cluster # 9072

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Anopheles gambiae
cluster # 9072 cluster # 9072 Sequences # 14 consensus # 5

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9072#0 length = 1470 sequences # 10
consensus_9072#1 length = 603 sequences # 1

consensus_9072#2 length = 529 sequences # 1
consensus_9072#3 length = 470 sequences # 1
consensus_9072#4 length = 414 sequences # 1

consensusID : consensus_9072#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 1470
fasta sequence

                              [TGGCATCCCAAAAGTAAACGCACGTGTTTTTGGGCTGCGGTACAGCGTGCAGAGCTGTACCAATTCGGCATTGAATTAGAAATTTTCCGTTCCCGGAACCCGTGCAAGTGCGCTTAATTGGCAGCAAAAGCCGAAAGTGGCAAAGTAGCTGCAAAAACGTGCTAGTTCAGTGACATTTTCATCTCATAATGGGCAGACCAGGATTCTCTCCCAGAGGTGGCGGTGGTCGTGGAGGAGGCGGTGACCGGGGCGGACGCGGCGGCTTCGGTGGCCGTGGACGCGGTGGCGGTGATCGCGGTGGCCGCGGAGGTTTCGGTGGTGGTCGCGGCCGCGGCGGCGGTGGTCGTGGTGGACCGGGCGGACGGGGCCGCGGTGGCGGCCGTGGCGGACCGGGTGGCCGCGGGGGTGGCAAGATGGGTGGTTTCAAGGGGGGCAAATCTGTCGTCATCGAGCCACATCGTCACGAGGGCATCTTCATCGCACGCGGCAAGGAAGACGCGCTGGTTACGCTGAACCTGGTGCCCGGCTCGGAGGTGTACGGCGAGAAGCGCATTTCGGTTGAGAACGAAGGGGACAAGAAGGAGTACCGCGTGTGGAACCCGTTCCGATCGAAGCTGGCGGCGGCCGTGCTCGGCGGCGTTGACAAGATTCACATGCCGCCCGGCTCGAAGGTGCTGTACCTGGGTGCCGCCTCCGGCACGACCGTCTCGCACGTGTCGGACATCGTCGGCCCGGAGGGGCTGGTGTACGCGGTCGAGTTCTCGCACCGGTCCGGGCGCGATCTGCTCAATGTGGCGAAGAAGCGCACCAACATCATCCCCATCATCGAGGACGCGCGCCATCCGCACAAGTACCGCATGCTGGTCGGCATGGTCGATACCGTGTTTGCCGATGTGGCCCAGCCGGATCAGGCCCGTATCGTGGCGCTCAATGCGCACAACTTCCTCAAGAACGGTGGCCACTTTGTCATCTCCATCAAGGCGTCCTGCATCGACTCGACCGCCGTCCCCGAGGCGGTGTTCGCGGCGGAGGTGAAGAAGCTGCAATCGGAAAAGCTAAAACCGCAGGAACAGATCACGCTCGAGCCGTACGAGCGTGACCACGCGGTAGTGGTGGGCGTGTACCGACCACCGCCGAAGGCTGCGGCATAAGAGCGGGCAGGCGGGCGGGCGGGACAGGTCGGTGGAGAGGTCCGTTAGGTTATTAAGGGGTCTTGTTAGTGTATAAGAACCAAAA-TTGCTTCTATATTTCACCCAACAACCTCGGCGATTTAGCGGCAGCAGAGGGCTGTGTACGGTGGATCAAACTTCAAACTAAGGAACACAAAACAAATCTATGTCTATGTATACACAGTACATAAAAGAAGAGACATGCAGGTCGAGATGCAAACGAGTGCGAGTGGTTTAATTTTAGCATTTGTTTTTTTTTCTCTGTGGGATATAATGACCCACTACGACAAATTGAAAATAA]

[+] EMBL BX604531             [TGGCATCCCAAAAGTAAACGCACGTGTTTTTGGGCTGCGGTACAGCGTGCAGAGCTGTACCAATTCGGCATTGAATTAGAAATTTTCCGTTCCCGGAACCCGTGCAAGTGCGCTTAATTGGCAGCAAAAGCCGAAAGTGGCAAAGTAGCTGCAAAAACGTGCTAGTTCAGTGACATTTTCATCTCATAATGGGCAGACCAGGATTCTCTCCCAGAGGTGGCGGTGGTCGTGGAGGAGGCGGTGACCGGGGCGGACGCGGCGGCTTCGGTGGCCGTGGACGCGGTGGCGGTGATCGCGGTGGCCGCGGAGGTTTCGGTGGTGGTCGCGGCCGCGGCGGCGGTGGTCGTGGTGGACCGGGCGGACGGGGCCGCGGTGGCGGCCGTGGCGGACCGGGTGGCCGCGGGGGTGGCAAGATGGGTGGTTTCAGGGGGGGCAAATCTGTCGTCATCGAGCCACATCGTCACGAGGGCATCTTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL BM603218             [     ccgCAAAAGTAAACGCACGTGTTTTTGGGCTGCGGTACAGCGTGCAGAGCTGTATCAATTCGGCATTGAATTAGAAATTTTCCGTTCCCGGAACCCGTGCAAGTGCGCTTAATTGGCAGCAAAAGCCGAAAGTGGCAAAGTAGCTGCAAAAACGTGCTAGTTCAGTGAAATTTTCATCTCATAATGGGCAGACCAGGATTCTCTCCAAGAGGTGGTGGTGGCCGTGGAGGAGGCGGTGACCGTGGCGGACGCGGCGGCTTCGGTGGCCGTGGACGCGGTGGCGGTGATCGCGGTGGTCGTGGAGGTTTCGGTGGTGGTCGCGGCCGAGGCGGCGGTGGTCGTGGTGGACCGGGTGGACGGGGCCGCGGTGGCGGCCGTGGCGGACCGGGTGGCCGCGGGGGCGGCAAGATGGGTGGCTTCAAGGGGGGCAAATCCGTCGTCATCGAGCCGCATCGTCACGAGGGTATCTTCATCGCACGCGGCAAGGAAGACGCGCTGGTTACGCTGAACCTGGTGCCCGGCTCGGAGGTGTACGGCGAGAAGCGCATTTCGGTTGAGAACGAAGGGGACAAGAAGGAGTACCGCGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL BX614134             [                                        TACAGCGTGCAGAGCTGTACCAATTCGGCATTGAATTAGAAATTTTCCGTTCCCGGAACCCGTGCAAGTGCGCTTAATTGGCAGCAAAAGCCGAAAGTGGCAAAGTAGCTGCAAAAACGTGCTAGTTCAGTGACATTTTCATCTCATAATGGGCAGACCAGGATTCTCTCCCAGAGGTGGCGGTGGTCGTGGAGGAGGCGGTGACCGGGGCGGACGCGGCGGCTTCGGTGGCCGTGGACGCGGTGGCGGTGATCGCGGTGGCCGCGGAGGTTTCGGTGGTGGTCGCGGCCGCGGCGGCGGTGGTCGTGGTGGACCGGGCGGACGGGGCCGCGGTGGCGGCCGTGGCGGACCGGGTGGCCGCGGGGGTGGCAAGATGGGTGGTTTCAAGGGGGGCAAATCTGTCGTCATCGAGCCACATCGTCACGAGGGCATCTTCATCGCAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL BM617139             [                                                ccgGAGCTGTACCAATTCGGCATTGAATTAGAAATTTTCCATTCCCGGAACCCGTGCAAGTGCGCTTAATTGGCAGCAAAAGCCGAAAGTGGCAAAGTAGCTGCAAAAACGTGCTAGTTCAGTGAAATTTTCATCTCATAATGGGCAGACCAGGATTCTCTCCCAGAGGTGGCGGTGGTCGTGGAGGAGGCGGTGACCGGGGCGGACGTGGTGGCTTCGGTGGCCGTGGACGCGGTGGCGGTGATCGCGGTGGTCGTGGAGGTTTCGGTGGTGGTCGCGGCCGAGGCGGCGGTGGTCGTGGTGGACCGGGTGGACGGGGCCGTGGTGGCGGCCGTGGCGGACCGGGTGGCCGCGGGGGCGGCAAGATGGGTGGCTTCAAGGGGGGCAAATCCGTCGTCATCGAGCCGCATCGTCACGAGGGCATCTTCATCGCACGCGGCAAGGAAGACGCGCTGGTTACGCTGAACCTGGTGCCAGGCTCGGAGGTGTACGGCGAGAAGCGCATTTCGGTTGAGAACGAAGGGGACAAGAAGGAGTACCGCGTGTGGAACCCGTTCCGATCGAAGCTGGCGGCGGCCGTGCTCGGCGGCGTTGACAAAATTCACATGCCGCCCGGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL BX607113             [                                                                 CGGCATTGAATTAGAAATTTTCCGTTCCCGGAACCCGTGCAAGTGCGCTTAATTGGCAGCAAAAGCCGAAAGTGGCAAAGTAGCTGCAAAAACGTGCTAGTTCAGTGACATTTTCATCTCATAATGGGCAGACCAGGATTCTCTCCCAGAGGTGGCGGTGGTCGTGGAGGAGGCGGTGACCGGGGCGGACGCGGCGGCTTCGGTGGCCGTGGACGCGGTGGCGGTGATCGCGGTGGCCGCGGAGGTTTCGGTGGTGGTCGCGGCCGCGGCGGCGGTGGTCGTGGTGGACCGGGCGGACGGGGCCGCGGTGGCGGCCGTGGCGGACCGGGTGGCCGCGGGGGTGGCAAGATGGGTGGTTTCAAGGGGGGCAAATCTGTCGTCATCGAGCCACATCGTCACGAGGGCATCTTCATCGCACGCGGCAAAGAAGACGCGCTGGTTACGCTAAATCTGGTGCCCGGCTCGGAGGTGTACGGCGAGAAGCGCATTTCGGTTGAGAACGAAGGGGACAAGAAGGAGTACCGCGTGTGGAACCCGTTCCGATCGAAGCTGGCGGCGGCCGTGCTCGGCGGCGTTGACAAGATTCACATGCCGCCCGGCTCGAAGGTGCTGTACCTGGGTGCCGCCTCCGGCACGACCGTCTCGCACGTGTCGGACATCGTCGGCCCGGAGGGGCTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL BX618683             [                                                                                                                                                                                                                                                                                  TGGACGCGGTGGCGGTGATCGCGGTGGCCGCGGAGGTTTCGGTGGTGGTCGCGGCCGCGGCGGCGGTGGTCGTGGTGGACCGGGCGGACGGGGCCGCGGTGGCGGCCGTGGCGGACCGGGTGGCCGCGGGGGTGGCAAGATGGGTGGGTTCAAGGGGGGCAAATCTGTCGTCATCGAGCCACATCGTCACGAGGGCATCTTCATCGCACGCGGCAAAGAAGACGCGCTGGGTACGCCAAATCCGGgg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL BM578812             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ccgAGAAGGAGTACCGCGTGTGGAACCCGTTCCGATCGAAGCTGGCGGCGGCCGTGCTCGGCGGCGTTGACAAGATTCACATGCCGCCCGGCTCGAAGGTGCTGTACCTGGGTGCCGCCTCCGGCACGACCGTCTCGCACGTGTCGGACATCGTCGGCCCGGAGGGGCTGGTGTACGCGGTCGAGTTCTCGCACCGGTCCGGGCGCGATCTGCTCAATGTGGCGAAGAAGCGCACCAACATCATCCCCATCATCGAGGACGCGCGCCATCCGCACAAGTACCGCATGCTGGTCGGCATGGTCGATACCGTGTTTGCCGATGTGGCCCAGCCGGATCAGGCCCGTATCGTGGCGCTCAATGCGCACAACTTCCTCAAGAACGGTGGCCACTTTGTCATCTCCATCAAGGCGTCCTGCATCGACTCGACCGCCGTCCCCGAGGCGGTGTTCGCGGCGGAGGTGAAGAAGCTGCAGTCGGAGAAGCTAAAACCGCAGGAACAGATCACGCTCGAGCCGTACGAGCGTGACCACGCGGTAGTGGTGGGCGTGTACCGACCACCGCCGAAG                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL AL932442             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ATTCACATGCCGCCCGGCTCGAAGGTGCTGTACCTGGGTGCCGCCTCCGGCACGACCGTCTCGCACGTGTCGGACATCGTCGGCCCGGAGGGGCTGGTGTACGCGGTCGAGTTCTCGCACCGGTCCGGGCGCGATCTGCTCAATGTGGCGAAGAAGCGCACCAACATCATCCCCATCATCGAGGACGCGCGCCATCCGCACAAGTACCGCATGCTGGTCGGCATGGTCGATACCGTGTTTGCCGATGTGGCCCAGCCGGATCAGGCCCGTATCGTGGCGCTCAATGCACACAACTTCCTCAAGAACGGTGGCCACTTTGTCATCTCCATCAAGGCGTCCTGCATCGACTCGACCGCCGTCCCCGAGGCGGTGTTCGCGGCGGAGGTGAAGAAGCTGCAATCGGAAAAGCTAAAACCGCAGGAACAGATCACGCTCGAGCCGTACGAGCGTGACCACGCGGTAGTGGTGGGCGTGTACCGACCACCGCCGAAGGCTGCGGCATAAGAGCGGGCAGGCGGGCGGGCGGGACAGGTCGGTGGAGAGGTCCGTTAGGTTATTAAGGGGTCTTGTTAGTGTATAAGAACCAAAA TTGCTTCTATATTTCACCCAACAACCTCGGCGATT                                                                                                                                                                                                       ]
[+] EMBL BM628493             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ccGGCCCAGCCGGATCAGGCCCGTATCGTGGCGCTCAATGCGCACAACTTCCTCAGGAACGGTGGCCACTTTGTCATCTCCATCAAGGCGTCCTGCATCGACTCGACCGCCGTCCCCGAGGCGGTTTTCGCGGCGGAGGTGAAGAAGCTGCAATCGGAAAAGCTAAAACCGCAGGAACAGATCACCCTCGAGCCGTACGAACGTGACCACGCGGTAGTGGTGGGCGTGTACCGACCACCGCCGAAGGCTGCGGCATAAGAGCGGGCAGGCGGGCGGGCGGGACAGGTCGGTGGAGA                                                                                                                                                                                                                                                                                          ]
[-] EMBL CNS08CKM             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     TGCGGCATAAGAGCG    GGCGGGCGGGCGGGGCATGTCGGTGGAGAGGTCCGTTAGGTTATTAAGGGGTCTTGTTAGTGTATAAGAACCAAAATTTGCTTCTATATTTCACCCAACCACCTAGTAGCAGTAGCGGCAGCAGAGGGCTGTGTACGGTGGATCAAACTTCAAACTAAGGAACACAAAACAAATCTATGTCTATGTATACACAGTACATAAAAGAAGAGACATGCAGGTCGAGATGCAAACGAGTGCGAGTGGTTTAATTTTAGCATTTGTTTTTTTTTCTCTGTGGGATATAATGACCCACTACGACAAATTGAAAATAA]




>consensus_9072#0
TGGCATCCCAAAAGTAAACGCACGTGTTTTTGGGCTGCGGTACAGCGTGCAGAGCTGTAC
CAATTCGGCATTGAATTAGAAATTTTCCGTTCCCGGAACCCGTGCAAGTGCGCTTAATTG
GCAGCAAAAGCCGAAAGTGGCAAAGTAGCTGCAAAAACGTGCTAGTTCAGTGACATTTTC
ATCTCATAATGGGCAGACCAGGATTCTCTCCCAGAGGTGGCGGTGGTCGTGGAGGAGGCG
GTGACCGGGGCGGACGCGGCGGCTTCGGTGGCCGTGGACGCGGTGGCGGTGATCGCGGTG
GCCGCGGAGGTTTCGGTGGTGGTCGCGGCCGCGGCGGCGGTGGTCGTGGTGGACCGGGCG
GACGGGGCCGCGGTGGCGGCCGTGGCGGACCGGGTGGCCGCGGGGGTGGCAAGATGGGTG
GTTTCAAGGGGGGCAAATCTGTCGTCATCGAGCCACATCGTCACGAGGGCATCTTCATCG
CACGCGGCAAGGAAGACGCGCTGGTTACGCTGAACCTGGTGCCCGGCTCGGAGGTGTACG
GCGAGAAGCGCATTTCGGTTGAGAACGAAGGGGACAAGAAGGAGTACCGCGTGTGGAACC
CGTTCCGATCGAAGCTGGCGGCGGCCGTGCTCGGCGGCGTTGACAAGATTCACATGCCGC
CCGGCTCGAAGGTGCTGTACCTGGGTGCCGCCTCCGGCACGACCGTCTCGCACGTGTCGG
ACATCGTCGGCCCGGAGGGGCTGGTGTACGCGGTCGAGTTCTCGCACCGGTCCGGGCGCG
ATCTGCTCAATGTGGCGAAGAAGCGCACCAACATCATCCCCATCATCGAGGACGCGCGCC
ATCCGCACAAGTACCGCATGCTGGTCGGCATGGTCGATACCGTGTTTGCCGATGTGGCCC
AGCCGGATCAGGCCCGTATCGTGGCGCTCAATGCGCACAACTTCCTCAAGAACGGTGGCC
ACTTTGTCATCTCCATCAAGGCGTCCTGCATCGACTCGACCGCCGTCCCCGAGGCGGTGT
TCGCGGCGGAGGTGAAGAAGCTGCAATCGGAAAAGCTAAAACCGCAGGAACAGATCACGC
TCGAGCCGTACGAGCGTGACCACGCGGTAGTGGTGGGCGTGTACCGACCACCGCCGAAGG
CTGCGGCATAAGAGCGGGCAGGCGGGCGGGCGGGACAGGTCGGTGGAGAGGTCCGTTAGG
TTATTAAGGGGTCTTGTTAGTGTATAAGAACCAAAATTGCTTCTATATTTCACCCAACAA
CCTCGGCGATTTAGCGGCAGCAGAGGGCTGTGTACGGTGGATCAAACTTCAAACTAAGGA
ACACAAAACAAATCTATGTCTATGTATACACAGTACATAAAAGAAGAGACATGCAGGTCG
AGATGCAAACGAGTGCGAGTGGTTTAATTTTAGCATTTGTTTTTTTTTCTCTGTGGGATA
TAATGACCCACTACGACAAATTGAAAATAA

consensusID : consensus_9072#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 603
fasta sequence

                              [CCGCGGACGCGTGGGTTGAATTAGAAATTTTCCATTCCCGGAACCCGTGCAAGTGCGCTTAATTGGCAGCAAAAGCCGAAAGTGGCAAAGTAGCTGCAAAAACGTGCTAGTTCAGTGAAATTTTCATCTCATAATGGGCAGACCAGGATTCTCTCCCAGAGGTGGCGGTGGTCGTGGAGGAGGCGGTGACCGGGGCGGACGTGGTGGCTTCGGTGGCCGTGGACGCGGTGGCGGTGATCGCGGTGGTCGTGGAGGTTTCGGTGGTGGTCGCGGCCGAGGCGGCGGTGGTCGTGGTGGACCGGGTGGACGGGGCCGTGGTGGCGGCCGTGGCGGACCGGGTGGCCGCGGGGGCGGCAAGATGGGTGGCTTCAAGGGGGGCAAATCCGTCGTCATCGAGCCGCATCGTCACGAGGGCATCTTCATCGCACGCGGCAAGGAAGACGCGCTGGTTACGCTGAACCTGGTGCCAGGCTCGGAGGTGTACGGCGAGAAGCGCATTTCGGTTGAGAACGAAGGGGACAAGAAGGAGTACCGCGTGTGGAACCCGTTCCGATCGAAGCTGGCGGCGGCCGTGCTCGGCGGCGTTGACAAGATTCACATGCC]

[+] EMBL BM622862             [CCGCGGACGCGTGGGTTGAATTAGAAATTTTCCATTCCCGGAACCCGTGCAAGTGCGCTTAATTGGCAGCAAAAGCCGAAAGTGGCAAAGTAGCTGCAAAAACGTGCTAGTTCAGTGAAATTTTCATCTCATAATGGGCAGACCAGGATTCTCTCCCAGAGGTGGCGGTGGTCGTGGAGGAGGCGGTGACCGGGGCGGACGTGGTGGCTTCGGTGGCCGTGGACGCGGTGGCGGTGATCGCGGTGGTCGTGGAGGTTTCGGTGGTGGTCGCGGCCGAGGCGGCGGTGGTCGTGGTGGACCGGGTGGACGGGGCCGTGGTGGCGGCCGTGGCGGACCGGGTGGCCGCGGGGGCGGCAAGATGGGTGGCTTCAAGGGGGGCAAATCCGTCGTCATCGAGCCGCATCGTCACGAGGGCATCTTCATCGCACGCGGCAAGGAAGACGCGCTGGTTACGCTGAACCTGGTGCCAGGCTCGGAGGTGTACGGCGAGAAGCGCATTTCGGTTGAGAACGAAGGGGACAAGAAGGAGTACCGCGTGTGGAACCCGTTCCGATCGAAGCTGGCGGCGGCCGTGCTCGGCGGCGTTGACAAGATTCACATGCC]




>consensus_9072#1
CCGCGGACGCGTGGGTTGAATTAGAAATTTTCCATTCCCGGAACCCGTGCAAGTGCGCTT
AATTGGCAGCAAAAGCCGAAAGTGGCAAAGTAGCTGCAAAAACGTGCTAGTTCAGTGAAA
TTTTCATCTCATAATGGGCAGACCAGGATTCTCTCCCAGAGGTGGCGGTGGTCGTGGAGG
AGGCGGTGACCGGGGCGGACGTGGTGGCTTCGGTGGCCGTGGACGCGGTGGCGGTGATCG
CGGTGGTCGTGGAGGTTTCGGTGGTGGTCGCGGCCGAGGCGGCGGTGGTCGTGGTGGACC
GGGTGGACGGGGCCGTGGTGGCGGCCGTGGCGGACCGGGTGGCCGCGGGGGCGGCAAGAT
GGGTGGCTTCAAGGGGGGCAAATCCGTCGTCATCGAGCCGCATCGTCACGAGGGCATCTT
CATCGCACGCGGCAAGGAAGACGCGCTGGTTACGCTGAACCTGGTGCCAGGCTCGGAGGT
GTACGGCGAGAAGCGCATTTCGGTTGAGAACGAAGGGGACAAGAAGGAGTACCGCGTGTG
GAACCCGTTCCGATCGAAGCTGGCGGCGGCCGTGCTCGGCGGCGTTGACAAGATTCACAT
GCC

consensusID : consensus_9072#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 529
fasta sequence

                              [TTCATCTCATAATGGGCAGACCAGGATTCTCTCCCAGAGGTGGCGGTGGTCGTGGAGGAGGCGGTGACCGGGGCGGACGCGGCGGCTTCGGTGGCCGTGGACGCGGTGGCGGTGATCGCGGTGGCCGCGGAGGTTTCGGTGGTGGCCGCGGTGGCGGCCGTGGCGGACCGGGTGGCCGCGGGGGTGGCAAGATGGGTGGTTTCAAGGGGGGCAAATCTGTCGTCATCGAGCCACATCGTCACGAGGGCATCTTCATCGCACGCGGCAAAGAAGACGCGCTGGTTACGCTAAATCTGGTGCCCGGCTCGGAGGTGTACGGCGAGAAGCGCATTTCGGTTGAGAACGAAGGGGACAAGAAGGAGTACCGCGTGTGGAACCCGTTCCGATCGAAGCTGGCGGCGGCCGTGCTCGGCGGCGTTGACAAGATTCACATGCCGCCCGGCTCGAAGGTGCTGTACCTGGGTGCCGCCTCCGGCACGACCGTCTCGCACGTGTCGGACATCGTCGGCCCCGGAGGGCTGGTGTACGC]

[+] EMBL BX605628             [TTCATCTCATAATGGGCAGACCAGGATTCTCTCCCAGAGGTGGCGGTGGTCGTGGAGGAGGCGGTGACCGGGGCGGACGCGGCGGCTTCGGTGGCCGTGGACGCGGTGGCGGTGATCGCGGTGGCCGCGGAGGTTTCGGTGGTGGCCGCGGTGGCGGCCGTGGCGGACCGGGTGGCCGCGGGGGTGGCAAGATGGGTGGTTTCAAGGGGGGCAAATCTGTCGTCATCGAGCCACATCGTCACGAGGGCATCTTCATCGCACGCGGCAAAGAAGACGCGCTGGTTACGCTAAATCTGGTGCCCGGCTCGGAGGTGTACGGCGAGAAGCGCATTTCGGTTGAGAACGAAGGGGACAAGAAGGAGTACCGCGTGTGGAACCCGTTCCGATCGAAGCTGGCGGCGGCCGTGCTCGGCGGCGTTGACAAGATTCACATGCCGCCCGGCTCGAAGGTGCTGTACCTGGGTGCCGCCTCCGGCACGACCGTCTCGCACGTGTCGGACATCGTCGGCCCCGGAGGGCTGGTGTACGC]




>consensus_9072#2
TTCATCTCATAATGGGCAGACCAGGATTCTCTCCCAGAGGTGGCGGTGGTCGTGGAGGAG
GCGGTGACCGGGGCGGACGCGGCGGCTTCGGTGGCCGTGGACGCGGTGGCGGTGATCGCG
GTGGCCGCGGAGGTTTCGGTGGTGGCCGCGGTGGCGGCCGTGGCGGACCGGGTGGCCGCG
GGGGTGGCAAGATGGGTGGTTTCAAGGGGGGCAAATCTGTCGTCATCGAGCCACATCGTC
ACGAGGGCATCTTCATCGCACGCGGCAAAGAAGACGCGCTGGTTACGCTAAATCTGGTGC
CCGGCTCGGAGGTGTACGGCGAGAAGCGCATTTCGGTTGAGAACGAAGGGGACAAGAAGG
AGTACCGCGTGTGGAACCCGTTCCGATCGAAGCTGGCGGCGGCCGTGCTCGGCGGCGTTG
ACAAGATTCACATGCCGCCCGGCTCGAAGGTGCTGTACCTGGGTGCCGCCTCCGGCACGA
CCGTCTCGCACGTGTCGGACATCGTCGGCCCCGGAGGGCTGGTGTACGC

consensusID : consensus_9072#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 470
fasta sequence

                              [GCAGACTGTACCAATTCGGCATTGAATTAGAAATTTTCCGTTCCCGGAACCCGTGCAAGTGCGCTTAATTGGCAGCAAAAGCCGAAAGTGGCAAAGTAGCTGCAAAAACGTGCTAGTTCAGTGACATTTTCATCTCATAATGGGCAGACCAGGATTCTCTCCCAGAGGTGGCGGAGGTTTCGGCACGACCGTCTCGCACGTGTCGGACATCGTCGGCCCGGAGGGCTGGTGTACGCGGTCGAGTTCTCGCACCGGTCCGGGCGCGATCTGCTCAATGTGGCGAAGAAGCGCACCAACATCATCCCCATCATCGAGGACGCGCGCCATCCGCACAAGTACCGCATGCTGGTCGGCATGGTCGATACCGTGTTTGCCGATGTGGCCCAGCCGGATCTATTCCCGTATCGTGGCGCTGAATGCACAAAACTTCCTCAAGAACGGTGGCCACTTTGTCATCTCCATCAAGGCGT]

[+] EMBL CNS08CKL             [GCAGACTGTACCAATTCGGCATTGAATTAGAAATTTTCCGTTCCCGGAACCCGTGCAAGTGCGCTTAATTGGCAGCAAAAGCCGAAAGTGGCAAAGTAGCTGCAAAAACGTGCTAGTTCAGTGACATTTTCATCTCATAATGGGCAGACCAGGATTCTCTCCCAGAGGTGGCGGAGGTTTCGGCACGACCGTCTCGCACGTGTCGGACATCGTCGGCCCGGAGGGCTGGTGTACGCGGTCGAGTTCTCGCACCGGTCCGGGCGCGATCTGCTCAATGTGGCGAAGAAGCGCACCAACATCATCCCCATCATCGAGGACGCGCGCCATCCGCACAAGTACCGCATGCTGGTCGGCATGGTCGATACCGTGTTTGCCGATGTGGCCCAGCCGGATCTATTCCCGTATCGTGGCGCTGAATGCACAAAACTTCCTCAAGAACGGTGGCCACTTTGTCATCTCCATCAAGGCGT]




>consensus_9072#3
GCAGACTGTACCAATTCGGCATTGAATTAGAAATTTTCCGTTCCCGGAACCCGTGCAAGT
GCGCTTAATTGGCAGCAAAAGCCGAAAGTGGCAAAGTAGCTGCAAAAACGTGCTAGTTCA
GTGACATTTTCATCTCATAATGGGCAGACCAGGATTCTCTCCCAGAGGTGGCGGAGGTTT
CGGCACGACCGTCTCGCACGTGTCGGACATCGTCGGCCCGGAGGGCTGGTGTACGCGGTC
GAGTTCTCGCACCGGTCCGGGCGCGATCTGCTCAATGTGGCGAAGAAGCGCACCAACATC
ATCCCCATCATCGAGGACGCGCGCCATCCGCACAAGTACCGCATGCTGGTCGGCATGGTC
GATACCGTGTTTGCCGATGTGGCCCAGCCGGATCTATTCCCGTATCGTGGCGCTGAATGC
ACAAAACTTCCTCAAGAACGGTGGCCACTTTGTCATCTCCATCAAGGCGT

consensusID : consensus_9072#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 414
fasta sequence

                              [GGCAAGAATCGGCACGAGGAAGTAACGCACGCTGTTTTTGGGCTGCGGCTACAGCGTGCAGAGCTGTACCAATTCGGCATTGAATTAGAAATTTTCCGTTCCCGGAACCCGTGCAAGTGCGCTTAATTGGCAGCAAAAGCCGAAAGTGGCAAAGTAGCTGCAAAAACGTGCTAGTTCAGTGAAATTTTCATCTCATAATGGGCAGACCAGGATTCTCTCCCAGAGGTGGCGGTGGTCGTGGAGGAGGCGGTGACCGGGGTGGACGCGGCGGCTTCGGTGGCCGTGGACGCGGTGGCGGTGATCGCGGTGGTCGTGGAGGTTTCGGTGGTGGTCGCGGCCGAGGCGGCGGTGGTCGTGGTGGACCGGGTGGACGGGGCCTGCGGTGGTGGCCTGTGGCGGACCGGGTGGCCGCGG]

[+] EMBL AL934553             [GGCAAGAATCGGCACGAGGAAGTAACGCACGCTGTTTTTGGGCTGCGGCTACAGCGTGCAGAGCTGTACCAATTCGGCATTGAATTAGAAATTTTCCGTTCCCGGAACCCGTGCAAGTGCGCTTAATTGGCAGCAAAAGCCGAAAGTGGCAAAGTAGCTGCAAAAACGTGCTAGTTCAGTGAAATTTTCATCTCATAATGGGCAGACCAGGATTCTCTCCCAGAGGTGGCGGTGGTCGTGGAGGAGGCGGTGACCGGGGTGGACGCGGCGGCTTCGGTGGCCGTGGACGCGGTGGCGGTGATCGCGGTGGTCGTGGAGGTTTCGGTGGTGGTCGCGGCCGAGGCGGCGGTGGTCGTGGTGGACCGGGTGGACGGGGCCTGCGGTGGTGGCCTGTGGCGGACCGGGTGGCCGCGG]




>consensus_9072#4
GGCAAGAATCGGCACGAGGAAGTAACGCACGCTGTTTTTGGGCTGCGGCTACAGCGTGCA
GAGCTGTACCAATTCGGCATTGAATTAGAAATTTTCCGTTCCCGGAACCCGTGCAAGTGC
GCTTAATTGGCAGCAAAAGCCGAAAGTGGCAAAGTAGCTGCAAAAACGTGCTAGTTCAGT
GAAATTTTCATCTCATAATGGGCAGACCAGGATTCTCTCCCAGAGGTGGCGGTGGTCGTG
GAGGAGGCGGTGACCGGGGTGGACGCGGCGGCTTCGGTGGCCGTGGACGCGGTGGCGGTG
ATCGCGGTGGTCGTGGAGGTTTCGGTGGTGGTCGCGGCCGAGGCGGCGGTGGTCGTGGTG
GACCGGGTGGACGGGGCCTGCGGTGGTGGCCTGTGGCGGACCGGGTGGCCGCGG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9072#0      ---------TGGCATCCCAAAAGTAAACGCACGTGTTTTTGGGCTGCGGTACAGCGTGCA 51
consensus_9072#2      ------------------------------------------------------------
consensus_9072#1      ------------------------------------------------------------
consensus_9072#4      GGCAAGAATCGGCACGAGGAAGTAACGCACGCTGTTTTTGGGCTGCGGCTACAGCGTGCA 60
consensus_9072#3      ----------------------------------------------------------GC 2
                                                                                  

consensus_9072#0      GAGCTGTACCAATTCGGCATTGAATTAGAAATTTTCCGTTCCCGGAACCCGTGCAAGTGC 111
consensus_9072#2      ------------------------------------------------------------
consensus_9072#1      ----CCGCGGACGCGTGGGTTGAATTAGAAATTTTCCATTCCCGGAACCCGTGCAAGTGC 56
consensus_9072#4      GAGCTGTACCAATTCGGCATTGAATTAGAAATTTTCCGTTCCCGGAACCCGTGCAAGTGC 120
consensus_9072#3      AGACTGTACCAATTCGGCATTGAATTAGAAATTTTCCGTTCCCGGAACCCGTGCAAGTGC 62
                                                                                  

consensus_9072#0      GCTTAATTGGCAGCAAAAGCCGAAAGTGGCAAAGTAGCTGCAAAAACGTGCTAGTTCAGT 171
consensus_9072#2      ------------------------------------------------------------
consensus_9072#1      GCTTAATTGGCAGCAAAAGCCGAAAGTGGCAAAGTAGCTGCAAAAACGTGCTAGTTCAGT 116
consensus_9072#4      GCTTAATTGGCAGCAAAAGCCGAAAGTGGCAAAGTAGCTGCAAAAACGTGCTAGTTCAGT 180
consensus_9072#3      GCTTAATTGGCAGCAAAAGCCGAAAGTGGCAAAGTAGCTGCAAAAACGTGCTAGTTCAGT 122
                                                                                  

consensus_9072#0      GACATTTTCATCTCATAATGGGCAGACCAGGATTCTCTCCCAGAGGTGGCGGTGGTCGTG 231
consensus_9072#2      ------TTCATCTCATAATGGGCAGACCAGGATTCTCTCCCAGAGGTGGCGGTGGTCGTG 54
consensus_9072#1      GAAATTTTCATCTCATAATGGGCAGACCAGGATTCTCTCCCAGAGGTGGCGGTGGTCGTG 176
consensus_9072#4      GAAATTTTCATCTCATAATGGGCAGACCAGGATTCTCTCCCAGAGGTGGCGGTGGTCGTG 240
consensus_9072#3      GACATTTTCATCTCATAATGGGCAGACCAGGATTCTCTCCCAGAGGTGGCGGAGGTTTCG 182
                            ********************************************** ***   *

consensus_9072#0      GAGGAGGCGGT--GACCGGGGCGGACG-CGGCGGCTTCGGTGGCCG-TGGACGCGGTGGC 287
consensus_9072#2      GAGGAGGCGGT--GACCGGGGCGGACG-CGGCGGCTTCGGTGGCCG-TGGACGCGGTGGC 110
consensus_9072#1      GAGGAGGCGGT--GACCGGGGCGGACG-TGGTGGCTTCGGTGGCCG-TGGACGCGGTGGC 232
consensus_9072#4      GAGGAGGCGGT--GACCGGGGTGGACG-CGGCGGCTTCGGTGGCCG-TGGACGCGGTGGC 296
consensus_9072#3      GCACGACCGTCTCGCACGTGTCGGACATCGTCGGCCCGGAGGGCTGGTGTACGCGGTCG- 241
                      *      **    *  ** *  ****   *  ***   *  *** * ** ******* * 

consensus_9072#0      GGTGATCGCGGTGGCCGCGGAG-GTTTCGGTGGTGGTCGCGGCCGCGGCGGCGGTGGTCG 346
consensus_9072#2      GGTGATCGCGGTGGCCGCGGAG-GTTTCGGTGGTGG------------------------ 145
consensus_9072#1      GGTGATCGCGGTGGTCGTGGAG-GTTTCGGTGGTGGTCGCGGCCGAGGCGGCGGTGGTCG 291
consensus_9072#4      GGTGATCGCGGTGGTCGTGGAG-GTTTCGGTGGTGGTCGCGGCCG--------------- 340
consensus_9072#3      AGTTCTCGCACCGGTCCGGGCGCGATCTGCTCAATGTGGCGAAGAAG------------- 288
                       **  ****   ** *  ** * * *  * *    *                        

consensus_9072#0      TGGTGGACCGGGCGGACGGGGCCGCGGTGGCGGCCGTGGCGGACCGGGTGGCCGCGGGGG 406
consensus_9072#2      ---------------------CCGCGGTGGCGGCCGTGGCGGACCGGGTGGCCGCGGGGG 184
consensus_9072#1      TGGTGGACCGGGTGGACGGGGCCGTGGTGGCGGCCGTGGCGGACCGGGTGGCCGCGGGGG 351
consensus_9072#4      ---------------------AGGCGGCGGTGGTCGTGGTGGACCGGGTGG--ACGGGGC 377
consensus_9072#3      --------CGCACCAACATCATCCCCATCATCGAGGACGCGCGCCATCCG--CACAAGTA 338
                                                      *  *  * *  **    *    *  *  

consensus_9072#0      TGGCAAGATGGGTGGTTTCAAGGGGGGCAAATCTGTCGTCATCGAGCCACATCGTCACGA 466
consensus_9072#2      TGGCAAGATGGGTGGTTTCAAGGGGGGCAAATCTGTCGTCATCGAGCCACATCGTCACGA 244
consensus_9072#1      CGGCAAGATGGGTGGCTTCAAGGGGGGCAAATCCGTCGTCATCGAGCCGCATCGTCACGA 411
consensus_9072#4      CTGCGGT---GGTGGCCT-----GTGGCGGACCGGGTGGCCGCGG--------------- 414
consensus_9072#3      CCGCATGCTGGTCGGCAT------GGTCGATACCGTGTTTGCCGATGTGGCCCAGC-CGG 391
                        **      *  **  *       * *    * *       **                

consensus_9072#0      GGGCATCTTCATCGCACGCGGCAAGGAAGACGCGCTGGTTACGCTGAACCTGGTGCCCGG 526
consensus_9072#2      GGGCATCTTCATCGCACGCGGCAAAGAAGACGCGCTGGTTACGCTAAATCTGGTGCCCGG 304
consensus_9072#1      GGGCATCTTCATCGCACGCGGCAAGGAAGACGCGCTGGTTACGCTGAACCTGGTGCCAGG 471
consensus_9072#4      ------------------------------------------------------------
consensus_9072#3      ATCTATTCCCGTATC--GTGGCGCTGAATGCACAAAACTTCCTCAAGAACGGTGGCC--A 447
                                                                                  

consensus_9072#0      CTCGGAGGTGTACGGCGAGAAGCGCATTTCGGTTGAGAACGAAGGGGACAAGAAGGAGTA 586
consensus_9072#2      CTCGGAGGTGTACGGCGAGAAGCGCATTTCGGTTGAGAACGAAGGGGACAAGAAGGAGTA 364
consensus_9072#1      CTCGGAGGTGTACGGCGAGAAGCGCATTTCGGTTGAGAACGAAGGGGACAAGAAGGAGTA 531
consensus_9072#4      ------------------------------------------------------------
consensus_9072#3      CTTTGTCATCTCCATCAAGGCGT------------------------------------- 470
                                                                                  

consensus_9072#0      CCGCGTGTGGAACCCGTTCCGATCGAAGCTGGCGGCGGCCGTGCTCGGCGGCGTTGACAA 646
consensus_9072#2      CCGCGTGTGGAACCCGTTCCGATCGAAGCTGGCGGCGGCCGTGCTCGGCGGCGTTGACAA 424
consensus_9072#1      CCGCGTGTGGAACCCGTTCCGATCGAAGCTGGCGGCGGCCGTGCTCGGCGGCGTTGACAA 591
consensus_9072#4      ------------------------------------------------------------
consensus_9072#3      ------------------------------------------------------------
                                                                                  

consensus_9072#0      GATTCACATGCCGCCCGGCTCGAAGGTGCTGTACCTGGGTGCCGCCTCCGGCACGACCGT 706
consensus_9072#2      GATTCACATGCCGCCCGGCTCGAAGGTGCTGTACCTGGGTGCCGCCTCCGGCACGACCGT 484
consensus_9072#1      GATTCACATGCC------------------------------------------------ 603
consensus_9072#4      ------------------------------------------------------------
consensus_9072#3      ------------------------------------------------------------
                                                                                  

consensus_9072#0      CTCGCACGTGTCGGACATCGTCGGCCCGGAGGGGCTGGTGTACGCGGTCGAGTTCTCGCA 766
consensus_9072#2      CTCGCACGTGTCGGACATCGTCGGCCCCGGAGGGCTGGTGTACGC--------------- 529
consensus_9072#1      ------------------------------------------------------------
consensus_9072#4      ------------------------------------------------------------
consensus_9072#3      ------------------------------------------------------------
                                                                                  

consensus_9072#0      CCGGTCCGGGCGCGATCTGCTCAATGTGGCGAAGAAGCGCACCAACATCATCCCCATCAT 826
consensus_9072#2      ------------------------------------------------------------
consensus_9072#1      ------------------------------------------------------------
consensus_9072#4      ------------------------------------------------------------
consensus_9072#3      ------------------------------------------------------------
                                                                                  

consensus_9072#0      CGAGGACGCGCGCCATCCGCACAAGTACCGCATGCTGGTCGGCATGGTCGATACCGTGTT 886
consensus_9072#2      ------------------------------------------------------------
consensus_9072#1      ------------------------------------------------------------
consensus_9072#4      ------------------------------------------------------------
consensus_9072#3      ------------------------------------------------------------
                                                                                  

consensus_9072#0      TGCCGATGTGGCCCAGCCGGATCAGGCCCGTATCGTGGCGCTCAATGCGCACAACTTCCT 946
consensus_9072#2      ------------------------------------------------------------
consensus_9072#1      ------------------------------------------------------------
consensus_9072#4      ------------------------------------------------------------
consensus_9072#3      ------------------------------------------------------------
                                                                                  

consensus_9072#0      CAAGAACGGTGGCCACTTTGTCATCTCCATCAAGGCGTCCTGCATCGACTCGACCGCCGT 1006
consensus_9072#2      ------------------------------------------------------------
consensus_9072#1      ------------------------------------------------------------
consensus_9072#4      ------------------------------------------------------------
consensus_9072#3      ------------------------------------------------------------
                                                                                  

consensus_9072#0      CCCCGAGGCGGTGTTCGCGGCGGAGGTGAAGAAGCTGCAATCGGAAAAGCTAAAACCGCA 1066
consensus_9072#2      ------------------------------------------------------------
consensus_9072#1      ------------------------------------------------------------
consensus_9072#4      ------------------------------------------------------------
consensus_9072#3      ------------------------------------------------------------
                                                                                  

consensus_9072#0      GGAACAGATCACGCTCGAGCCGTACGAGCGTGACCACGCGGTAGTGGTGGGCGTGTACCG 1126
consensus_9072#2      ------------------------------------------------------------
consensus_9072#1      ------------------------------------------------------------
consensus_9072#4      ------------------------------------------------------------
consensus_9072#3      ------------------------------------------------------------
                                                                                  

consensus_9072#0      ACCACCGCCGAAGGCTGCGGCATAAGAGCGGGCAGGCGGGCGGGCGGGACAGGTCGGTGG 1186
consensus_9072#2      ------------------------------------------------------------
consensus_9072#1      ------------------------------------------------------------
consensus_9072#4      ------------------------------------------------------------
consensus_9072#3      ------------------------------------------------------------
                                                                                  

consensus_9072#0      AGAGGTCCGTTAGGTTATTAAGGGGTCTTGTTAGTGTATAAGAACCAAAATTGCTTCTAT 1246
consensus_9072#2      ------------------------------------------------------------
consensus_9072#1      ------------------------------------------------------------
consensus_9072#4      ------------------------------------------------------------
consensus_9072#3      ------------------------------------------------------------
                                                                                  

consensus_9072#0      ATTTCACCCAACAACCTCGGCGATTTAGCGGCAGCAGAGGGCTGTGTACGGTGGATCAAA 1306
consensus_9072#2      ------------------------------------------------------------
consensus_9072#1      ------------------------------------------------------------
consensus_9072#4      ------------------------------------------------------------
consensus_9072#3      ------------------------------------------------------------
                                                                                  

consensus_9072#0      CTTCAAACTAAGGAACACAAAACAAATCTATGTCTATGTATACACAGTACATAAAAGAAG 1366
consensus_9072#2      ------------------------------------------------------------
consensus_9072#1      ------------------------------------------------------------
consensus_9072#4      ------------------------------------------------------------
consensus_9072#3      ------------------------------------------------------------
                                                                                  

consensus_9072#0      AGACATGCAGGTCGAGATGCAAACGAGTGCGAGTGGTTTAATTTTAGCATTTGTTTTTTT 1426
consensus_9072#2      ------------------------------------------------------------
consensus_9072#1      ------------------------------------------------------------
consensus_9072#4      ------------------------------------------------------------
consensus_9072#3      ------------------------------------------------------------
                                                                                  

consensus_9072#0      TTCTCTGTGGGATATAATGACCCACTACGACAAATTGAAAATAA 1470
consensus_9072#2      --------------------------------------------
consensus_9072#1      --------------------------------------------
consensus_9072#4      --------------------------------------------
consensus_9072#3      --------------------------------------------