|
These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9079#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1835 fasta sequence
[CCGCCCACGCGTCCGGCAAAAGTAAAAATCTCACCAATTCCATCAACAACGATTATCGCTTGTGCTGCGAACAGTTTTCCTTCGGTCGAGACATTCCAGCACTCGCCCCAGAAGGATGCTCATGAAATGGGCACTATCGTCAACCGTGCAGCACTATTATCTTAATCGTTATCTGACAACTTTACACATAAACATTAAAACTCTAAATAAACGCACAGTTTACACAAGAGAGATGTACACGAACAAAACACGATACAAGCAAGAAAAGAAAAAAACAATACACATACGATACAGTATTAAAATGAAATACACACATTTAATGCTAGGATAGGCTGAAGAAATCACACGATATGATGCTGCAAGCATTAACATAATAACTTCGTAAACATACATCAAAACACACACACACGCACACGGTAACAATTACTGTTTAGCATGTAAGCATTAACAAACTGTGTAGAATACACAGACACACATTAGATCTGTATGGTATATATTTGCAATTACGTTAACCGTGGGACGTTTGTGTAGAATGGAAACACAAACAGAGAAAAGATGATTAGAGAACAGAATATATATATACAAATATATAATCTAATTTTGTATTTATATCTTAATAATATTTAAACTATATACATATACACATTGCAAACTCACCTTATATACAAAAGGTTCTGGCTAGAAGTCTAAACAGAGTGTGAAGGTGAGGGTCAGTGGAAAACGCGTAACGAGATCATCAAATCGGAAGAGTGTGTATGTACATCTTCTCAGTACTTCGGTTCTTTTACATAAATATGACAATATGATTACATAGTTACAATATACGATGGATGAATGGCAAAACAGAAGCAGCTTTACGAACCCTTTAGTCACAAGATTATGAAGGCTCTTTTAAACGATTCTCGGTAGAAGTTGAGTGAAGGACGGATTGGAAAAGCAGGACACAGCTTAAAAGTATGACGCCTATATATTGCATACCACCTTGCTTTTAGATTTTAAACCATTCATTCGGTTGGG-AATTCCACCAGTTCCTCTACTGCTTCACTAAATGGTGCGGCGGTAGAGTTAGTTCTTCTGAGGATAGGCATATCCTCCGTACCTTACTTACTT-ACATACCAAACCAAACNAGAGCAACGGGTTTTTGCGATGGTGCATGCTTCTTGTGTGTCGAGAAAGCGAGAAACAAGAGAACACCAAAACGGCAGCTAATGTAAAACCCCATTTTATAACTTTTATCGTCTTTCACACGTGGAACATACACAGTTTGGAACTTGATTTCGTCTACTATTGTAAGTACATTAAAGAAAAGAAAACCACACAAATACAAACCTATTTGCTCGAACATTTCCCGCATAAGAACGCAATGGTATATTTCTTTACATTTCGAGACCGAGACTCGGTAGAGAAGAAAAAAGATCGATGTTATATTTACACACTCACACACACCCAGTACACTTGGTAGTACACTTTCGTTCGGAAGGATGTTTGTTGCTCTCCAAACACAACAGTTTACAACACATCATAATAGAGCTCAAGTAGCAATAGCCGCTATACACATATAGAGACAGAGAGCAAAATTCAAACTTTAATGAAACATCACCAATAAAGAGAGCCACACCACCCAGGTAGAATTAATCCAGAATGTGCAGTACTTACTCGTTTTGGAGCTAACAGTTTTATCTCGTTTTATCTCCAACAACATCTGACCGTTGAATCGCAAACACAATGTGAAAAATATTGGCATGAAAAATCCCCAACCGCTAATGCATGGTAAAAGTGACGAACCCCGCGAAAGGGACAGCAGGAGAAAAGAGAATTCACAAGAATACAAAAAA]
[+] EMBL BM581246 [CCGCCCACGCGTCCGGCAAAAGTAAAAATCTCACCAATTCCATCAACAACGATTATCGCTTGTGCTGCGAACAGTTTTCCTTCGGTCGAGACATTCCAGCACTCGCCCCAGAAGGATGCTCATGAAATGGGCACTATCGTCAACCGTGCAGCACTATTATCTTAATCGTTATCTGACAACTTTACACATAAACATTAAAACTCTAAATAAACGCACAGTTTACACAAGAGAGATGTACACGAACAAAACACGATACAAGCAAGAAAAGAAAAAAACAATACACATACGATACAGTATTAAAATGAAATACACACATTTAATGCTAGGATAGGCTGAAGAAATCACACGATATGATGCTGCAAGCATTAACATAATAACTTCGTAAACATACATCAAAACACACACACACGCACACGGTAACAATTACTGTTTAGCATGTAAGCATTAACAAACTGTGTAGAATACACAGACACACATTAGATCTGTATGGTATATATTTGCAATTACGTTAACCGTGGGACGTTTGTGTAGAATGGAAACACAAACAGAGAAAAGATGATTAGAGAACAGAATATATATATACAAATATATAATCTAATTTTGTATTTATATCTTAATAATATTTAAACTATATACATATACACATTGCA ]
[+] EMBL BM635900 [ ccgTGCAAGCATTAACATAATAACTTCGTAAACATACATCAAAACACACACACACGCACACGGTAACAATTACTGTTTAGCATGTAAGCATTAACAAACTGTGTAGAATACACAGACACACATTAGATCTGTATGGTATATATTTGCAATTACGTTAACCGTGGGACGTTTGTGTAGAATGGAAACACAAACAGAGAAAAGATGATTAGAGAACAGAATATATATATACAAATATATAATCTAATTTTGTATTTATATCTTAATAATATTTAAACTATATACATATACACATTGCAAACTCACCTTATATACAAAAGGTTCTGGCTAGAAGTCTAAACAGAGTGTGAAGGTGAGGGTCAGTGGAAAACGCGTAACGAGATCATCAAATCGGAAGAGTGTGTATGTACATCTTCTCAGTACTTCGGTTCTTTTACATAAATATGACAATATGATTACATAGTTACAATATACGATGGATGAATGGCAAAACAGAAGCAGCTTTACGAACCCTTTAGTCACAAGATTATGAAGGCTCTTTTAAACGATTCTCGGTAGAAGTTGAGTGAAGGACGGATTGGAAAAGCAGGACACAGCTTAAAAGTATGACGCCTATATATTGCATACCACCTTGCTTTTAGATTTTAAACCATTCATTCGGTTGGGCAATTCCACCAGTTCCTCTACTGCTTCACTAAATGGTGCGGCGGTAGAG ]
[+] EMBL BX623462 [ TATTTGCAATTACGTTAACCGTGGGACGTTTGTGTAGAATGGAAACACAAACAGAGAAAAGATGATTAGAGAACAGAATATATATATACAAATATATAATCTAATTTTGTATTTATATCTTAATAATATTTAAACTATATACATATACACATTGCAAACTCACCTTATATACAAAAGGTTCTGGCTAGAAGTCTAAACAGAGTGTGAAGGTGAGGGTCAGTGGAAAACGCGTAACGAGATCATCAAATCGGAAGAGTGTGTATGTACATCTTCTCAGTACTTCGGTTCTTTTACATAAATATGACAATATGATTACATAGTTACAATATACGATGGATGAATGGCAAAACAGAAGCAGCTTTACGAACCCTTTAGTCACAAGATTATGAAGGCTCTTTTAAACGATTCTCGGTAGAAGTTGAGTGAAGGACGGATTGGAAAAGCAGGACACAGCTTAAAAGTATGACGCCTATATATTGCATACCACCTTGCTTTTAGATTTTAAACCATTCATTCGGTTGGG AATTCCACCAGTTCCTCTACTGCTTCACTAAATGGTGCGGCGGTAGAGTTAGTTCTTCTGAGGATAGGCATATCCTCCGTACCTTACTTACTT ACATACCAAACCAAACNAGAGCAACGGGTTTTTGCGAT ]
[+] EMBL BM591539 [ ccgAATTTTGTATTTATATCTTAATAATATTTAAACTATATACATATACACATTGCAAACTCACCTTATATACAAAAGGTTCTGGCTAGAAGTCTAAACAGAGTGTGAAGGTGAGGGTCAGTGGAAAACGCGTAACGAGATCATCAAATCGGAAGAGTGTGTATGTACATCTTCTCAGTACTTCGGTTCTTTTACATAAATATGACAATATGATTACATAGTTACAATATACGATGGATGAATGGCAAAACAGAAGCAGCTTTACGAACCCTTTAGTCACAAGATTATGAAGGCTCTTTTAAACGATTCTCGGTAGAAGTTGAGTGAAGGACGGATTGGAAAAGCAGGACACAGCTTAAAAGTATGACGCCTATATATTGCATACCACCTTGCTTTTAGATTTTAAACCATTCATTCGGTTGGG AATTCCACCAGTTCCTCTACTGCTTCACTAAATGGTGCGGCGGTAGAGTTAGTTCTTCTGAGGATAGGCATATCCTCCGTACCTTACTTACTTAACATACCAAACCAAACAAGAGCAACGGTTTTTTGCGATGGTGCATGCTTCTTGTGTGTCGAGAAAGCGAGAAACAAGAGAACACCAAAACGGCAGCTAATGTAAAAC ]
[+] EMBL BX617777 [ CATGCTTCTTGTGTGTCGAGAAAGCGAGAAACAAGAGAACAACAAAACGGCAGCTAATGTAAAACCCCATTTTATAACTTTTATCGTCTTTCACACGTGGAACATACACAGTTTGGAACTTGATTTCGTCTACTATTGTAAGTACATTAAAGAAAAGAAAACCACACAAATACAAACCTATTTGCTCGAACATTTCCCGCATAAGAACGCAATGGTATATTTCTTTACATTTCGAGACCGAGACTCGGTAGAGAAGAAAAAAGATCGATGTTATATTTACACACTCACACACACCCAGTACACTTGGTAGTACACTTTCGTTCGGAAGGATGTTTGTTGCTCTCCAAACACAACAGTTTACAACACATCATAATAGAGCTCAAGTAGCAATAGCCGCTATACACATATAGAGACAGAGAGCAAAATTCAAACTTTAATGAAACATCACCAATAAAGAGAGCCACACCACCCAGGTAGAATTAATCCAGAATGTGCAGTACTTACTCGTTTTGGAGCTAACAGTTTTATCTCGTTTTATCTCCAACAACATCTGACCGTTGAATCGCAAACACAATGTGAAAAATATTGGCATGAAAAATCCCCAACCGCTAATGCATGGTAAAAGTGACGAACCCCGCGAAAGGGACAGCAGGAGAAAAGAGAATTCACAAGAATACAAAAAA]
consensusID : consensus_9079#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1615 fasta sequence
[CCGCCCACGCGTCCGCGATACAGTATTAAAATGAAATACACACATTTAATGCTAGGATAGGCTGAAGAAATCACACGATATGATGCTGCAAGCATTAACATAATAACTTCGTAAACATACATCAAAACACACACACACGCACACGGTAACAATTACTGTTTAGCATGTAAGCATTAACAAACTGTGTAGAATACACAGACACACATTAGATCTGTATGGTATATATTTGCAATTACGTTAACCGTGGGACGTTTGTGTAGAATGGAAACACAAACAGAGAAAAGATGATTAGAGAACAGAATATATATATACAAATATATAATCTAATTTTGTATTTATATCTTAATAATATTTAAACTATATACATATACACATTGCAAACTCACCTTATATACAAAAGGTTCTGGCTAGAAGTCTAAACAGAGTGTGAAGGTGAGGGTCAGTGGAAAACGCGTAACGAGATCATCAAATCGGAAGAGTGTGTATGTACATCTTCTCAGTACTTCGGTTCTTTTACATAAATATGACAATATGATTACATAGTTACAATATACGATGGATGAATGGCAAAACAGAAGCAGCTTGAATGGCAGCTTTACGAACCTTTTAGTCACAAGATTATGAAGGCTCTTTTAAACGATTCTCGGTAGAAGTTGAGTGAAGGACGGATTGGAAAAGCAGGACACAGCTTAAAAGTATGACGCCTATATATTGCATACCACCTTGCTTTTAGATTTTAAACCATTCATTCGGTTGGGAATTCCACCAGTTCCTCTACTGCTTCACATCACTAAATGGTGGTGGGCGGTAGAGTTAGTTCTTCTGAGGATAAGCATATTCTCTGTACCTTACTTAATTAACATACCAAACCAAACAAGAGCAACGGTTTTTTGCGATGGTGCATGCTTCTTGTGTGTCGAGAAAGCGAGAAACAAGAGAACAACAAAACGGCAGCTAATGTAAAACCCCATTTTATAACTTTTATCGTCTTTCACACGTGGAACATACACAGTTTGGAACTTGATTTCGTCTACTATTGTAAGTACATTAAAGAAAAGGAAACCACACAAATACAAACCTATTTGCTCGAACATTTCCCACATAAGAACGCAATGGTATATTT-CTTTACATTTCGAGACCGAGACTCGGTAGAGAAGAAAACAGATCGATGTTATATTTACGCACTCACACACCCCAGTTACGCACTCACACACCCACACAACAGTTTACAACACATCATAATAGAGCTCAAATAGCAATAGCCGCTATACACATTAAGAGACAGAGAGCAAAATTCAAACTTTAATGAAACATCACCAATAAAGAGAGCCACACCACCCAGGTAGAATTAATCCAGAATGTGCAGTACTTACTCGTTTTGGAGCTAACAGTTTTATCTCGTTTTATCTCCAACAACATCTGACCGTTGAATCGCAAACACAATATGAAAAATATTGGCATGAAAAATCCCCAACCGCTAATGCATGGTAAAAGTGACGAACCCCGCGAAAGAGACAGCAGGAGAAAAGAGAATTCGCAAGAATACAGAAAAAATGACTTGAAAATTTAAAAAAAAAAACTAAATAGAAATATATCATAAACCTTCTGTGTCGTA]
[+] EMBL BM649592 [CCGCCCACGCGTCCGCGATACAGTATTAAAATGAAATACACACATTTAATGCTAGGATAGGCTGAAGAAATCACACGATATGATGCTGCAAGCATTAACATAATAACTTCGTAAACATACATCAAAACACACACACACGCACACGGTAACAATTACTGTTTAGCATGTAAGCATTAACAAACTGTGTAGAATACACAGACACACATTAGATCTGTATGGTATATATTTGCAATTACGTTAACCGTGGGACGTTTGTGTAGAATGGAAACACAAACAGAGAAAAGATGATTAGAGAACAGAATATATATATACAAATATATAATCTAATTTTGTATTTATATCTTAATAATATTTAAACTATATACATATACACATTGCAAACTCACCTTATATACAAAAGGTTCTGGCTAGAAGTCTAAACAGAGTGTGAAGGTGAGGGTCAGTGGAAAACGCGTAACGAGATCATCAAATCGGAAGAGTGTGTATGTACATCTTCTCAGTACTTCGGTTCTTTTACATAAATATGACAATATGATTACATAGTTACAATATACGATGGATGAATGGCAAAACAGAAGCAGCTT ]
[+] EMBL BX625430 [ AGGGTCAGTGGAAAACGCGTAACGAGATCATCAAATCGGAAGAGTGTGTATGTACATCTTCTCAGCACTTCGGTTCTTTTACATAAATATGACAATATGATTACATAGTTACAATATACGATGGATGAATGGCAAGACAGACGATGGATGAATGGCAGCTTTACGAACCTTTTAGTCACAAGATTATGAAGGCTCTTTTAAACGATTCTCGGTAGAAGTTGAGTGAAGGACGGATTGGAAAAGCAGGACACAGCTTAAAAGTATGACGCCTATATATTGCATACCACCTTGCTTTTAGATTTTAAACCATTCATTCGGTTGGGAATTCCACCAGTTCCTCTACTGCTTCACATCACTAAATGGTGGTGGGCGGTAGAGTTAGTTCTTCTGAGGATAAGCATATTCTCTGTACCTTACTTAATTAACATACCAAACCAAACAAGAGCAACGGTTTTTTGCGATGGTGCATGCTTCTTGTGTGTCGAGAAAGCGAGAAACAAGAGAACAACAAAACGGCAGCTAATGTAAAACCCCATTTTATAACTTTTATCGTCTTTCACACGTGGAACATACACAGTTTGGAACTTGATTTCGTCTACTATTGTAAGTACATTAAAGAAAAGGAAACCACACAAATACAAACCTATTTGCTCGAACATTTCCCACATAAGAACGCAATGGTATATTTCCTTTACATTTCGAGACCGAGACTCGGTAGAGAAGAAAACAGATCGATGTTATATTTACGCACT ]
[+] EMBL BX609213 [ AAACGGCAGCTAATGTAAAACCCCATTTTATAACTTTTATCGTCTTTCACACGTGGAACATACACAGTTTGGAACTTGATTTCGTCTACTATTGTAAGTACATTAAAGAAAAGGAAACCACACAAATACAAACCTATTTGCTCGAACATTTCCCACATAAGAACGCAATGGTATATTT CTTTACATTTCGAGACCGAGACTCGGTAGAGAAGAAAACAGATCGATGTTATATTTACGCACTCACACACCCCAGTTACGCACTCACACACCCACACAACAGTTTACAACACATCATAATAGAGCTCAAATAGCAATAGCCGCTATACACATTAAGAGACAGAGAGCAAAATTCAAACTTTAATGAAACATCACCAATAAAGAGAGCCACACCACCCAGGTAGAATTAATCCAGAATGTGCAGTACTTACTCGTTTTGGAGCTAACAGTTTTATCTCGTTTTATCTCCAACAACATCTGACCGTTGAATCGCAAACACAATATGAAAAATATTGGCATGAAAAATCCCCAACCGCTAATGCATGGTAAAAGTGACGAACCCCGCGAAAGAGACAGCAGGAGAAAAGAGAATTCGCAAGAATACAGAAAAAATGACTTGAAAATTTAAAAAAAAAAACTAAATAGAAATATATCATAAACCTTCTGTGTCGTA]
[+] EMBL BX611448 [ GTGGAACATACACAGTTTGGAACTTGATTTCGTCTACTATTGTAAGTACATTAAAGAAAAGGAAACCACACAAATACAAACCTATTTGCTCGAACATTTCCCACATAAGAACGCAATGGTATATTT CTTTACATTTCGATACCGAGACTCGGTAGAGAAGAAAACAGATCGATGTTATATTTACGCACTCACACACCCCAGTTACGCACTCACACACCCACACAACAGTTTACAACACATCATAATAGAGCTCAAATAGCAATAGCCGCTATACACATTAAGAGACAGAGAGCAAAATTCAAACTTTAATGAAACATCACCAATAAAGAGAGCCACACCACCCAGGTAGAATTAATCCAGAATGTGCAG ]
consensusID : consensus_9079#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 835 fasta sequence
[ATCAAGTAGAGGATAGATTTGCTTGATGAGAGAAGCAACAAAAACAACAGATCATAAACAGAGCAATGATTTTTCTTTACCTTTGAAGCAGGGAAACGCTCAAGATCCTGTTTTTTCTGTTTCGGGACCACCATACCATCAAAAGGACCGGGTCCTAAAGGGCAAAGAAAGTCATCCAAAACTGAAAACAGAGAAAGAGAAACAAGAATATCGACTAGAAATTTGACTATAACTTCTTCGAAAACCGATACCTTTAACATCGATAGGTATGGTGTCCGTTTCTGCAAAAAAACAAAAACAGCAGACGGATTCATGCTGATATAACAGCAACACACACACATAAGAAATAATGAATTCAGATGACGATTAACTTCGTTGCGCACACGATCCATGATGCGGTTGACTGTAGTACCTATTTCATCGGTCTTACCAGCTCTCGACCGGGTGTCCTGATGCGAGTGTTAGGAATTTCCCTTTCAAAACCATCGAACGATCGGAGGAAGATTGGGTGGCAAAAGTAAAAATCTCACCAATTCCATCAACAACGATTGTCGCTTGTGCTGCGAACAGTTTTCCTTCGGTCGAGACGTTCCAGCACTCGTCCCAGAAGGATGCTCATGAAATGGGCACCATCGTCAACCGTGCAGCACTATTATCGTAATCGTTATCTGATAACTTTACACATAAACATTAAAACTCTAAATAAACGCACAGTTTACACAAGAGAGATGTACACGAACAAAACACGATACAAGCAAGAAAAGAAAAAAACAATACACATACGATACAGTATTAAAATGAAATACACACATTTAATGCTAGGATAGGCTGAAGA]
[+] EMBL BX615600 [ATCAAGTAGAGGATAGATTTGCTTGATGAGAGAAGCAACAAAAACAACAGATCATAAACAGAGCAATGATTTTTCTTTACCTTTGAAGCAGGGAAACGCTCAAGATCCTGTTTTTTCTGTTTCGGGACCACCATACCATCAAAAGGACCGGGTCCTAAAGGGCAAAGAAAGTCATCCAAAACTGAAAACAGAGAAAGAGAAACAAGAATATCGACTAGAAATTTGACTATAACTTCTTCGAAAACCGATACCTTTAACATCGATAGGTATGGTGTCCGTTTCTGC AATAAAC GAAATAGCAGACGGATTCATGCTGATATAACAGCAACACACACACATAAGAAATAATGAATTCAGATGACGATTAACTTCGTTGCGCACACGATCCATGATGCGGTTG ]
[+] EMBL BX608306 [ CAAGAATATCGACTAGAAATTTGACTATAACTTCTTCGAAAACCGATACCTTTAACATCGATAGGTATGGTGTCCGTTTCTGCAAAAAAACAAAAACAGCAGACGGATTCATGCTGATATAACAGCAACACACACACATAAGAAATAATGAATTCAGATGACGATTAACTTCGTTGCGCACACGATCCATGATGCGGTTGACTGTAGTACCTATTTCATCGGTCTTACCAGCTCTCGACCGGGTGTCCTGATGCGAGTGTTAGGAATTTCCCTTTCAAAACCATCGAACGATCGGAGGAAGATTGGGTGGCAAAAGTAAAAATCTCACCAATTCCATCAACAACGATTGTCGCTTGTGCTGCGAACAGTTTTCCTTCGGTCGAGACGTTCCAGCACTCGTCCCAGAAGGATGCTCATGAAATGGGCACCATCGTCAACCGTGCAGCACTATTATCGTAATCGTTATCTGATAACTTTACACATAAACATTAAAACTCTAAATAAACGCACAGTTTACACAAGAGAGATGTACACGAACA ]
[+] EMBL BX621520 [ GACTAGAAATTTGACTATAACTTCTTCGAAAACCGATACCTTTAACATCGATAGGTATGGTGTCCGTTTCTGCAAAAAAACAAAAACAGCAGACGGATTCATGCTGATATAACAGCAACACACACACATAAGAAATAATGAATTCAGATGACGATTAACTTCGTTGCGCACACGATCCATGATGCGGTTGACTGTAGTACCTATTTCATCGGTCTTACCAGCTCTCGACCGGGTGTCCTGATGCGAGTGTTAGGAATTTCCCTTTCAAAACCATCGAACGATCGGAGGAAAATTGGGTGGCAAAAGTAAAAATCTCACCAATTCCATCAACAACGATTGTCGCTTGTGCTGCGAACAGTTTTCCTTCGGTCGAGACGTTCCAGCACTCGTCCCAGAAGGATGCTCATGAAATGGGCACCATCGTCAACCGTGCAGCACTATTATCGTAATCGTTATCTGATAACTTTACACATAAACATTAAAACTCTAAATAAACGCACAGTTTACACAAGAGAGATGTACACGAACAAAACACG ]
[+] EMBL BM631256 [ ccgGCGAGTGTTAGGAATTTCCCTTTCAAAACCATCGAACGATCGGAGGAAGATTGGGTGGCAAAAGTAAAAATCTCACCAATTCCATCAACAACGATTATCGCTTGTGCTGCGAACAGTTTTCCTTCGGTCGAGACATTCCAGCACTCGCCCCAGAAGGATGCTCATGAAATGGGCACTATCGTCAACCGTGCAGCACTATTATCTTAATCGTTATCTGACAACTTTACACATAAACATTAAAACTCTAAATAAACGCACAGTTTACACAAGAGAGATGTACACGAACAAAACACGATACAAGCAAGAAAAGAAAAAAACAATACACATACGATACAGTATTAAAATGAAATACACACATTTAATGCTAGGATAGGCTGAAGA]
consensusID : consensus_9079#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 144 fasta sequence
[GCGAGAAACAAGAGAACAACAAAACGGCAGCGAAGGTAAAACCCCACTGCATAACTGGGAGCGCCTAACACACGTGGAACATACACAGTTGGGAACGTGATACCGCCTACGATGGCAAGCACAGCAAAGAAAAGGAAACCACAC]
[+] EMBL BX609677 [GCGAGAAACAAGAGAACAACAAAACGGCAGCGAAGGTAAAACCCCACTGCATAACTGGGAGCGCCTAACACACGTGGAACATACACAGTTGGGAACGTGATACCGCCTACGATGGCAAGCACAGCAAAGAAAAGGAAACCACAC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9079#1 ------------------------------------------------------------
consensus_9079#3 ------------------------------------------------------------
consensus_9079#0 CCGCCCACGCGTCCGGCAAAAGTAAAAATCTCACCAATTCCATCAACAACGATTATCGCT 60
consensus_9079#2 ------------------------------------------------------------
consensus_9079#1 ------------------------------------------------------------
consensus_9079#3 ------------------------------------------------------------
consensus_9079#0 TGTGCTGCGAACAGTTTTCCTTCGGTCGAGACATTCCAGCACTCGCCCCAGAAGGATGCT 120
consensus_9079#2 ------------------------------------------------------------
consensus_9079#1 ------------------------------------------------------------
consensus_9079#3 ------------------------------------------------------------
consensus_9079#0 CATGAAATGGGCACTATCGTCAACCGTGCAGCACTATTATCTTAATCGTTATCTGACAAC 180
consensus_9079#2 ------------------------------------------------------------
consensus_9079#1 ------------------------------------------------------------
consensus_9079#3 ------------------------------------------------------------
consensus_9079#0 TTTACACATAAACATTAAAACTCTAAATAAACGCACAGTTTACACAAGAGAGATGTACAC 240
consensus_9079#2 ------------------------------------------------------------
consensus_9079#1 -------------------------------CCGCCCACGCGTCCGCGATACAGTATTAA 29
consensus_9079#3 ------------------------------------------------------------
consensus_9079#0 GAACAAAACACGATACAAGCAAGAAAAGAAAAAAACAATACACATACGATACAGTATTAA 300
consensus_9079#2 ------------------------------------------------------------
consensus_9079#1 AATGAAATACACACATTTAATGCTAGGATAGGCTGAAGAAATCACACGATATGATGCTGC 89
consensus_9079#3 ------------------------------------------------------------
consensus_9079#0 AATGAAATACACACATTTAATGCTAGGATAGGCTGAAGAAATCACACGATATGATGCTGC 360
consensus_9079#2 ------------------------------------------------------------
consensus_9079#1 AAGCATTAACATAATAACTTCGTAAACATACATCAAAACACACACACACGCACACGGTAA 149
consensus_9079#3 ------------------------------------------------------------
consensus_9079#0 AAGCATTAACATAATAACTTCGTAAACATACATCAAAACACACACACACGCACACGGTAA 420
consensus_9079#2 ------------------------------------------------------------
consensus_9079#1 CAATTACTGTTTAGCATGTAAGCATTAACAAACTGTGTAGAATACACAGACACACATTAG 209
consensus_9079#3 ------------------------------------------------------------
consensus_9079#0 CAATTACTGTTTAGCATGTAAGCATTAACAAACTGTGTAGAATACACAGACACACATTAG 480
consensus_9079#2 ------------------------------------------------------------
consensus_9079#1 ATCTGTATGGTATATATTTGCAATTACGTTAACCGTGGGACGTTTGTGTAGAATGGAAAC 269
consensus_9079#3 ------------------------------------------------------------
consensus_9079#0 ATCTGTATGGTATATATTTGCAATTACGTTAACCGTGGGACGTTTGTGTAGAATGGAAAC 540
consensus_9079#2 ----------------------------------------ATCAAGTAGAGGATAGATTT 20
consensus_9079#1 ACAAACAGAGAAAAGATGATTAGAGAACAGAATATATATATACAAATATATAATCTAATT 329
consensus_9079#3 ------------------------------------------------------------
consensus_9079#0 ACAAACAGAGAAAAGATGATTAGAGAACAGAATATATATATACAAATATATAATCTAATT 600
consensus_9079#2 GCTTGATGAGAGAAGCAACAAAAACAACAGATCATA----AACAGAGCAATGATTTTTCT 76
consensus_9079#1 TTGTATTTATATCTTAATAATATTTAAACTATATACATATACACATTGCAAACTCACCTT 389
consensus_9079#3 ------------------------------------------------------------
consensus_9079#0 TTGTATTTATATCTTAATAATATTTAAACTATATACATATACACATTGCAAACTCACCTT 660
consensus_9079#2 TTACCTTTGAAGCAGGGAAACGCTCAAG--ATCCTGTTTTTTCTGTTTCGGGACCACCAT 134
consensus_9079#1 ATATACAAAAGGTTCTGGCTAGAAGTCTAAACAGAGTGTGAAGGTGAGGGTCAGTGGAAA 449
consensus_9079#3 ------------------------------------------------------------
consensus_9079#0 ATATACAAAAGGTTCTGGCTAGAAGTCTAAACAGAGTGTGAAGGTGAGGGTCAGTGGAAA 720
consensus_9079#2 ACCATCAAAAGGACCGGGTCCTAAAGGGCAAAGAAAGTCATCCAAAACTGAAAACAGAGA 194
consensus_9079#1 ACGCGTAACGAGATCATCAAATCGGAAGAGTGTGTATGTACATCTTCTCAGTACTTCGGT 509
consensus_9079#3 ------------------------------------------------------------
consensus_9079#0 ACGCGTAACGAGATCATCAAATCGGAAGAGTGTGTATGTACATCTTCTCAGTACTTCGGT 780
consensus_9079#2 AAGAGAAACAAGAATATCGACTAGAAA-----TTTGACTATAACTTCTTCGAAAACCGAT 249
consensus_9079#1 TCTTTTACATAAATATGACAATATGATTACATAGTTACAATATACGATGGATGAATGGCA 569
consensus_9079#3 ------------------------------------------------------------
consensus_9079#0 TCTTTTACATAAATATGACAATATGATTACATAGTTACAATATACGATGGATGAATGGCA 840
consensus_9079#2 ACCTTTA-----------------ACATCGATAGGTATGGTGTCCGTT---TCTGCAAAA 289
consensus_9079#1 AAACAGAAGCAGCTTGAATGGCAGCTTTACGAACCTTTTAGTCACAAGATTATGAAGGCT 629
consensus_9079#3 ------------------------------------------------------------
consensus_9079#0 AAACAGAAGCA------------GCTTTACGAACCCTTTAGTCACAAGATTATGAAGGCT 888
consensus_9079#2 AAACAAAAACA-----------------GCAGACGGATTCATGCTGATATAACAGCAACA 332
consensus_9079#1 CTTTTAAACGATTCTCGGTAGAAGTTGAGTGAAGGACGGATTGGAAAAGCAGGACACAGC 689
consensus_9079#3 ------------------------------------------------------------
consensus_9079#0 CTTTTAAACGATTCTCGGTAGAAGTTGAGTGAAGGACGGATTGGAAAAGCAGGACACAGC 948
consensus_9079#2 CACACACATAAGAAATAAT-GAATTCAGATGACGATTAACTTCGTTGCGCA---CACGAT 388
consensus_9079#1 TTAAAAGTATGACGCCTATATATTGCATACCACCTTGCTTTTAGATTTTAAACCATTCAT 749
consensus_9079#3 ------------------------------------------------------------
consensus_9079#0 TTAAAAGTATGACGCCTATATATTGCATACCACCTTGCTTTTAGATTTTAAACCATTCAT 1008
consensus_9079#2 CCATGATGCGGTTGACTGTAGTACCTATTTCATCGGTCTTACCAGCTCTCGACCGGGTGT 448
consensus_9079#1 TCGGTTGGGAATTCCACCAGTTCCTCTACTGCTTCACATCACTAAATGGTGGTGGGCGGT 809
consensus_9079#3 ------------------------------------------------------------
consensus_9079#0 TCGGTTGGGAATTCCACCAGTTCCTCTACTGCT-----TCACTAAATGGTGC--GGCGGT 1061
consensus_9079#2 CCTGATGCGAGTGTTAGGAATTTCCCTTTCAAA----ACCATCGAACGATCGGAGGAAGA 504
consensus_9079#1 AGAGTTAGTTCTTCTGAGGATAAGCATATTCTCTGTACCTTACTTAATTAACATACCAAA 869
consensus_9079#3 ------------------------------------------------------------
consensus_9079#0 AGAGTTAGTTCTTCTGAGGATAGGCATATCCTCCGTACCTTACTTACTTA-CATACCAAA 1120
consensus_9079#2 TTGGGTGGC------AAAAGTAAAAATCTCACCAATTCCATCAACAACGA--TTGTCGCT 556
consensus_9079#1 CCAAACAAGAGCAACGGTTTTTTGCGATGGTGCATGCTTCTTGTGTGTCGAGAAAGCGAG 929
consensus_9079#3 -------------------------------------------------------GCGAG 5
consensus_9079#0 CCAAACNAGAGCAACGGGTTTTTGCGATGGTGCATGCTTCTTGTGTGTCGAGAAAGCGAG 1180
consensus_9079#2 TGTGCTGCGAACAG-----TTTTCCTTCGGTCGAGACGTTCCAGCACTCGTCCCAGAAGG 611
* *
consensus_9079#1 AAACAAGAGAACAACAAAACGGCAGCTAATGTAAAACCCCATT-TTATAACTTTTATCGT 988
consensus_9079#3 AAACAAGAGAACAACAAAACGGCAGCGAAGGTAAAACCCCACT-GCATAACTGGGAGCGC 64
consensus_9079#0 AAACAAGAGAACACCAAAACGGCAGCTAATGTAAAACCCCATT-TTATAACTTTTATCGT 1239
consensus_9079#2 ATGCTCATGAAATGGGCACCATCGTCAACCGTGCAGCACTATTATCGTAATCGTTATCTG 671
* * *** * * * * * ** * * * * * *** * *
consensus_9079#1 CTTTC---ACACGTGGAACATACACAGTTTGGAACTTGATTTCGTCTACTATTGTAAGTA 1045
consensus_9079#3 CTAAC---ACACGTGGAACATACACAGTTGGGAACGTGATACCGCCTACGATGGCAAGCA 121
consensus_9079#0 CTTTC---ACACGTGGAACATACACAGTTTGGAACTTGATTTCGTCTACTATTGTAAGTA 1296
consensus_9079#2 ATAACTTTACACATA-AACATTAAAACTCTAAATAAACGCACAGTTTAC-ACAAGAGAGA 729
* * **** * ***** * * * * * *** * * *
consensus_9079#1 CATTAAAGAAAAGGAAACCACACAAATACAAACCTATTTGCTCGA-ACATTTCCCACATA 1104
consensus_9079#3 CAGCAAAGAAAAGGAAACCACAC------------------------------------- 144
consensus_9079#0 CATTAAAGAAAAGAAAACCACACAAATACAAACCTATTTGCTCGA-ACATTTCCCGCATA 1355
consensus_9079#2 TGTACACGAACAAAACACGATACAAGCAAGAAAAGAAAAAAACAATACACATACGATACA 789
* *** * * ** * **
consensus_9079#1 AGAACGCAATGGTATATTTCTTTACATTTCGAGACCGAGACTCGGTAGAGAAGAAAACAG 1164
consensus_9079#3 ------------------------------------------------------------
consensus_9079#0 AGAACGCAATGGTATATTTCTTTACATTTCGAGACCGAGACTCGGTAGAGAAGAAAAAAG 1415
consensus_9079#2 GTATTAAAATGAAATACACACATTTAATGCTAGGATAGGCTGAAGA-------------- 835
consensus_9079#1 ATCGATGTTATATTTACGCACTCACACACCCCAGTTACGCACTCACACACCC-------- 1216
consensus_9079#3 ------------------------------------------------------------
consensus_9079#0 ATCGATGTTATATTTACACACTCACACACACCCAGTACACTTGGTAGTACACTTTCGTTC 1475
consensus_9079#2 ------------------------------------------------------------
consensus_9079#1 ------------------------ACACAACAGTTTACAACACATCATAATAGAGCTCAA 1252
consensus_9079#3 ------------------------------------------------------------
consensus_9079#0 GGAAGGATGTTTGTTGCTCTCCAAACACAACAGTTTACAACACATCATAATAGAGCTCAA 1535
consensus_9079#2 ------------------------------------------------------------
consensus_9079#1 ATAGCAATAGCCGCTATACACATTAAGAGACAGAGAGCAAAATTCAAACTTTAATGAAAC 1312
consensus_9079#3 ------------------------------------------------------------
consensus_9079#0 GTAGCAATAGCCGCTATACACATATAGAGACAGAGAGCAAAATTCAAACTTTAATGAAAC 1595
consensus_9079#2 ------------------------------------------------------------
consensus_9079#1 ATCACCAATAAAGAGAGCCACACCACCCAGGTAGAATTAATCCAGAATGTGCAGTACTTA 1372
consensus_9079#3 ------------------------------------------------------------
consensus_9079#0 ATCACCAATAAAGAGAGCCACACCACCCAGGTAGAATTAATCCAGAATGTGCAGTACTTA 1655
consensus_9079#2 ------------------------------------------------------------
consensus_9079#1 CTCGTTTTGGAGCTAACAGTTTTATCTCGTTTTATCTCCAACAACATCTGACCGTTGAAT 1432
consensus_9079#3 ------------------------------------------------------------
consensus_9079#0 CTCGTTTTGGAGCTAACAGTTTTATCTCGTTTTATCTCCAACAACATCTGACCGTTGAAT 1715
consensus_9079#2 ------------------------------------------------------------
consensus_9079#1 CGCAAACACAATATGAAAAATATTGGCATGAAAAATCCCCAACCGCTAATGCATGGTAAA 1492
consensus_9079#3 ------------------------------------------------------------
consensus_9079#0 CGCAAACACAATGTGAAAAATATTGGCATGAAAAATCCCCAACCGCTAATGCATGGTAAA 1775
consensus_9079#2 ------------------------------------------------------------
consensus_9079#1 AGTGACGAACCCCGCGAAAGAGACAGCAGGAGAAAAGAGAATTCGCAAGAATACAGAAAA 1552
consensus_9079#3 ------------------------------------------------------------
consensus_9079#0 AGTGACGAACCCCGCGAAAGGGACAGCAGGAGAAAAGAGAATTCACAAGAATACAAAAAA 1835
consensus_9079#2 ------------------------------------------------------------
consensus_9079#1 AATGACTTGAAAATTTAAAAAAAAAAACTAAATAGAAATATATCATAAACCTTCTGTGTC 1612
consensus_9079#3 ------------------------------------------------------------
consensus_9079#0 ------------------------------------------------------------
consensus_9079#2 ------------------------------------------------------------
consensus_9079#1 GTA 1615
consensus_9079#3 ---
consensus_9079#0 ---
consensus_9079#2 ---
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||