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Anopheles gambiae
cluster # 9073 cluster # 9073       Sequences # 14       consensus # 5


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9073#0 length = 798 sequences # 1  
consensus_9073#1 length = 791 sequences # 7  
consensus_9073#2 length = 788 sequences # 1  
consensus_9073#3 length = 767 sequences # 3  
consensus_9073#4 length = 642 sequences # 2  

consensusID : consensus_9073#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 798
fasta sequence
                              [CCGAGGTTAACGAAAAATCTCACTAGTCAAGCTTTAGTATAACTTTCAGAACTACCTCATCACTGCCCACATGATGTTCGCCCTCCGAATTGCCTCCCGAATGGGCCAGCGCGTACGATCGCGCTCCATCGCCAGCCTGTCGGCACTTCCGGATACGCACCAGATGCTGCAGAAAACCTGCCGCGATTTTGCGGACAATGAGCTGGTGCCGAATGCGGCCGGTTCGATCGGGAGCACCTTTACCCGGCCGAGCAGATCCTGTAAGATGGGTGAGCTCGGGCTGATGGCAATCTCGGTGAAGGAAGAGTACGGCGGTACCTGGTCTGGACTACGTCGCGTACGCCATCGCGATGGACGGACAATTTCGCGCGGATGCGCCTCGGCCGGTGTCATCATGTCGGTAAACCAATTCACTGTACCTGGGACCGCTGACGCATTTCGGCAACGAACAGCAACAGCAAAAATACGTCACCGAGTACACCGATGGGTACGCGGTACGGATGCTTTGGCCTGTCCGAGCCGGGCACCGGTCGGATTGCGGGTTGCCGCCTCCACGGAACGGGCCACGCTTCCCAAGGGAGCGAAACNCAAANGCNGGGAGCGTGGCTGAAACCAGGGTCAACCGCAAACGATTGGNCGGGAAATACAACCGCAAACCGCGGNGCNNACCGAAGCGGCCCCGCGCTAGCACGGCGCCCGCACNGCATAGCACACGGCNCAACACCACGGGACGCAAACACACCCGACATCNNAAGCACCACAACGGGCCCATTCATCCCCGCGCATCACAAACCCGAT]

[+] EMBL AL929855             [CCGAGGTTAACGAAAAATCTCACTAGTCAAGCTTTAGTATAACTTTCAGAACTACCTCATCACTGCCCACATGATGTTCGCCCTCCGAATTGCCTCCCGAATGGGCCAGCGCGTACGATCGCGCTCCATCGCCAGCCTGTCGGCACTTCCGGATACGCACCAGATGCTGCAGAAAACCTGCCGCGATTTTGCGGACAATGAGCTGGTGCCGAATGCGGCCGGTTCGATCGGGAGCACCTTTACCCGGCCGAGCAGATCCTGTAAGATGGGTGAGCTCGGGCTGATGGCAATCTCGGTGAAGGAAGAGTACGGCGGTACCTGGTCTGGACTACGTCGCGTACGCCATCGCGATGGACGGACAATTTCGCGCGGATGCGCCTCGGCCGGTGTCATCATGTCGGTAAACCAATTCACTGTACCTGGGACCGCTGACGCATTTCGGCAACGAACAGCAACAGCAAAAATACGTCACCGAGTACACCGATGGGTACGCGGTACGGATGCTTTGGCCTGTCCGAGCCGGGCACCGGTCGGATTGCGGGTTGCCGCCTCCACGGAACGGGCCACGCTTCCCAAGGGAGCGAAACNCAAANGCNGGGAGCGTGGCTGAAACCAGGGTCAACCGCAAACGATTGGNCGGGAAATACAACCGCAAACCGCGGNGCNNACCGAAGCGGCCCCGCGCTAGCACGGCGCCCGCACNGCATAGCACACGGCNCAACACCACGGGACGCAAACACACCCGACATCNNAAGCACCACAACGGGCCCATTCATCCCCGCGCATCACAAACCCGAT]


>consensus_9073#0 CCGAGGTTAACGAAAAATCTCACTAGTCAAGCTTTAGTATAACTTTCAGAACTACCTCAT CACTGCCCACATGATGTTCGCCCTCCGAATTGCCTCCCGAATGGGCCAGCGCGTACGATC GCGCTCCATCGCCAGCCTGTCGGCACTTCCGGATACGCACCAGATGCTGCAGAAAACCTG CCGCGATTTTGCGGACAATGAGCTGGTGCCGAATGCGGCCGGTTCGATCGGGAGCACCTT TACCCGGCCGAGCAGATCCTGTAAGATGGGTGAGCTCGGGCTGATGGCAATCTCGGTGAA GGAAGAGTACGGCGGTACCTGGTCTGGACTACGTCGCGTACGCCATCGCGATGGACGGAC AATTTCGCGCGGATGCGCCTCGGCCGGTGTCATCATGTCGGTAAACCAATTCACTGTACC TGGGACCGCTGACGCATTTCGGCAACGAACAGCAACAGCAAAAATACGTCACCGAGTACA CCGATGGGTACGCGGTACGGATGCTTTGGCCTGTCCGAGCCGGGCACCGGTCGGATTGCG GGTTGCCGCCTCCACGGAACGGGCCACGCTTCCCAAGGGAGCGAAACNCAAANGCNGGGA GCGTGGCTGAAACCAGGGTCAACCGCAAACGATTGGNCGGGAAATACAACCGCAAACCGC GGNGCNNACCGAAGCGGCCCCGCGCTAGCACGGCGCCCGCACNGCATAGCACACGGCNCA ACACCACGGGACGCAAACACACCCGACATCNNAAGCACCACAACGGGCCCATTCATCCCC GCGCATCACAAACCCGAT



consensusID : consensus_9073#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 791
fasta sequence
                              [CCGCCCACGCGTCCGAAAAACAATCTCAACTAGTAAGCTTTTAGTATAACTTTCAGAACTACCTCATCACTGCCCACATGATGTTCGCCCTCCGAATTGCCTCCCGAATGGGCCAGCGCGTCCGATCGCGCTCCATCGCCAGCCTGTCGGCACTTCCGGATACGCACCAGATGCTGCAGAAAACCTGCCGCGATTTTGCGGACAATGAGCTGGTGCCGAATGCGGCCCGGTTCGATCGGGAGCACCTTTACCCGGCCGAGCAGATCCGCAAGATGGGTGAGCTCGGGCTGATGGCAATCTCGGTGAAGGAAGAGTACGGCGGTACCGGTCTGGACTACGTCGCGTACGCCATCGCGATGGAGGAAATTTCGCGCGGATGCGCCTCGGCCGGTGTCATCATGTCGGTAAACAATTCACTGTACCTGGGACCGCTGACGCATTTCGGCAACGAACAGCAACAGCAAAAATACGTCACCGAGTACACCGATGGGTCGCGGGTCGGTTGCTTTGCCCTGTCCGAGCCGGGCAACGGGTCGGATGCGGGTGCCGCCTCCACGACGGCCACGCTCAAGGGCGACCACTGGGTGCTGAACGGTACGAAGTGTTGGATCACGAACGGGTACGAGGCCGGTGCGGCCGTCGTGTTTGCCACCACGGACAAATCGCTCAAGCACAAGGGCATTTCCGCGTTCATCGTGCCGAANGAGACGCCCGGCTTTTCGCTCGGCAAGAAGGANGACAAGCTGGGCATCCGGGGCTCCTCCACCTGCTCGCTCATCTTCGANGACTGT]

[+] EMBL BM590252             [CCGCCCACGCGTCCGAAAAACAATCTCAACTAGTAAGCTTTTAGTATAACTTTCAGAACTACCTCATCACTGCCCACATGATGTTCGCCCTCCGAATTGCCTCCCGAATGGGCCAGCGCGTCCGATCGCGCTCCATCGCCAGCCTGTCGGCACTTCCGGATACGCACCAGATGCTGCAGAAAACCTGCCGCGATTTTGCGGAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL BX622841             [                  AACAATCTCAACTAGTAAGCTTTTAGTATAACTTTCAGAACTACCTCATCACTGCCCACATGATGTTCGCCCTCCGAATTGCCTCCCGAATGGGCCAGCGCGTCCGATCGCGCTCCATCGCCAGCCTGTCGGCACTTCCGGATACGCACCAGATGCTGCAGAAAACCTGCCGCGATTTTGCGGACAATGAGCTGGTGCCGAATGCGGCCCGGTTCGATCGGGAGCACCTTTACCCGGCCGAGCAGATCCGCAAGATGGGTGAGCTCGGGCTGATGGCAATCTCGGTGAAGGAAGAGTACGGCGGTACCGGTCTGGACTACGTCGCGTACGCCATCGCGATGGAGGAAATTTCGCGCGGATGCGCCTCGGCCGGTGTCATCATGTCGGTAAACAATTCACTGTACCTGGGACCGCTGACGCATTTCGGCAACGAACAGCAACAGCAAAAATACGTCACCGAGTACACCGATGGGTCGCGGGTCGGTTGCTTTGCCCTGTCCGAGCCGGGCAACGGGTCGGATGCGGGTGCCGCCTCCACGACGGCCACGCTCAAGGGCGACCACTGGGTGCTGAACGGTACGAAGTGTTGGATCACGAACGGGTACGANGCCGGTGCGGCCGTCGTGTTTGCCACCACGGACAAATCGCTCAAGCACAAGGGCA                                                                                                              ]
[+] EMBL BX622173             [                       TCTCAACTAGTAAGCTTTTAGTATAACTTTCAGAACTACCTCATCACTGCCCACATGATGTTCGCCCTCCGAATTGCCTCCCGAATGGGCCAGCGCGTCCGATCGCGCTCCATCGCCAGCCTGTCGGCACTTCCGGATACGCACCAGATGCTGCAGAAAACCTGCCGCGATTTTGCGGACAATGAGCTGGTGCCGAATGCGGCCCGGTTCGATCGGGAGCACCTTTACCCGGCCGAGCAGATCCGCAAGATGGGTGAGCTCGGGCTGATGGCAATCTCGGTGAAGGAAGAGTACGGCGGTACCGGTCTGGACTACGTCGCGTACGCCATCGCGATGGAGGAAATTTCGCGCGGATGCGCCTCGGCCGGTGTCATCATGTCGGTAAACAATTCACTGTACCTGGGACCGCTGACGCATTTCGGCAACGAACAGCAACAGCAAAAATACGTCACCGAGTACACCGATGGGTCGCGGGTCGGTTGCTTTGCCCTGTCCGAGCCGGGCAACGGGTCGGATGCGGGTGCCGCCTCCACGACGGCCACGCTCAAGGGCGACCACTGGGTGCTGAACGGTACGAAGTGTTGGATCACGAACGGGTACGAAGCCGGTGCGGCCGTCGTGTTTGCCACCACGGACAAATCGCTCAAGCACAAGGGCATTTCCGC                                                                                                       ]
[+] EMBL BX604797             [                        CTCAACTAGTAAGCTTTAAGTATAACTTTCAGAACTACCTCATCACTGCCCACATGATGTTCGCCCTCCGAATTGCCTCCCGAATGGGCCAGCGCGTCCGATCGCGTTCCATCGCCAGCCTGTCGGCACTTCCGGATACGCACCAGATGCTGCAGAAAACCTGCCGCGACTTTGCGGACAATGAACTGGTGCCGAATGCGGCCCGGTTCGATCGGGAGCACCTTTACCCGGCCGAGCAGATCCGCAAGATGGGTGAGCTCGGGCTGATGGCAATCTCGGTAAAGGAAGAGTACGGCGGTACCGGTCTGGACTACGTCGCGTACGCCATCGCGATGGAGGAAATTTCGCGCGGATGCGCCTCGGCCGGTGTCATCATGTCGGTAAACAATTCACTGTACCTGGGACCGCTGACGCATTTCGGCAACGAACAGCAACAGCAAAAATACGTCACCGAGTACACCGATGGGTCGCGGGTCGGTTGCTTTGCCCTGTCCGAGCCGGGCAACGGGTCGGATGCGGGTGCCGCCTCCACGACGGCCACGCTCAAGGGCGACCACTGGGTGCTGAACGGTACTAAGTGTTGGATCACGAACGGGTACGAGGCCGGTGCGGCCGTCGTGTTTGCCACCACGGACAAATCGCTCAAGCACAAGGG                                                                                                                ]
[+] EMBL BX628289             [                                  AAGCTTTAAGTATAACTTTCAGAACTACCTCATCACTGCCCACATGATGTTCGCCCTCCGAATTGCCTCCCGAATGGGCCAGCGCGTCCGATCGCGTTCCATCGCCAGCCTGTCGGCACTTCCGGATACGCACCAGATGCTGCAGAAAACCTGCCGCGACTTTGCGGACAATGAACTGGTGCCGAATGCGGCCCGGTTCGATCGGGAGCACCTTTACCCGGCCGAGCAGATCCGCAAGATGGGTGAGCTCGGGCTGATGGCAATCTCGGTAAAGGAAGAGTACGGCGGTACCGGTCTGGACTACGTCGCGTACGCCATCGCGATGGAGGAAATTTCGCGCGGATGCGCCTCGGCCGGTGTCATCATGTCGGTAAACAATTCACTGTACCTGGGACCGCTGACGCATTTCGGCAACGAACAGCAACAGCAAAAATACGTCACCGAGTACACCGATGGGTCGCGGGTCGGTTGCTTTGCCCTGTCCGAGCCGGGCAACGGGTCGGATGCGGGTGCCGCCTCCACGACGGCCACGCTCAAGGGCGACCA                                                                                                                                                                                                                   ]
[+] EMBL BX628668             [                                      TTTTAGTATAACTTTCAGAACTACCTCATCACTGCCCACATGATGTTCGCCCTCCGAATTGCCTCCCGAATGGGCCAGCGCGTCCGATCGCGCTCCATCGCCAGCCTGTCGGCACTTCCGGATACGCACCAGATGCTGCAGAAAACCTGCCGCGATTTTGCGGACAATGAGCTGGTGCCGAATGCGGCCCGGTTCGATCGGGAGCACCTTTACCCGGCCGAGCAGATCCGCAAGATGGGTGAGCTCGGGCTGATGGCAATCTCGGTGAAGGAAGAGTACGGCGGTACCGGTCTGGACTACGTCGCGTACGCCATCGCGATGGAGGAAATTTCGCGCGGATGCGCCTCGGCCGGTGTCATCATGTCGGTAAACAATTCACTGTACCTGGGACCGCTGACGCATTTCGGCAACGAACAGCAACAGCAAAAATACGTCACCGAGTACACCGATGGGTCGCGGGTCGGTTGCTTTGCCCTGTCCGAGCCGGGCAACGGGTCGGATGCGGGTGCCGCCTCCACGACGGCCACGCTCAAGGGCGACCACTGGGTGCTGAACGGTACGAAGTGTTGGATCACGAACGGGTACGAGGCCGGTGCGGCCGTCGTGTTTGCCACCACGGACAAATCGCTCAAGCACAAGGGCATTTCCGCGTTCATCGTGCCGAANGAGACGCCCGGCTTTTCGCTCGGCAAGAAGGANGACAAGCTGGGCATCCGGGGCTCCTCCACCTGCTCGCTCATCTTCGANGACTGT]
[+] EMBL BX618626             [                                                                                       CCCTCCGAATTGCCTCCCGAATGGGCCAGCGCGTCCGATCGCGCTCCATCGCCAGCCTGTCGGCACTTCCGGATACGCACCAGATGCTGCAGAAAACCTGCCGCGATTTTGCGGACAATGAGCTGGTGCCGAATGCGGCCCGGTTCGATCGGGAGCACCTTTACCCGGCCGAGCAGATCCGCAAGATGGGTGAGCTCGGGCTGATGGCAATCTCGGTGAAGGAAGAGTACGGCGGTACCGGTCTGGACTACGTCGCGTACGCCATCGCGATGGAGGAAATTTCGCGCGGATGCGCCTCGGCCGGTGTCATCATGTCGGTAAACAATTCACTGTACCTGGGACCGCTGACGCATTTCGGCAACGAACAGCAACAGCAAAAATACGTCACCTAGTACACCGATGGGTCGCGGGTCGGTTGCTTTGCCCTGTCCGAGCCGGGCAACGGGTCGGATGCGGGTGCCGCCTCCACGACGGCCACGCTCAAGGGCGACCACTGGGT                                                                                                                                                                                                             ]


>consensus_9073#1 CCGCCCACGCGTCCGAAAAACAATCTCAACTAGTAAGCTTTTAGTATAACTTTCAGAACT ACCTCATCACTGCCCACATGATGTTCGCCCTCCGAATTGCCTCCCGAATGGGCCAGCGCG TCCGATCGCGCTCCATCGCCAGCCTGTCGGCACTTCCGGATACGCACCAGATGCTGCAGA AAACCTGCCGCGATTTTGCGGACAATGAGCTGGTGCCGAATGCGGCCCGGTTCGATCGGG AGCACCTTTACCCGGCCGAGCAGATCCGCAAGATGGGTGAGCTCGGGCTGATGGCAATCT CGGTGAAGGAAGAGTACGGCGGTACCGGTCTGGACTACGTCGCGTACGCCATCGCGATGG AGGAAATTTCGCGCGGATGCGCCTCGGCCGGTGTCATCATGTCGGTAAACAATTCACTGT ACCTGGGACCGCTGACGCATTTCGGCAACGAACAGCAACAGCAAAAATACGTCACCGAGT ACACCGATGGGTCGCGGGTCGGTTGCTTTGCCCTGTCCGAGCCGGGCAACGGGTCGGATG CGGGTGCCGCCTCCACGACGGCCACGCTCAAGGGCGACCACTGGGTGCTGAACGGTACGA AGTGTTGGATCACGAACGGGTACGAGGCCGGTGCGGCCGTCGTGTTTGCCACCACGGACA AATCGCTCAAGCACAAGGGCATTTCCGCGTTCATCGTGCCGAANGAGACGCCCGGCTTTT CGCTCGGCAAGAAGGANGACAAGCTGGGCATCCGGGGCTCCTCCACCTGCTCGCTCATCT TCGANGACTGT



consensusID : consensus_9073#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 788
fasta sequence
                              [AATCGCCCCGAGGTAATTTGCATTTCTACGGCAAGCAACGAAACAATCTCAACTAGTAAGCTTTTAGTATAACTTTCAGAACTACCTCATCACTGCCCACATGATGTTCGCCCTCCGAATTGCCTCCCGAATGGGCCAGCGCGTCCGATCGCGCTCCATACGCCAGCCTGTCGGCACTTCCGGATACGCACCAGATGCTGCAGAAAACCTGCCGCGATTTTGCGGACAATGAGCTGGTGCCGAATGCGGCCCGGTTCGATCGGGAGCACCTTTACCCGGCCGAGCAGATCCGCAAGATGGGTGAGCTCGGGCTGATGGCAATCTCGGTGAAGGAAGAGTACGGCGGTACCGGTCTGGACTACGTCGCGTACGCCATCGCGATGGAGGAAATTTCGCGCGGATGCGCCTCGGCCGGTGTCATCATGTCGGTAAACAATTCACTGTACCTGGGACCGCTGACGCATTTCGGCAACGAACAGCAACAGCAAAAATACGTCACCGAGTACACCGATGGGTCGCGGGTCGGTTGCCTTGCCCTGTCCGAGACCGGGCAACGGGTCGGATGCGGGTGCCGCTCCACGAACGGACACGCTCAAGGGCGACCACTGGGGTGCTGAACGGGTCACNAAGATGTTGGCACTCACGAAGACGGGTACGANGGCCGGNGNGGACGACGAGTATGGCACCAAGGAACAAAATCAGCNCAANCCACCACAGGGCCATTNCCCGCGGTCCACCCGCGNCCGAAAGGAGACCGCCCGGTATCAGCGCCCGGCCACAACGCGNGG]

[+] EMBL AL930124             [AATCGCCCCGAGGTAATTTGCATTTCTACGGCAAGCAACGAAACAATCTCAACTAGTAAGCTTTTAGTATAACTTTCAGAACTACCTCATCACTGCCCACATGATGTTCGCCCTCCGAATTGCCTCCCGAATGGGCCAGCGCGTCCGATCGCGCTCCATACGCCAGCCTGTCGGCACTTCCGGATACGCACCAGATGCTGCAGAAAACCTGCCGCGATTTTGCGGACAATGAGCTGGTGCCGAATGCGGCCCGGTTCGATCGGGAGCACCTTTACCCGGCCGAGCAGATCCGCAAGATGGGTGAGCTCGGGCTGATGGCAATCTCGGTGAAGGAAGAGTACGGCGGTACCGGTCTGGACTACGTCGCGTACGCCATCGCGATGGAGGAAATTTCGCGCGGATGCGCCTCGGCCGGTGTCATCATGTCGGTAAACAATTCACTGTACCTGGGACCGCTGACGCATTTCGGCAACGAACAGCAACAGCAAAAATACGTCACCGAGTACACCGATGGGTCGCGGGTCGGTTGCCTTGCCCTGTCCGAGACCGGGCAACGGGTCGGATGCGGGTGCCGCTCCACGAACGGACACGCTCAAGGGCGACCACTGGGGTGCTGAACGGGTCACNAAGATGTTGGCACTCACGAAGACGGGTACGANGGCCGGNGNGGACGACGAGTATGGCACCAAGGAACAAAATCAGCNCAANCCACCACAGGGCCATTNCCCGCGGTCCACCCGCGNCCGAAAGGAGACCGCCCGGTATCAGCGCCCGGCCACAACGCGNGG]


>consensus_9073#2 AATCGCCCCGAGGTAATTTGCATTTCTACGGCAAGCAACGAAACAATCTCAACTAGTAAG CTTTTAGTATAACTTTCAGAACTACCTCATCACTGCCCACATGATGTTCGCCCTCCGAAT TGCCTCCCGAATGGGCCAGCGCGTCCGATCGCGCTCCATACGCCAGCCTGTCGGCACTTC CGGATACGCACCAGATGCTGCAGAAAACCTGCCGCGATTTTGCGGACAATGAGCTGGTGC CGAATGCGGCCCGGTTCGATCGGGAGCACCTTTACCCGGCCGAGCAGATCCGCAAGATGG GTGAGCTCGGGCTGATGGCAATCTCGGTGAAGGAAGAGTACGGCGGTACCGGTCTGGACT ACGTCGCGTACGCCATCGCGATGGAGGAAATTTCGCGCGGATGCGCCTCGGCCGGTGTCA TCATGTCGGTAAACAATTCACTGTACCTGGGACCGCTGACGCATTTCGGCAACGAACAGC AACAGCAAAAATACGTCACCGAGTACACCGATGGGTCGCGGGTCGGTTGCCTTGCCCTGT CCGAGACCGGGCAACGGGTCGGATGCGGGTGCCGCTCCACGAACGGACACGCTCAAGGGC GACCACTGGGGTGCTGAACGGGTCACNAAGATGTTGGCACTCACGAAGACGGGTACGANG GCCGGNGNGGACGACGAGTATGGCACCAAGGAACAAAATCAGCNCAANCCACCACAGGGC CATTNCCCGCGGTCCACCCGCGNCCGAAAGGAGACCGCCCGGTATCAGCGCCCGGCCACA ACGCGNGG



consensusID : consensus_9073#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 767
fasta sequence
                              [AGATNGCCGAGGNNAACTACTCATCACTGCCCACATGATGTTCGCCCTCCGAATTGCCTCCCGAATGGGCCAGCGCGT-CGATCGCGCTCCATCGCCAGCCTGTCGGCACTTCCGGATACGCACCAGATGCTGCAGAAAACCTGCCGCGATTTTGCGGACAATGAGCTGGTGCCGAATGCGGCCCGGTTCGATCGGGAGCACCTTTACCCGGCCGAGCAGATCCGCAAGATGGGTGAGCTCGGGCTGATGGCAATCTCGGTGAAGGAAGAGTACGGCGGTACCGGTCTGGACTACGTCGCGTACGCCATCGCGATGGAGGAAATTTCGCGCGGATGCGCCTCGGCCGGTGTCATCATGTCGGTAAACAATTCACTGTACCTGGGACCGCTGACGCATTTCGGCAACGAACAGCAACAGCAAAAATACGTCACCGAGTACACCGATGGGTCGCGGGTCGGTTGCTTTGCCCTGTCCGAGCCGGGCAACGGGTCGGATGCGGGTGCCGCCTCCACGACGGCCACGCTCAAGGGCGACCACTGGGTGCTGAACGGTACGAAGTGTTGGATCACGAACGGGTACGAGGCCGGTGCGGCCGTCGTGTTTGCCACCACGGACAAATCGCTCAAGCACAAGGGCATTTCCGCGTTCATCGTGCCGAAGGAGACGCCCGGCTTTTCGCTCGGCAAGAAGGANGACAAGCTGGGCATCCGGGGCTCCTCCACCTGCTCGCTCATCTTCGAGGACTGTGCGATCCCGANGGAGAATCT]

[+] EMBL AL931558             [AGATNGCCGAGGNNAACTACTCATCACTGCCCACATGATGTTCGCCCTCCGAATTGCCTCCCGAATGGGCCAGCGCGT CGATCGCGCTCCATCGCCAGCCTGTCGGCACTTCCGGATACGCACCAGATGCTGCAGAAAACCTGCCGCGATTTTGCGGACAATGAGCTGGTGCCGAATGCGGCCCGGTTCGATCGGGAGCACCTTTACCCGGCCGAGCAGATCCGCAAGATGGGTGAGCTCGGGCTGATGGCAATCTCGGTGAAGGAAGAGTACGGCGGTACCGGTCTGGACTACGTCGCGTACGCCATCGCGATGGAGGAAATTTCGCGCGGATGCGCCTCGGCCGGTGTCATCATGTCGGTAAACAATTCACTGTACCTGGGACCGCTGACGCATTTCGGCAACGAACAG AACAG                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL BX627461             [                              CCACATGATGTTCGCCCTCCGAATTGCCTCCCGAATGGGCCAGCGCGTCCGATCGCGCTCCATCGCCAGCCTGTCGGCACTTCCGGATACGCACCAGATGCTGCAGAAAACCTGCCGCGATTTTGCGGACAATGAGCTGGTGCCGAATGCGGCCCGGTTCGATCGGGAGCACCTTTACCCGGCCGAGCAGATCCGCAAGATGGGTGAGCTCGGGCTGATGGCAATCTCGGTGAAGGAAGAGTACGGCGGTACCGGTCTGGACTACGTCGCGTACGCCATCGCGATGGAGGAAATTTCGCGCGGATGCGCCTCGGCCGGTGTCATCATGTCGGTAAACAATTCACTGTACCTGGGACCGCTGACGCATTTCGGCAACGAACAGCAACAGCAAAAATACGTCACCGAGTACACCGATGGGTCGCGGGTCGGTTGCTTTGCCCTGTCCGAGCCGGGCAACGGGTCGGATGCGGGTGCCGCCTCCACGACGGCCACGCTCAAGGGCGACCACTGGGTGCTGAACGGTACGAAGTGTTGGATCACGAACGGGTACGAGGCCGGTGCGGCCGTCGTGTTTGCCACCACGGACAAATCGCTCAAGCACAAGGGCATTTCCGCGTTCATCGTGCCGAAGGAGACGCCCGGCTTTTCGCTCGGCAAGAAGGANGACAAGCTGGGCATCCGGGGCTCCTCCACCTGCTCGCTCATCTTCGAGGACTGTGCGATCCCGANGGAGAATCT]
[+] EMBL BX628976             [                                                                                                                                                        TTGCGGACAATGAGCTGGTGCCGAATGCGGCCCGGTTCGATCGGGAGCACCTTTACCCGGCCGAGCAGATCCGCAAGATGGGTGAGCTCGGGCTGATGGCAATCTCGGTGAAGGAAGAGTACGGCGGTACCGGTCTGGACTACGTCGCGTACGCCATCGCGATGGAGGAAATTTCGCGCGGATGCGCCTCGGCCGGTGTCATCATGTCGGTAAACAATTCACTGTACCTGGGACCGCTGACGCATTTCGGCAACGAACAGCAACAGCAAAAATACGTCACCGAGTACACCGATGGGTCGCGGGTCGGTTGCTTTGCCCTGTCCGAGCCGGGCAACGGGTCGGATGCGGGTGCCGCCTCCACGACGGCCACGCTCAAGGGCGACCACTGGGTGCTGAACGGTACGAAGTGTTGGATCACGAACGGGTACGAGGCCGGTGCGGCCGTCGTGTTTGCCACCACGGACAAATCGCTCAAGCACAAGGGCATTTCCGCGTTCATCGTGCCGAAGGAGACGCCCGGCTTTTCGCTCGGCAAGAAGGAGGACAAGCTGGGCATCCGGGGCTCCTCCACCTGCTCGCTCATCTTCGAGGACTGTGCGATCCCGANGGAGAATC ]


>consensus_9073#3 AGATNGCCGAGGNNAACTACTCATCACTGCCCACATGATGTTCGCCCTCCGAATTGCCTC CCGAATGGGCCAGCGCGTCGATCGCGCTCCATCGCCAGCCTGTCGGCACTTCCGGATACG CACCAGATGCTGCAGAAAACCTGCCGCGATTTTGCGGACAATGAGCTGGTGCCGAATGCG GCCCGGTTCGATCGGGAGCACCTTTACCCGGCCGAGCAGATCCGCAAGATGGGTGAGCTC GGGCTGATGGCAATCTCGGTGAAGGAAGAGTACGGCGGTACCGGTCTGGACTACGTCGCG TACGCCATCGCGATGGAGGAAATTTCGCGCGGATGCGCCTCGGCCGGTGTCATCATGTCG GTAAACAATTCACTGTACCTGGGACCGCTGACGCATTTCGGCAACGAACAGCAACAGCAA AAATACGTCACCGAGTACACCGATGGGTCGCGGGTCGGTTGCTTTGCCCTGTCCGAGCCG GGCAACGGGTCGGATGCGGGTGCCGCCTCCACGACGGCCACGCTCAAGGGCGACCACTGG GTGCTGAACGGTACGAAGTGTTGGATCACGAACGGGTACGAGGCCGGTGCGGCCGTCGTG TTTGCCACCACGGACAAATCGCTCAAGCACAAGGGCATTTCCGCGTTCATCGTGCCGAAG GAGACGCCCGGCTTTTCGCTCGGCAAGAAGGANGACAAGCTGGGCATCCGGGGCTCCTCC ACCTGCTCGCTCATCTTCGAGGACTGTGCGATCCCGANGGAGAATCT



consensusID : consensus_9073#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 642
fasta sequence
                              [CCGTTCATACTTTTAGTGAATTTGCATTTCTACGGCAAGCAACGAAACAATCTCAACTAGTAAGCTTTTAGTATAACTTTCAGAACTACCTCATCACTGCCCACATGATGTTCGCCCTCCGAATTGCCTCCCGAATGGGCCAGCGCGTCCGATCGCGCTCCATCGCCAGCCTGTCGGCACTTCCGGATACGCACCAGATGCTGCAGAAAACCTGCCGCGATTTTGCGGACAATGAGCTGGTGCCGAATGCGGCCCGGTTCGATCGGGAGCACCTTTACCCGGCCGAGCAGATCCGCAAGATGGGTGAGCTCGGGCTGATGGCAATCTCGGTGAAGGAAGAGTACGGCGGTACCGGTCTGGACTACGTCGCGTACGCCATCGCGATGGAGGAAATTTCGCGCGGATGCGCCTCGGCCGGTGTCATCATGTCGGTAAACAATTCACTGTACCTGGGACCGCTGACGCATTTCGGCAACGAACAGCAACAGCAAAAATACGTCACCGAGTACACCGATGGGTCGCGGGTCGGTTGCTTTGCCCTGTCCGAGCCGGGCAACGGGTCGGATGCGGGTGCCGCCTCCACGACGGNCACGCTCAAGGGCGACCACTGGGTGCTGAACGGTACGAAGTGTTGGATCACGA]

[+] EMBL BX626379             [CCGTTCATACTTTTAGTGAATTTGCATTTCTACGGCAAGCAACGAAACAATCTCAACTAGTAAGCTTTTAGTATAACTTTCAGAACTACCTCATCACTGCCCACATGATGTTCGCCCTCCGAATTGCCTCCCGAATGGGCCAGCGCGTCCGATCGCGCTCCATCGCCAGCCTGTCGGCACTTCCGGATACGCACCAGATGCTGCAGAAAACCTGCCGCGATTTTGCGGACAATGAGCTGGTGCCGAATGCGGCCCGGTTCGATCGGGAGCACCTTTACCCGGCCGAGCAGATCCGCAAGATGGGTGAGCTCGGGCTGATGGCAATCTCGGTGAAGGAAGAGTACGGCGGTACCGGTCTGGACTACGTCGCGTACGCCATCGCGATGGAGGAAATTTCGCGCGGATGCGCCTCGGCCGGTGTCATCATGTCGGTAAACAATTCACTGTACCTGGGACCGCTGACGCATTTCGGCAACGAACAGCAACAGCAAAAATACGTCACCGAGTACACCGATGGGTCGCGGGTCGGTTGCTTTGCCCTGTCCGAGCCGGGCAACGGGTCGGATGCGGGTGCCGCCTCCACGACGGNCACGCTCAAGGGCGACCACTGGGTGCTGAACGGTACGAAGTGTTGGATCACGA]
[+] EMBL BM586598             [      ccgCTTTTAGTGAATTTGCATTTCTACGGCAAGCAACGAAACAATCTCAACTAGTAAGCTTTTAGTATAACTTTCAGAACTACCTCATCACTGCCCACATGATGTTCGCCCTCCGAATTGCCTCCCGAATGGGCCAGCGCGTCCGATCGCGCTCCATCGCCAGCCTGTCGGCACTTCCGGATACGCACCAGATGCTGCAGAAAACCTGCCGCGATTTTGCGGACAATGAGCTGGTGCCGAATGCGGCCCGGTTCGATCGGGAGCACCTTTACCCGGCCGAGCAGATCCGCAAGATGGGTGAGCTCGGGCTGATGGCAATCTCGGTGAAGGAAGAGTACGGCGGTACCGGTCTGGACTACGTCGCGTACGCCATCGCGATGGAGGAAATTTCGCGCGGATGCGCCTCGGCCGGTGTCATCATGTCGGTAAACAATTCACTGTACCTGGGACCGCTGACGCATTTCGGCAACGAACAGCAACAGCAAAAATACGTCACCGAGTACACCGATGGGTCGCGGGTCGGTTGCTTTGCCCTGTCCGAGCCGGGCAACGGGTCGGATGCGGGTGCCGCCTCCACGACGGCCACGCTCAAGGGCGACCACTGGGTGCGGAAC                      ]


>consensus_9073#4 CCGTTCATACTTTTAGTGAATTTGCATTTCTACGGCAAGCAACGAAACAATCTCAACTAG TAAGCTTTTAGTATAACTTTCAGAACTACCTCATCACTGCCCACATGATGTTCGCCCTCC GAATTGCCTCCCGAATGGGCCAGCGCGTCCGATCGCGCTCCATCGCCAGCCTGTCGGCAC TTCCGGATACGCACCAGATGCTGCAGAAAACCTGCCGCGATTTTGCGGACAATGAGCTGG TGCCGAATGCGGCCCGGTTCGATCGGGAGCACCTTTACCCGGCCGAGCAGATCCGCAAGA TGGGTGAGCTCGGGCTGATGGCAATCTCGGTGAAGGAAGAGTACGGCGGTACCGGTCTGG ACTACGTCGCGTACGCCATCGCGATGGAGGAAATTTCGCGCGGATGCGCCTCGGCCGGTG TCATCATGTCGGTAAACAATTCACTGTACCTGGGACCGCTGACGCATTTCGGCAACGAAC AGCAACAGCAAAAATACGTCACCGAGTACACCGATGGGTCGCGGGTCGGTTGCTTTGCCC TGTCCGAGCCGGGCAACGGGTCGGATGCGGGTGCCGCCTCCACGACGGNCACGCTCAAGG GCGACCACTGGGTGCTGAACGGTACGAAGTGTTGGATCACGA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9073#1      ---------------------------CCGCCCACGCGTCCGAAAAACAATCTCAACTAG 33
consensus_9073#3      ------------------------------------------------------------
consensus_9073#2      ----AATCGCCCCGAGGTAATTTGCATTTCTACGGCAAGCAACGAAACAATCTCAACTAG 56
consensus_9073#4      CCGTTCATACTTTTAGTGAATTTGCATTTCTACGGCAAGCAACGAAACAATCTCAACTAG 60
consensus_9073#0      ---------------------------------CCGAGGTTAACGAAAAATCTCA-CTAG 26
                                                                                  

consensus_9073#1      TAAGCTTTTAGTATAACTTTCAGAACTACCTCATCACTGCCCACATGATGTTCGCCCTCC 93
consensus_9073#3      ---------AGATNGCCGAGGNNAACTAC-TCATCACTGCCCACATGATGTTCGCCCTCC 50
consensus_9073#2      TAAGCTTTTAGTATAACTTTCAGAACTACCTCATCACTGCCCACATGATGTTCGCCCTCC 116
consensus_9073#4      TAAGCTTTTAGTATAACTTTCAGAACTACCTCATCACTGCCCACATGATGTTCGCCCTCC 120
consensus_9073#0      TCAAGCTTTAGTATAACTTTCAGAACTACCTCATCACTGCCCACATGATGTTCGCCCTCC 86
                               **     *      ****** ******************************

consensus_9073#1      GAATTGCCTCCCGAATGGGCCAGCGCGTCCGATCGCGCTCCAT-CGCCAGCCTGTCGGCA 152
consensus_9073#3      GAATTGCCTCCCGAATGGGCCAGCGCGTC-GATCGCGCTCCAT-CGCCAGCCTGTCGGCA 108
consensus_9073#2      GAATTGCCTCCCGAATGGGCCAGCGCGTCCGATCGCGCTCCATACGCCAGCCTGTCGGCA 176
consensus_9073#4      GAATTGCCTCCCGAATGGGCCAGCGCGTCCGATCGCGCTCCAT-CGCCAGCCTGTCGGCA 179
consensus_9073#0      GAATTGCCTCCCGAATGGGCCAGCGCGTACGATCGCGCTCCAT-CGCCAGCCTGTCGGCA 145
                      ****************************  ************* ****************

consensus_9073#1      CTTCCGGATACGCACCAGATGCTGCAGAAAACCTGCCGCGATTTTGCGGACAATGAGCTG 212
consensus_9073#3      CTTCCGGATACGCACCAGATGCTGCAGAAAACCTGCCGCGATTTTGCGGACAATGAGCTG 168
consensus_9073#2      CTTCCGGATACGCACCAGATGCTGCAGAAAACCTGCCGCGATTTTGCGGACAATGAGCTG 236
consensus_9073#4      CTTCCGGATACGCACCAGATGCTGCAGAAAACCTGCCGCGATTTTGCGGACAATGAGCTG 239
consensus_9073#0      CTTCCGGATACGCACCAGATGCTGCAGAAAACCTGCCGCGATTTTGCGGACAATGAGCTG 205
                      ************************************************************

consensus_9073#1      GTGCCGAATGCGGCCCGGTTCGATCGGGAGCACCTTTACCCGGCCGAGCAGATCC-GCAA 271
consensus_9073#3      GTGCCGAATGCGGCCCGGTTCGATCGGGAGCACCTTTACCCGGCCGAGCAGATCC-GCAA 227
consensus_9073#2      GTGCCGAATGCGGCCCGGTTCGATCGGGAGCACCTTTACCCGGCCGAGCAGATCC-GCAA 295
consensus_9073#4      GTGCCGAATGCGGCCCGGTTCGATCGGGAGCACCTTTACCCGGCCGAGCAGATCC-GCAA 298
consensus_9073#0      GTGCCGAATGCGGCC-GGTTCGATCGGGAGCACCTTTACCCGGCCGAGCAGATCCTGTAA 264
                      *************** *************************************** * **

consensus_9073#1      GATGGGTGAGCTCGGGCTGATGGCAATCTCGGTGAAGGAAGAGTACGGCGGTACC-GGTC 330
consensus_9073#3      GATGGGTGAGCTCGGGCTGATGGCAATCTCGGTGAAGGAAGAGTACGGCGGTACC-GGTC 286
consensus_9073#2      GATGGGTGAGCTCGGGCTGATGGCAATCTCGGTGAAGGAAGAGTACGGCGGTACC-GGTC 354
consensus_9073#4      GATGGGTGAGCTCGGGCTGATGGCAATCTCGGTGAAGGAAGAGTACGGCGGTACC-GGTC 357
consensus_9073#0      GATGGGTGAGCTCGGGCTGATGGCAATCTCGGTGAAGGAAGAGTACGGCGGTACCTGGTC 324
                      ******************************************************* ****

consensus_9073#1      TGGACTACGTCGCGTACGCCATCGCGATGGAGGAA--ATTTCGCGCGGATGCGCCTCGGC 388
consensus_9073#3      TGGACTACGTCGCGTACGCCATCGCGATGGAGGAA--ATTTCGCGCGGATGCGCCTCGGC 344
consensus_9073#2      TGGACTACGTCGCGTACGCCATCGCGATGGAGGAA--ATTTCGCGCGGATGCGCCTCGGC 412
consensus_9073#4      TGGACTACGTCGCGTACGCCATCGCGATGGAGGAA--ATTTCGCGCGGATGCGCCTCGGC 415
consensus_9073#0      TGGACTACGTCGCGTACGCCATCGCGATGGACGGACAATTTCGCGCGGATGCGCCTCGGC 384
                      ******************************* * *  ***********************

consensus_9073#1      CGGTGTCATCATGTCGGTAAAC-AATTCACTGTACCTGGGACCGCTGACGCATTTCGGCA 447
consensus_9073#3      CGGTGTCATCATGTCGGTAAAC-AATTCACTGTACCTGGGACCGCTGACGCATTTCGGCA 403
consensus_9073#2      CGGTGTCATCATGTCGGTAAAC-AATTCACTGTACCTGGGACCGCTGACGCATTTCGGCA 471
consensus_9073#4      CGGTGTCATCATGTCGGTAAAC-AATTCACTGTACCTGGGACCGCTGACGCATTTCGGCA 474
consensus_9073#0      CGGTGTCATCATGTCGGTAAACCAATTCACTGTACCTGGGACCGCTGACGCATTTCGGCA 444
                      ********************** *************************************

consensus_9073#1      ACGAACAGCAACAGCAAAAATACGTCACCGAGTACACCGATGGGT-CGCGGGTCGGTTGC 506
consensus_9073#3      ACGAACAGCAACAGCAAAAATACGTCACCGAGTACACCGATGGGT-CGCGGGTCGGTTGC 462
consensus_9073#2      ACGAACAGCAACAGCAAAAATACGTCACCGAGTACACCGATGGGT-CGCGGGTCGGTTGC 530
consensus_9073#4      ACGAACAGCAACAGCAAAAATACGTCACCGAGTACACCGATGGGT-CGCGGGTCGGTTGC 533
consensus_9073#0      ACGAACAGCAACAGCAAAAATACGTCACCGAGTACACCGATGGGTACGCGGTACGGATGC 504
                      ********************************************* *****  *** ***

consensus_9073#1      TTTGCCCTGTCCGAG-CCGGGCAACGGGTCGGATGCGGGT-GCCGCCTCCACGACGGCCA 564
consensus_9073#3      TTTGCCCTGTCCGAG-CCGGGCAACGGGTCGGATGCGGGT-GCCGCCTCCACGACGGCCA 520
consensus_9073#2      CTTGCCCTGTCCGAGACCGGGCAACGGGTCGGATGCGGGT-GCCGCTCCACGAACGGACA 589
consensus_9073#4      TTTGCCCTGTCCGAG-CCGGGCAACGGGTCGGATGCGGGT-GCCGCCTCCACGACGGNCA 591
consensus_9073#0      TTTGGCCTGTCCGAG-CCGGGCACCGGTCGGATTGCGGGTTGCCGCCTCCACGGA----A 559
                       *** ********** ******* ***   *  ******* *****  *          *

consensus_9073#1      CGCTCAAGGGCGACCACTGGG-TGCTGAACGG--TACGAAG-TGTTGGA--TCACGAA-- 616
consensus_9073#3      CGCTCAAGGGCGACCACTGGG-TGCTGAACGG--TACGAAG-TGTTGGA--TCACGAA-- 572
consensus_9073#2      CGCTCAAGGGCGACCACTGGGGTGCTGAACGGGTCACNAAGATGTTGGCACTCACGAAGA 649
consensus_9073#4      CGCTCAAGGGCGACCACTGGG-TGCTGAACGG--TACGAAG-TGTTGGA--TCACGA--- 642
consensus_9073#0      CGGGCCACGCTTCCCAAGGGA--GCGAAACN-----CAAAN--GCNGGG---AGCGTGGC 607
                      **  * * *    ***  **   **  ***      * **   *  **      **    

consensus_9073#1      CGGGTACGAGG-CCGGTGCGGCCGTCGTGTTTGCCACCACGGAC--AAATC-GCTCAAGC 672
consensus_9073#3      CGGGTACGAGG-CCGGTGCGGCCGTCGTGTTTGCCACCACGGAC--AAATC-GCTCAAGC 628
consensus_9073#2      CGGGTACGANGGCCGGNGNGGACGACGAGTATGGCACCAAGGAACAAAATCAGCNCAANC 709
consensus_9073#4      ------------------------------------------------------------
consensus_9073#0      TGAAACCAGGGTCAACCGCAAACGATTGGNCGGGAAATACAACCGCAAACC-GCGGNGCN 666
                                                                                  

consensus_9073#1      ----ACAAGGGCATTTCC-GCGTTCA--TCGTGCC--GAANGAGAC-GCCCGGCTTTT-C 721
consensus_9073#3      ----ACAAGGGCATTTCC-GCGTTCA--TCGTGCC--GAAGGAGAC-GCCCGGCTTTT-C 677
consensus_9073#2      CACCACAGGGCCATTNCCCGCGGTCCACCCGCGNCCGAAAGGAGACCGCCCGGTATCAGC 769
consensus_9073#4      ------------------------------------------------------------
consensus_9073#0      N---ACCGAAGCGGCCCC-GCGCTAGCACGGCGCCC-GCACNGCATAGCACA-CGGCNCA 720
                                                                                  

consensus_9073#1      GCTCGGCAAGAAGGANGACAAGCTGGGCATCCGGGGCTCCTCCACCTGCTCGCTCATCTT 781
consensus_9073#3      GCTCGGCAAGAAGGANGACAAGCTGGGCATCCGGGGCTCCTCCACCTGCTCGCTCATCTT 737
consensus_9073#2      GCCCGGCCACAACGCGNGG----------------------------------------- 788
consensus_9073#4      ------------------------------------------------------------
consensus_9073#0      ACACCAC-GGGACGCAAACACACCCGACATCNNAAGCACCACAACGGGCCCATTCATCCC 779
                                                                                  

consensus_9073#1      CGANGACTGT-------------------- 791
consensus_9073#3      CGAGGACTGTGCGATCCCGANGGAGAATCT 767
consensus_9073#2      ------------------------------
consensus_9073#4      ------------------------------
consensus_9073#0      CGCGCATCA--CAAACCCGAT--------- 798
                                                    




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)