cluster # 9097

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Anopheles gambiae
cluster # 9097 cluster # 9097 Sequences # 14 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9097#0 length = 1926 sequences # 13

consensus_9097#1 length = 449 sequences # 1

consensusID : consensus_9097#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 13
consensus length = 1926
fasta sequence

                              [AATCCCGAGGTTATACACAGCATTATCGCCCAAACCGCGG-CTACTGCACAACCACAACTCACGAACCACTTGTCATCTAGAAATCTTCCAACAGAGGTGGTTCA-GTTTACTTCTTGCACGGTTCGGGTTGTGATTGTATCAGAGCAGTTGGTGCTGTGTTGTGTCCCTTTTTTGTTCGTCTGATATTTTA-GAGCTTTGAAAATTCAAATCATATCAAGCTGCAATGGCCAACAGCGAGCTGATTGTTAGCACCGGCTACGGACCGGT-TCAGGGCACAG-CCAGGACATCGCTCTACGGGACTGGGTACGTCAGCTTCCA-GGGCATCCCGTACGCGAAACCTCCGGTCGGAGAGCTACGTTTTAAGGATCCCACGCCACCTGAAAACTGGACGCAGGTTCTCGATTGTACCGAGCAATGTGACCCTTGCTTTCATTTTGATCGGCGCGTTAACAAAATTGTCG-GCAGTGAGGACAGCCTGAAGCTGAACATATTCAGCAAAACGATTAAACCCACCAAACCTCTGCCCGTCATGGTGTACATCTACGGCGGTGGATTCGTCGAAGGCACCAGCGGAACC-GAACT-GTACGGTCCGGACTATCTGATCGAAAAAGACATCGTGCTGGTAACGCTTAACTATCGCGTCGG-AGCACTCGGTTTCCTCTGCTGCCAATCA-CCCACGGCCGGTGTCCC-GGGCAATGCGGGCCTGAAAGACCAAAGGCTGGCGCT-CCAATGGGTGCGGG-ACAACATTGCGTCCTTTGGCGGCGATCCCAGCGCGAACACCAAAAAAAAACACAGCGCCGGGGGAGCGTCGGTACAGTATCACACGATTGCGGGCGCGTCGAAAAATTTGTTCCAGCGTGCCATCATCATGTCGGGCAGCACGATGTGCAGCTGGGCCCTTACACCCCAGCGCAACTGGCCGGAAAAACTGGCCAAAGCCATCGGTTGGCAGGGCGAGGGTGATGAGGAGGCGGCGCTGCAATATTTGCGCCAAGCTTCGCCGGAAAGCATTGTGGATCATCAGGAGAAATTGTTCGGACCGCAGGAAATACAAGAAGGCCTGCTTTCTCCATTCGCGCCAACGATCGAACCGTACGAGAGTGAGGTATGTTTCATCCCACGATCGCCGTTCGAGATGTCCCGCACTGCGTGGGGAAATTCCATCGACATCATGATCGGCGGAACCTCCGAAGAGGGCCTGATACTGCTGCCGAAAGTGAAACCACAGCTTCCAAGCATGCTGCAGGATCCGCGACTGTTTGTAGGCAATGTTCCCTTCCATCTCAAGCTTAGCCTAGAGCAGCGTATGGCTTTCGGGGAGCAGCTGAAGCAACTCTACTATCCCGATTCTAACCCCTCGATCGACAACCTGG-A-TGGATTCGTGAACATGGCCTCGGATCGCATCTT-TTGGCACGAT-CTGCATCGTACCATA-CTGGCACGGGCCAACTACGCCTGCACTGCCAAAACGTTCGTGTATCGCTTCTGCGTTGATTCTCCGTTCTTTAACCACTATCGTATCCACATGGTCGACCCGAACGCACGTGGGACGTC-TCATGCGGATGAAATTTCTTACCTATTTTCAAACATCTTCGCGAAACCCCTGGACAAGAGCACGCTCGAGTACCGTGCCATCCAGCACTTGGTCGATATCTTCACCAGTTTTGCCACCAACAGCGATCCCAACTGTGATAGCACCGCCAGTCTGTCGTGGACGGCCGTCCCGAAAACGGCACCGCCGTACAATTGCCTGAACATCTCCAACGATGGTGTGGAGGTTGTGGAGCTGCCGGAATCAAGACGTCTGCAGCTGTGGGATTCGTTCTACGTAAATGATGCACTCTTCTAGACAGTACGATATTATTCGACGAAATTTTGAACAACAATAAATTCTTTATGTATCGTGTGCAAAAAAAAACAAAAAGNCAG]

[+] EMBL AL930508             [AATCCCGAGGTTATACACAGCATTATCGCCCAAACCGCGG CTACTG ACAACCACAACTCACGAACCACTTGTCATCTAGAAATCTTCCAACAGAGGTGGTTCACGTTTACTTCTTGCACGGTTCGGGTTGTGATTGTATCAGAGCAGTTGGTGCTGTGTTGTGTCCCTTTTTTGTTCGTCTGATATTTTA GAGCTTTGAAAATTCCAATCATATCAAGCTGCAATGGCCAACAGCGAGCTGATTGTTAGCACCGGCTACGGACCGGT TCAGGGCACAG CCAGGACATCGCTCTACGGGACTGGGTACGTCAGCTTCCAGGGGCATCCCGTACGCGAAACCTCCGGTCGGAGAGCTACGTTTTAAGGATCCCACGCCACCTGAAAACTGGACGCAGGTTCTCGATTGTACCGAGCAATGTGACCCTTGCTTTCATTTTGATCGGCGCG TAACAAAATTGTCGCGGAGTGAGGACAGCCTGAGGCTGAACATATTCAGCAAAACGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL BM580213             [            ccgCACAGCATTATCGCCCAAACCGCGGCCTACTGCACAACCACAACTCACGAACCACTTGTCATCTAGAAATCTTCCAACAGAGGTGGTTCA GTTTACTTCTTGCACGGTTCGGGTTGTGATTGTACCAGAGCAGTTGGTGCTGTGTTGTGTCCCTTTTTTGTTCGTCTAATATTTTA GAGCTTTGAAAATCCAAATCATATCAAGCTGCAATGGCCAACAGCGAGCTGATTGTTAGCACCGGCTACGGACCGGT TCAGGGCACAG CCCGGACATCGCTCTACGGGACTGGGTACGTCAGCTTCCA GGGCATCCCGTACGCGAAACCTCCGGTCGGGGAGCTACGTTTTAAGGATCCCACGCCACCTGAAAGCTGGACGCAGGTTCTCGATTGTACTGAGCAATGTGACCCTTGCTTTCATTTTGATCGGCGCGTTAACAAAATTGTCG GCAGTGAGGACAGCCTGAAGCTGAACATATTCAGCAAAACGATTAAACCCACGAAACCTCTGCCCGTCATGGTGTACATCTACGGCGGTGGATTCGTCGAAGGCACCAGCGGAACC GAACT GTACGGTCCGGACTATCTGATCGAAAAAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL BX602603             [                                           ACTGCACAACCACAACTCACGAACCACTTGTCATCTAGAAATCTTCCAACAGAGGTGGTTCA GTTTACTTCTTGCACGGTTCGGGTTGTGATTGTATCAGAGCAGTTGGTGCTGTGTTGTGTCCCTTTTTTGTTCGTCTGATATTTTA GAGCTTTGAAAATTCAAATCATATCAAGCTGCAATGGCCAACAGCGAGCTGATTGTTAGCACCGGCTACGGACCGGT TCAGGGCACAG CCAGGACATCGCTCTACGGGACTGGGTACGTCAGCTTCCA GGGCATCCCGTACGCGAAACCTCCGGTCGGAGAGCTACGTTTTAAGGATCCCACGCCACCTGAAAACTGGACGCAGGTTTTCGATTGTACCGAGCAATGTGACCCTTGCTTTCATTTTGATCGGCGCGTTAACAAAATTGTCG GGAGTGAGGACAGCCTGAGGCTGAACATATTCAGCAAAACGATTAAACCCACCAAACCTCTGCCCGTCATGGTGTACATCTACGGCGGTGGATTCGTCGAAGGTACCAGCGGAACC GAACT GTACGGTCCGGACTATCTGATCGAAAAAGACATCGTGCTGGTAACGCTTAACTATCGCGTCGG AGCACTCGGTTTCCTCTGCTGCCAATCA CCCACGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL BM615598             [                                                    CCGCAACTCTCGAACCACTTGTCATCTAGAAATCTTCCAACAGAGGTGGTTCA GTTTACTTCTTGCACGGTTCGGGTTGTGATTGTACCAGAGCAGTTGGTGCTGTGTTGTGTCCCTTTTTTGTTCGTCTGATATTTTA GAGCTTTGAAAATCCAAATCATATCAAGCTGCAATGGCCAACAGCGAGCTGATTGTTAGCACCGGCTACGGACCGGT TCAGGGCACAG CCCGGACATCGCTCTACGGGACTGGGTACGTCAGCTTCCA GGGCATCCCGTACGCGAAACCTCCGGTCGGGGAGCTACGTTTTAAGGATCCCACGCCACCTGAAAACTGGATGCAGGTTCTCGATTGTACAGAGCAATGTGACCCTTGCTTTCATTTTGATCGGCGCGTTAACAAAATTGTCG GCAGTGAGGACAGCCTGAAGCTAAACATATTCAGCAAAACGATTAAACCCACCAAACCTCTGCCCGTCATGGTGTACATCTACGGCGGTGGATTCGTCGAAGGTACCAGCGGAACCGGAACTGGTACGGTCCGGACTATCTGATCGAAAAAGACATCGTGCTGGTAACGCTTAACTATCGCGTCGGAAGCACTCGGTTTCCTCTGCTGCCAATCACCCCACGGCCGGTGTCCCGGGGCAATGCGGGCCTGAAAGACCAAAGGCTGGCGCTCCCAATGGGTGCGGGAACAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL AGA282637            [                                                         ACTCACGAACCACTTGTCATCTAGAAATCTTCCAACAGAGGTGGTTCA GTTTACTTCTTGCACGGTTCGGGTTGTGATTGTATCAGAGCAGTTGGTGCTGTGTTGTGTCCCTTTTTTGTTCGTCTGATATTTTA GAGCTTTGAAAATTCAAATCATATCAAGCTGCAATGGCCAACAGCGAGCTGATTGTTAGCACCGGCTACGGACCGGT TCAGGGCACAG CCAGGACATCGCTCTACGGGACTGGGTACGTCAGCTTCCA GGGCATCCCGTACGCGAAACCTCCGGTCGGAGAGCTACGTTTTAAGGATTCCACGCCAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CNS08LB0             [                                                                                                                                  TGTGATTGTACCAGAGCAGTTGGTGCTGTGTTGTGTCCCTTTTTTGTTCGTCTGAAATATAAGGAGCTTTGAAAATCCAAATCATATCAAGCTGCAATGGCCAACAGCGAGCTGATTGTTAGCACCGGCTACGGACCGGTCCCAGGGCACAGCCCGGGACATCGCTCTACGGGACTGGGTACGTCAGCTTCCA GGGCATCCCGTACGCGAAACCTCCGGTCGGGGAGCTACGTTTTAAGGATCCCACGCCACCTGAAAACTGGACGCAGGTTCTCGATTGTACCCCGCAATGCGACCCTTGCTTTCATTTTGATCGGCGCGTTAACAAAATTGTCG GCAGTGAGGACAGCCTGAAGCTGAACATATTCAGCAAAACGATTAAACCCACCAAACCTCTGCCCGTCATGGTGTACATCTACGGCGGTGGATTCGTCGAAGGCACCAGCGGAACC GAACT GTACGGTCCGGACTATCTGATCGAAAAAGACATCGTGCTGGTAACGCTTAACTATCGCGTCGG AGCACTCGGTTTCCTCTGCTGCCATTCA CCCACGGCCGGTGTCCC GGGCAATGCGGGTCTGAAAGACAAAAGGCTGGCGCT CCAATGGGTGCGGG ACAACATTGCGTCCTTTGGCGGCGATCCCAGCGCGAACACCAAAAAAAAACACAGCGCCGGGGGAGCGTCGGTACAGTATCACACGATTGCGGGCGCGTCGAAAAATTTGTTCCAGCGTGCCATC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL BM575850             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             CCGGCGGAACC GAACT GTACGGTCCGGACTATCTGATCGAAAAAGACATCGTGCTGGTAACGCTTAACTATCGCGTCGG AGCACTCGGTTTCCTCTGCTGCCAATCA CCCACGGCAGGTGTCCC GGGCAATGCGGGCCTGAAAGACCAAAGGCTGGCGCT CCGATGGGTGCGGG ACAACATTGCGTCCTTCGGAGGCGATCCCAGCGCGATCACCCTGTTTGGACACAGCGCCGGGGGAGCGTCGGTACAGTATCACACGATTGCGGACGCGTCGAAGAATTTGTTCCAGCGTGCCATCATCATGTCGGGCAGCACGATGTGCAGCTGGGCCCTTACACCCCAGCGCAACTGGCCGGAAAAACTGGCCAAAGCCATCGGTTGGCAGGGCGAGGGTGATGAGGAGGCGGCGCTGCAATATTTGCGCCAAGCTTCGCCGGAAAGCATTGTGGATCATCAGGAGAAATTGTTCGGACCGCAGGAAATACAAGAAGGCCTGCTTTCTCCATTCGCGCCAACGATCGAACCGTACGAGAGTGAGGTATGTTTCATCCCACGATCGCCGTTCGAGATGTCCCGCACTGCGTGGGGAAATTCCATCGACATCATGATCGGCGGAACCTCCGAAGAGGGCCTGATACTGCTGCCGAAAGTGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL BM589675             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ccgGGCAGGGCGAGGGTGATGAGGAGGCGGCGCTGCAATATTTGCGCCAAGCTTCGCCGGAAAGCATTGTGGATCATCAGGAGAAATTGTTCGGACCGCAGGAAATACAAGAAGGCCTGCTTTCTCCATTCGCGCCAACGATCGAACCGTACGAGAGTGAGGTATGTTTCATCCCACGATCGCCGTTCGAGATGTCCCGCACTGCGTGGGGAAATTCCATCGACATCATGATCGGCGGAACCTCCGAAGAGGGCCTGATACTGCTGCCGAAAGTGAAACCACAGCTTCCAAGCATGCTGCAGGATCCGCGACTGTTTGTAGGCAATGTTCCCTTCCATCTCAAGCTTAGCCTAGAACAGCGGATGGCTTTCGGGGAGCAGCTGAAGCAACTCTACTATCCCGATTCTAACCCCTCGATCGACAACCTGG A TGGATTCGTGAACATGGCCTCGGATCGCATCTT TTGGCACGAT CTGCATCGTACCATA CTGGCACGGGCCAACTACGCCTGCACTGCCAAAACGTTCGTTTATCGCTTCTGCTTTGATTCTCCGTTCTTTAACCACTATCGTATCCACATGGTCGACCCGAACGCACGTGGGACGTCTTCATGCGGATGAAA                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CNS08LB1             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CGGACCCCCCGAAGGGGGCCTGAAACTGCTGCCGAAAGTGAAACCATTTTTTTTAAGCATGCTGCAGGATCCGCGACTGTTCGTAGGCAATGTTCCCTTCCATCTCAAGCTTAGCCTAGAGCAGCGTATGGCTTTCGGAGAGCAGCTGAAGCAACTCTACTATCCCGATTCTAACCCCTCGATCGACAACCTGG A TGGATTCGTGAACATGGCCTCGGATCGCATCTT TTGGCACGAT CTGCATCGTACCAAA CTGGCACGAGCGAACTACGCCAGAACTGCCAAAACGTTCGTGTATCGCTTCTGCGTGGATTCTCCGTTCTTTAACCACTATCGTATCCACATGGTCGACCCGAACGCACGTGGGACGTC TCATGCGGATGAAATTTCTTACCTGTTTTCGAACATCTTCGCGAAACCACTGGGGGAGAGCACGCTCGAGTACCGTGCCATCCAGCACTTGGTGGATATCTTCACCAGCTTTGCCACCAACAGCGATCCCAACTGTGATAGCACCGCCAGTCTGTCATGGACGGCCGTCCCGAAAACGGCACCGCCGTACAATTGCCTGAACATCTCCAACGATGGTGTGGAGGTCGTGGGGCTGCCGGAATCAAGACGTCTGCAGCTGTGGGATTCGTTCTACGTAAATGATGCACTCTTCTAGACAGTACGATTTTATTCGACGAAATTTTGAACAATAATAA                                        ]
[+] EMBL AGA284790            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 CCGAAGAGGGCCTGATACTGCTGCCGAAAGTGAAACCACAGCTTCCAAGCATGCTGCAGGATCCGCGACTGTTTGTAGGCAATGTTCCCTTCCATCTCAAGCTTAGCCTAGAGCAGCGTATGGCTTTCGGGGAGCAGCTGAAGCAACTCTACTATCCAGATTCCAACCCCTCGATCGACAACCTGG A TGGATTCGTTAACATGGCCTCGGATCGCATCTT TTGGCACGAT CTGCATCGTACCATA CTGGCACGGGCCAACTACGCCGGCACTGCCAAAACGTTCGTGTATCGCTTCTGCGTTGATTCTCCGTTCTTTAACCACTATCGTATCCACATGGTCGACCCGAACGCACGTGGGACGTC TCATGCGGATTAAATTTCTTACCTATTTTCAGACATCTTCGC                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL BX466813             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ATTCCAACCCCTCGATNGACAACCTGGCANCGGATTCGTGAACATGGCCTCGGATCGCATCTTCTTGGCACGATCCTGCATCGTACCATACCTGGCACGGGCCAACTACGCCTGCACTGCCAAAACGTTCGTGTATCGCTTCTGCGTTGATTCTCCGTTCTTTAACCACTATCGTATCCACATGGTCGACCCGAACGCACGTGGGACGTC TCATGCGGATGAAATTTCTTACCTGTTTTCAAACATCTTCGCGAAACCGCTGGACAAGAGCACGCTCGAGTACCGTGCCATCCAGCACTTGGTCGATATCTTCACCAGTTTTGCCACCAACAGCGATCCCAACTGTGATAGCACCGCCAGTCTGTCGTGGACGGCCGTCCCGAAAACGGCACCGCCGTACAATTGCCTGAACATCTCCAACGATGGTGTGGAGGTTGTGGAGCTGCCGGAATCAAGACGTCTGCAGCTGTGGGATTCGTTCTACGTAAATGATGCACTCTTCTAGACAGTACGATATTATTCGACGAAATTTTGAACAACAATAAATTCTATATGAATCGTGTGAAAAAATACACAAAAAGNCAG]
[-] EMBL AGA281008            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CCACTATCGTATCCACATGGTCGACCCGAACGCACGTGGGACGTC TCATGCGGATGAAATTTCTTACCTATTTTCAAACATCTTCGCGAAACCCCTGGACAAGAGCACGCTCGAGTACCGTGCCATCCAGCACTTGGTCGATATCTTCACCAGTTTTGCCACCAACAGCGATCCCAACTGTGATAGCACCGCCAGTCTGTCGTGGACGGCCGTCCCGAAAACGGCACCGCCGTACAATTGCCTGAACATCTCCAACGATGGTGTGGAGGTTGTGGAGCTGCCGGAATCAAGACGTCTGCAGCTGTGGGATTCGTTCTACGTAAATGATGCACTCTTCTAGACATTACGATATTATTCGACGAAATTTTGAACAACAATAAATTCTTTATGTATCGTGTGCAAAAAAAA            ]
[-] EMBL AGA283495            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ATCCACATGGTCGACCCGAACGCACGTGGGACGTC TCATGCGGATGAAATTTCTTACCTATTTTCAAACATCTTCGCGAAACCCCTGGACAAGAGCACGCTCGAGTACCGTGCCATCCAGCACTTGGTCGATATCTTCACCAGTTTTGCCACCAACAGCGATCCCAACTGTGATAGCACCGCCAGTCTGTCGTGGACGGCCGTCCCGAAAACGGCACCGCCGTACAATTGCCTGAACATCTCCAACGATGGTGTGGAGGTTGTGGAGCTGCCGGAATCAAGACGTCTGCAGCTGTGGGATTCGTTCTACGTAAATGATGCACTCTTCTAGACATTACGATATTATTCGACGAAATTTTGAACAACAATAAATTCTTTATGTATCGTGTGCAAAAAAAA            ]




>consensus_9097#0
AATCCCGAGGTTATACACAGCATTATCGCCCAAACCGCGGCTACTGCACAACCACAACTC
ACGAACCACTTGTCATCTAGAAATCTTCCAACAGAGGTGGTTCAGTTTACTTCTTGCACG
GTTCGGGTTGTGATTGTATCAGAGCAGTTGGTGCTGTGTTGTGTCCCTTTTTTGTTCGTC
TGATATTTTAGAGCTTTGAAAATTCAAATCATATCAAGCTGCAATGGCCAACAGCGAGCT
GATTGTTAGCACCGGCTACGGACCGGTTCAGGGCACAGCCAGGACATCGCTCTACGGGAC
TGGGTACGTCAGCTTCCAGGGCATCCCGTACGCGAAACCTCCGGTCGGAGAGCTACGTTT
TAAGGATCCCACGCCACCTGAAAACTGGACGCAGGTTCTCGATTGTACCGAGCAATGTGA
CCCTTGCTTTCATTTTGATCGGCGCGTTAACAAAATTGTCGGCAGTGAGGACAGCCTGAA
GCTGAACATATTCAGCAAAACGATTAAACCCACCAAACCTCTGCCCGTCATGGTGTACAT
CTACGGCGGTGGATTCGTCGAAGGCACCAGCGGAACCGAACTGTACGGTCCGGACTATCT
GATCGAAAAAGACATCGTGCTGGTAACGCTTAACTATCGCGTCGGAGCACTCGGTTTCCT
CTGCTGCCAATCACCCACGGCCGGTGTCCCGGGCAATGCGGGCCTGAAAGACCAAAGGCT
GGCGCTCCAATGGGTGCGGGACAACATTGCGTCCTTTGGCGGCGATCCCAGCGCGAACAC
CAAAAAAAAACACAGCGCCGGGGGAGCGTCGGTACAGTATCACACGATTGCGGGCGCGTC
GAAAAATTTGTTCCAGCGTGCCATCATCATGTCGGGCAGCACGATGTGCAGCTGGGCCCT
TACACCCCAGCGCAACTGGCCGGAAAAACTGGCCAAAGCCATCGGTTGGCAGGGCGAGGG
TGATGAGGAGGCGGCGCTGCAATATTTGCGCCAAGCTTCGCCGGAAAGCATTGTGGATCA
TCAGGAGAAATTGTTCGGACCGCAGGAAATACAAGAAGGCCTGCTTTCTCCATTCGCGCC
AACGATCGAACCGTACGAGAGTGAGGTATGTTTCATCCCACGATCGCCGTTCGAGATGTC
CCGCACTGCGTGGGGAAATTCCATCGACATCATGATCGGCGGAACCTCCGAAGAGGGCCT
GATACTGCTGCCGAAAGTGAAACCACAGCTTCCAAGCATGCTGCAGGATCCGCGACTGTT
TGTAGGCAATGTTCCCTTCCATCTCAAGCTTAGCCTAGAGCAGCGTATGGCTTTCGGGGA
GCAGCTGAAGCAACTCTACTATCCCGATTCTAACCCCTCGATCGACAACCTGGATGGATT
CGTGAACATGGCCTCGGATCGCATCTTTTGGCACGATCTGCATCGTACCATACTGGCACG
GGCCAACTACGCCTGCACTGCCAAAACGTTCGTGTATCGCTTCTGCGTTGATTCTCCGTT
CTTTAACCACTATCGTATCCACATGGTCGACCCGAACGCACGTGGGACGTCTCATGCGGA
TGAAATTTCTTACCTATTTTCAAACATCTTCGCGAAACCCCTGGACAAGAGCACGCTCGA
GTACCGTGCCATCCAGCACTTGGTCGATATCTTCACCAGTTTTGCCACCAACAGCGATCC
CAACTGTGATAGCACCGCCAGTCTGTCGTGGACGGCCGTCCCGAAAACGGCACCGCCGTA
CAATTGCCTGAACATCTCCAACGATGGTGTGGAGGTTGTGGAGCTGCCGGAATCAAGACG
TCTGCAGCTGTGGGATTCGTTCTACGTAAATGATGCACTCTTCTAGACAGTACGATATTA
TTCGACGAAATTTTGAACAACAATAAATTCTTTATGTATCGTGTGCAAAAAAAAACAAAA
AGNCAG

consensusID : consensus_9097#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 449
fasta sequence

                              [GGCAGAATCCGAGGTTATATAGGAGAAATTGTTCGGACGCAGGAAATACAAGAAGGCTGCTTTCTCCATTCGCGCCAACGATCGAACCGTACGAGAGTGAGGTATGTTTCATCCCACGATCGCCGTTCGAGATGTCCCGCACTGCGTGGGGAAATTCCATCGACATCATGATCGGCGGAACCTCCGAAGAGGGGCTGATACTGCTGCCGAAAGTGAAACCACAGCTTCCAAGCATGCTGCAGGATCCGCGACTGTTTCGTAGGCACACTGTTCCCTTCCATCTCAAGCTTAGCCTAGAGCAGCGTATGGCTTCTCGGGGAGCAGCTGAAGCAACTCTACTATCCAGATTCCAACCCTCGATCGACAACCCTGGGATGGATTCGTGAACATGGCGCTCGGATCGCATCTTTTTGGGCACGAATCTGCGCATTCGTACCCCATACTGGGCA]

[+] EMBL AL694368             [GGCAGAATCCGAGGTTATATAGGAGAAATTGTTCGGACGCAGGAAATACAAGAAGGCTGCTTTCTCCATTCGCGCCAACGATCGAACCGTACGAGAGTGAGGTATGTTTCATCCCACGATCGCCGTTCGAGATGTCCCGCACTGCGTGGGGAAATTCCATCGACATCATGATCGGCGGAACCTCCGAAGAGGGGCTGATACTGCTGCCGAAAGTGAAACCACAGCTTCCAAGCATGCTGCAGGATCCGCGACTGTTTCGTAGGCACACTGTTCCCTTCCATCTCAAGCTTAGCCTAGAGCAGCGTATGGCTTCTCGGGGAGCAGCTGAAGCAACTCTACTATCCAGATTCCAACCCTCGATCGACAACCCTGGGATGGATTCGTGAACATGGCGCTCGGATCGCATCTTTTTGGGCACGAATCTGCGCATTCGTACCCCATACTGGGCA]




>consensus_9097#1
GGCAGAATCCGAGGTTATATAGGAGAAATTGTTCGGACGCAGGAAATACAAGAAGGCTGC
TTTCTCCATTCGCGCCAACGATCGAACCGTACGAGAGTGAGGTATGTTTCATCCCACGAT
CGCCGTTCGAGATGTCCCGCACTGCGTGGGGAAATTCCATCGACATCATGATCGGCGGAA
CCTCCGAAGAGGGGCTGATACTGCTGCCGAAAGTGAAACCACAGCTTCCAAGCATGCTGC
AGGATCCGCGACTGTTTCGTAGGCACACTGTTCCCTTCCATCTCAAGCTTAGCCTAGAGC
AGCGTATGGCTTCTCGGGGAGCAGCTGAAGCAACTCTACTATCCAGATTCCAACCCTCGA
TCGACAACCCTGGGATGGATTCGTGAACATGGCGCTCGGATCGCATCTTTTTGGGCACGA
ATCTGCGCATTCGTACCCCATACTGGGCA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9097#0      AATCCCGAGGTTATACACAGCATTATCGCCCAAACCGCGGCTACTGCACAACCACAACTC 60
consensus_9097#1      ------------------------------------------------------------
                                                                                  

consensus_9097#0      ACGAACCACTTGTCATCTAGAAATCTTCCAACAGAGGTGGTTCAGTTTACTTCTTGCACG 120
consensus_9097#1      ------------------------------------------------------------
                                                                                  

consensus_9097#0      GTTCGGGTTGTGATTGTATCAGAGCAGTTGGTGCTGTGTTGTGTCCCTTTTTTGTTCGTC 180
consensus_9097#1      ------------------------------------------------------------
                                                                                  

consensus_9097#0      TGATATTTTAGAGCTTTGAAAATTCAAATCATATCAAGCTGCAATGGCCAACAGCGAGCT 240
consensus_9097#1      ------------------------------------------------------------
                                                                                  

consensus_9097#0      GATTGTTAGCACCGGCTACGGACCGGTTCAGGGCACAGCCAGGACATCGCTCTACGGGAC 300
consensus_9097#1      ------------------------------------------------------------
                                                                                  

consensus_9097#0      TGGGTACGTCAGCTTCCAGGGCATCCCGTACGCGAAACCTCCGGTCGGAGAGCTACGTTT 360
consensus_9097#1      ------------------------------------------------------------
                                                                                  

consensus_9097#0      TAAGGATCCCACGCCACCTGAAAACTGGACGCAGGTTCTCGATTGTACCGAGCAATGTGA 420
consensus_9097#1      ------------------------------------------------------------
                                                                                  

consensus_9097#0      CCCTTGCTTTCATTTTGATCGGCGCGTTAACAAAATTGTCGGCAGTGAGGACAGCCTGAA 480
consensus_9097#1      ------------------------------------------------------------
                                                                                  

consensus_9097#0      GCTGAACATATTCAGCAAAACGATTAAACCCACCAAACCTCTGCCCGTCATGGTGTACAT 540
consensus_9097#1      ------------------------------------------------------------
                                                                                  

consensus_9097#0      CTACGGCGGTGGATTCGTCGAAGGCACCAGCGGAACCGAACTGTACGGTCCGGACTATCT 600
consensus_9097#1      ------------------------------------------------------------
                                                                                  

consensus_9097#0      GATCGAAAAAGACATCGTGCTGGTAACGCTTAACTATCGCGTCGGAGCACTCGGTTTCCT 660
consensus_9097#1      ------------------------------------------------------------
                                                                                  

consensus_9097#0      CTGCTGCCAATCACCCACGGCCGGTGTCCCGGGCAATGCGGGCCTGAAAGACCAAAGGCT 720
consensus_9097#1      ------------------------------------------------------------
                                                                                  

consensus_9097#0      GGCGCTCCAATGGGTGCGGGACAACATTGCGTCCTTTGGCGGCGATCCCAGCGCGAACAC 780
consensus_9097#1      ------------------------------------------------------------
                                                                                  

consensus_9097#0      CAAAAAAAAACACAGCGCCGGGGGAGCGTCGGTACAGTATCACACGATTGCGGGCGCGTC 840
consensus_9097#1      ------------------------------------------------------------
                                                                                  

consensus_9097#0      GAAAAATTTGTTCCAGCGTGCCATCATCATGTCGGGCAGCACGATGTGCAGCTGGGCCCT 900
consensus_9097#1      ------------------------------------------------------------
                                                                                  

consensus_9097#0      TACACCCCAGCGCAACTGGCCGGAAAAACTGGCCAAAGCCATCGGTTGGCAGGGCGAGGG 960
consensus_9097#1      ------------------------------------------------------------
                                                                                  

consensus_9097#0      TGATGAGGAGGCGGCGCTGCAATATTTGCGCCAAGCTTCGCCGGAAAGCATTGTGGATCA 1020
consensus_9097#1      -------------------------------------------GGCAGAATCCGAGGTTA 17
                                                                 *  ** **    * * *

consensus_9097#0      T-CAGGAGAAATTGTTCGGACCGCAGGAAATACAAGAAGGCCTGCTTTCTCCATTCGCGC 1079
consensus_9097#1      TATAGGAGAAATTGTTCGGAC-GCAGGAAATACAAGAAGGC-TGCTTTCTCCATTCGCGC 75
                      *  ****************** ******************* ******************

consensus_9097#0      CAACGATCGAACCGTACGAGAGTGAGGTATGTTTCATCCCACGATCGCCGTTCGAGATGT 1139
consensus_9097#1      CAACGATCGAACCGTACGAGAGTGAGGTATGTTTCATCCCACGATCGCCGTTCGAGATGT 135
                      ************************************************************

consensus_9097#0      CCCGCACTGCGTGGGGAAATTCCATCGACATCATGATCGGCGGAACCTCCGAAGAGGGCC 1199
consensus_9097#1      CCCGCACTGCGTGGGGAAATTCCATCGACATCATGATCGGCGGAACCTCCGAAGAGGGGC 195
                      ********************************************************** *

consensus_9097#0      TGATACTGCTGCCGAAAGTGAAACCACAGCTTCCAAGCATGCTGCAGGATCCGCGACTGT 1259
consensus_9097#1      TGATACTGCTGCCGAAAGTGAAACCACAGCTTCCAAGCATGCTGCAGGATCCGCGACTGT 255
                      ************************************************************

consensus_9097#0      TT-GTAGGCAA--TGTTCCCTTCCATCTCAAGCTTAGCCTAGAGCAGCGTATGGCTT-TC 1315
consensus_9097#1      TTCGTAGGCACACTGTTCCCTTCCATCTCAAGCTTAGCCTAGAGCAGCGTATGGCTTCTC 315
                      ** *******   ******************************************** **

consensus_9097#0      GGGGAGCAGCTGAAGCAACTCTACTATCCCGATTCTAACCCCTCGATCGACAACCT--GG 1373
consensus_9097#1      GGGGAGCAGCTGAAGCAACTCTACTATCCAGATTCCAACCC-TCGATCGACAACCCTGGG 374
                      ***************************** ***** ***** *************   **

consensus_9097#0      ATGGATTCGTGAACATGGC-CTCGGATCGCATCTTTT--GGCACGA-TCTGCATCGTACC 1429
consensus_9097#1      ATGGATTCGTGAACATGGCGCTCGGATCGCATCTTTTTGGGCACGAATCTGCG-CATTCG 433
                      ******************* *****************  ******* *****  * * * 

consensus_9097#0      ATACTGGCACGGGCCAACTACGCCTGCACTGCCAAAACGTTCGTGTATCGCTTCTGCGTT 1489
consensus_9097#1      TACCCCATACTGGGCA-------------------------------------------- 449
                         *    ** ** **                                            

consensus_9097#0      GATTCTCCGTTCTTTAACCACTATCGTATCCACATGGTCGACCCGAACGCACGTGGGACG 1549
consensus_9097#1      ------------------------------------------------------------
                                                                                  

consensus_9097#0      TCTCATGCGGATGAAATTTCTTACCTATTTTCAAACATCTTCGCGAAACCCCTGGACAAG 1609
consensus_9097#1      ------------------------------------------------------------
                                                                                  

consensus_9097#0      AGCACGCTCGAGTACCGTGCCATCCAGCACTTGGTCGATATCTTCACCAGTTTTGCCACC 1669
consensus_9097#1      ------------------------------------------------------------
                                                                                  

consensus_9097#0      AACAGCGATCCCAACTGTGATAGCACCGCCAGTCTGTCGTGGACGGCCGTCCCGAAAACG 1729
consensus_9097#1      ------------------------------------------------------------
                                                                                  

consensus_9097#0      GCACCGCCGTACAATTGCCTGAACATCTCCAACGATGGTGTGGAGGTTGTGGAGCTGCCG 1789
consensus_9097#1      ------------------------------------------------------------
                                                                                  

consensus_9097#0      GAATCAAGACGTCTGCAGCTGTGGGATTCGTTCTACGTAAATGATGCACTCTTCTAGACA 1849
consensus_9097#1      ------------------------------------------------------------
                                                                                  

consensus_9097#0      GTACGATATTATTCGACGAAATTTTGAACAACAATAAATTCTTTATGTATCGTGTGCAAA 1909
consensus_9097#1      ------------------------------------------------------------
                                                                                  

consensus_9097#0      AAAAAACAAAAAGNCAG 1926
consensus_9097#1      -----------------