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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9087#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 13 consensus length = 1164 fasta sequence
[CCCGGCGACCGTCAAGATGAAAGCAGTGGCCAAGTTCAGTCTCAGTTTCCTAGTGCTCGTCAGTGTGATCTTCGGACTCTCCACTGCCCAGACGCAGCTCCGAAGGCAGTATGAGCTAAACCGGCGAACACCGGGCAGTGGCCCCGCGGTACGCAACCGTGAGCCTGCCGCGTCCGACGCACCAGTCCGCAGCCCAGTGCGTCAGCAGGGCCCGGTACAGGCGTCCGCCTCGGACGAGATTGATCCGGAGCTGTCGGAGAACTGTCCCGAGCCGAACGGATACTTTGCAGATGCGGAGCAGTGCGATAAGTACTATCAGTGCCGCGATGGACAGATTACGGAGAAACTGTGCCCGGACGGTATGGTGTTCAACGATTACGACTCCGATCAGGAGAAGTGCGATCTGCCCTTCAACATTGACTGCAGCAAACGCCCAAAGCTCCAGACACCCATAGCGTCCCTGCACTGCCCCCGCCAGAACGGTTACTTTGCCAGCGAGACTGGTGCGTGCGATAAGTTCTACTACTGCGTGGACGGTATGTTCAACATGATCACCTGCCCGGAAGGGTTGGTGTTTAATCCACGCACCGGCATCTGCACCTGGCCGGACGAGGCCCAGAAGAAGGGCTGCTCGTCGGAGGACGTGTTCAAGTTTACCTGCCCGAAGGTG-AACGAAACCGAGGGAGCGACCCATCCACGCTATGCCGATCCGGACGACTGTCAGTTCTTCTACGTGTGCATCAACGGTGAAACACCGCGCCGCAACGGGTGCAAACTCGGACAGGC-GTTCGACGATGTGGCCAAGCACTGCGAGTGGGCCCGAAAGGTGCCAGATTGTGCCGACT-GGTA-TAAGGATCGTCTTACCGACAAGCAACTCGAGGAGCTGGAAAATCCACCGACACCCAAGCCGAAGCCTGCCAACAGGCCGTCGAAGGTTTCCCGCCGACGTCCGTCCAAGCGACCGAAGCAACCGGTTGATGATTCGGAACAGGCAGGCCCACATCCGTGTGACTCGTCCAGCTTTTAGTTTAGTCACATTGCATTGCCAACGGGCATGTTCTTTCTTGTTTGGGGAGGGCTAATAATTGTTAACTCCACCAAGCTGGAGTTGGATGAAGTAGAGCCAGGGGAAAAATACTCGCGTGTCTTTGTGTGTATGTATGT]
[+] EMBL BM622766 [CCGGGCGACCGTCAAGATGAAAGCAGTGGCCAAGTTCAGTCTCAGTTTCCTAGTGCTCGTCAGTGTGATCTTCGGACTCTCCACTGCCCAGACGCAGCTCCGAAGGCAGTATGAGCTAAACCGGCGAACACCGGGCAGTGGCCCCGCGGTACGCAACCGTGAGCCTGCCGCGTCCGACGCACCAGTCCGCAGCCCAGTGCGTCAGCAGGGCCCGGTACAGGCGTCCGCCTCGGACGAGATTGATCCGGAGCTGTCGGAGAACTGTCCCGAGCCGAACGGATACTTTGCAGATGCGGAGCAGTGCGATAAGTACTATCAGTGCCGCGATGGACAGATTACGGAGAAACTGTGCCCGGACGGTATGGTGTTCAACGATTACGACTCCGATCAGGAGAAGTGCGATCTGCCCTTCAACATTGACTGCAGCAAACGCCCAAAGCTCCAGACACCCATAGCGTCCCTGCACTGCCCCCGCCAGAACGGTTACTTTGCCAGCGAGACTGGTGCGTGCGATAAGTTCTACTACTGCGTGGACGGTA ]
[+] EMBL BM606100 [ CCGGCGACCGTCAAGATGAAAGCAGTGGCCAAGTTCAGTCTCAGTTTCCTAGTGCTCGTCAGTGTGATCTTCGGACTCTCCACTGCCCAGACGCAGCTCCGAAGGCAGTATGAGCTAAACCGGCGAACACCGGGCAGTGGCCCCGCGGTACGCAACCGTGAGCCTGCCGCGTCCGACGCACCAGTCCGCAGCCCAGTGCGTCAGCAGGGCCCGGTACAGGCGTCCGCCTCGGACGAGATTGATCCGGAGCTGTCGGAGAACTGTCCCGAGCCGAACGGATACTTTGCAGATGCGGAGCAGTGCGATAAGTACTATCAGTGCCGCGATGGACAGATTACGGAGAAACTGTGCCCGGACGGTATGGTGTTCAACGATTACGACTCCGATCAGGAGAAGTGCGATCTGCCCTTCAACATTGACTGCAGCAAACGCCCAAAGCTCCAGACACCCATAGCGTCCCTGCACTGCCCCCGCCAGAACGGTTACTTTGCCAGCGAGACTGGTGCGTGCGATAAGTTCTACTACTGCGTGGACGGTATGTTCAACATGATCACCTGCCCGGAAGGGTTGGTGTTTAATCCACGCACCGGCATCTGCACCTGGCCGGACGAGGCCCAGAAGAAGGGCTGCTCGTCGGAGGACGTGTTCAAGTTTACCTGGCCGAAGGTGAAACGAAACCGAGGGAGCta ]
[+] EMBL BM655081 [ ccGCGACCGTCAAGATGAAAGCAGTGGCCAAGTTCAGTCTCAGTTTCCTAGTGCTCGTCAGTGTGATCTTCGGACTCTCCACTGCCCAGACGCAGCTCCGAAGGCAGTATGAGCTAAACCGGCGAACACCGGGCAGTGGCCCCGCGGTACGCAACCGTGAGCCTGCCGCGTCCGACGCACCAGTCCGCAGCCCAGTGCGTCAGCAGGGCCCGGTACAGGCGTCCGCCTCGGACGAGATTGATCCGGAGCTGTCGGAGAACTGTCCCGAGCCGAACGGATACTTTGCAGATGCGGAGCAGTGCGATAAGTACTATCAGTGCCGCGATGGACAGATTACGGAGAAACTGTGCCCGGACGGTATGGTGTTCAACGATTACGACTCCGATCAGGAGAAGTGCGATCTGCCCTTCAACATTGACTGCAGCAAACGCCCAAAGCTCCAGACACCCATAGCGTCCCTGCACTGCCCCCGCCAGAACGGTTACTTTGCCAGCGAGACTGGTGCGTGCGATAAGTTCTACTACTGCGTGGACGGTATGTTCAACATGATCACCTGCCCGGAAGGGTTGGTGTTTAATCCACGCACCGGCATCTGCACCTGGCCGGACGAGGCCCAGAAGAAGGGCTGCTCGTCGGAGGACGTGTTCAAGTTTACCTGCCCGAAGGTG AACGAAACCGAGGGAGCTACgc ]
[+] EMBL BX622136 [ TGGCCAAGTTCAGTCTCAGTTTCCTAGTGCTCGTCAGTGTGATCTTCGGACTCTCCACTGCCCAGACGCAGCTCCGAAGGCAGTATGAGCTAAACCGGCGAACACCGGGCAGTGGCCCCGCGGTACGCAACCGTGAGCCTGCCGCGTCCGACGCACCAGTCCGCAGCCCAGTGCGTCAGCAGGGCCCGGTACAGGCGTCCGCCTCGGACGAGATTGATCCGGAGCTGTCGGAGAACTGTCCCGAGCCGAACGGATACTTTGCAGATGCGGAGCAGTGCGATAAGTACTATCAGTGCCGCGATGGACAGATTACGGAGAAACTGTGCCCGGACGGTATGGTGTTCAACGATTACGACTCCGATCAGGAGAAGTGCGATCTGCCCTTCAACATTGACTGCAGCAAACGCCCAAAGCTCCAGACACCCATAGCGTCCCTGCACTGCCCCCGCCAGAACGGTTACTTTGCCAGCGAGACTGGTGCGTGCGATAAGTTCTACTACTGCGTAGACGGTATGTTCAACATGATCACCTGCCCGGAAGGGTTGGTGTTTAATCCACGCACCGGCATCTGCACCTGGCCGGACGAGGCCCAGAAGAAGGGCTGCTCGTCGGAGGACGTGTTCAAGTTTACCTGCCCTAAGGTG AACGAAACCGANGGAGCGACCCATCCACGCTATGCCGATCCGGACGACTGTCAGTTCTTCTACGTGTGCA ]
[+] EMBL BX624497 [ GTGTGATCTTCGGACTCTCCACTGCCCAGACGCAGCTCCGAAGGCAGTATGAGCTAAACCGGCGAACACCGGGCAGTGGCCCCGCGGTACGCAACCGTGAGCCTGCCGCGTCCGACGCACCAGTCCGCAGCCCAGT ]
[+] EMBL BX622542 [ GTGATCTTCGGACTCTCCACTGCCCAGACGCAGCTCCGAAGGCAGTATGAGCTAAACCGGCGAACACCGGGCAGTGGCCCCGCGGTACGCAACCGTGAGCCTGCCGCGTCCGACGCACCAGTCCGCAGCCCAGTGCGTCAGCAGGGCCCGGTACAGGCGTCCGCCTCGGACGAGATTGATCCGGAGCTGTCGGAGAACTGTCCCGAGCCGAACGGATACTTTGCAGATGCGGAGCAGTGCGATAAGTACTATCAGTGCCGCGATGGACAGATTACGGAGAAACTGTGCCCGGACGGTATGGTGTTCAACGATTACGACTCCGATCAGGAGAAGTGCGATCTGCCCTTCAACATTGACTGCAGCAAACGCCCAAAGCTCCAGACACCCATAGCGTCCCTGCACTGCCCCCGCCAGAACGGTTACTTTGCCAGCGAGACTGGTGCGTGCGATAAGTTCTACTACTGCGTAGACGGTATGTTCAACATGATCACCTGCCCGGAAGGGTTGGTGTTTAATCCACGCACCGGCATCTGCACCTGGCCGGACGAGGCCCAGAAGAAGGGCTGCTCGTCGGAGGACGTGTTCAAGTTTACCTGCCCTAAGGTG AACGAAACCGAGGGAGCGACCCATCCACGCTATGCCGATCCGGACGACTGTCAGTTCTTCTACGTGTGCATCAACGGTGAAACACCGCGCCGCAACGGGTGCAAACTCGGACAGGC GTTCGACGATGTGGGCAAGCACTGCGAGT ]
[+] EMBL BX615902 [ CACGGCCCAGACGCAGCTCCGAAGGCAGCATGAGCTAAACCGGCGAACACCGGGCAGGGGCCCCGCGGTACGCAACCGTGAGCCGGCCGCGTCCGACGCACCAGTCCGCAGCCCAGGGCGTCAGCAGGGCCCGGGACAGGCGTCCGCCTCGGACGAGATGGATCCGGAGCTGTCGGAGAACTGTCCCGAGCCGAACGGATACTTTGCAGAAGCGGAGCAGTGCGAT ]
[+] EMBL BM650393 [ ccgCACCGGGTAGTGGCCCCGCGGTACGCAACCGTGAGCCTGCCGCGTCCGACGCACCAGTCCGCAGCCCAGTGCGTCAGCAGGGCCCGGTACAGGCGTCCGCCTCGGACTAGATTGATCCGGAGCTGTCGGAGAACTGTCCCGAGCCGAACGGATACTTTGCAGATGCGGAACAGTGCGATAAGTACTATCAGTGCCGCGATGGACAGATTACGGAGAAACTGTGCCCGGACGGTATGGTGTTCAACGATTACGACTCCGATCAGGAGAAGTGCGATCTGCCCTTCAACATTGACTGCAGCAAACGCCCAAAGCTCCAGACACCCATAGCGTCCCTGCACTGTCCCCGCCAGAACGGTTACTTTGCCAGCGAGACTGGTGCGTGCGATAAGTTCTACTACTGCGTGGACGGTATGTTCAACATGATCACCTGCCCGGAAGGGTTGGTGTTTAATCCACGCACCGGCATCTGCACCTGGCCGGACGAGGCCCAGAAGAAGGGCTGCTCGTCGGAGGACGTGTTCAAGTTTACCTGCCCGAAGGTA AACGAAACCGAGGGAGCGACCCATCCACGCTATGCCGATCCGGACGATTGTCAGTTCTTCTACGTGT ]
[+] EMBL BM640375 [ ccgCCGACGCACCAGTCCGCAGCCCAGTGCGTCAGCAGGGCCCGGTACAGGCGTCCGCCTCGGACGAGATTGATCCGGAGCTGTCGGAGAACTGTCCCGAGCCGAACGGATACTTTGCAGATGCGGAACAGTGTGACAAGTACTACCAGTGCCGCGATGGACAGATTACGGAGAAACTGTGCCCGGACGGTATGGTGTTCAACGATTACGACTCCGATCAGGAGAAGTGCGATCTGCCCTTCAACATTGACTGCAGCAAACGCCCAAAGCTCCAGACACCCATAGCGTCCCTGCACTGTCCCCGCCAGAACGGTTACTTTGCCAGCGAGACTGGTGCGTGCGATAAGTTCTACTACTGCGTAGACGGTATGTTCAACATGATCACCTGCCCGGAAGGGTTGGTGTTTAATCCACGCACCGGCATCTGCACCTGGCCGGACGAGGCCCAAAAGAAGGGCTGCTCGTCGGAGGACGTGTTCAAGTTTACCTGCCCGAAGGTA AACGAAACCGAGGGAGCGACCCATCCACGCTATGCCGATCCGGACGATTGTCAGTTCTTCTACGTGTGCATCAACGGTGAAACACCGCGCCGCAACGGGTGCAAACTCGGACAGGCGGTTCGACGATGTGGCCAAGCACTGCGAATGGGCCCGAAAGGTGCCAGATTGTGCCGACTGGGTATTAAGGAT ]
[+] EMBL BM649859 [ ccgCCGCAGCCCAGTGCGTCAGCAGGGCCCGGTACAGGCGTCCGCCTCGGACGAGATTGATCCGGAGCTGTCGGAGAACTGTCCCGAGCCGAACGGATACTTTGCAGATGCGGAACAGTGCGATAAGTACTATCAGTGCCGCGATGGACAGATTACGGAGAAACTGTGCCCGGACGGTATGGTGTTCAACGATTACGACTCCGATCAGGAGAAGTGCGATCTGCCCTTCAACATTGACTGCAGCAAACGCCCAAAGCTCCAGACACCCATAGCGTCCCTGCACTGTCCCCGCCAGAACGGTTACTTTGCCAGCGAGACTGGTGCGTGCGATAAGTTCTACTACTGCGTGGACGGTATGTTCAACATGATCACCTGCCCGGAAGGGTTGGTGTTTAATCCACGCACCGGCATCTGCACCTGGCCGGACGAGGCCCAGAAGAAGGGCTGCTCGTCGGAGGACGTGTTCAAGTTTACCTGCCCGAAGGTA AACGAAACCGAGGG ]
[+] EMBL BM628024 [ ccgCTTTGCAGATGCGGAACAGTGCGATAAGTACTATCAGTGCCGCGATGGACAGATTACGGAGAAACTGTGCCCGGACGGTATGGTGTTCAACGATTACGACTCCGATCAGGAGAAGTGCGATCTGCCCTTCAACATTGACTGCAGCAAACGCCCAAAGCTCCAGACACCCATAGCGTCCCTGCACTGTCCCCGCCAGAACGGTTACTTTGCCAGCGAGACTGGTGCGTGCGATAAGTTCTACTACTGCGTGGACGGTATGTTCAACATGATCACCTGCCCGGAAGGGTTGGTGTTTAATCCACGCACCGGCATCTGCACCTGGCCGGACGAGGCCCAGAAGAAGGGCTGCTCGTCGGAGGACGTGTTCAAGTTTACCTGCCCGAAGGTA AACGAAACCGAGGGAGCGACCCATCCACGCTATGCCGATCCGGACGATTGTCAGTTCTTCTACGTGTGCATCAACGGTGAAACACCGCGCCGCAACGGGTGCAAACTCGGACAGGC GTTCGACGATGTGGCCAAGCACTGCGAGTGGGCCCGAAAGGTGCCAGATTGTGCCGACT GGTA TAAGGATCGTCTTACCGACAAGCAACTCGAGGAGCTGGAAAATCCACCGACACCCAAGCCGAAGCCTGCCAACAGGCC ]
[+] EMBL BX616120 [ TACTGCGTAGACGGTATGTTCAACATGATCACCTGCCCGGAAGGGTTGGTGTTTAATCCACGCACCGGCATCTGCACCTGGCCGGACGAGGCCCAGAAGAAGGGCTGCTCGTCGGAGGACGTGTTCAAGTTTACCTGCCCTAAGGTT AACGAAACCGAGGGAGCGACCCATCCACGCTATGCCGATCCGGACGACTGTCAGTTCTTCTACGTGTGCATCAACGGTGAAACACCGCGCCGCAACGGGTGCAAACTCGGACAGGC GTTCGACGATGTGGCCAAGCACTGCGAGTGGGCCCGAAAGGTGCCAGATTGTGCCGACT GGTA TAAGGATCGTCTTACCGACAAGCAACTCGAGGAGCTGGAAAATCCACCGACACCCAAGCCGAAGCCTGCCAACAGCCCGTCGAAGGTTTCCCGCCGACGTCCGTCCAAGCGACCGAAGCAACCGGTTGATGATTCGGAACAGGCAGGCCCACATCCGTGTGACTCGTCCAGCTTTTAGTTTAGTCACATTGCATTGCCAACGGGCATGTTCTTTCTTGTTTGGGGAGGGCTAATAATTGTTAACTCCACCAAGCTGGAGTTGGATGAAGTAGAGCCAGGGGAAAAATACTCGCGTGTCTTTGTGTGTATGTATGT]
[+] EMBL BX614859 [ TGTTCAACATGATCACCTGCCCGGAAGGGTTGGTGTTTAATCCACGCACCGGTATCTGCACCGGGCCGGACGAGGCCCAAAAGAAGGGCTGCTCGTCGGAGGACGTGTTCAAGTTTACCTGCCCGAAGGGG AACGAAACCGAGGGAGCGACCCATCCACGCTAT ]
consensusID : consensus_9087#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 187 fasta sequence
[AAGTCCTACTACGGCGGGGACGGGATGCGCAACATGATCACCGGCCCGGAAGGGTGGGTGTGAAACCCACGCACCGGTATCTGCACCGGGCCGGACGAGGCCCAAAAGAAGGGCGGCTCGTCGGAGGACGTGTGCAAGTCAACCGGCCCGAAGGGGAACGAAACCGAGGGAGCGACCCATCCACGCT]
[+] EMBL BX612118 [AAGTCCTACTACGGCGGGGACGGGATGCGCAACATGATCACCGGCCCGGAAGGGTGGGTGTGAAACCCACGCACCGGTATCTGCACCGGGCCGGACGAGGCCCAAAAGAAGGGCGGCTCGTCGGAGGACGTGTGCAAGTCAACCGGCCCGAAGGGGAACGAAACCGAGGGAGCGACCCATCCACGCT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9087#0 CCCGGCGACCGTCAAGATGAAAGCAGTGGCCAAGTTCAGTCTCAGTTTCCTAGTGCTCGT 60
consensus_9087#1 ------------------------------------------------------------
consensus_9087#0 CAGTGTGATCTTCGGACTCTCCACTGCCCAGACGCAGCTCCGAAGGCAGTATGAGCTAAA 120
consensus_9087#1 ------------------------------------------------------------
consensus_9087#0 CCGGCGAACACCGGGCAGTGGCCCCGCGGTACGCAACCGTGAGCCTGCCGCGTCCGACGC 180
consensus_9087#1 ------------------------------------------------------------
consensus_9087#0 ACCAGTCCGCAGCCCAGTGCGTCAGCAGGGCCCGGTACAGGCGTCCGCCTCGGACGAGAT 240
consensus_9087#1 ------------------------------------------------------------
consensus_9087#0 TGATCCGGAGCTGTCGGAGAACTGTCCCGAGCCGAACGGATACTTTGCAGATGCGGAGCA 300
consensus_9087#1 ------------------------------------------------------------
consensus_9087#0 GTGCGATAAGTACTATCAGTGCCGCGATGGACAGATTACGGAGAAACTGTGCCCGGACGG 360
consensus_9087#1 ------------------------------------------------------------
consensus_9087#0 TATGGTGTTCAACGATTACGACTCCGATCAGGAGAAGTGCGATCTGCCCTTCAACATTGA 420
consensus_9087#1 ------------------------------------------------------------
consensus_9087#0 CTGCAGCAAACGCCCAAAGCTCCAGACACCCATAGCGTCCCTGCACTGCCCCCGCCAGAA 480
consensus_9087#1 ------------------------------------------------------------
consensus_9087#0 CGGTTACTTTGCCAGCGAGACTGGTGCGTGCGATAAGTTCTACTACTGCGTGGACGGTAT 540
consensus_9087#1 ----------------------------------AAGTCCTACTACGGCGGGGACGGGAT 26
**** ******* *** ****** **
consensus_9087#0 GTTCAACATGATCACCTGCCCGGAAGGGTTGGTGTTTAATCCACGCACCGGCATCTGCAC 600
consensus_9087#1 GCGCAACATGATCACCGGCCCGGAAGGGTGGGTGTGAAACCCACGCACCGGTATCTGCAC 86
* ************* ************ ***** ** *********** ********
consensus_9087#0 CTGGCCGGACGAGGCCCAGAAGAAGGGCTGCTCGTCGGAGGACGTGTTCAAGTTTACCTG 660
consensus_9087#1 CGGGCCGGACGAGGCCCAAAAGAAGGGCGGCTCGTCGGAGGACGTGTGCAAGTCAACCGG 146
* **************** ********* ****************** ***** *** *
consensus_9087#0 CCCGAAGGTGAACGAAACCGAGGGAGCGACCCATCCACGCTATGCCGATCCGGACGACTG 720
consensus_9087#1 CCCGAAGGGGAACGAAACCGAGGGAGCGACCCATCCACGCT------------------- 187
******** ********************************
consensus_9087#0 TCAGTTCTTCTACGTGTGCATCAACGGTGAAACACCGCGCCGCAACGGGTGCAAACTCGG 780
consensus_9087#1 ------------------------------------------------------------
consensus_9087#0 ACAGGCGTTCGACGATGTGGCCAAGCACTGCGAGTGGGCCCGAAAGGTGCCAGATTGTGC 840
consensus_9087#1 ------------------------------------------------------------
consensus_9087#0 CGACTGGTATAAGGATCGTCTTACCGACAAGCAACTCGAGGAGCTGGAAAATCCACCGAC 900
consensus_9087#1 ------------------------------------------------------------
consensus_9087#0 ACCCAAGCCGAAGCCTGCCAACAGGCCGTCGAAGGTTTCCCGCCGACGTCCGTCCAAGCG 960
consensus_9087#1 ------------------------------------------------------------
consensus_9087#0 ACCGAAGCAACCGGTTGATGATTCGGAACAGGCAGGCCCACATCCGTGTGACTCGTCCAG 1020
consensus_9087#1 ------------------------------------------------------------
consensus_9087#0 CTTTTAGTTTAGTCACATTGCATTGCCAACGGGCATGTTCTTTCTTGTTTGGGGAGGGCT 1080
consensus_9087#1 ------------------------------------------------------------
consensus_9087#0 AATAATTGTTAACTCCACCAAGCTGGAGTTGGATGAAGTAGAGCCAGGGGAAAAATACTC 1140
consensus_9087#1 ------------------------------------------------------------
consensus_9087#0 GCGTGTCTTTGTGTGTATGTATGT 1164
consensus_9087#1 ------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||