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Anopheles gambiae
cluster # 9088 cluster # 9088       Sequences # 14       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9088#0 length = 1345 sequences # 13  
consensus_9088#1 length = 1158 sequences # 1  

consensusID : consensus_9088#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 13
consensus length = 1345
fasta sequence
                              [CCGCAATGTAAAACTACATTCTTCATCGACGAAAAAAGGGTGCATTTTGTGTCGGAATTAAGTGTAAAAG-ACTGCTGAAACGATGCTCACGTCACGAGTTACTGTCTGCTGCAGCATGCATGGACTAAACCAGTCATGCTTTCGTACAAATTACATAATTTCATTCCGTTGTTTAGCGGACCGGGCCAAGGCAGTCGATTCGGGTGCGCAGGAAAAAGAGTCCTTCCAGTACTACACCATCGCATCGGAGCAGGTGACAAAAGGGCCAAGTCCAAAGCATGGCACGGATGTGGCCCTGCGCCGT-ATCAGCTTGGTCGATCTGGCCAAAAGCAAGCTGTACGAGGCACAATCATTCTACGACGAGTTTAGCGGTATGAACGAGGTGAAAGTAGCGCAGAACAAGGTGATCGAAATTCAGGACCAGCTGCAGCTCGTCCAGGAACGTCGACGGCACATCCTGCTGGAGCTGACGTTGGTGCGCAAACAGCTGCAGGACATTCACATCGAGCTGCAGAAGGCAACGCGGGGGGAGCATCGTTACGTGGAGCTGATCAAGCAGGAGTTTGATGTGCTCGCACGGGAGAAGGAGAAGAACCAAATCTTTCAAATCATCGACCAGGAGGAGCGGGAACTGTTCTCGCACCTGACGGCAGCGGTCAAGACGTCCCACGAGAAGGAACGCACGCAGGCGAACAACGTAAAGTACTGGTCCATCATTG-CGTCCGGCGTAGGGGCACTGTTGGGCATTGTGGCCACCTCGATAAACTATTACTTCCGCAACACCCAGTTCGAAACGATACGGAAAGCGGCGGAGGAAAACAATCGGAAGCTGGCCGGCATGGAGAAGCAGCTGGTGAACTTAGAGACGTCCATCGGACGAATGAACGTTGAATGGAACCGTTATTTGAGCGAGAAACGGGTAGCTGAGCAGCGCCGAGTGGCACGCAGCTCGGCCGAGTCCTGGGGGCGGGTACTTCCGGCGGCATTTGTCGCGATTCGCTCGTGTTTTCATACCAAAAGCTTAGCGAAGGCGGGGTTACTTTATCGGTATAACAATGTGGAACCTTTTTGTAGTTGCAGATTTGCCCCGGCTTCGAAACTCAGCTGGAGAGAATTTAATTGATTACCAAACGCTTAGGTCTGTGTTATAGTATCGGGTAACCTGAACCATTAAAACCTATCGACTAAGAGCATTTAAGATGTTTAGAACAACTTACAGGATTGTTGCATTTGTTAACTGGTACAGGGCGTGATTGCATAGTTGGTACGGTAGGATAGGAACCATATGATCGATACACGCGATATGGAATGGATGCAAATATAATAATTCTTTCATTGAACGTTG]

[+] EMBL BM602362             [CCGCAATGTAAAACTACATTCTTCATCGACGAAAAAAGGGTGCATTTTGTGTCGGAATTAAGTGTAAAAG ACTGCTGAAACGATGCTCACGTCACGAGTTACTGTCTGCTGCAGCATGCATGGACTAAACCAGTCATGCTTTCGTACAAATTACATAATTTCATTCCGTTGTTTAGCGGACCGGGCCAAGGCAGTCGATTCGGGTGCGCAGGAAAAAGAGTCCTTCCAGTACTACACCATCGCATCGGAGCAGGTGACAAAAGGGCCAAGTCCAAAGCATGGCACGGATGTGGCCCTGCGCCGT ATCAGCTTGGTCGATCTGGCCAAAAGCAAGCTGTACGAGGCACAATCATTCTACGACGAGTTTAGCGGTATGAATGAGGTGAAAGTAGCGCAGAACAAGGTGATCGAAATTCAGGACCAGCTGCAGCTCGTCCAGGAACGTCGACGGCACATCCTGCTGGAGCTGACGTTGGTGCGCAAACAGCTGCAGGACATTCACATCGAGCTGCAGAAGGCAACGCGGGGGGAGCATCGTTACGTGGAGCTGATCAAGCAGGAGTTTGATGTGCTCGCACGGGAGAAGGAGAAGAACCAAATCTTTCAAATCATCGACCAGGAGGAGCGGGAACTGTTCTCGCACCTGACGGCAGCGGTCAAGACGTCCCACGAGAAGGAACGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CNS0970N             [                            gaGAAAAAAGGGTGCATTTTGTGTCGGAATTAAGTGTAAAAG ACTGCTGAAACGATGCTCACGTCACGAGTTACTGTCTGCTGCAGCATGCATGGACTAAACCAGTCATGCTTTCGTACAAATTACATAATTTCATTCCGTTGTTTAGCGGACCGGGCCAAGGCAGTCGATTCGGGTGCGCAGGAAAAAGAGTCCTTCCAGTACTACACTATCGCATCGGAGCAGGTGACAAAAGGGCCAAGTCCAAAGCATGGCACGGATGTGGCCCTGCGCCGTGGGGGGCTTGGTCGATCTGGCCAAAAGCAAGCTGTACGAGGCACAATCATTCTACGACGAGTTTAGCGGTATGAACGAGGTGAAAGTAGCGCAGAACTTGGTGATCGAAATTCAGGACCAGCTGCAGCTCGTCCAGGAACGTCGACGGCACATCCTGCTGGAGCTGACGTTGGTGCGCAAACAGCTGCAGGACATTCACATCGAGCTGCAGAAGGCAACGCGGGGGGAGCATCGTTACGTGGAGCTGATCAAGCAGGAGTTTGATGTGCTCGCACGGGAGAAGGAGAAGAACCAAATCTTTCAAATCATCGACCAGGAGGAGCGGGAACTGTTCTCGCACCTGACGGCAGCGGTCAAGACGTCCCACGAGAAGGAACGCACGCAGGCGAACAACGTAAAGTACTGGTCCATCATTG CGTCCGGCGTAGGGGCACTGTTGGGCATTGTGGCCACCTCGATAAACTATTACTTCCGCAACACCCAGTTCGAAACGATACGGAAAGCGGCGGAGGAAAACAATCGGAAGCTGGCCGGCATGGAGAAGCAGCTGGTAAACTTAGAGACGTCCATCGGGCGAATGAACGTTGAATGGAACCGTTATTTGAGCGAGAAACGGGTAGCTGAGCAACGCCGAGTGGCACGCAGCTCCGC                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL BX621377             [                                  AAAGGGTGCATTTTGTGTCGGAATTAAGTGTAAAAG ACTGCTGAAACGATGCTCACGTCACGAGTTACTGTCTGCTGCAGCATGCATGGACTAAACCAGTCATGCTTTCGTACAAATTACATAATTTCATTCCGTTGTTTAGCGGACCGGGCCAAGGCAGTCGATTCGGGTGCGCAGGAAAAAGAGTCCTTCCAGTACTACACCATCGCATCGGAGCAGGTGACAAAAGGGCCAAGTCCAAAGCATGGCACGGATGTGGCCCTGCGCCGT ATCAGCTTGGTCGATCTGGCCAAAAGCAAGCTGTACGAGGCACAATCATTCTACGACGAGTTTAGCGGTATGAATGAGGTGAAAGTAGCGCAGAACAAGGTGATCGAAATTCAGGACCAGCTGCAGCTCGTCCAGGAACGTCGACGGCACATCCTGCTGGAGCTGACGTTGGTGCGCAAACAGCTGCAGGACATTCACATCGAGCTGCAGAAGGCAACGCGGGGGGAGCATCGTTACGTGGAGCTGATCAAGCAGGAGTTTGATGTGCTCGCACGAGAGAAGGAGAAGAACCAAATCTTTCAAATCATCGACCAGGAGGAGCGGGAACTGTTCTCGCACCTGACGGCAGCGGTCAAGACGTCCCACGAGAAGGAACGCACGCAGGCGAACAACGTAAAGTACTGGTCCATCATTG CGTCCGGCGTAGGGGCACTGTTGGGCATTGTGGCCACCTCGATAAACTATTACTTCCGCAACACCCAGTTCGAAACGATACGGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CNS098A8             [                                     GGGTG A TTTGTGTCGGTATTAAGTGTAAAAGCACTGCTGAAACGATGCTCACGTCACGAGTTACTGTCTGCTGCAGCATGCATGGACTAAACCAGTCATGCTTTCGTACAAATTACATAATTTCATTCCGTTGTTTAGCGGACCGGGCCAAGGCAGTCGATTCGGGTGCGCAGGAAAAAGAGTCCTTCCAGTACTACACTATCGCATCGGAGCAGGTGACAAAAGGGCCAAGTCCAAAGCATGGCACGGATGTGGCCCTGCGCCGT ATCAGCTTGGTCGATCTGGCCAAAAGCAAGCTGTACGAGGCACAATCATTCTACGACGAGTTTAGCGGTATGAACGAGGTGAAAGTAGCGCAGAACAAGGTGATCGAAATTCAGGACCAGCTGCAGCTCGTCCAGGAACGTCGACGGCACATCCTGCTGGAGCTGACGTTGGTGCGCAAACAGCTGCAGGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL CNS08D48             [                                                           AAGTGTAAAAG ACTGCCGAAACGATGTTCACGTCACGAGTTACTGTCTGCTGCAGCATGCATGGACTAAACCAGTCATGCTTTCGTACAAATTACATAATTTCATTCCGTTGTTTAGCGGACCGGGCCAAGGCAGTCGATTCGGGTGCGCAGGAAAAAGAGTCCTTCCAGTACTACACCATCGCATCGGAGCAGGTGACAAAAGGGCCAAGTCCAAAGCATGGCACGGATGTGGCCCTGCGCCGT ATCAGCTTGGTCGATCTGGCCAAAAGCAAGCTGTACGAGGCACAATCATTCTACGACGAGTTTAGCGGTATGAACGAGGTGAAAGTAGCGCAGAACAAGGTGATCGAAATTCAGGACCAGCTGCAGCTCGTCCAGGAACGTCGACGGCACATCCTGCTGGAGCTGACGTTGGTGCGCAAACAGCTGCAGGACATTCACATCGAGCTGCAGAAGGCAACGCGGGGGGAGCATCGTTACGTGGAGCTGATCAAGCAGGAGTTTGATGTGCTCGCACGGGAGAAGGAGAAGAACCAAATCTTTCAAATCATCGACCAGGAGGAGCGGGAACTGTTTTCGCACCTGACGGCAGCGGTCAAGACGTCCCACGAGAAGGAACGCACGCAGGCGAACAACGTAAAGTACTGGTCCATCATTGCCCGCCGGCGTAGGGGCACTGTTGGGCATTGTGGCCACTTCGATAAACTATTACTTCCGCAACACCCAGTTCGAAACGATACGGAAAGCGGCGGAGGAAAACAATCGGAAGCTGGCCGGCATGGAGAAGCAGCTGGTGAACTTAGAGACGTCCATCGGACGAATGAACGTTGAATGGAACCGTTATTTGAGCGAGAAACGGGTAGCTGAGCAGCGCCGAGTGGCACGCAGCTCGGCCGAGTCCTGG                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CNS08D47             [                                                                       ACTGCCGAAACGATGTTCACGTCACGAGTTACTGTCTGCTGCAGCATGCATGGACTAAACCAGTCATGCTTTCGTACAAATTACATAATTTCATTCCGTTGTTTAGCGGACCGGGCCAAGGCAGTCGATTCGGGTGCGCAGGAAAAAGAGTCCTTCCAGTACTACACCATCGCATCGGAGCAGGTGACAAAAGGGCCAAGTCCAAAGCATGGCACGGATGTGGCCCTGCGCCGT ATCACCCCCGTCGATCTGGCCAAAAGCAAGCTGTACGAGGCACAATCATTCTACGACGAGTTTAGCGGTATGAACGAGGTGAAAGTAGCGCAGAACAAGGTGATCGAAATTCAGGACCAGCTGCAGCTCGTCCAGGAACGTCGACGGCACATCCTGCTGGAGCTGACGTTGGTGCGCAAACAGCTGCAGGACATTCACATCGAGCTGCAGAAGGCAACGCGGGGGGAGCATCGTTACGTGGAGCTGATCAAGCAGGAGTTTGATGTGCTCGCACGGGAGAAGGAGAAGAACCAAATCTTTCAAATCATCGACCAGGAGGAGCGGGAACTGTTCTCGCACCTGACGGCAGCGGTCAAGACGTCCCACGAGAAGGAACGCACGCAGGCGAACAACGTAAAGTACTGGTCCATCATTG CGTCCGGCGTAGGGGCACTGTTGGGCATTGTGGCCACTTCGATAAACTATTACTTCCGCAACACCCAGTTCGAAACGATACGGAAAGCGGCGGAGGAAAACAATCGGAAGCTGGCCGGCATGGAGAAGCAGCTGGTGAACTTAGAGACGTCCATCGGACGAATGAACGTTGAATGGAACCGTTATTTGAGCGAGAAACGGGTAGCTGAGCAGCGCCGAGTGGCACGCAGCTCGGCCGAGTCCTGGGGGCGGGTACTTCCGGCGGCATTTG                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CNS08L4U             [                                                                                                                                       CATGCTTTCGTACAAATTACATAATTTCATTCCGTTGTTTAGCGGACCGGGCCAAGGCAGTCGATTCGGGTGCGCAGGAAAAAGAGTCCTTCCAGTACTACACCATCGCATCGGAGCAGGTGACAAAAGGGCCAAGTCCAAAGCATGGCACGGATGTGGCCCTGCGCCGT ATCAGCTTGGTCGATCTGGCCAAAAGCAAGCTGTACGAGGCACAATCATTCTACGACGAGTTTAGCGGTATGAACGAGGTGAAAGTAGCGCAGAACAAGGTGATCGAAATTCAGGACCAGCTGCAGCTCGTCCAGGAACGTCGACGGCACATCCTGCTGGAGCTGACGTTGGTGCGCAAACAGCTGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CNS09BLK             [                                                                                                                                                                                                                             TCCTTCCAGTACTACACCATCGCATCGGAGCAGGTGACAAAAGGGCCAAGTCCAAAGCATGGCACGGATGTGGCCCTGCGCCGT ATCAGCTTGGTCGATCTGGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CNS08Q21             [                                                                                                                                                                                                                                                                                                                                                                                                      GTAGCGCAGAACAAGGTGATCGAAATTCAGGACCAGCTGCAGCTCGTCCAGGAACGTCGACGGCACATCCTGCTGGAGCTGACGTTGGTGCGCAAACAGCTGCAGGACATTCACATCGAGCTGCAGAAGGCAACGCGGGGGGAGCATCGTTACGTGGAGCTGATCAAGCAGGAGTTTGATGTGCTCGCACGGGAGAAGGAGAAGAACCAAATCTTTCAAATCATCGACCAGGAGGAGCGGGAACTGTTCTCGCACCTGACGGCAGCGGTCAAGACGTCCCACGAGAAGGAACGCACGCAGGCGAACAACGTAAAGTACTGGTCCATCATTG CGTCCGGCGTAGGGGCACTGTTGGGCATTGTGGCCACTTCGATAAACTATTACTTCCGCAACACCCAGTTCGAAACGATACGGAAAGCGGCGGAGGAAAACAATCGGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CNS0970O             [                                                                                                                                                                                                                                                                                                                                                                                                                                                        gaAACGTCGACGGCACATCCTGCTGGAGCTGACGTTGGTGCGCAAACAGCTGCAGGACATTCACATCGAGCTGCAGAAGGCAACGCGGGGGGAGCATCGTTACGTGGAGCTGATCAAGCAGGAGTTTGATGTGCTCGCACGGGAGAAGGAGAAGAACCAAATCTTTCAAATCATCGACCAGGAGGAGCGGGAACTGTTCTCGCACCTGACGGCAGCGGTCAAGACGTCCCACGAGAAGGAACGCACGCAGGCGAACAACGTAAAGTACTGGTCCATCATTG CGTCCGGCGTAGGGGCACTGTTGGGCATTGTGGCCACCTCGATAAACTATTACTTCCGCAACACCCAGTTCGAAACGATACGGAAAGCGGCGGAGGAAAACAATCGGAAGCTGGCCGGCATGGAGAAGCAGCTGGTAAACTTAGAGACGTCCATCGGGCGAATGAACGTTGAATGGAACCGTTATTTG                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CNS08Q22             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             CGGGGGGAGCATCGTTACGTGGAGCTGATCAAACAGGAGTTTGATGTGCTCGCACGGGAGAAGGAGAAGAACCAAATCTTTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CNS08L4V             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TCGAAACGATACGGAAAGCGGCGGAGGAAAACAATCGGAGGCTGGCCGGCATGGAGAAGCAGCTGGTGAACTAAGAGACGTCCATCGGACGAATGAACGTTGAATGGAACCGTTATTTGAGCGAGAAACGGGTAGTTGAGCAGCGCCAAGTGGCACGCAGCTCGGCCGAGTCCTGCGGGCAGGTACTTCCGGCGGC                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CNS098A9             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GAATGAACGTTGAATGGAACCGTTATTTGAGCGAGAAACGGGTAGCTGAGCAACGCCGAGTGGCACGCAGCTCGGCCGAGTCCT GGGGCGGATACTTCCGGCGGCATTTGTCGCGATTCGCTCGTGTTTTCATACCAAAAGCTTAGCGAAGGCGGGGTTACTTTATCGGTATAACAATGTGGAACCTTTTTGTAGTTGCAGATTTGCCCCGGCTTCGAAACTCAGCTGGAGAGAATTTAATTGATTACCAAACGCTTAGGTCTGTGTTATAGTATCGGGTAACCTGAACCATTAAAACCTATCGACTAAGAGCATTTAAGATGTTTAGAACAACTTACAGGATTGTTGCATTTGTTAACTGGTACAGGGCGTGATTGCATAGTTGGTACGGTAGGATAGGAACCATATGATCGATACACGCGATATGGAATGGATGCAAATATAATAATTCTTTCATTGAACGTTG]


>consensus_9088#0 CCGCAATGTAAAACTACATTCTTCATCGACGAAAAAAGGGTGCATTTTGTGTCGGAATTA AGTGTAAAAGACTGCTGAAACGATGCTCACGTCACGAGTTACTGTCTGCTGCAGCATGCA TGGACTAAACCAGTCATGCTTTCGTACAAATTACATAATTTCATTCCGTTGTTTAGCGGA CCGGGCCAAGGCAGTCGATTCGGGTGCGCAGGAAAAAGAGTCCTTCCAGTACTACACCAT CGCATCGGAGCAGGTGACAAAAGGGCCAAGTCCAAAGCATGGCACGGATGTGGCCCTGCG CCGTATCAGCTTGGTCGATCTGGCCAAAAGCAAGCTGTACGAGGCACAATCATTCTACGA CGAGTTTAGCGGTATGAACGAGGTGAAAGTAGCGCAGAACAAGGTGATCGAAATTCAGGA CCAGCTGCAGCTCGTCCAGGAACGTCGACGGCACATCCTGCTGGAGCTGACGTTGGTGCG CAAACAGCTGCAGGACATTCACATCGAGCTGCAGAAGGCAACGCGGGGGGAGCATCGTTA CGTGGAGCTGATCAAGCAGGAGTTTGATGTGCTCGCACGGGAGAAGGAGAAGAACCAAAT CTTTCAAATCATCGACCAGGAGGAGCGGGAACTGTTCTCGCACCTGACGGCAGCGGTCAA GACGTCCCACGAGAAGGAACGCACGCAGGCGAACAACGTAAAGTACTGGTCCATCATTGC GTCCGGCGTAGGGGCACTGTTGGGCATTGTGGCCACCTCGATAAACTATTACTTCCGCAA CACCCAGTTCGAAACGATACGGAAAGCGGCGGAGGAAAACAATCGGAAGCTGGCCGGCAT GGAGAAGCAGCTGGTGAACTTAGAGACGTCCATCGGACGAATGAACGTTGAATGGAACCG TTATTTGAGCGAGAAACGGGTAGCTGAGCAGCGCCGAGTGGCACGCAGCTCGGCCGAGTC CTGGGGGCGGGTACTTCCGGCGGCATTTGTCGCGATTCGCTCGTGTTTTCATACCAAAAG CTTAGCGAAGGCGGGGTTACTTTATCGGTATAACAATGTGGAACCTTTTTGTAGTTGCAG ATTTGCCCCGGCTTCGAAACTCAGCTGGAGAGAATTTAATTGATTACCAAACGCTTAGGT CTGTGTTATAGTATCGGGTAACCTGAACCATTAAAACCTATCGACTAAGAGCATTTAAGA TGTTTAGAACAACTTACAGGATTGTTGCATTTGTTAACTGGTACAGGGCGTGATTGCATA GTTGGTACGGTAGGATAGGAACCATATGATCGATACACGCGATATGGAATGGATGCAAAT ATAATAATTCTTTCATTGAACGTTG



consensusID : consensus_9088#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1158
fasta sequence
                              [GGCAGAATACCCGCGGTTATATAAAAGACTGCTGAAACGATCGCTCACGTTACGAGTTACTGTCTAGCTAGCAGAAGGCAACGCGGGGGGAGCATCGTTACGTAGGAGCTGATCAAGCAGGAGTATTGATAGTAGCTCGCACGAGAGAAGGAGAAGAACCAAATACTATATCAAATACATACGACCAGAGAGTGAGCGGGAACTAGTTCTACGCACCTAGTACGGCAGCTGGTCAAGACGTCCCACGAGTAAGGAACGCACTGCAGTGCGAACAACGTAACACGTACTAGGTACCATCATTGCGTCCGGCCGTAGCGGGCACTGTATGGGCATATTGTAGGCCACCTACGGATCAAACGTAANATANCTNTACCGCCAACACCCCAGCATANACAACACCGATCAACAGGGAAAGCGCGACGCGAGCGAACACCNACTACCGGAAGGCNCGGGCGCCGGCATAGACGANAAGCAGNGCTAGGTCAACCNACTACGCAGACAGTACCCAATACGNACGCCGCAACACTAAGCAACACCAGGNCACAGGCAACCNCNCGGCGCCACACCCCGAGANCGACATCCACAGGNACGCCGGCACACAAAACAACAGGNGCCAAAGCCCCAGGAGGCNAGGCCGCCCCCGCACCNCNGGGNCCACCGACCAAGCCTACGGACCCCCCGGCACGATACCCCNAGCAGGAGGCAGGGAGCAACCGCNACNCCCGGANCGGGGCACAAACACCGGACCCCGACNNNGACACCACGCCCAACNGGCATNGGCAAAACCAACCACATACAACNCCCAACACNAANGAAACAAACANCCCGNAACNAAGGGNGNCCGANGGCACNACCACCAGCCCAAAAAATANAACAGAGACNAAATACAACCCCGGNACCACTNCAGGCGCANCGCCCCCCCCAAAAACAGGGANAAAACANACGGGCGACCAACANACCAACNGGNACCCCACCGNAGNGGCACACACGAAGACAACCACCAACNCCCAGGGACNCACCACCGNCAACCACCCNANCCACCCNGNCCGCACCACACCAAACCCACGAGCCAACACANAGACACNCGAGGCGNGCNGCACCAAGCNCACACNAGNGCGTNCAACANACCCAAGAACACNAACGACCAAACACCCACCA]

[+] EMBL AL929997             [GGCAGAATACCCGCGGTTATATAAAAGACTGCTGAAACGATCGCTCACGTTACGAGTTACTGTCTAGCTAGCAGAAGGCAACGCGGGGGGAGCATCGTTACGTAGGAGCTGATCAAGCAGGAGTATTGATAGTAGCTCGCACGAGAGAAGGAGAAGAACCAAATACTATATCAAATACATACGACCAGAGAGTGAGCGGGAACTAGTTCTACGCACCTAGTACGGCAGCTGGTCAAGACGTCCCACGAGTAAGGAACGCACTGCAGTGCGAACAACGTAACACGTACTAGGTACCATCATTGCGTCCGGCCGTAGCGGGCACTGTATGGGCATATTGTAGGCCACCTACGGATCAAACGTAANATANCTNTACCGCCAACACCCCAGCATANACAACACCGATCAACAGGGAAAGCGCGACGCGAGCGAACACCNACTACCGGAAGGCNCGGGCGCCGGCATAGACGANAAGCAGNGCTAGGTCAACCNACTACGCAGACAGTACCCAATACGNACGCCGCAACACTAAGCAACACCAGGNCACAGGCAACCNCNCGGCGCCACACCCCGAGANCGACATCCACAGGNACGCCGGCACACAAAACAACAGGNGCCAAAGCCCCAGGAGGCNAGGCCGCCCCCGCACCNCNGGGNCCACCGACCAAGCCTACGGACCCCCCGGCACGATACCCCNAGCAGGAGGCAGGGAGCAACCGCNACNCCCGGANCGGGGCACAAACACCGGACCCCGACNNNGACACCACGCCCAACNGGCATNGGCAAAACCAACCACATACAACNCCCAACACNAANGAAACAAACANCCCGNAACNAAGGGNGNCCGANGGCACNACCACCAGCCCAAAAAATANAACAGAGACNAAATACAACCCCGGNACCACTNCAGGCGCANCGCCCCCCCCAAAAACAGGGANAAAACANACGGGCGACCAACANACCAACNGGNACCCCACCGNAGNGGCACACACGAAGACAACCACCAACNCCCAGGGACNCACCACCGNCAACCACCCNANCCACCCNGNCCGCACCACACCAAACCCACGAGCCAACACANAGACACNCGAGGCGNGCNGCACCAAGCNCACACNAGNGCGTNCAACANACCCAAGAACACNAACGACCAAACACCCACCA]


>consensus_9088#1 GGCAGAATACCCGCGGTTATATAAAAGACTGCTGAAACGATCGCTCACGTTACGAGTTAC TGTCTAGCTAGCAGAAGGCAACGCGGGGGGAGCATCGTTACGTAGGAGCTGATCAAGCAG GAGTATTGATAGTAGCTCGCACGAGAGAAGGAGAAGAACCAAATACTATATCAAATACAT ACGACCAGAGAGTGAGCGGGAACTAGTTCTACGCACCTAGTACGGCAGCTGGTCAAGACG TCCCACGAGTAAGGAACGCACTGCAGTGCGAACAACGTAACACGTACTAGGTACCATCAT TGCGTCCGGCCGTAGCGGGCACTGTATGGGCATATTGTAGGCCACCTACGGATCAAACGT AANATANCTNTACCGCCAACACCCCAGCATANACAACACCGATCAACAGGGAAAGCGCGA CGCGAGCGAACACCNACTACCGGAAGGCNCGGGCGCCGGCATAGACGANAAGCAGNGCTA GGTCAACCNACTACGCAGACAGTACCCAATACGNACGCCGCAACACTAAGCAACACCAGG NCACAGGCAACCNCNCGGCGCCACACCCCGAGANCGACATCCACAGGNACGCCGGCACAC AAAACAACAGGNGCCAAAGCCCCAGGAGGCNAGGCCGCCCCCGCACCNCNGGGNCCACCG ACCAAGCCTACGGACCCCCCGGCACGATACCCCNAGCAGGAGGCAGGGAGCAACCGCNAC NCCCGGANCGGGGCACAAACACCGGACCCCGACNNNGACACCACGCCCAACNGGCATNGG CAAAACCAACCACATACAACNCCCAACACNAANGAAACAAACANCCCGNAACNAAGGGNG NCCGANGGCACNACCACCAGCCCAAAAAATANAACAGAGACNAAATACAACCCCGGNACC ACTNCAGGCGCANCGCCCCCCCCAAAAACAGGGANAAAACANACGGGCGACCAACANACC AACNGGNACCCCACCGNAGNGGCACACACGAAGACAACCACCAACNCCCAGGGACNCACC ACCGNCAACCACCCNANCCACCCNGNCCGCACCACACCAAACCCACGAGCCAACACANAG ACACNCGAGGCGNGCNGCACCAAGCNCACACNAGNGCGTNCAACANACCCAAGAACACNA ACGACCAAACACCCACCA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9088#0      CCGCAATGTAAAACTACATTCTTCATCGACGAAAAAAGGGTGCATTTTGTGTCGGAATTA 60
consensus_9088#1      ----------------------------------------GGCAGAATAC-CCGCGGTTA 19
                                                               ***   *    **   ***

consensus_9088#0      AGTGTAAAAGACTGCTGAAACGAT-GCTCACGTCACGAGTTACTGTCT-GCT-GCAGCAT 117
consensus_9088#1      --TATAAAAGACTGCTGAAACGATCGCTCACGTTACGAGTTACTGTCTAGCTAGCAGAAG 77
                        * ******************** ******** ************** *** **** * 

consensus_9088#0      GCATGGACTAAACCAGTCATGCTTTCGTACAAATTACATAATTTCATTCCGTTGTT--TA 175
consensus_9088#1      GCAACG--CGGGGGGAGCATCGTTACGTAGGAGCTG-ATCAAGCAGGAGTATTGATAGTA 134
                      ***  *           ***  ** ****  *  *  ** *          *** *  **

consensus_9088#0      GCGGACCGGGCCAAGGCAGTCGATTCGGGTGCGCAGGAAAAAGAGTCCTTCCAGTACTAC 235
consensus_9088#1      GCTCGCACGAGAGAAGGAGAAGAACCAAATACTATATCAAATACATACGACCAGAG---- 190
                      **   *  *    * * **  **  *   * *      ***    * *  ****      

consensus_9088#0      ACCATCGCATCGGAGCAGGTGACAAAAGGGCCAAGTCCAAAGCATGGCACGGATGTGGCC 295
consensus_9088#1      ---AGTGAGCGGGAACTAGT--TCTACGCACCTAGTACGGCAGCTGGTCAAGACGT---C 242
                         *  *    *** *  **     * *  ** *** *      ***    ** **   *

consensus_9088#0      CTGCGCCGTATCAGCTTGGTCGATCTGGCCAAAAGCAAGCTGTACGAGGCACAATCATTC 355
consensus_9088#1      CCACGAGTAAGGAACGCACTGCAGTGCGAACAACGTAACACGTACTAGGTACCATCATTG 302
                      *  **    *  * *    *  *    *   ** * **   **** *** ** ****** 

consensus_9088#0      TACGACGAGTTTAGCGGTATGAACGAGGTGAAAGTAGCGCAGAACAA--GGTGATCGAAA 413
consensus_9088#1      CGTC-CGGCCGTAGCGG---GCACTGTATGGGCATATTGTAGGCCACCTACGGATCAAAC 358
                           **    ******   * **    **    **  * **  **      **** ** 

consensus_9088#0      TTCAGGACCAGCTGCAGCTCGTCCAGGAACGTCGACGGCACATCCTGCTGGAGCTGACGT 473
consensus_9088#1      GTAANATANCTNTACCGCCAACACCCCAGCATANACAACACCGATCAACAGGGAAAGCGC 418
                       * *        * * **     *   * * *  **  ***         * *    ** 

consensus_9088#0      TG-GTGCGCAAACAGCTGCAGGACATTCACATCGAGCTGCAGAAGGCAACGCGG--GGGG 530
consensus_9088#1      GACGCGAGCGAACACCNAC--------TACCGGAAGGCNCGGGCGCCGGCATAGACGANA 470
                         * * ** **** *  *         **    **   * *  * *  *   *  *   

consensus_9088#0      AGCATCGTTACGTGGAGCTGATCAAGCAG---GAGTTTGATGTGCTCGCACGGGAGAAGG 587
consensus_9088#1      AGCAGNGCTAGGTCAA-CCNACTACGCAGACAGTACCCAATACGNACGC-CGCAACACTA 528
                      ****  * ** **  * *  *  * ****   *      **  *  *** **  * *   

consensus_9088#0      AGAAGAACCAAATCTTTCAAATCATCGACCAGGAGGAGCGGGAACTGTTCTCGCACCTGA 647
consensus_9088#1      AGCAACACCAGGNC------ACAGGCAACCNCNCGGCGCCACA-----CCCCGAGANCGA 577
                      ** *  ****   *      *    * ***    ** **   *      * **     **

consensus_9088#0      CGGCAGCGGTCAAGACGTCCCACGAGAAGGAACGCACGCAGGCGAACAACGTAAAGTACT 707
consensus_9088#1      CATCCACAGGNACGCCGGCACACAAAACA------ACAGGNGCCAAAGCCCCAGGAGGCN 631
                      *  *  * *  * * ** * *** * *        **    ** **   *  *     * 

consensus_9088#0      GGTCCATCATTGCGTCCGGCGTAGGGGCACTGTTGGGCATTGTGGCCACCTCGATAAACT 767
consensus_9088#1      AGGCCGCCCCCGCACCNCN---GGGNCCACCGACCAAGCCTACGGACCCCCCGGCA--CG 686
                       * **  *   **  *       **  *** *        *  ** * ** **  *  * 

consensus_9088#0      ATTACTTCCGCAACACCCAGTTCGAAACGATACGGAAAGCGGCGGAGGAAAACAATCGGA 827
consensus_9088#1      ATACCCCNAGCAGGAGGCAGGGAGCAACCGCNACNCCCGGANCGGGGCACAAACACCGGA 746
                      **  *    ***  *  ***   * ***          *   *** * * **  * ****

consensus_9088#0      AGCTGGCCGGCATGGAGAAGCAGCTGGTGAACTTAGAGACGTCCATCGGACGAATGAACG 887
consensus_9088#1      CCCCGACNNNGACAC---CACGCCCAACNGGCATNGGCAAAACCAACC-ACATAC-AACN 801
                        * * *    *        *  *       * * *  *   *** *  **  *  *** 

consensus_9088#0      TTGAATGGAACCGTTATTTGAGCGAGAAACGGGTAGCTGAGCAGCGCCGAGTGGCACGCA 947
consensus_9088#1      CCCAA------CACNAANGAAACAAACANCCCGNAACNAAG-GGNGNCCGANGGCACNAC 854
                         **      *   *    * * *  * *  * * *  **  * * *    *****   

consensus_9088#0      GCTCGGCCGAGTCCTGGGGGCGGGTACTTCCGGCGGCATTTGTCGCGATTCGCTCGTGTT 1007
consensus_9088#1      CACCAGCCCAAAAAATANAACAGAGACNAAATACAACCCCGGNACCACTNCAGGCGCANC 914
                         * *** *          * *  **      *  *    *   *  * *   **    

consensus_9088#0      -TTCATACCAAAAGCTTAGCGAAGGCGGGGTTACTTTATCGGTATAACAATGTGGAACCT 1066
consensus_9088#1      GCCCCCCCCAAAAACAGGGANAAAACANA--CGGGCGACCAACANACCAACN-GGNACCC 971
                         *   ****** *   *  **  *           * *   * * ***   ** *** 

consensus_9088#0      TTTTGTAGTTGCAGATTTGCCCCGGCTTCGAAACTCAGCTGGAGAGAATTTAATTGATTA 1126
consensus_9088#1      CACCGNAGNGGCACA-----CACGAAGACAACCACCAACNCCCAGGGACNCACC--ACCG 1024
                          * **  *** *     * **    * *    ** *      * *   *    *   

consensus_9088#0      CCAAACGCTTAGGTCTGTGTTATAGTATCGGGTAACCTGAACCATTAAAACCTATCGACT 1186
consensus_9088#1      NCAACCACCCNANCCACCCNGNCCGCACCAC---ACCAAACCCAC--GAGCCAAC--ACA 1077
                       *** * *      *         * * *     ***  * ***    * ** *   ** 

consensus_9088#0      AAGAGCATTTAAGATGTTTAGAACAACTTACAGGATTGTTGCATTTGTTAACTGGTACAG 1246
consensus_9088#1      NAGA-CACNCGAGGCGNGCNGCACCAAGCNCAC-ACNAGNGCGTNCAACANACCCAAGAA 1135
                       *** **    **  *    * ** *    **  *     ** *     *      * * 

consensus_9088#0      GGCG--TGATTGCATAGTTGGTACGGTAGGATAGGAACCATATGATCGATACACGCGATA 1304
consensus_9088#1      CACNAACGACCAAACACCCACCA------------------------------------- 1158
                        *    **    * *      *                                     

consensus_9088#0      TGGAATGGATGCAAATATAATAATTCTTTCATTGAACGTTG 1345
consensus_9088#1      -----------------------------------------
                                                               




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)