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Anopheles gambiae
cluster # 9064 cluster # 9064       Sequences # 14       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9064#0 length = 1169 sequences # 11  
consensus_9064#1 length = 688 sequences # 1  
consensus_9064#2 length = 526 sequences # 1  
consensus_9064#3 length = 488 sequences # 1  

consensusID : consensus_9064#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 11
consensus length = 1169
fasta sequence
                              [AAGAAAATGTTGCTGCCGCGAAGCGATCGCTCCTGTTGCAGCTAAAAACTGAAAACAAACCCAATAAACTAGGCGAATCTCGGTTAATAGTACACCAAAATGGCAGACGATTTGCAGAATTACAAGCTGCAACTACAGCAGGTCGAAGCTGCCCTGCTTACAGATCCGGAGAACTCGGAACTGCTCAAGCTGAAGGAGGAC-CTGAACGAGGTGATCGAACTGACGAAGGATCTGATCAAGGCGCAGCAGGAACCGGAACAGAAAAAGTCGTCGTACATTGAGCCGGCCACCAGCAGCTACTACGAGGGCGTCTCGGGAGCGGACAAGAAGCAGCCGAAGCCAGCGAAGGTATGGAAGGTGGGTGATAAATGTTCTGCTAAGTGGATTGAAGACGGTCAGTACTATGATGCTACCATAGAGTCGATCTCGGAAACGGGCGAGGTGAACATCGTGTTTGAGGCGTACCAGAACCGGAGCAACACCACGATTAGTGAGCTGAAGGAGCCAAAGACAC-GGAACGAGGTGTTTCCCGCCAACAGTAACAAACGCATGCG-GCACAATCAGAAAGAATACCTGAAGAAAAAGAAGATGAAAAAAATCCAGCGATTCAAGGAGCTGGAGGAGGAACGGGAATGCGAGAAGAACAAATGGCTTCAGTTTACCGCCAAATCATCGAAAAAGTCCGGTGGCGTGAAACCGAAGAGTATTTTTGCTTCGCCCGAAAATGTGAACGGCCGGGTCGGTATCGGTACCTGCGGTGTGTCCGGCAAACCGATGACGGAGTTTTCACACGGAGAAAAGTACAGGAAAGGTGTTTAGGGA-CGCTTTTGCTGGCACGAACGAGTGCTGGGGCTGAGAGCTTGAGTGCTCCACACGAATCGTTCTGCTTCTTTTTTCAATCGAAGTAAATTCTTGATATGGCTTAGAAATTAAGATTACTGCACACACATACACACACACACACGCACATAGGCTTGTGTGCAGTTTGTCTTCACCTTTTTACCTAATCATTTTACACAGTGAAATGATCCGTCTTTGCCATCGCAGTTCCGGCAGAAACCCGTTTTTGCTGGTGAAGGATTTAAATTCCAGGACGAGCAATTTGGGTGCGTGTTGCGAGCATACTGAGTGGGTGGAAATTATCATTATGAACTACAAATAAAACGTTA]

[+] EMBL CNS094HL             [AAGAAAATGTTGCTGTATCGAAGCGATCGCTCCTGTTGCAGCTAAAAACTGAAAACAAACCCAATAAACTAGGCGAATCTCAGTTAATAGTACACCAAAATGGCAGACGATTTGCAGAATTACAAGCTGCAACTACAGCAGGTCGAAGCTGCCCTGCTTACAGATCCGGAGAACTCGGAACTGCTCAAGCTGAAGGA GACTCTGAACGAGGTGATCGAACTGACGAAGGATCTGATCAAGGCGCA CAGGAACCGGAACAGAAAAAGTCGTCGTACATTGAGCCGGCCACCAGCAGCTACTACGAGGGCGTCTCGGGAGCGGACAAGAAGCAGCCGAAGCCAGCGAAGGTATGGAAGGTGGGTGATAAATGTTCTGCTAAGTGGATTGAAGACGGTCAGTACTATGATGCTACCATAGAGTCGATCTCGGAAACGGGCGAGGTGAACATCGTGTTTGAGGCGTACCAGAACCGGAGCAACACCACGATTAGTGAGCTGAAGGAGCCAAAGACAC GGAACGAGGTGTTTCCCGCCAACAGTAACAAACGCATGCG GCACAATCAGAAAGAATACCTGAAGAAAAAGAAGATGAAAAAAATCCAGCGATTCAAGGAGCTGGAGGAGGAACGGGAATGCGAGAAGAACAAATGGCTTCAGTTTACCGCCAAATCATCGAAAAAGTCCGGTGGCGTGAAACCGAAGAGTATTTTTGCTTCGCCCGAAAATGTGAACGGCCGGGTCGGTATCGGTACCTGCGGTGTGTCCGGCAAACCGATGACGGGGTTTTCACACGGAGAAAAGTACAGGAAAGGTGTTTAGGGA CGCTTTTGCTGGCACGAACGAGTGCTGGGGCTGAGAGCTTGAGTGCTCCACACGAATCGTTCTGCTTCTTTTTTCAATCGAAGTAAATTCTTGATATGGCTTAGAAATTAAGATTACTGCACACACATACACACACACACACGCACATAGGgct                                                                                                                                                                                                 ]
[+] EMBL CNS09KWU             [     gATGTTGCTGTATCGAAGCGATCGCTCCTGTTGCAGCTAAAAACTGAAAACAAACCCAATAAACTAGGCGAATCTCGGTTAATAGTACACCAAAATGGCAGACGATTTGCAGAATTACAAGCTGCAACTACAGCAGGTCGAAGCTGCCCTGCTTACAGATCCGGAGAACTCGGAACTGCTCAAGCTGAAGGAGGAT CTGAACGAGGTGATCGAACTGACGAAGGATCTGATCAAGGCGCA CAGGAACCGGAACAGAAAAAGTCGTCGTACATTGAGCCGGCCACCAGCAGCTACTACGAGGGCGTCTCGGGAGCGGACAAGAAGCAGCCGAAGCCAGCGAAGGTATGGAAGGTGGGTGATAAATGTTCTGCTAAGTGGATTGAAGACGGTCAGTACTATGATGCTACCATAGAGTCGATCTCGGAAACGGGCGAGGTGAACATCGTGTTTGAGGCGTACCAGAACCGGAGCAACACCACGATTAGTGAGCTGAAGGAGCCAAAGACAC GGAACGAGGTGTTTCCCGCCAACAGTAACAAACGCATGCGTGCACAATCAGAAAGAATACCTGAAGAAAAAGAAGATGAAAAAAATCCAGCGATTCAAGGAGCTGGAGGAGGAACGGGAATGCGAGAAGAACAAATGGCTTCAGTTTACCGCCAAATCATCGAAAAAGTCCGGTGGCGTGAAACCGAAGAGTATTTTTGCTTCGCCCGAAAATGTGAACGGCCGGGTCGGTATCGGTACCTGCGGTGTGTCCGGCAAACCGATGACGGAGTTTTCACACGGAGAAAAGTACAGGAAAGGTGTTTAGGGA CGCTTTTGCTGGCACGAACGAGTTCTGGGGCTGAGAGCTTGAGTGCTCCACACGAATCGTTCTGCTTCTTTTTTCAATCGAAGTAAATTCTTGAT                                                                                                                                                                                                                                                            ]
[+] EMBL BM600835             [               CCGCGAAGCGATCGCTCCTGCTGCAGCTAAAAACTGAAAACAAACCCAATAAACTAGGCGAATCTCGGTTGATAGTACACCAAAATGGCAGACGATTTGCAGAATTACAAGCTGCAACTACAGCAGGTCGAAGCTGCCCTGCTAACAGATCCGGAGAACTCGGAACTGCTCAAGCTGAAGGAGGAC CTCAACGAGGTGATCGAACTGACGAAGGATCTGATCAAGGCGCAGCAGGAACCGGAACAGAAAAAGTCATCGTACATTGAGCCGGCCACCAGCAGCTACTACGAGGGCGTCTCGGGAGCGGACAAGAAGCAGTCAAAGCCAGCGAAGGTATGGAAGGTGGGTGATAAATGTTCTGCTAAGTGGATTGAAGACGGTCAGTACTATGATGCTACCATAGAGTCGATCTCGGAAACGGGCGAGGTGAACATCGTGTTTGAGGCGTACCAGAACCGGAGCAACACCACGATTAGTGAGCTGAAGGAGCCAAAGACACGGGAACGAGGTGTTTCCCGCCAACAGTAACAAACGCATGCG GCACAATCAGAAGGAATACCTGAAGAAAAAGAAGATGAAAAAAATCCAGCGATTCAAGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL BM610586             [               CCGCGAAGCGATCGCTCCTGCTGCAGCTAAAAACTGAAAACAAACCCAATAAACTAGGCGAATCTCGGTTGATAGTACACCAAAATGGCAGACGATTTGCAGAATTACAAGCTGCAACTACAGCAGGTCGAAGCTGCCCTGCTAACAGATCCGGAGAACTCGGAACTGCTCAAGCTGAAGGAGGAC CTCAACGAGGTGATCGAACTGACGAAGGATCTGATCAAGGCGCAGCAGGAACCGGAACAGAAAAAGTCATCGTACATTGAGCCGGCCACCAGCAGCTACTACGAGGGCGTCTCGGGAGCGGACAAGAAGCAGTCAAAGCCAGCGAAGGTATGGAAGGTGGGTGATAAATGTTCTGCTAAGTGGATTGAAGACGGTCAGTACTATGATGCTACCATAGAGTCGATCTCGGAAACGGGCGAGGTGAACATCGTGTTTGAGGCGTACCAGAACCGGAGCAACACCACGATTAGTGAGCTGAAGGAGCCAAAGACACGGGAACGAGGTGTTTCCCGCCAACAGTAACAAACGCATGCG GCACAATCAGAAGGAATACCTGAAGAAAAAGAAGATGAAAAAAATCCAGCGATTCAAGGAGCTGGAAGAGGAACGGGAATGCGAGAAGAACAAATGGCTTCAGTTTACCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL BM648396             [               CCGCGAAGCGATCGCTCCTGCTGCAGCTAAAAACTGAAAACAAACCCAATAAACTAGGCGAATCTCGGTTGATAGTACACCAAAATGGCAGACGATTTGCAGAATTACAAGCTGCAACTACAGCAGGTCGAAGCTGCCCTGCTTACAGATCCGGAGAACTCGGAACTGCTCAAGCTGAAGGAGGAC CTGAACGAGGTGATCGAACTGACGAAGGATCTGATCAAGGCGCAGCAGGAACCGGAACAGAAAAAGTCGTCGTACATTGAGCCGGCCACCAGCAGCTACTACGAGGGCGTCTCGGGAGCGGACAAGAAGCAGCCGAAGCCAGCGAAGGTATGGAAGGTGGGTGATAAATGTTCTGCTAAGTGGATTGAAGACGGTCAGTACTATGATGCTACCATAGAGTCGATCTCGGAAACGGGCGAGGTGAACATCGTGTTTGAGGCGTACCAGAACCGGAGCAACACCACGATTAGTGAGCTGAAGGAGCCAAAGACAC GGAACGAGGTGTTTCCCGCCAACAGTAACAAACGCATGCG GCACAATCAGAAAGAATACCTGAAGAAAAAGAAGATGAAAAAAATCCAGCGATTCAAGGAGCTGGAGGAGGAACGGGAATGCGAGAAGAACAAATGGCTTCAGTTTACCGCCAAATCATCGAAAAAGTCCGGTGGCGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CNS09JU1             [                        GATCGCTCCTGTTGCAGCTAAAAACTGAAAACAAACCCAATAAACTAGGCGAATCTCGGTTAATAGTACACCAAAATGGCAGACGATTTGCAGAATTACAAGCTGCAACTACAGCAGGTCGAAGCTGCCCTGCTTACAGATCCGGAGAACTCGGAACTGCTCAAGCTGAAGGAGGAT CTGAACGAGGTGATCGAACTGACGAAGGATCTGATCAAGGCGCA CAGGAACCGGAACAGAAAAAGTCGTCGTACATTGAGCCGGCCACCAGCAGCTACTACGAGGGCGTCTCGGGAGCGGACAAGAAGCAGCCGAAGCCAGCGAAGGTATGGAAGGTGGGTGATAAATGTTCTGCTAAGTGGATTGAAGACGGTCAGTACTATGATGCTACCATAGAGTCGATCTCGGAAACGGGCGAGGTGAACATCGTGTTTGAGGCGTACCAGAACCGGAGCAACACCACGATTAGTGAGCTGAAGGAGCCAAAGACAC GGAACGAGGTGTTTCCCGCCAACAGTAACAAACGCATGCG GCACAATCAGAAAGAATACCTGAAGAAAAAGAAGATGAAAAAAATCCAGCGATTCAAGGAGCTGGAGGAGGAACGGGAATGCGAGAAGAACAAATGGCTTCAGTTTACCGCCAAATCATCGAAAAAGTCCGGTGGCGTGAAACCGAAGAGTATTTTTGCTTCGCCCGAAAATGTGAACGGCCGGGTCGGTATCGGTACCTGCGGTGTGTCCGGCAAACCGATGACGGAGTTTTCACACGGAGAAAAGTACAGGAAAGGTGTTTAGGGA CGCTTTTGCTGGCACGAACGAGTGCTGGGGCTGAGAGCTTGAGTGCTCCACACGAATCGTTCTGCTTCTTTTTTCAATCGAAGTAAATTCTTGATATGGCTTAGAAATTAAGATTACTGCACACACATACACACACACACACGCACATAGGCTTGTGTGCAGTTTGTCTTCACCTTTTTACCTAATCATTTTACACAGTGAA                                                                                                                                                 ]
[+] EMBL CNS09FKG             [                              TCCTGTTGCAGCTAAAAACTGAAAACAAACCCAATAAACTAGGCGAATCTCGGTTAATAGTACACCAAAATGGCAGACGATTTGCAGAATTACAAGCTGCAACTACAGCAGGTCGAAGCTGCCCTGCTTACAGATCCGGAGAACTCGGAACTGCTCAAGCTGAAGGAGGAT CTGAACGAGGTGATCGAACTGACGAAGGATCTGATCAAGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL BX616634             [                                  gcTGCAGCTAAAAACTGAAAACAAACCCAATAAACTAGGCGAATCTCGGTTGATAGTACACCAAAATGGCAGACGATTTGCAGAATTACAAGCTGCAACTACAGCAGGTCGAAGCTGCCCTGCTAACAGATCCGGAGAACTCGGAACTGCTCAAGCTGAAGGAGGAC CTCAACGAGGTGATCGAACTGACGAAGGATCTGATCAAGGCGCAGCAGGAACCGGAACAGAAAAAGTCATCGTACATTGAGCCGGCCACCAGCAGCTACTACGAGGGCGTCTCGGGAGCGGACAAGAAGCAGTCAAAGCCAGCGAAGGTATGGAAGGTGGGTGATAAATGTTCTGCTAAGTGGATTGAAGACGGTCAGTACTATGATGCTACCATAGAGTCGATCTCGGAAACGGGCGAGGTGAACATCGTGTTTGAGGCGTACCAGAACCGGAGCAACACCACGATTAGTGAGCTGAAGGAGCCAAAGACAC GGAACGAGGTGTTTCCCGCCAACAGTAACAAACGCATGCG GCACAATCAGAAGGAATACCTGAAGAAAAAGAAGATGAAAAAAATCCAGCGATTCAAGGAGCTGGAAGAGGAACGGGAATGCGAGAAGAACAAATGGCTTCAGTTTACCGCCAAATCATCGAAAAAGTCCGGTGGCGTGAAACCGAAGAGTATTTTTGCTTCGCCCCGAAATGTGAACGGCCGGGTCGGTATCGGTACCTGCGGTGTGTCCGGCAAACCGATG                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CNS09JU2             [                                                                                                                                                                                                                       TCGCACTGACGAAGGATCTGATCAAGGCGCAGCAGGAACCGGAACAGAAAAAGTCGTCGTACATTGAGCCGGCCACCAGCAGCTACTACGAGGGCGTCTCGGGAGCGGACAAGAAGCAGCCGAAGCCAGCGAAGGTATGGAAGGTGGGTGATAAATGTTCTGCTAAGTGGATTGAAGACGGTCAGTACTATGATGCTACCATAGAGTCGATCTCGGAAACGGGCGAGGTGAACATCGTGTTTGAGGCGTACCAGAACCGGAGCAACACCACGATTAGTGAGCTGAAGGAGCCAAAGACAC GGAACGAGGTGTTTCCCGCCAACAGTAACAAACGCATGCG GCACAATCAGAAAGAATACCTGAAGAAAAAGAAGATGAAAAAAATCCAGCGATTCAAGGAGCTGGAGGAGGAACGGGAATGCGAGAAGAACAAATGGCTTCAGTTTACCGCCAAATCATCGAAAAAGTCCGGTGGCGTGAAACCGAAGAGTATTTTTG TTCGCCCGAAAATGTGAACGGCCGGGTCGGTATCGGTA CTGCGGTGTGTCCGGCAAACCGATGACGGAGTTTTCACACGGAGAAAAGTACAGGAAAGGTGTTTAGGGA CGCTTTTGCTGGCACGAACGAGTGCTGGGGCTGAGAGCTTGAGTGCTCCACACGAATCGTTCTGCTTCTTTTTTCAATCGAAGTAAATTCTTGATATGGCTTAGAAATTAAGATTACTGCACACACATAAACACAAACAAACGCACATAGGCTTGTGTGCAGTTTGTCTTCACCTTTTTACCTAATCATTTTACACAGTGAAATGATCCGTCTTTGCCATCGCAGTTCCGGCAGAAACCCGTTTTTGCTGGTGAAGGATTTAAATTCCAGGACGAGCAATTTGGGTGCGTGTTGCGAGCATACTGAGTGGGTGGAAATTATCATTATGA                  ]
[-] EMBL CNS09KWV             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ACCGGAGCAACACCACGATTAGTGAGCTGAAGGAGCCAAAGACAC GGAACGAGGTGTTTCCCGCCAACAGTAACAAACGCATGCG GCACAATCAGAAAGAATACCTGAAGAAAAAGAAGATGAAAAAAATCCAGCGATTCAAGGAGCTGGAGGAGGGACGGGAATGCGAGAAGAACAAATGGCTTCAGTTTACCGCCAAATCATCGAAAAAGTCCGGTGGCGTGAAACCGAAGAGTATTTTTG TTCGCCCGAAAATGTGAACGGCCGGGTCGGTATCGGTA CTGCGGTGTGTCCGGCAAACCGATGACGGAGTTTTCACACGGAGAAAAGTACAGGAAAGGTGTTTAGGGAGCGCTTTTGCTGGCACGAACGAGTGCTGGGGCTGAGAGCTTGAGTGCTCCACACGAATCGTTCTGCTTCTTTTTTCAATCGAAGTAAATTCTTGATATGGCTTAGAAATTAAGATTACTGAACACACATACAAAAAAACAAACGCACATAGGCTTGTGTGCAGTTTGTCTTCACCTTTTTACCTAATCATTTTACACAGTGAAATGATCCGTCTTTGCCATCGCAGTTCCGGCAGAAACCCGTTTTTGCTGGTGAAGGATTTAAATTCCAGGACGAGCAATTTGGGTGCGTGTTGCGAGCATACTGAGTGGGTGGAAATTATCATTATGAACTACAAATAAA      ]
[-] EMBL CNS094HM             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     tTCGTTATCGGTA CTGCGGTGTGTCCGGCAAACCGATGACGGGGTTTTCACACGGAGAAAAGTACAGGAAAGGTGTTTAGGGA CGCTTTTGCTGGCACGAACGAGTGCTGGGGCTGAGAGCTTGAGTGCTCCACACGAATCGTTCTGCTTCTTTTTTCAACCGAAGTAAATTCTTGATATGGCTTAGAAATTAAGATTACTGCACACACATACACACACACACACGCACGTTGGCTTGTGTGCAGTTTGTCTTCACCTTTTTACCTAATCATTTTACACAGTGAAATGATCCGTCTTTGCCATCGCAGTTCCGGCAGAAACCCGTTTTTGCTGGTGAAGGATTTAAATTCCAGGACGAGCAATTTGGGTGCGTGTTGCGAGCATACTGAGTGGGTGGAAATTATCATTATGAACTACAAATAAAACGTTA]


>consensus_9064#0 AAGAAAATGTTGCTGCCGCGAAGCGATCGCTCCTGTTGCAGCTAAAAACTGAAAACAAAC CCAATAAACTAGGCGAATCTCGGTTAATAGTACACCAAAATGGCAGACGATTTGCAGAAT TACAAGCTGCAACTACAGCAGGTCGAAGCTGCCCTGCTTACAGATCCGGAGAACTCGGAA CTGCTCAAGCTGAAGGAGGACCTGAACGAGGTGATCGAACTGACGAAGGATCTGATCAAG GCGCAGCAGGAACCGGAACAGAAAAAGTCGTCGTACATTGAGCCGGCCACCAGCAGCTAC TACGAGGGCGTCTCGGGAGCGGACAAGAAGCAGCCGAAGCCAGCGAAGGTATGGAAGGTG GGTGATAAATGTTCTGCTAAGTGGATTGAAGACGGTCAGTACTATGATGCTACCATAGAG TCGATCTCGGAAACGGGCGAGGTGAACATCGTGTTTGAGGCGTACCAGAACCGGAGCAAC ACCACGATTAGTGAGCTGAAGGAGCCAAAGACACGGAACGAGGTGTTTCCCGCCAACAGT AACAAACGCATGCGGCACAATCAGAAAGAATACCTGAAGAAAAAGAAGATGAAAAAAATC CAGCGATTCAAGGAGCTGGAGGAGGAACGGGAATGCGAGAAGAACAAATGGCTTCAGTTT ACCGCCAAATCATCGAAAAAGTCCGGTGGCGTGAAACCGAAGAGTATTTTTGCTTCGCCC GAAAATGTGAACGGCCGGGTCGGTATCGGTACCTGCGGTGTGTCCGGCAAACCGATGACG GAGTTTTCACACGGAGAAAAGTACAGGAAAGGTGTTTAGGGACGCTTTTGCTGGCACGAA CGAGTGCTGGGGCTGAGAGCTTGAGTGCTCCACACGAATCGTTCTGCTTCTTTTTTCAAT CGAAGTAAATTCTTGATATGGCTTAGAAATTAAGATTACTGCACACACATACACACACAC ACACGCACATAGGCTTGTGTGCAGTTTGTCTTCACCTTTTTACCTAATCATTTTACACAG TGAAATGATCCGTCTTTGCCATCGCAGTTCCGGCAGAAACCCGTTTTTGCTGGTGAAGGA TTTAAATTCCAGGACGAGCAATTTGGGTGCGTGTTGCGAGCATACTGAGTGGGTGGAAAT TATCATTATGAACTACAAATAAAACGTTA



consensusID : consensus_9064#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 688
fasta sequence
                              [CCGCGGACGCGTGGGCAAACCCAATAAACTAGGCGAATCTCGGTTGATAGTACACCAAAATGGCAGACGATTTGCAGAATTACAAGCTGCAACTACAGCAGGTCGAAGCTGCCCTGCTAACAGATCCGGAGAACTCGGAACTGCTCAAGCTGAAGGAGGACCTCAACGAGGTGATCGAACTGACGAAGGATCTGATCAAGGCGCAGCAGGAACCGGAACAGAAAAAGTCATCGTACATTGAGCCGGCCACCAGCAGCTACTACGAGGGCGTCTCGGGAGCGGACAAGAAGCAGTCAAAGCCAGCGAAGGTATGGAAGGTGGGTGATAAATGTTCTGCTAAGTGGATTGAAGACGGTCAGTACTATGATGCTACCATAGAGTCGATCTCGGAAACGGGCGAGGTGAACATCGTGTTTGAGGCGTACCAGAACCGGAGCAACACCACGATTAGTGAGCTGAAGGAGCCAAAGACACGGAACGAGGTGTTTCCCGCCAACAGTAACAAACGCATGCGGCACAATCAGAAGGAATACCTGAAGAAAAAGAAGATGAAAAAAATCCAGCGATTCAAGGAGCTGGAAGAGGAACGGGAATGCGAGAAGAACAAATGGCTTCAGTTTACCGCCAAATCATCGAAAAAGTCCGGTGGCGTGAAACCGAAGAGTATTTTTGCTTCGCCCGAAAATGT]

[+] EMBL BM583837             [CCGCGGACGCGTGGGCAAACCCAATAAACTAGGCGAATCTCGGTTGATAGTACACCAAAATGGCAGACGATTTGCAGAATTACAAGCTGCAACTACAGCAGGTCGAAGCTGCCCTGCTAACAGATCCGGAGAACTCGGAACTGCTCAAGCTGAAGGAGGACCTCAACGAGGTGATCGAACTGACGAAGGATCTGATCAAGGCGCAGCAGGAACCGGAACAGAAAAAGTCATCGTACATTGAGCCGGCCACCAGCAGCTACTACGAGGGCGTCTCGGGAGCGGACAAGAAGCAGTCAAAGCCAGCGAAGGTATGGAAGGTGGGTGATAAATGTTCTGCTAAGTGGATTGAAGACGGTCAGTACTATGATGCTACCATAGAGTCGATCTCGGAAACGGGCGAGGTGAACATCGTGTTTGAGGCGTACCAGAACCGGAGCAACACCACGATTAGTGAGCTGAAGGAGCCAAAGACACGGAACGAGGTGTTTCCCGCCAACAGTAACAAACGCATGCGGCACAATCAGAAGGAATACCTGAAGAAAAAGAAGATGAAAAAAATCCAGCGATTCAAGGAGCTGGAAGAGGAACGGGAATGCGAGAAGAACAAATGGCTTCAGTTTACCGCCAAATCATCGAAAAAGTCCGGTGGCGTGAAACCGAAGAGTATTTTTGCTTCGCCCGAAAATGT]


>consensus_9064#1 CCGCGGACGCGTGGGCAAACCCAATAAACTAGGCGAATCTCGGTTGATAGTACACCAAAA TGGCAGACGATTTGCAGAATTACAAGCTGCAACTACAGCAGGTCGAAGCTGCCCTGCTAA CAGATCCGGAGAACTCGGAACTGCTCAAGCTGAAGGAGGACCTCAACGAGGTGATCGAAC TGACGAAGGATCTGATCAAGGCGCAGCAGGAACCGGAACAGAAAAAGTCATCGTACATTG AGCCGGCCACCAGCAGCTACTACGAGGGCGTCTCGGGAGCGGACAAGAAGCAGTCAAAGC CAGCGAAGGTATGGAAGGTGGGTGATAAATGTTCTGCTAAGTGGATTGAAGACGGTCAGT ACTATGATGCTACCATAGAGTCGATCTCGGAAACGGGCGAGGTGAACATCGTGTTTGAGG CGTACCAGAACCGGAGCAACACCACGATTAGTGAGCTGAAGGAGCCAAAGACACGGAACG AGGTGTTTCCCGCCAACAGTAACAAACGCATGCGGCACAATCAGAAGGAATACCTGAAGA AAAAGAAGATGAAAAAAATCCAGCGATTCAAGGAGCTGGAAGAGGAACGGGAATGCGAGA AGAACAAATGGCTTCAGTTTACCGCCAAATCATCGAAAAAGTCCGGTGGCGTGAAACCGA AGAGTATTTTTGCTTCGCCCGAAAATGT



consensusID : consensus_9064#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 526
fasta sequence
                              [GCCCCGGGTTNTAAGCGATCGCTCCTGGCTGCNGCTGAAAACTGAAATTAAACCCAATAAACTAGGCGAATCTCGGTTGATAGTACCTCAAAATGGCAGACGATTTGCAGAATTACAAGCTGCAACTACAGCAGGTCGAAGCTGCCTGCTAACAGATCCGGAGAACTCGGAACTGCTCAAGCTGAAGGCAGGACCTGAACGAGGTGATCGAACTGACGAAGGATCTGATCAAGGCGCAGCAGGAACCGGAACAGAAAAACGTCATCGTACATTGAGCCGGCCACCAGCAGCATACTACGAGGGCGTCTCGNGGAGACGGACAAGAAGCAGTCAAACGCCAGCGAAGGTACTGGAAGGTGGGTGATAAACTGTNCTGCNTAAGTGGACTTGNAGACGGTCAGGTACTATGATGCTACCATAGAGTCGATCTCGTAAACGGGCTGACGTGAACATCGTGTATGAGGCTGTACCAGAACCGGTAGCAACACCACGATTACGTGAGCTGAAGGAGCCAAAAGACAAGGAA]

[+] EMBL AL697604             [GCCCCGGGTTNTAAGCGATCGCTCCTGGCTGCNGCTGAAAACTGAAATTAAACCCAATAAACTAGGCGAATCTCGGTTGATAGTACCTCAAAATGGCAGACGATTTGCAGAATTACAAGCTGCAACTACAGCAGGTCGAAGCTGCCTGCTAACAGATCCGGAGAACTCGGAACTGCTCAAGCTGAAGGCAGGACCTGAACGAGGTGATCGAACTGACGAAGGATCTGATCAAGGCGCAGCAGGAACCGGAACAGAAAAACGTCATCGTACATTGAGCCGGCCACCAGCAGCATACTACGAGGGCGTCTCGNGGAGACGGACAAGAAGCAGTCAAACGCCAGCGAAGGTACTGGAAGGTGGGTGATAAACTGTNCTGCNTAAGTGGACTTGNAGACGGTCAGGTACTATGATGCTACCATAGAGTCGATCTCGTAAACGGGCTGACGTGAACATCGTGTATGAGGCTGTACCAGAACCGGTAGCAACACCACGATTACGTGAGCTGAAGGAGCCAAAAGACAAGGAA]


>consensus_9064#2 GCCCCGGGTTNTAAGCGATCGCTCCTGGCTGCNGCTGAAAACTGAAATTAAACCCAATAA ACTAGGCGAATCTCGGTTGATAGTACCTCAAAATGGCAGACGATTTGCAGAATTACAAGC TGCAACTACAGCAGGTCGAAGCTGCCTGCTAACAGATCCGGAGAACTCGGAACTGCTCAA GCTGAAGGCAGGACCTGAACGAGGTGATCGAACTGACGAAGGATCTGATCAAGGCGCAGC AGGAACCGGAACAGAAAAACGTCATCGTACATTGAGCCGGCCACCAGCAGCATACTACGA GGGCGTCTCGNGGAGACGGACAAGAAGCAGTCAAACGCCAGCGAAGGTACTGGAAGGTGG GTGATAAACTGTNCTGCNTAAGTGGACTTGNAGACGGTCAGGTACTATGATGCTACCATA GAGTCGATCTCGTAAACGGGCTGACGTGAACATCGTGTATGAGGCTGTACCAGAACCGGT AGCAACACCACGATTACGTGAGCTGAAGGAGCCAAAAGACAAGGAA



consensusID : consensus_9064#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 488
fasta sequence
                              [GCAGCTAAAAACTGAAAACAAACCCAATAAACTAGGCGAATCTCGGTTGATAGTACACCAAAATGGCAGACGATTTGCAGAATTACAAGCTGCAACTACAGCAGGTCGAAGCTGCCCTGCTAACAGATCCGGAGAACTCGGAACTGCTCAAGCTGAAGGAGCCAAAGACACGGAACGAGGTGTTTCCCGCCAACAGTAACAAACGCATGCGGCACAATCAGAAGGAATACCTGAAGAAAAAGAAGATGAAAAAAATCCAGCGATTCAAGGAGCTGGAAGAGGAACGGGAATGCGAGAAGAACAAATGGCTTCAGTTTACCGCCAAATCATCGAAAAAGTCCGGTGGCGTGAAACCGAAGAGTATTTTTGCTTCGCCCGAAAATGTGAACGGCCGGGTCGGTATCGGTACCTGCGGTGTGTCCGGCAAACCGATGACGGAGTTTTCACACGGAGAAAAGTACAGGAAAGGTGTTTAGGGACGTTTTTGC]

[+] EMBL BX610993             [GCAGCTAAAAACTGAAAACAAACCCAATAAACTAGGCGAATCTCGGTTGATAGTACACCAAAATGGCAGACGATTTGCAGAATTACAAGCTGCAACTACAGCAGGTCGAAGCTGCCCTGCTAACAGATCCGGAGAACTCGGAACTGCTCAAGCTGAAGGAGCCAAAGACACGGAACGAGGTGTTTCCCGCCAACAGTAACAAACGCATGCGGCACAATCAGAAGGAATACCTGAAGAAAAAGAAGATGAAAAAAATCCAGCGATTCAAGGAGCTGGAAGAGGAACGGGAATGCGAGAAGAACAAATGGCTTCAGTTTACCGCCAAATCATCGAAAAAGTCCGGTGGCGTGAAACCGAAGAGTATTTTTGCTTCGCCCGAAAATGTGAACGGCCGGGTCGGTATCGGTACCTGCGGTGTGTCCGGCAAACCGATGACGGAGTTTTCACACGGAGAAAAGTACAGGAAAGGTGTTTAGGGACGTTTTTGC]


>consensus_9064#3 GCAGCTAAAAACTGAAAACAAACCCAATAAACTAGGCGAATCTCGGTTGATAGTACACCA AAATGGCAGACGATTTGCAGAATTACAAGCTGCAACTACAGCAGGTCGAAGCTGCCCTGC TAACAGATCCGGAGAACTCGGAACTGCTCAAGCTGAAGGAGCCAAAGACACGGAACGAGG TGTTTCCCGCCAACAGTAACAAACGCATGCGGCACAATCAGAAGGAATACCTGAAGAAAA AGAAGATGAAAAAAATCCAGCGATTCAAGGAGCTGGAAGAGGAACGGGAATGCGAGAAGA ACAAATGGCTTCAGTTTACCGCCAAATCATCGAAAAAGTCCGGTGGCGTGAAACCGAAGA GTATTTTTGCTTCGCCCGAAAATGTGAACGGCCGGGTCGGTATCGGTACCTGCGGTGTGT CCGGCAAACCGATGACGGAGTTTTCACACGGAGAAAAGTACAGGAAAGGTGTTTAGGGAC GTTTTTGC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9064#1      ---------------------------------------CCGCGGACGCGTGGG--CAAA 19
consensus_9064#2      --------GCCCCGGGTTNTAAGCGATCGCTCCTGGCTGCNGCTGAAAACTGAAATTAAA 52
consensus_9064#0      AAGAAAATGTTGCTGCCGCGAAGCGATCGCTCCTG-TTGCAGCTAAAAACTGAAAACAAA 59
consensus_9064#3      --------------------------------------GCAGCTAAAAACTGAAAACAAA 22
                                                             * **  *    **     ***

consensus_9064#1      CCCAATAAACTAGGCGAATCTCGGTTGATAGTACACCAAAATGGCAGACGATTTGCAGAA 79
consensus_9064#2      CCCAATAAACTAGGCGAATCTCGGTTGATAGTACCTCAAAATGGCAGACGATTTGCAGAA 112
consensus_9064#0      CCCAATAAACTAGGCGAATCTCGGTTAATAGTACACCAAAATGGCAGACGATTTGCAGAA 119
consensus_9064#3      CCCAATAAACTAGGCGAATCTCGGTTGATAGTACACCAAAATGGCAGACGATTTGCAGAA 82
                      ************************** *******  ************************

consensus_9064#1      TTACAAGCTGCAACTACAGCAGGTCGAAGCTGCCCTGCTAACAGATCCGGAGAACTCGGA 139
consensus_9064#2      TTACAAGCTGCAACTACAGCAGGTCGAAGCTGCC-TGCTAACAGATCCGGAGAACTCGGA 171
consensus_9064#0      TTACAAGCTGCAACTACAGCAGGTCGAAGCTGCCCTGCTTACAGATCCGGAGAACTCGGA 179
consensus_9064#3      TTACAAGCTGCAACTACAGCAGGTCGAAGCTGCCCTGCTAACAGATCCGGAGAACTCGGA 142
                      ********************************** **** ********************

consensus_9064#1      ACTGCTCAAGCTGAAGG-----AGGAC-CTCAACGAGGTGAT-----CGAAC--TGACGA 186
consensus_9064#2      ACTGCTCAAGCTGAAGGC----AGGAC-CTGAACGAGGTGAT-----CGAAC--TGACGA 219
consensus_9064#0      ACTGCTCAAGCTGAAGG-----AGGAC-CTGAACGAGGTGAT-----CGAAC--TGACGA 226
consensus_9064#3      ACTGCTCAAGCTGAAGGAGCCAAAGACACGGAACGAGGTGTTTCCCGCCAACAGTAACAA 202
                      *****************     * *** *  ********* *     * ***  * ** *

consensus_9064#1      AGG-ATCTGATCAAGGCGCAGCAGGAACCGGAACAGAAAAA-GTCATCGTACATTGAGCC 244
consensus_9064#2      AGG-ATCTGATCAAGGCGCAGCAGGAACCGGAACAGAAAAACGTCATCGTACATTGAGCC 278
consensus_9064#0      AGG-ATCTGATCAAGGCGCAGCAGGAACCGGAACAGAAAAA-GTCGTCGTACATTGAGCC 284
consensus_9064#3      ACGCATGCGGCACAATCAGAAGGAATACCTGAAGAAAAAGAAGATGAAAAAAATCCAGCG 262
                      * * **  *    *  *  *      *** *** * *** * *       * **  *** 

consensus_9064#1      GGCCACCAGCAGC-TACTACGAGGGCGTCTCGGGAG--CGGACAAGAAGCAGTCAAA-GC 300
consensus_9064#2      GGCCACCAGCAGCATACTACGAGGGCGTCTCGNGGAGACGGACAAGAAGCAGTCAAACGC 338
consensus_9064#0      GGCCACCAGCAGC-TACTACGAGGGCGTCTCGGGAG--CGGACAAGAAGCAGCCGAA-GC 340
consensus_9064#3      ATTCA--AGGAGC-TGGAAGAGGAACGGGAATGCGAGAAGAACAAATGGCT-TCAGTTTA 318
                         **  ** *** *   *   *  **            * ****   **   *      

consensus_9064#1      CAGCGAAGGTA-TGGAAGGTGGGTGATAAA-TGTTCTGCT-AAGTGGA-TTGAAGACGGT 356
consensus_9064#2      CAGCGAAGGTACTGGAAGGTGGGTGATAAACTGTNCTGCNTAAGTGGACTTGNAGACGGT 398
consensus_9064#0      CAGCGAAGGTA-TGGAAGGTGGGTGATAAA-TGTTCTGCT-AAGTGGA-TTGAAGACGGT 396
consensus_9064#3      CCGCCAAATCA-TCGAAAAAGTCCGGTGGC--GTGAAACCGAAGAGTATTTTTGCTTCGC 375
                      * ** **   * * ***   *   * *     **    *  *** * * **       * 

consensus_9064#1      CAG-TACTATGATGCTACCATAGAGTCGATCTCGGAAACGGGC-GAGGTGAACATCGTGT 414
consensus_9064#2      CAGGTACTATGATGCTACCATAGAGTCGATCTCGTAAACGGGCTGACGTGAACATCGTGT 458
consensus_9064#0      CAG-TACTATGATGCTACCATAGAGTCGATCTCGGAAACGGGC-GAGGTGAACATCGTGT 454
consensus_9064#3      CCGAAAATGTGA----ACGGCCGGGTCGGTATCG-GTACCTGC-GGTGTGTCCGGCAAAC 429
                      * *  * * ***    **    * **** * ***   **  ** *  ***  *  *    

consensus_9064#1      TTGAGGC-GTACCAGAACCGG-AGCAACACCACGATTA-GTGAGCTGAAGGAGCCAAA-G 470
consensus_9064#2      ATGAGGCTGTACCAGAACCGGTAGCAACACCACGATTACGTGAGCTGAAGGAGCCAAAAG 518
consensus_9064#0      TTGAGGC-GTACCAGAACCGG-AGCAACACCACGATTA-GTGAGCTGAAGGAGCCAAA-G 510
consensus_9064#3      CGATGACGGAGTTTTCACACGGAGAAA-AGTACAGGAA-AGGTGTTTAGGGACGTTTTTG 487
                          * * *       **  * ** ** *  **    *   * * * * ***       *

consensus_9064#1      ACACGGAACGAGGTGTTTCCCGCCAACAGTAACAAACGCATGCGGCACAATCAGAAGGAA 530
consensus_9064#2      ACAAGGAA---------------------------------------------------- 526
consensus_9064#0      ACACGGAACGAGGTGTTTCCCGCCAACAGTAACAAACGCATGCGGCACAATCAGAAAGAA 570
consensus_9064#3      C----------------------------------------------------------- 488
                                                                                  

consensus_9064#1      TACCTGAAGAAAAAGAAGATGAAAAAAATCCAGCGATTCAAGGAGCTGGAAGAGGAACGG 590
consensus_9064#2      ------------------------------------------------------------
consensus_9064#0      TACCTGAAGAAAAAGAAGATGAAAAAAATCCAGCGATTCAAGGAGCTGGAGGAGGAACGG 630
consensus_9064#3      ------------------------------------------------------------
                                                                                  

consensus_9064#1      GAATGCGAGAAGAACAAATGGCTTCAGTTTACCGCCAAATCATCGAAAAAGTCCGGTGGC 650
consensus_9064#2      ------------------------------------------------------------
consensus_9064#0      GAATGCGAGAAGAACAAATGGCTTCAGTTTACCGCCAAATCATCGAAAAAGTCCGGTGGC 690
consensus_9064#3      ------------------------------------------------------------
                                                                                  

consensus_9064#1      GTGAAACCGAAGAGTATTTTTGCTTCGCCCGAAAATGT---------------------- 688
consensus_9064#2      ------------------------------------------------------------
consensus_9064#0      GTGAAACCGAAGAGTATTTTTGCTTCGCCCGAAAATGTGAACGGCCGGGTCGGTATCGGT 750
consensus_9064#3      ------------------------------------------------------------
                                                                                  

consensus_9064#1      ------------------------------------------------------------
consensus_9064#2      ------------------------------------------------------------
consensus_9064#0      ACCTGCGGTGTGTCCGGCAAACCGATGACGGAGTTTTCACACGGAGAAAAGTACAGGAAA 810
consensus_9064#3      ------------------------------------------------------------
                                                                                  

consensus_9064#1      ------------------------------------------------------------
consensus_9064#2      ------------------------------------------------------------
consensus_9064#0      GGTGTTTAGGGACGCTTTTGCTGGCACGAACGAGTGCTGGGGCTGAGAGCTTGAGTGCTC 870
consensus_9064#3      ------------------------------------------------------------
                                                                                  

consensus_9064#1      ------------------------------------------------------------
consensus_9064#2      ------------------------------------------------------------
consensus_9064#0      CACACGAATCGTTCTGCTTCTTTTTTCAATCGAAGTAAATTCTTGATATGGCTTAGAAAT 930
consensus_9064#3      ------------------------------------------------------------
                                                                                  

consensus_9064#1      ------------------------------------------------------------
consensus_9064#2      ------------------------------------------------------------
consensus_9064#0      TAAGATTACTGCACACACATACACACACACACACGCACATAGGCTTGTGTGCAGTTTGTC 990
consensus_9064#3      ------------------------------------------------------------
                                                                                  

consensus_9064#1      ------------------------------------------------------------
consensus_9064#2      ------------------------------------------------------------
consensus_9064#0      TTCACCTTTTTACCTAATCATTTTACACAGTGAAATGATCCGTCTTTGCCATCGCAGTTC 1050
consensus_9064#3      ------------------------------------------------------------
                                                                                  

consensus_9064#1      ------------------------------------------------------------
consensus_9064#2      ------------------------------------------------------------
consensus_9064#0      CGGCAGAAACCCGTTTTTGCTGGTGAAGGATTTAAATTCCAGGACGAGCAATTTGGGTGC 1110
consensus_9064#3      ------------------------------------------------------------
                                                                                  

consensus_9064#1      -----------------------------------------------------------
consensus_9064#2      -----------------------------------------------------------
consensus_9064#0      GTGTTGCGAGCATACTGAGTGGGTGGAAATTATCATTATGAACTACAAATAAAACGTTA 1169
consensus_9064#3      -----------------------------------------------------------
                                                                                 




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)