGATCTCGTAAACGGGCTGACGTGAACATCGTGT 458 consensus_9064#0 CAG-TACTATGATGCTACCATAGAGTCGATCTCGGAAACGGGC-GAGGTGAACATCGTGT 454 consensus_9064#3 CCGAAAATGTGA----ACGGCCGGGTCGGTATCG-GTACCTGC-GGTGTGTCCGGCAAAC 429 * * * * *** ** * **** * *** ** ** * *** * * consensus_9064#1 TTGAGGC-GTACCAGAACCGG-AGCAACACCACGATTA-GTGAGCTGAAGGAGCCAAA-G 470 consensus_9064#2 ATGAGGCTGTACCAGAACCGGTAGCAACACCACGATTACGTGAGCTGAAGGAGCCAAAAG 518 consensus_9064#0 TTGAGGC-GTACCAGAACCGG-AGCAACACCACGATTA-GTGAGCTGAAGGAGCCAAA-G 510 consensus_9064#3 CGATGACGGAGTTTTCACACGGAGAAA-AGTACAGGAA-AGGTGTTTAGGGACGTTTTTG 487 * * * ** * ** ** * ** * * * * * *** * consensus_9064#1 ACACGGAACGAGGTGTTTCCCGCCAACAGTAACAAACGCATGCGGCACAATCAGAAGGAA 530 consensus_9064#2 ACAAGGAA---------------------------------------------------- 526 consensus_9064#0 ACACGGAACGAGGTGTTTCCCGCCAACAGTAACAAACGCATGCGGCACAATCAGAAAGAA 570 consensus_9064#3 C----------------------------------------------------------- 488 consensus_9064#1 TACCTGAAGAAAAAGAAGATGAAAAAAATCCAGCGATTCAAGGAGCTGGAAGAGGAACGG 590 consensus_9064#2 ------------------------------------------------------------ consensus_9064#0 TACCTGAAGAAAAAGAAGATGAAAAAAATCCAGCGATTCAAGGAGCTGGAGGAGGAACGG 630 consensus_9064#3 ------------------------------------------------------------ consensus_9064#1 GAATGCGAGAAGAACAAATGGCTTCAGTTTACCGCCAAATCATCGAAAAAGTCCGGTGGC 650 consensus_9064#2 ------------------------------------------------------------ consensus_9064#0 GAATGCGAGAAGAACAAATGGCTTCAGTTTACCGCCAAATCATCGAAAAAGTCCGGTGGC 690 consensus_9064#3 ------------------------------------------------------------ consensus_9064#1 GTGAAACCGAAGAGTATTTTTGCTTCGCCCGAAAATGT---------------------- 688 consensus_9064#2 ------------------------------------------------------------ consensus_9064#0 GTGAAACCGAAGAGTATTTTTGCTTCGCCCGAAAATGTGAACGGCCGGGTCGGTATCGGT 750 consensus_9064#3 ------------------------------------------------------------ consensus_9064#1 ------------------------------------------------------------ consensus_9064#2 ------------------------------------------------------------ consensus_9064#0 ACCTGCGGTGTGTCCGGCAAACCGATGACGGAGTTTTCACACGGAGAAAAGTACAGGAAA 810 consensus_9064#3 ------------------------------------------------------------ consensus_9064#1 ------------------------------------------------------------ consensus_9064#2 ------------------------------------------------------------ consensus_9064#0 GGTGTTTAGGGACGCTTTTGCTGGCACGAACGAGTGCTGGGGCTGAGAGCTTGAGTGCTC 870 consensus_9064#3 ------------------------------------------------------------ consensus_9064#1 ------------------------------------------------------------ consensus_9064#2 ------------------------------------------------------------ consensus_9064#0 CACACGAATCGTTCTGCTTCTTTTTTCAATCGAAGTAAATTCTTGATATGGCTTAGAAAT 930 consensus_9064#3 ------------------------------------------------------------ consensus_9064#1 ------------------------------------------------------------ consensus_9064#2 ------------------------------------------------------------ consensus_9064#0 TAAGATTACTGCACACACATACACACACACACACGCACATAGGCTTGTGTGCAGTTTGTC 990 consensus_9064#3 ------------------------------------------------------------ consensus_9064#1 ------------------------------------------------------------ consensus_9064#2 ------------------------------------------------------------ consensus_9064#0 TTCACCTTTTTACCTAATCATTTTACACAGTGAAATGATCCGTCTTTGCCATCGCAGTTC 1050 consensus_9064#3 ------------------------------------------------------------ consensus_9064#1 ------------------------------------------------------------ consensus_9064#2 ------------------------------------------------------------ consensus_9064#0 CGGCAGAAACCCGTTTTTGCTGGTGAAGGATTTAAATTCCAGGACGAGCAATTTGGGTGC 1110 consensus_9064#3 ------------------------------------------------------------ consensus_9064#1 ----------------------------------------------------------- consensus_9064#2 ----------------------------------------------------------- consensus_9064#0 GTGTTGCGAGCATACTGAGTGGGTGGAAATTATCATTATGAACTACAAATAAAACGTTA 1169 consensus_9064#3 ----------------------------------------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||