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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9064#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 1169 fasta sequence
[AAGAAAATGTTGCTGCCGCGAAGCGATCGCTCCTGTTGCAGCTAAAAACTGAAAACAAACCCAATAAACTAGGCGAATCTCGGTTAATAGTACACCAAAATGGCAGACGATTTGCAGAATTACAAGCTGCAACTACAGCAGGTCGAAGCTGCCCTGCTTACAGATCCGGAGAACTCGGAACTGCTCAAGCTGAAGGAGGAC-CTGAACGAGGTGATCGAACTGACGAAGGATCTGATCAAGGCGCAGCAGGAACCGGAACAGAAAAAGTCGTCGTACATTGAGCCGGCCACCAGCAGCTACTACGAGGGCGTCTCGGGAGCGGACAAGAAGCAGCCGAAGCCAGCGAAGGTATGGAAGGTGGGTGATAAATGTTCTGCTAAGTGGATTGAAGACGGTCAGTACTATGATGCTACCATAGAGTCGATCTCGGAAACGGGCGAGGTGAACATCGTGTTTGAGGCGTACCAGAACCGGAGCAACACCACGATTAGTGAGCTGAAGGAGCCAAAGACAC-GGAACGAGGTGTTTCCCGCCAACAGTAACAAACGCATGCG-GCACAATCAGAAAGAATACCTGAAGAAAAAGAAGATGAAAAAAATCCAGCGATTCAAGGAGCTGGAGGAGGAACGGGAATGCGAGAAGAACAAATGGCTTCAGTTTACCGCCAAATCATCGAAAAAGTCCGGTGGCGTGAAACCGAAGAGTATTTTTGCTTCGCCCGAAAATGTGAACGGCCGGGTCGGTATCGGTACCTGCGGTGTGTCCGGCAAACCGATGACGGAGTTTTCACACGGAGAAAAGTACAGGAAAGGTGTTTAGGGA-CGCTTTTGCTGGCACGAACGAGTGCTGGGGCTGAGAGCTTGAGTGCTCCACACGAATCGTTCTGCTTCTTTTTTCAATCGAAGTAAATTCTTGATATGGCTTAGAAATTAAGATTACTGCACACACATACACACACACACACGCACATAGGCTTGTGTGCAGTTTGTCTTCACCTTTTTACCTAATCATTTTACACAGTGAAATGATCCGTCTTTGCCATCGCAGTTCCGGCAGAAACCCGTTTTTGCTGGTGAAGGATTTAAATTCCAGGACGAGCAATTTGGGTGCGTGTTGCGAGCATACTGAGTGGGTGGAAATTATCATTATGAACTACAAATAAAACGTTA]
[+] EMBL CNS094HL [AAGAAAATGTTGCTGTATCGAAGCGATCGCTCCTGTTGCAGCTAAAAACTGAAAACAAACCCAATAAACTAGGCGAATCTCAGTTAATAGTACACCAAAATGGCAGACGATTTGCAGAATTACAAGCTGCAACTACAGCAGGTCGAAGCTGCCCTGCTTACAGATCCGGAGAACTCGGAACTGCTCAAGCTGAAGGA GACTCTGAACGAGGTGATCGAACTGACGAAGGATCTGATCAAGGCGCA CAGGAACCGGAACAGAAAAAGTCGTCGTACATTGAGCCGGCCACCAGCAGCTACTACGAGGGCGTCTCGGGAGCGGACAAGAAGCAGCCGAAGCCAGCGAAGGTATGGAAGGTGGGTGATAAATGTTCTGCTAAGTGGATTGAAGACGGTCAGTACTATGATGCTACCATAGAGTCGATCTCGGAAACGGGCGAGGTGAACATCGTGTTTGAGGCGTACCAGAACCGGAGCAACACCACGATTAGTGAGCTGAAGGAGCCAAAGACAC GGAACGAGGTGTTTCCCGCCAACAGTAACAAACGCATGCG GCACAATCAGAAAGAATACCTGAAGAAAAAGAAGATGAAAAAAATCCAGCGATTCAAGGAGCTGGAGGAGGAACGGGAATGCGAGAAGAACAAATGGCTTCAGTTTACCGCCAAATCATCGAAAAAGTCCGGTGGCGTGAAACCGAAGAGTATTTTTGCTTCGCCCGAAAATGTGAACGGCCGGGTCGGTATCGGTACCTGCGGTGTGTCCGGCAAACCGATGACGGGGTTTTCACACGGAGAAAAGTACAGGAAAGGTGTTTAGGGA CGCTTTTGCTGGCACGAACGAGTGCTGGGGCTGAGAGCTTGAGTGCTCCACACGAATCGTTCTGCTTCTTTTTTCAATCGAAGTAAATTCTTGATATGGCTTAGAAATTAAGATTACTGCACACACATACACACACACACACGCACATAGGgct ]
[+] EMBL CNS09KWU [ gATGTTGCTGTATCGAAGCGATCGCTCCTGTTGCAGCTAAAAACTGAAAACAAACCCAATAAACTAGGCGAATCTCGGTTAATAGTACACCAAAATGGCAGACGATTTGCAGAATTACAAGCTGCAACTACAGCAGGTCGAAGCTGCCCTGCTTACAGATCCGGAGAACTCGGAACTGCTCAAGCTGAAGGAGGAT CTGAACGAGGTGATCGAACTGACGAAGGATCTGATCAAGGCGCA CAGGAACCGGAACAGAAAAAGTCGTCGTACATTGAGCCGGCCACCAGCAGCTACTACGAGGGCGTCTCGGGAGCGGACAAGAAGCAGCCGAAGCCAGCGAAGGTATGGAAGGTGGGTGATAAATGTTCTGCTAAGTGGATTGAAGACGGTCAGTACTATGATGCTACCATAGAGTCGATCTCGGAAACGGGCGAGGTGAACATCGTGTTTGAGGCGTACCAGAACCGGAGCAACACCACGATTAGTGAGCTGAAGGAGCCAAAGACAC GGAACGAGGTGTTTCCCGCCAACAGTAACAAACGCATGCGTGCACAATCAGAAAGAATACCTGAAGAAAAAGAAGATGAAAAAAATCCAGCGATTCAAGGAGCTGGAGGAGGAACGGGAATGCGAGAAGAACAAATGGCTTCAGTTTACCGCCAAATCATCGAAAAAGTCCGGTGGCGTGAAACCGAAGAGTATTTTTGCTTCGCCCGAAAATGTGAACGGCCGGGTCGGTATCGGTACCTGCGGTGTGTCCGGCAAACCGATGACGGAGTTTTCACACGGAGAAAAGTACAGGAAAGGTGTTTAGGGA CGCTTTTGCTGGCACGAACGAGTTCTGGGGCTGAGAGCTTGAGTGCTCCACACGAATCGTTCTGCTTCTTTTTTCAATCGAAGTAAATTCTTGAT ]
[+] EMBL BM600835 [ CCGCGAAGCGATCGCTCCTGCTGCAGCTAAAAACTGAAAACAAACCCAATAAACTAGGCGAATCTCGGTTGATAGTACACCAAAATGGCAGACGATTTGCAGAATTACAAGCTGCAACTACAGCAGGTCGAAGCTGCCCTGCTAACAGATCCGGAGAACTCGGAACTGCTCAAGCTGAAGGAGGAC CTCAACGAGGTGATCGAACTGACGAAGGATCTGATCAAGGCGCAGCAGGAACCGGAACAGAAAAAGTCATCGTACATTGAGCCGGCCACCAGCAGCTACTACGAGGGCGTCTCGGGAGCGGACAAGAAGCAGTCAAAGCCAGCGAAGGTATGGAAGGTGGGTGATAAATGTTCTGCTAAGTGGATTGAAGACGGTCAGTACTATGATGCTACCATAGAGTCGATCTCGGAAACGGGCGAGGTGAACATCGTGTTTGAGGCGTACCAGAACCGGAGCAACACCACGATTAGTGAGCTGAAGGAGCCAAAGACACGGGAACGAGGTGTTTCCCGCCAACAGTAACAAACGCATGCG GCACAATCAGAAGGAATACCTGAAGAAAAAGAAGATGAAAAAAATCCAGCGATTCAAGG ]
[+] EMBL BM610586 [ CCGCGAAGCGATCGCTCCTGCTGCAGCTAAAAACTGAAAACAAACCCAATAAACTAGGCGAATCTCGGTTGATAGTACACCAAAATGGCAGACGATTTGCAGAATTACAAGCTGCAACTACAGCAGGTCGAAGCTGCCCTGCTAACAGATCCGGAGAACTCGGAACTGCTCAAGCTGAAGGAGGAC CTCAACGAGGTGATCGAACTGACGAAGGATCTGATCAAGGCGCAGCAGGAACCGGAACAGAAAAAGTCATCGTACATTGAGCCGGCCACCAGCAGCTACTACGAGGGCGTCTCGGGAGCGGACAAGAAGCAGTCAAAGCCAGCGAAGGTATGGAAGGTGGGTGATAAATGTTCTGCTAAGTGGATTGAAGACGGTCAGTACTATGATGCTACCATAGAGTCGATCTCGGAAACGGGCGAGGTGAACATCGTGTTTGAGGCGTACCAGAACCGGAGCAACACCACGATTAGTGAGCTGAAGGAGCCAAAGACACGGGAACGAGGTGTTTCCCGCCAACAGTAACAAACGCATGCG GCACAATCAGAAGGAATACCTGAAGAAAAAGAAGATGAAAAAAATCCAGCGATTCAAGGAGCTGGAAGAGGAACGGGAATGCGAGAAGAACAAATGGCTTCAGTTTACCG ]
[+] EMBL BM648396 [ CCGCGAAGCGATCGCTCCTGCTGCAGCTAAAAACTGAAAACAAACCCAATAAACTAGGCGAATCTCGGTTGATAGTACACCAAAATGGCAGACGATTTGCAGAATTACAAGCTGCAACTACAGCAGGTCGAAGCTGCCCTGCTTACAGATCCGGAGAACTCGGAACTGCTCAAGCTGAAGGAGGAC CTGAACGAGGTGATCGAACTGACGAAGGATCTGATCAAGGCGCAGCAGGAACCGGAACAGAAAAAGTCGTCGTACATTGAGCCGGCCACCAGCAGCTACTACGAGGGCGTCTCGGGAGCGGACAAGAAGCAGCCGAAGCCAGCGAAGGTATGGAAGGTGGGTGATAAATGTTCTGCTAAGTGGATTGAAGACGGTCAGTACTATGATGCTACCATAGAGTCGATCTCGGAAACGGGCGAGGTGAACATCGTGTTTGAGGCGTACCAGAACCGGAGCAACACCACGATTAGTGAGCTGAAGGAGCCAAAGACAC GGAACGAGGTGTTTCCCGCCAACAGTAACAAACGCATGCG GCACAATCAGAAAGAATACCTGAAGAAAAAGAAGATGAAAAAAATCCAGCGATTCAAGGAGCTGGAGGAGGAACGGGAATGCGAGAAGAACAAATGGCTTCAGTTTACCGCCAAATCATCGAAAAAGTCCGGTGGCGT ]
[+] EMBL CNS09JU1 [ GATCGCTCCTGTTGCAGCTAAAAACTGAAAACAAACCCAATAAACTAGGCGAATCTCGGTTAATAGTACACCAAAATGGCAGACGATTTGCAGAATTACAAGCTGCAACTACAGCAGGTCGAAGCTGCCCTGCTTACAGATCCGGAGAACTCGGAACTGCTCAAGCTGAAGGAGGAT CTGAACGAGGTGATCGAACTGACGAAGGATCTGATCAAGGCGCA CAGGAACCGGAACAGAAAAAGTCGTCGTACATTGAGCCGGCCACCAGCAGCTACTACGAGGGCGTCTCGGGAGCGGACAAGAAGCAGCCGAAGCCAGCGAAGGTATGGAAGGTGGGTGATAAATGTTCTGCTAAGTGGATTGAAGACGGTCAGTACTATGATGCTACCATAGAGTCGATCTCGGAAACGGGCGAGGTGAACATCGTGTTTGAGGCGTACCAGAACCGGAGCAACACCACGATTAGTGAGCTGAAGGAGCCAAAGACAC GGAACGAGGTGTTTCCCGCCAACAGTAACAAACGCATGCG GCACAATCAGAAAGAATACCTGAAGAAAAAGAAGATGAAAAAAATCCAGCGATTCAAGGAGCTGGAGGAGGAACGGGAATGCGAGAAGAACAAATGGCTTCAGTTTACCGCCAAATCATCGAAAAAGTCCGGTGGCGTGAAACCGAAGAGTATTTTTGCTTCGCCCGAAAATGTGAACGGCCGGGTCGGTATCGGTACCTGCGGTGTGTCCGGCAAACCGATGACGGAGTTTTCACACGGAGAAAAGTACAGGAAAGGTGTTTAGGGA CGCTTTTGCTGGCACGAACGAGTGCTGGGGCTGAGAGCTTGAGTGCTCCACACGAATCGTTCTGCTTCTTTTTTCAATCGAAGTAAATTCTTGATATGGCTTAGAAATTAAGATTACTGCACACACATACACACACACACACGCACATAGGCTTGTGTGCAGTTTGTCTTCACCTTTTTACCTAATCATTTTACACAGTGAA ]
[+] EMBL CNS09FKG [ TCCTGTTGCAGCTAAAAACTGAAAACAAACCCAATAAACTAGGCGAATCTCGGTTAATAGTACACCAAAATGGCAGACGATTTGCAGAATTACAAGCTGCAACTACAGCAGGTCGAAGCTGCCCTGCTTACAGATCCGGAGAACTCGGAACTGCTCAAGCTGAAGGAGGAT CTGAACGAGGTGATCGAACTGACGAAGGATCTGATCAAGG ]
[+] EMBL BX616634 [ gcTGCAGCTAAAAACTGAAAACAAACCCAATAAACTAGGCGAATCTCGGTTGATAGTACACCAAAATGGCAGACGATTTGCAGAATTACAAGCTGCAACTACAGCAGGTCGAAGCTGCCCTGCTAACAGATCCGGAGAACTCGGAACTGCTCAAGCTGAAGGAGGAC CTCAACGAGGTGATCGAACTGACGAAGGATCTGATCAAGGCGCAGCAGGAACCGGAACAGAAAAAGTCATCGTACATTGAGCCGGCCACCAGCAGCTACTACGAGGGCGTCTCGGGAGCGGACAAGAAGCAGTCAAAGCCAGCGAAGGTATGGAAGGTGGGTGATAAATGTTCTGCTAAGTGGATTGAAGACGGTCAGTACTATGATGCTACCATAGAGTCGATCTCGGAAACGGGCGAGGTGAACATCGTGTTTGAGGCGTACCAGAACCGGAGCAACACCACGATTAGTGAGCTGAAGGAGCCAAAGACAC GGAACGAGGTGTTTCCCGCCAACAGTAACAAACGCATGCG GCACAATCAGAAGGAATACCTGAAGAAAAAGAAGATGAAAAAAATCCAGCGATTCAAGGAGCTGGAAGAGGAACGGGAATGCGAGAAGAACAAATGGCTTCAGTTTACCGCCAAATCATCGAAAAAGTCCGGTGGCGTGAAACCGAAGAGTATTTTTGCTTCGCCCCGAAATGTGAACGGCCGGGTCGGTATCGGTACCTGCGGTGTGTCCGGCAAACCGATG ]
[-] EMBL CNS09JU2 [ TCGCACTGACGAAGGATCTGATCAAGGCGCAGCAGGAACCGGAACAGAAAAAGTCGTCGTACATTGAGCCGGCCACCAGCAGCTACTACGAGGGCGTCTCGGGAGCGGACAAGAAGCAGCCGAAGCCAGCGAAGGTATGGAAGGTGGGTGATAAATGTTCTGCTAAGTGGATTGAAGACGGTCAGTACTATGATGCTACCATAGAGTCGATCTCGGAAACGGGCGAGGTGAACATCGTGTTTGAGGCGTACCAGAACCGGAGCAACACCACGATTAGTGAGCTGAAGGAGCCAAAGACAC GGAACGAGGTGTTTCCCGCCAACAGTAACAAACGCATGCG GCACAATCAGAAAGAATACCTGAAGAAAAAGAAGATGAAAAAAATCCAGCGATTCAAGGAGCTGGAGGAGGAACGGGAATGCGAGAAGAACAAATGGCTTCAGTTTACCGCCAAATCATCGAAAAAGTCCGGTGGCGTGAAACCGAAGAGTATTTTTG TTCGCCCGAAAATGTGAACGGCCGGGTCGGTATCGGTA CTGCGGTGTGTCCGGCAAACCGATGACGGAGTTTTCACACGGAGAAAAGTACAGGAAAGGTGTTTAGGGA CGCTTTTGCTGGCACGAACGAGTGCTGGGGCTGAGAGCTTGAGTGCTCCACACGAATCGTTCTGCTTCTTTTTTCAATCGAAGTAAATTCTTGATATGGCTTAGAAATTAAGATTACTGCACACACATAAACACAAACAAACGCACATAGGCTTGTGTGCAGTTTGTCTTCACCTTTTTACCTAATCATTTTACACAGTGAAATGATCCGTCTTTGCCATCGCAGTTCCGGCAGAAACCCGTTTTTGCTGGTGAAGGATTTAAATTCCAGGACGAGCAATTTGGGTGCGTGTTGCGAGCATACTGAGTGGGTGGAAATTATCATTATGA ]
[-] EMBL CNS09KWV [ ACCGGAGCAACACCACGATTAGTGAGCTGAAGGAGCCAAAGACAC GGAACGAGGTGTTTCCCGCCAACAGTAACAAACGCATGCG GCACAATCAGAAAGAATACCTGAAGAAAAAGAAGATGAAAAAAATCCAGCGATTCAAGGAGCTGGAGGAGGGACGGGAATGCGAGAAGAACAAATGGCTTCAGTTTACCGCCAAATCATCGAAAAAGTCCGGTGGCGTGAAACCGAAGAGTATTTTTG TTCGCCCGAAAATGTGAACGGCCGGGTCGGTATCGGTA CTGCGGTGTGTCCGGCAAACCGATGACGGAGTTTTCACACGGAGAAAAGTACAGGAAAGGTGTTTAGGGAGCGCTTTTGCTGGCACGAACGAGTGCTGGGGCTGAGAGCTTGAGTGCTCCACACGAATCGTTCTGCTTCTTTTTTCAATCGAAGTAAATTCTTGATATGGCTTAGAAATTAAGATTACTGAACACACATACAAAAAAACAAACGCACATAGGCTTGTGTGCAGTTTGTCTTCACCTTTTTACCTAATCATTTTACACAGTGAAATGATCCGTCTTTGCCATCGCAGTTCCGGCAGAAACCCGTTTTTGCTGGTGAAGGATTTAAATTCCAGGACGAGCAATTTGGGTGCGTGTTGCGAGCATACTGAGTGGGTGGAAATTATCATTATGAACTACAAATAAA ]
[-] EMBL CNS094HM [ tTCGTTATCGGTA CTGCGGTGTGTCCGGCAAACCGATGACGGGGTTTTCACACGGAGAAAAGTACAGGAAAGGTGTTTAGGGA CGCTTTTGCTGGCACGAACGAGTGCTGGGGCTGAGAGCTTGAGTGCTCCACACGAATCGTTCTGCTTCTTTTTTCAACCGAAGTAAATTCTTGATATGGCTTAGAAATTAAGATTACTGCACACACATACACACACACACACGCACGTTGGCTTGTGTGCAGTTTGTCTTCACCTTTTTACCTAATCATTTTACACAGTGAAATGATCCGTCTTTGCCATCGCAGTTCCGGCAGAAACCCGTTTTTGCTGGTGAAGGATTTAAATTCCAGGACGAGCAATTTGGGTGCGTGTTGCGAGCATACTGAGTGGGTGGAAATTATCATTATGAACTACAAATAAAACGTTA]
consensusID : consensus_9064#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 688 fasta sequence
[CCGCGGACGCGTGGGCAAACCCAATAAACTAGGCGAATCTCGGTTGATAGTACACCAAAATGGCAGACGATTTGCAGAATTACAAGCTGCAACTACAGCAGGTCGAAGCTGCCCTGCTAACAGATCCGGAGAACTCGGAACTGCTCAAGCTGAAGGAGGACCTCAACGAGGTGATCGAACTGACGAAGGATCTGATCAAGGCGCAGCAGGAACCGGAACAGAAAAAGTCATCGTACATTGAGCCGGCCACCAGCAGCTACTACGAGGGCGTCTCGGGAGCGGACAAGAAGCAGTCAAAGCCAGCGAAGGTATGGAAGGTGGGTGATAAATGTTCTGCTAAGTGGATTGAAGACGGTCAGTACTATGATGCTACCATAGAGTCGATCTCGGAAACGGGCGAGGTGAACATCGTGTTTGAGGCGTACCAGAACCGGAGCAACACCACGATTAGTGAGCTGAAGGAGCCAAAGACACGGAACGAGGTGTTTCCCGCCAACAGTAACAAACGCATGCGGCACAATCAGAAGGAATACCTGAAGAAAAAGAAGATGAAAAAAATCCAGCGATTCAAGGAGCTGGAAGAGGAACGGGAATGCGAGAAGAACAAATGGCTTCAGTTTACCGCCAAATCATCGAAAAAGTCCGGTGGCGTGAAACCGAAGAGTATTTTTGCTTCGCCCGAAAATGT]
[+] EMBL BM583837 [CCGCGGACGCGTGGGCAAACCCAATAAACTAGGCGAATCTCGGTTGATAGTACACCAAAATGGCAGACGATTTGCAGAATTACAAGCTGCAACTACAGCAGGTCGAAGCTGCCCTGCTAACAGATCCGGAGAACTCGGAACTGCTCAAGCTGAAGGAGGACCTCAACGAGGTGATCGAACTGACGAAGGATCTGATCAAGGCGCAGCAGGAACCGGAACAGAAAAAGTCATCGTACATTGAGCCGGCCACCAGCAGCTACTACGAGGGCGTCTCGGGAGCGGACAAGAAGCAGTCAAAGCCAGCGAAGGTATGGAAGGTGGGTGATAAATGTTCTGCTAAGTGGATTGAAGACGGTCAGTACTATGATGCTACCATAGAGTCGATCTCGGAAACGGGCGAGGTGAACATCGTGTTTGAGGCGTACCAGAACCGGAGCAACACCACGATTAGTGAGCTGAAGGAGCCAAAGACACGGAACGAGGTGTTTCCCGCCAACAGTAACAAACGCATGCGGCACAATCAGAAGGAATACCTGAAGAAAAAGAAGATGAAAAAAATCCAGCGATTCAAGGAGCTGGAAGAGGAACGGGAATGCGAGAAGAACAAATGGCTTCAGTTTACCGCCAAATCATCGAAAAAGTCCGGTGGCGTGAAACCGAAGAGTATTTTTGCTTCGCCCGAAAATGT]
consensusID : consensus_9064#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 526 fasta sequence
[GCCCCGGGTTNTAAGCGATCGCTCCTGGCTGCNGCTGAAAACTGAAATTAAACCCAATAAACTAGGCGAATCTCGGTTGATAGTACCTCAAAATGGCAGACGATTTGCAGAATTACAAGCTGCAACTACAGCAGGTCGAAGCTGCCTGCTAACAGATCCGGAGAACTCGGAACTGCTCAAGCTGAAGGCAGGACCTGAACGAGGTGATCGAACTGACGAAGGATCTGATCAAGGCGCAGCAGGAACCGGAACAGAAAAACGTCATCGTACATTGAGCCGGCCACCAGCAGCATACTACGAGGGCGTCTCGNGGAGACGGACAAGAAGCAGTCAAACGCCAGCGAAGGTACTGGAAGGTGGGTGATAAACTGTNCTGCNTAAGTGGACTTGNAGACGGTCAGGTACTATGATGCTACCATAGAGTCGATCTCGTAAACGGGCTGACGTGAACATCGTGTATGAGGCTGTACCAGAACCGGTAGCAACACCACGATTACGTGAGCTGAAGGAGCCAAAAGACAAGGAA]
[+] EMBL AL697604 [GCCCCGGGTTNTAAGCGATCGCTCCTGGCTGCNGCTGAAAACTGAAATTAAACCCAATAAACTAGGCGAATCTCGGTTGATAGTACCTCAAAATGGCAGACGATTTGCAGAATTACAAGCTGCAACTACAGCAGGTCGAAGCTGCCTGCTAACAGATCCGGAGAACTCGGAACTGCTCAAGCTGAAGGCAGGACCTGAACGAGGTGATCGAACTGACGAAGGATCTGATCAAGGCGCAGCAGGAACCGGAACAGAAAAACGTCATCGTACATTGAGCCGGCCACCAGCAGCATACTACGAGGGCGTCTCGNGGAGACGGACAAGAAGCAGTCAAACGCCAGCGAAGGTACTGGAAGGTGGGTGATAAACTGTNCTGCNTAAGTGGACTTGNAGACGGTCAGGTACTATGATGCTACCATAGAGTCGATCTCGTAAACGGGCTGACGTGAACATCGTGTATGAGGCTGTACCAGAACCGGTAGCAACACCACGATTACGTGAGCTGAAGGAGCCAAAAGACAAGGAA]
consensusID : consensus_9064#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 488 fasta sequence
[GCAGCTAAAAACTGAAAACAAACCCAATAAACTAGGCGAATCTCGGTTGATAGTACACCAAAATGGCAGACGATTTGCAGAATTACAAGCTGCAACTACAGCAGGTCGAAGCTGCCCTGCTAACAGATCCGGAGAACTCGGAACTGCTCAAGCTGAAGGAGCCAAAGACACGGAACGAGGTGTTTCCCGCCAACAGTAACAAACGCATGCGGCACAATCAGAAGGAATACCTGAAGAAAAAGAAGATGAAAAAAATCCAGCGATTCAAGGAGCTGGAAGAGGAACGGGAATGCGAGAAGAACAAATGGCTTCAGTTTACCGCCAAATCATCGAAAAAGTCCGGTGGCGTGAAACCGAAGAGTATTTTTGCTTCGCCCGAAAATGTGAACGGCCGGGTCGGTATCGGTACCTGCGGTGTGTCCGGCAAACCGATGACGGAGTTTTCACACGGAGAAAAGTACAGGAAAGGTGTTTAGGGACGTTTTTGC]
[+] EMBL BX610993 [GCAGCTAAAAACTGAAAACAAACCCAATAAACTAGGCGAATCTCGGTTGATAGTACACCAAAATGGCAGACGATTTGCAGAATTACAAGCTGCAACTACAGCAGGTCGAAGCTGCCCTGCTAACAGATCCGGAGAACTCGGAACTGCTCAAGCTGAAGGAGCCAAAGACACGGAACGAGGTGTTTCCCGCCAACAGTAACAAACGCATGCGGCACAATCAGAAGGAATACCTGAAGAAAAAGAAGATGAAAAAAATCCAGCGATTCAAGGAGCTGGAAGAGGAACGGGAATGCGAGAAGAACAAATGGCTTCAGTTTACCGCCAAATCATCGAAAAAGTCCGGTGGCGTGAAACCGAAGAGTATTTTTGCTTCGCCCGAAAATGTGAACGGCCGGGTCGGTATCGGTACCTGCGGTGTGTCCGGCAAACCGATGACGGAGTTTTCACACGGAGAAAAGTACAGGAAAGGTGTTTAGGGACGTTTTTGC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9064#1 ---------------------------------------CCGCGGACGCGTGGG--CAAA 19
consensus_9064#2 --------GCCCCGGGTTNTAAGCGATCGCTCCTGGCTGCNGCTGAAAACTGAAATTAAA 52
consensus_9064#0 AAGAAAATGTTGCTGCCGCGAAGCGATCGCTCCTG-TTGCAGCTAAAAACTGAAAACAAA 59
consensus_9064#3 --------------------------------------GCAGCTAAAAACTGAAAACAAA 22
* ** * ** ***
consensus_9064#1 CCCAATAAACTAGGCGAATCTCGGTTGATAGTACACCAAAATGGCAGACGATTTGCAGAA 79
consensus_9064#2 CCCAATAAACTAGGCGAATCTCGGTTGATAGTACCTCAAAATGGCAGACGATTTGCAGAA 112
consensus_9064#0 CCCAATAAACTAGGCGAATCTCGGTTAATAGTACACCAAAATGGCAGACGATTTGCAGAA 119
consensus_9064#3 CCCAATAAACTAGGCGAATCTCGGTTGATAGTACACCAAAATGGCAGACGATTTGCAGAA 82
************************** ******* ************************
consensus_9064#1 TTACAAGCTGCAACTACAGCAGGTCGAAGCTGCCCTGCTAACAGATCCGGAGAACTCGGA 139
consensus_9064#2 TTACAAGCTGCAACTACAGCAGGTCGAAGCTGCC-TGCTAACAGATCCGGAGAACTCGGA 171
consensus_9064#0 TTACAAGCTGCAACTACAGCAGGTCGAAGCTGCCCTGCTTACAGATCCGGAGAACTCGGA 179
consensus_9064#3 TTACAAGCTGCAACTACAGCAGGTCGAAGCTGCCCTGCTAACAGATCCGGAGAACTCGGA 142
********************************** **** ********************
consensus_9064#1 ACTGCTCAAGCTGAAGG-----AGGAC-CTCAACGAGGTGAT-----CGAAC--TGACGA 186
consensus_9064#2 ACTGCTCAAGCTGAAGGC----AGGAC-CTGAACGAGGTGAT-----CGAAC--TGACGA 219
consensus_9064#0 ACTGCTCAAGCTGAAGG-----AGGAC-CTGAACGAGGTGAT-----CGAAC--TGACGA 226
consensus_9064#3 ACTGCTCAAGCTGAAGGAGCCAAAGACACGGAACGAGGTGTTTCCCGCCAACAGTAACAA 202
***************** * *** * ********* * * *** * ** *
consensus_9064#1 AGG-ATCTGATCAAGGCGCAGCAGGAACCGGAACAGAAAAA-GTCATCGTACATTGAGCC 244
consensus_9064#2 AGG-ATCTGATCAAGGCGCAGCAGGAACCGGAACAGAAAAACGTCATCGTACATTGAGCC 278
consensus_9064#0 AGG-ATCTGATCAAGGCGCAGCAGGAACCGGAACAGAAAAA-GTCGTCGTACATTGAGCC 284
consensus_9064#3 ACGCATGCGGCACAATCAGAAGGAATACCTGAAGAAAAAGAAGATGAAAAAAATCCAGCG 262
* * ** * * * * *** *** * *** * * * ** ***
consensus_9064#1 GGCCACCAGCAGC-TACTACGAGGGCGTCTCGGGAG--CGGACAAGAAGCAGTCAAA-GC 300
consensus_9064#2 GGCCACCAGCAGCATACTACGAGGGCGTCTCGNGGAGACGGACAAGAAGCAGTCAAACGC 338
consensus_9064#0 GGCCACCAGCAGC-TACTACGAGGGCGTCTCGGGAG--CGGACAAGAAGCAGCCGAA-GC 340
consensus_9064#3 ATTCA--AGGAGC-TGGAAGAGGAACGGGAATGCGAGAAGAACAAATGGCT-TCAGTTTA 318
** ** *** * * * ** * **** ** *
consensus_9064#1 CAGCGAAGGTA-TGGAAGGTGGGTGATAAA-TGTTCTGCT-AAGTGGA-TTGAAGACGGT 356
consensus_9064#2 CAGCGAAGGTACTGGAAGGTGGGTGATAAACTGTNCTGCNTAAGTGGACTTGNAGACGGT 398
consensus_9064#0 CAGCGAAGGTA-TGGAAGGTGGGTGATAAA-TGTTCTGCT-AAGTGGA-TTGAAGACGGT 396
consensus_9064#3 CCGCCAAATCA-TCGAAAAAGTCCGGTGGC--GTGAAACCGAAGAGTATTTTTGCTTCGC 375
* ** ** * * *** * * * ** * *** * * ** *
consensus_9064#1 CAG-TACTATGATGCTACCATAGAGTCGATCTCGGAAACGGGC-GAGGTGAACATCGTGT 414
consensus_9064#2 CAGGTACTATGATGCTACCATAGAGTCGATCTCGTAAACGGGCTGACGTGAACATCGTGT 458
consensus_9064#0 CAG-TACTATGATGCTACCATAGAGTCGATCTCGGAAACGGGC-GAGGTGAACATCGTGT 454
consensus_9064#3 CCGAAAATGTGA----ACGGCCGGGTCGGTATCG-GTACCTGC-GGTGTGTCCGGCAAAC 429
* * * * *** ** * **** * *** ** ** * *** * *
consensus_9064#1 TTGAGGC-GTACCAGAACCGG-AGCAACACCACGATTA-GTGAGCTGAAGGAGCCAAA-G 470
consensus_9064#2 ATGAGGCTGTACCAGAACCGGTAGCAACACCACGATTACGTGAGCTGAAGGAGCCAAAAG 518
consensus_9064#0 TTGAGGC-GTACCAGAACCGG-AGCAACACCACGATTA-GTGAGCTGAAGGAGCCAAA-G 510
consensus_9064#3 CGATGACGGAGTTTTCACACGGAGAAA-AGTACAGGAA-AGGTGTTTAGGGACGTTTTTG 487
* * * ** * ** ** * ** * * * * * *** *
consensus_9064#1 ACACGGAACGAGGTGTTTCCCGCCAACAGTAACAAACGCATGCGGCACAATCAGAAGGAA 530
consensus_9064#2 ACAAGGAA---------------------------------------------------- 526
consensus_9064#0 ACACGGAACGAGGTGTTTCCCGCCAACAGTAACAAACGCATGCGGCACAATCAGAAAGAA 570
consensus_9064#3 C----------------------------------------------------------- 488
consensus_9064#1 TACCTGAAGAAAAAGAAGATGAAAAAAATCCAGCGATTCAAGGAGCTGGAAGAGGAACGG 590
consensus_9064#2 ------------------------------------------------------------
consensus_9064#0 TACCTGAAGAAAAAGAAGATGAAAAAAATCCAGCGATTCAAGGAGCTGGAGGAGGAACGG 630
consensus_9064#3 ------------------------------------------------------------
consensus_9064#1 GAATGCGAGAAGAACAAATGGCTTCAGTTTACCGCCAAATCATCGAAAAAGTCCGGTGGC 650
consensus_9064#2 ------------------------------------------------------------
consensus_9064#0 GAATGCGAGAAGAACAAATGGCTTCAGTTTACCGCCAAATCATCGAAAAAGTCCGGTGGC 690
consensus_9064#3 ------------------------------------------------------------
consensus_9064#1 GTGAAACCGAAGAGTATTTTTGCTTCGCCCGAAAATGT---------------------- 688
consensus_9064#2 ------------------------------------------------------------
consensus_9064#0 GTGAAACCGAAGAGTATTTTTGCTTCGCCCGAAAATGTGAACGGCCGGGTCGGTATCGGT 750
consensus_9064#3 ------------------------------------------------------------
consensus_9064#1 ------------------------------------------------------------
consensus_9064#2 ------------------------------------------------------------
consensus_9064#0 ACCTGCGGTGTGTCCGGCAAACCGATGACGGAGTTTTCACACGGAGAAAAGTACAGGAAA 810
consensus_9064#3 ------------------------------------------------------------
consensus_9064#1 ------------------------------------------------------------
consensus_9064#2 ------------------------------------------------------------
consensus_9064#0 GGTGTTTAGGGACGCTTTTGCTGGCACGAACGAGTGCTGGGGCTGAGAGCTTGAGTGCTC 870
consensus_9064#3 ------------------------------------------------------------
consensus_9064#1 ------------------------------------------------------------
consensus_9064#2 ------------------------------------------------------------
consensus_9064#0 CACACGAATCGTTCTGCTTCTTTTTTCAATCGAAGTAAATTCTTGATATGGCTTAGAAAT 930
consensus_9064#3 ------------------------------------------------------------
consensus_9064#1 ------------------------------------------------------------
consensus_9064#2 ------------------------------------------------------------
consensus_9064#0 TAAGATTACTGCACACACATACACACACACACACGCACATAGGCTTGTGTGCAGTTTGTC 990
consensus_9064#3 ------------------------------------------------------------
consensus_9064#1 ------------------------------------------------------------
consensus_9064#2 ------------------------------------------------------------
consensus_9064#0 TTCACCTTTTTACCTAATCATTTTACACAGTGAAATGATCCGTCTTTGCCATCGCAGTTC 1050
consensus_9064#3 ------------------------------------------------------------
consensus_9064#1 ------------------------------------------------------------
consensus_9064#2 ------------------------------------------------------------
consensus_9064#0 CGGCAGAAACCCGTTTTTGCTGGTGAAGGATTTAAATTCCAGGACGAGCAATTTGGGTGC 1110
consensus_9064#3 ------------------------------------------------------------
consensus_9064#1 -----------------------------------------------------------
consensus_9064#2 -----------------------------------------------------------
consensus_9064#0 GTGTTGCGAGCATACTGAGTGGGTGGAAATTATCATTATGAACTACAAATAAAACGTTA 1169
consensus_9064#3 -----------------------------------------------------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||