cluster # 9103

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Anopheles gambiae
cluster # 9103 cluster # 9103 Sequences # 14 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9103#0 length = 847 sequences # 5

consensus_9103#1 length = 803 sequences # 8
consensus_9103#2 length = 658 sequences # 1

consensusID : consensus_9103#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 847
fasta sequence

                              [CCGCCCACGCGTCCGGGTGTGTGCTTTACGTAGCGAAGCGTTTCGCTTTTCGGTGTGTGTTTTAGCGTAGA-CCGTCTCGGCGTCGCTAACCCATCAGTGTGGCAAAGCTGCATCAGAAGTTAGCGTTTTGGAGTGTGTGTATAGCTGAAAAAATATATAAACAATCTTGAATACAAAGAGCTTCACTCCCGTGCGGGCTAGCTGTGGCAAAGCGGAAGGGTAAGAGTTTCCGTCACGGATCGTAGCATCCCGGCAGGGCGGTGTACGGGTGCGTCTTCCGGTCCACGGACTGTCGATTTCGTTATTACACCGGAACCTCCGCTCCGGCA-AGGGCAACAGCAGCAGCAGCGTCAATCAAATCTTCCACTGCGACTTCCGCACGCCATCAATTGAAACTTATCCGCACCACCAGGCGGCACAACTCCATTGCGGAAGGTGCTGAACCGAGTTCCGGACCGCACGATGGAACTCTCTCGGATAAAAACCCTTTACTGTGGGTTAATATTTCAGCTGCTCTTCACACTAGCCCTACCGCTGCCCTACAC-AAAGTATGGACGTACCTGCGGCGATATCGGTTGCCTGTCTAGCCAGGTGTGCGTGATGGCGTACGAATCCTGCTCGATCGGGCAACGCGAGGGTAACG-ATTGTGGCCGTTACCCGACCTGCAAAAAGAACACGGATCCGAGCGTCAGTGCCGGCCCGAGCGAGGGAGTTAGCAATGTGTACAACAACGGTCCGAAGCCTTCCGCACCGGCCGGTCGCCCTGGAGACGACGATGTGCTCGGCACACTCGGTTTGAATCCTAACAATCCGTACGGCCAGCGCCCAACGCCACCACCGGCCCGAC]

[+] EMBL BM650272             [CCGCCCACGCGTCCGGGTGTGTGCTTTACGTAGCGAAGCGTTTCGCTTTTCGGTGTGTGTTTTAGCGTAAACCCGTCTCAGCGTCGCTAACCCATCAGTGTGGCAAAGCTGCATCAGAAGTTAGCGTTTTGGAGTGTGTGTATAGCTGAAAAAATATATAAACAATCTTGAATACAAAGAGCTTCACTCCCGTGCGGGCCAGCTGTGGCAAAGCGGAAGGGCAAGAGTTTCCGTCACGGATCGTAGCATCCCGGCAGGGCGGTGTAC CGTGCGTCTTCCGGTCCACGGACTGTCGATTTCGTTATTACACCGGAACCTCCGCTCCGGCAGGGGGCAAAAGCAGCAGCAACGTCAATCAAATCTTCCACTGCGACTTCCGTACGCCATCAATTGAAACTTATCCACACAGCCAGGCGGCACAGCCCCATTGCGGAAGGTGCTGAACCGAGTTCCGGACCGCACGATGGAACTCTCGCGGATAAAAACCCTTTACTGTGGGTTAATATTTCAGCTGCTCTTCACACTAGCCCTACCGCTGCCCTACAC AAAGTATGGACGTACCTGCGGCGATATCGGTTGCCTGTCTAGCCAGGTGTGCGTGATGGCGTACGAATCCTGCTCGATCGGGCAACGCGAGGGTAACG ATTGTGGCCGTTACCCGACCTGCAA                                                                                                                                                                                   ]
[+] EMBL BM655492             [CCGCCCACGCGTCCG   GTGTGCTTTACGTAGCGAAGCGTTTCGCTTTTCGGTGTGTGTTTTAGCGTAGA CCGTCTCGGCGTCGCTAACCCATCAGTGTGGCAAAGCTGCATCAGAAGTTAGCGTTTTGGAGTGTGTGTATAGCTGAAAAAATATATAAACAATCTTGAATACAAAGAGCTTCACTCCCGTGCGGGCTAGCTGTGGCAAAGCGGAAGGGTAAGAGTTTCCGTCACGGATCGTAGCATCCCGGCAGGGCGGTGTACGGGTGCGTCTTCCGGTCCACGGACTGTCGATTTCGTTATTACACCGGAACCTCCGCTCCGGCA AGGGCAACAGCAGCAGCAGCGTCAATCAAATCTTCCACTGCGACTTCCGCACGCCATCAATTGAAACTTATCCGCACCACCAGGCGGCACAACTCCATTGCGGAAGGTGCTGAACCGAGTTCCGGACCGCACGATGGAACTCTCTCGGATAAAAACCCTTTACTGTGGGTTAATATTTCAGCTGCTCTTCACACTAGCCCTACCGCTGCCCTACAC AAAGTATGGACGTACCTGCGGCGATATCGGTTGCCTGTCTAGCCAGGTGTGCGTGATGGCGTACGAATCCTGCTCGATCGGGCAACGCGAGGGTAACGAATTGTGGCCGTTACCCG                                                                                                                                                                                           ]
[+] EMBL BM648373             [cgaCCCACGCGTCCGGGTGTGTGCTTTACGTAGCGAAGCGTTTCGCTTTTCGGTGTGTGTTTTAGCGTAGA CCGTCTCGGCGTCGCTAACCCATCAGTGTGGCAAAGCTGCATCAGAAGTTAGCGTTTTGGAGTGTGTGTATAGCTGAAAAAATATATAAACAATCTTGAATACAAAGAGCTTCACTCCCGTGCGGGCTAGCTGTGGCAAAGCGGAAGGGTAAGAGTTTCCGTCACGGATCGTAGCATCCCGGCAGGGCGGTGTACGGGTGCGTCTTCCGGTCCACGGACTGTCGATTTCGTTATTACACCGGAACCTCCGCTCCGGCA AGGGCAACAGCAGCAGCAGCGTCAATCAAATCTTCCACTGCGACTTCCGCACGCCATCAATTGAAACTTATCCGCACCACCAGGCGGCACAACTCCATTGCGGAAGGTGCTGAACCGAGTTCCGGACCGCACGATGGAACTCTCTCGGATAAAAACCCTTTACTGTGGGTTAATATTTCAGCTGCTCTTCACACTAGCCCTACCGCTGCCCTACAC AAAGTATGGACGTACCTGCGGCGATATCGGTTGCCTGTCTAGCCAGGTGTGCGTGATGGCGTACGAATCCTGCTCGATCGGGC                                                                                                                                                                                                                            ]
[+] EMBL BM598067             [                                                               ccgGTAGA CCGTCTCGGCGTCGCTAACCCATCAGTGTGGCAAAGCTGCATCAGAAGTTAGCGTTTTGGAGTGTGTGTATAGCTGAAAAAATATATAAACAATCTTGAATACAAAGAGCTTCACTCCCGTGCGGGCTAGCTGTGGCAAAGCGGAAGGGTAAGAGTTTCCGTCACGGATCGTAGCATCCCGGCAGGGCGGTGTACGGGTGCGTCTTCCGGTCCACGGACTGTCGATTTCGTTATTACACCGGAACCTCCGCTCCGGCA AGGGCAACAGCAGCAGCAGCGTCAATCAAATCTTCCACTGCGACTTCCGCACGCCATCAATTGAAACTTATCCGCACCACCAGGCGGCACAACTCCATTGCGGAAGGTGCTGAACCGAGTTCCGGACCGCACGATGGAACTCTCTCGGATAAAAACCCTTTACTGTGGGTTAATATTTCAGCTGCTCTTCACACTAGCCCTACCGCTGCCCTACACAAAAGTATGGACGTACCTGCGGCGATATCGGTTGCCTGTCTAGCCAGGTGTGCGTGATGGCGTACGAATCCTGCTCGATCGGGCAACGCGAGGGTAACG ATTGTGGCCGTTACCCGACCTGCAAAAAGAACACGGATCCGAGCGTCAGTGCCGGCCCGAGCGAGGGAGTTAGCAATGTG                                                                                                                            ]
[+] EMBL BX605213             [                                                                                                                                                                                                                      GGAAGGGCAAGAGTTTCCGTCACGAATCGTAGCATCCCGGCAGGGCGGTGTACGGGTGCGTCTTCCGGTCCACGGACTGTCGATTTCGTTATTACACCGGAACCTCCGCTCCGGCA AGGGCAACAGCAGCAGCAGCGTCAATCAAATCTTCCACTGCGACTTCCGCACGCCATCAATTGAAACTTATCCACACAGCCAGGCGACACAGCCCCATTGCGGAAGGTGCTGAACCGAGTTCCGGACCGCACGATGGAACTCTCTCGGATAAAAACCCTTTACTGTGGGTTAATATTTCAGCTGCTCTTCACACTAGCCCTACCGCTGCCCTACAC AAAGTATGGACGTACCTGCGGCGATATCGGTTGCCTGTCTAGCCAGGTGTGCGTGATGGCGTACGAATCCTGCTCGATCGGGCAACGCGAGGGTAACG ATTGTGGCCGTTACCCGACCTGCAAAAAGAACACGGATCCGAGCGTCAGTGCCGGCCCGAGCGAGGGAGTTAGCAATGTGTACAACAACGGTCCGAAGCCTTCCGCACCGGCCGGTCGCCCTGGAGACGACGATGTGCTCGGCACACTCGGTTTGAATCCTAACAATCCGTACGGCCAGCGCCCAACGCCACCACCGGCCCGAC]




>consensus_9103#0
CCGCCCACGCGTCCGGGTGTGTGCTTTACGTAGCGAAGCGTTTCGCTTTTCGGTGTGTGT
TTTAGCGTAGACCGTCTCGGCGTCGCTAACCCATCAGTGTGGCAAAGCTGCATCAGAAGT
TAGCGTTTTGGAGTGTGTGTATAGCTGAAAAAATATATAAACAATCTTGAATACAAAGAG
CTTCACTCCCGTGCGGGCTAGCTGTGGCAAAGCGGAAGGGTAAGAGTTTCCGTCACGGAT
CGTAGCATCCCGGCAGGGCGGTGTACGGGTGCGTCTTCCGGTCCACGGACTGTCGATTTC
GTTATTACACCGGAACCTCCGCTCCGGCAAGGGCAACAGCAGCAGCAGCGTCAATCAAAT
CTTCCACTGCGACTTCCGCACGCCATCAATTGAAACTTATCCGCACCACCAGGCGGCACA
ACTCCATTGCGGAAGGTGCTGAACCGAGTTCCGGACCGCACGATGGAACTCTCTCGGATA
AAAACCCTTTACTGTGGGTTAATATTTCAGCTGCTCTTCACACTAGCCCTACCGCTGCCC
TACACAAAGTATGGACGTACCTGCGGCGATATCGGTTGCCTGTCTAGCCAGGTGTGCGTG
ATGGCGTACGAATCCTGCTCGATCGGGCAACGCGAGGGTAACGATTGTGGCCGTTACCCG
ACCTGCAAAAAGAACACGGATCCGAGCGTCAGTGCCGGCCCGAGCGAGGGAGTTAGCAAT
GTGTACAACAACGGTCCGAAGCCTTCCGCACCGGCCGGTCGCCCTGGAGACGACGATGTG
CTCGGCACACTCGGTTTGAATCCTAACAATCCGTACGGCCAGCGCCCAACGCCACCACCG
GCCCGAC

consensusID : consensus_9103#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 803
fasta sequence

                              [CCCACGCGTCCGGTCCCGTACGGCCGTGTCTGTGAAGGTG---TGTGCTTTACGTAGCGAAGCGTTTCGCTTTTCGGTGTGTGTTTTAGCGTAGACCGTCTCGGCGTCGCTAACCCATCAGTGTGGCAAAGCTGCATCAGAAGTTAGCGTTTTGGAGTGTGTGTATAGCTGAAAAAATATATAAACAATCTTGAATACAAAGAGCTTCACTCCCGTGCGG--GCTAGCTGTGGCAAAGCGGAAGGGTAAGAGTTTCCGTCACGGATCGTAGCATCCCGGC--AGGGCG--GTGTACGG-GTGCGTCTTCCGGTCCACGGACTGTCGATTTCGTTATTACACCGGAACCTCCGCTCCGGCAAGGGCAACAGCAGCAGCAGCGTCAATCAAATCTTCCACTGCGACTTCCGCACGC-CATCAATTGAAACTTATCCGCACCACCAGGCGGCACAACTCCATTGCGGAAGGTGCTGAACCGAGTTCCGGACCGCACGATGGAACTCTCTCGGATAAAAACCCTTTACTGTGGGTTAATATTTCAGCTGCTCTTCACACTAGCCCTACCGCTGCCCTACAC-AAAGTATGGACGTACCTGCGGCGATATCGGTTGCCTGTCTAGCCAGGTGTGCGTGATGGCGTACGAATCCTGCTCGATCGGGCAACGCGAGGGTAACGATTGTGGCCGTTACCCGACCTGCAAAAAGAACAC-GGATCCGAGCGTCAGTGCAGGGCCGAGCGAGGGAGTTAGCAATGTGTACAACAACGGTCCGAAGCCTTCCGCACCGGCCGGTCGTCCCGTACGGCCGTGTCTGTG]

[+] EMBL BM589518             [CCCACGCGTCCGGTCCCGTACGGCCGTGTCTGTGAAGGTG   TGTGCTTTACGTAGCGAAGCGTTTCGCTTTTCGGTGTGTGTTTTAGCGTAGACCGTCTCGGCGTCGCTAACCCATCAGTGTGGCAAAGCTGCATCAGAAGTTAGCGTTTTGGAGTGTGTGTATAGCTGAAAAAATATATAAACAATCTTGAATACAAAGAGCTTCACTCCCGTGCGG  GCTAGCTGTGGCAAAGCGGAAGGGTAAGAGTTTCCGTCACGGATCGTAGCATCCCGGC  AGGGCG  GTGTACGG GTGCGTCTTCCGGTCCACGGACTGTCGATTTCGTTATTACACCGGAACCTCCGCTCCGGCAAGGGCAACAGCAGCAGCAGCGTCAATCAAATCTTCCACTGCGACTTCCGCACGC CATCAATTGAAACTTATCCGCACCACCAGGCGGCACAACTCCATTGCGGAAGGTGCTGAACCGAGTTCCGGACCGCACGATGGAACTCTCTCGGATAAAAACCCTTTACTGTGGGTTAATATTTCAGCTGCTCTTCACACTAGCCCTACCGCTGCCCTACAC AAAGTATGGACGTACCTGCGGCGATATCGGTTGCCTGTCTAGCCAGGTGTGCGTGATGGCGTACGAATCCTGCTCGAT                                                                                                                                                                ]
[+] EMBL BM649051             [              CCGGTACGGCCGTGTCTGTGAAGGTG   TGTGCTTTACGTAGCGAAGCGTTTCGCTTTTCGGTGTGTGTTTTAGCGTAGACCGTCTCGGCGTCGCTAACCCATCAGTGTGGCAAAGCTGCATCAGAAGTTAGCGTTTTGGAGTGTGTGTATAGCTGAAAAAATATATAAACAATCTTGAATACAAAGAGCTTCACTCCCGTGCGG  GCTAGCTGTGGCAAAGCGGAAGGGTAAGAGTTTCCGTCACGGATCGTAGCATCCCGGC  AGGGCG  GTGTACGG GTGCGTCTTCCGGTCCACGGACTGTCGATTTCGTTATTACACCGGAACCTCCGCTCCGGCAAGGGCAACAGCAGCAGCAGCGTCAATCAAATCTTCCACTGCGACTTCCGCACGC CATCAATTGAAACTTATCCGCACCACCAGGCGGCACAACTCCATTGCGGAAGGTGCTGAACCGAGTTCCGGACCGCACGATGGAACTCTCTCGGATAAAAACCCTTTACTGTGGGTTAATATTTCAGCTGCTCTTCACACTAGCCCTACCGCTGCCCTACAC AAAGTATGGACGTACCTGCGGCGATATCGGTTGCCTGTCTAGCCAGGTGTGCGTGATGGCGTACGAATCCTGCTCGATCGGGCAACGCGAGGGTAACGATTGTGGCCGTTACCCGACCTGCAAAAAGAACACGGGATCCG                                                                                                  ]
[+] EMBL BM596064             [              CCGGTACGGCCGTGTCTGTGAAGGTGTGTTGTGCTTTACGTAGCGAAGCGTTTCGCTGTTCGGTGTGTGTTTTAACGTAGACCGCCTCGGCGTCGCTAACCCATCA  GTGGCAAAGCTGCATCAAAGGTTAGCG TTTGGAGTGTGTGTATAGCTGAAAAAATATATAAACAATCTTGAATATAAAGAGCTTCACTCCCGTGCGGCAGCTAGCTGTGGCAAAGCGGAAGGGCAAGAGTTTCCGTCACGGATCGTAGCATCCCGGCGTAGGGCGGTGTGTACGGTGTACGTCTTCCGGTCCACGGACTGTCGATTTCGTTATTACACCGGAACCTCCGCTTCGGCAAGGGCAACAGCAGCAGCAGCGTCAATCAAAT      CTGCGACTTCCATACGCTCCCCCTTTGAAACTTATCCGCACAGCCAGGCGGCACAACTCCATTGCGGAAGGTGCTGAGCCGAGTTCCGGACCGCACGATGGAACTCTCTCGGATAAAAACCCTTTACTGTGGGTTAATATTTCAGCTGCTCTTCACACTAGTCCTACCGCTGCCCTACAC AAAGTATGGACGTACCTGCGGCGATATC                                                                                                                                                                                                                  ]
[+] EMBL BM607155             [           ccgCCCGTACGGCCGTGTCTGTGAAGGTG   TGTGCTTTACGTAGCGAAGCGTTTCGCTTTTCGGTGTGTGTTTTAGCGTAGACCGTCTCGGCGTCGCTAACCCATCAGTGTGGCAAAGCTGCATCAGAAGTTAGCGTTTTGGAGTGTGTGTATAGCTGAAAAAATATATAAACAATCTTGAATACAAAGAGCTTCACTCCCGTGCGG  GCTAGCTGTGGCAAAGCGGAAGGGTAAGAGTTTCCGTCACGGATCGTAGCATCCCGGC  AGGGCG  GTGTACGG GTGCGTCTTCCGGTCCACGGACTGTCGATTTCGTTATTACACCGGAACCTCCGCTCCGGCAAGGGCAACAGCAGCAGCAGCGTCAATCAAATCTTCCACTGCGACTTCCGCACGC CATCAATTGAAACTTATCCGCACCACCAGGCGGCACAACTCCATTGCGGAAGGTGCTGAACCGAGTTCCGGACCGCACGATGGAACTCTCTCGGATAAAAACCCTTT                                                                                                                                                                                                                                                                                                      ]
[+] EMBL BM578726             [                  ccgGGCCGTGTCTGTGAAGGTG   TGTGCTTTACGTAGCGAAGCGTTTCGCTTTTCGGTGTGTGTTTTAGCGTAGACCGTCTCGGCGTCGCTAACCCATCAGTGTGGCAAAGCTGCATCAGAAGTTAGCGTTTTGGAGTGTGTGTATAGCTGAAAAAATATATAAACAATCTTGAATACAAAGAGCTTCACTCCCGTGCGG  GCTAGCTGTGGCAAAGCGGAAGGGTAAGAGTTTCCGTCACGGATCGTAGCATCCCGGC  AGGGCG  GTGTACGG GTGCGTCTTCCGGTCCACGGACTGTCGATTTCGTTATTACACCGGAACCTCCGCTCCGGCAAGGGCAACAGCAGCAGCAGCGTCAATCAAATCTTCCACTGCGACTTCCGCACGC CATCAATTGAAACTTATCCGCACCACCAGGCGGCACAACTCCATTGCGGAAGGTGCTGAACCGAGTTCCGGACCGCACGATGGAACTCTCTCGGATAAAAACCCTTTACTGTGGGTTAATATTTCAGCTGCTCTTCACACTAGCCCTACCGCTGCCCTACACAAAAGTAT                                                                                                                                                                                                                                       ]
[+] EMBL BM638038             [                                  ccGGT    TGTGCTTTACGTAGCGAAGCGTTTCGCTGTTCGGTGTGTGTTTTAACGTAGACCGCCTCGGCGTCGCTAACCCATCA  GTGGCAAAGCTGCATCAAAGGTTAGCG TTTGGAGTGTGTGTATAGCTGAAAAAATATATAAACAATCTTGAATATAAAGAGCTTCACTCCCGTGCGGCAGCTAGCTGTGGCAAAGCGGAAGGGCAAGAGTTTCCGTCACGGATCGTAGCATCCCGGCGTAGGGCGGTGTGTACGGTGTACGTCTTCCGGTCCACGGACTGTCGATTTCGTTATTACACCGGAACCTCCGCTTCGGCAAGGGCAACAGCAGCAGCAGCGTCAATCAAAT      CTGCGACTTCCATACGCTCCCCCTTTGAAACTTATCCGCACAGCCAGGCGGCACAACTCCATTGCGGAAGGTGCTGAGCCGAGTTCCGGACCGCACGATGGAACTCTCTCGGATAAAAACCCTTTACTGTGGGTTAATATTTCAGCTGCTCTTCACACTAGTCCTACCGCTGCCCTACAC AAAGTATGGACGTACCTGCGGCGATATCGGTTGCCTGTCTAGCCAGGTGTGCGTGATGGCGTACGAATCCTGCTCGATTGGGCAACGCGAGGGTAACGATTGTGGCCGTTACCCGACCTGCAAAAAGAACAC GGATCCGAGCGTCAGTGCAGGGCCGAGCGAGGGAGTTAGCAAT                                                              ]
[+] EMBL BX627666             [                                                                                                            GCTAACCCATCA  GTGGCAAAGCTGCATCAAAGGTTAGCGTTTTGGAGTGTGTGTATTGCTGAAAAAATATATAAACAATCTTGAATATAAAGAGCTTCACTCCCGTGCGGCAGCTAGCTGTGGCAAAGCGGAAGGGCAAGAGTTTCCGTCACGGATCGTAGCATCCCGGCGTAGGGCGGTGTGTACGGTGTACGTCTTCCGGTCCACGGACTGTCGATTTCGTTATTACACCGGAACCTCCGCTCCGGCAAGGGCAACAGCAGCAGCAGCGTCAATCAAAT      CTGCGACTTCCATACGCTCCCCCTTTGAAACTTATCCGCACAACCAGGCGGCACAACTCCATTGCGGAAGGTGCTGAGCCGAGTTCCGGACCGCACGATGGAACTCTCTCGGATAAAAACCCTTTACTGTGGGTTAATATTTCAGCTGCTCTTCACACTAGCCCTACCGCTGCCCTACAC AAAGTATGGACGTACCTGCGGCGATATCGGTTGCCTGTCTAGCCAGGTGTGCGTGATGGCGTACGAATCCTGCTCGATTGGGCAACGCGAGGGTAACGATTGTGGCCGTTACCCGACCTGCAAAAAGAACAC GGATCCGAGCGTCAGTGCAGGGCCGAGCGAGGGAGTTAGCAATGTGTACAACAACGGTC                                              ]
[+] EMBL BM652624             [                                                                                                                                                                                   ccgAAACAATCTTGAATACAAAGAGCTTCACTCCCGTGCGG  GCTAGCTGTGGCAAAGCGGAAGGGTAAGAGTTTCCGTCACGGATCGTAGCATCCCGGC  AGGGCG  GTGTACGG GTGCGTCTTCCGGTCCACGGACTGTCGATTTCGTTATTACACCGGAACCTCCGCTCCGGCAAGGGCAACAGCAGCAGCAGCGTCAATCAAATCTTCCACTGCGACTTCCGCACGC CATCAATTGAAACTTATCCGCACCACCAGGCGGCACAACTCCATTGCGGAAGGTGCTGAACCGAGTTCCGGACCGCACGATGGAACTCTCTCGGATAAAAACCCTTTACTGTGGGTTAATATTTCAGCTGCTCTTCACACTAGCCCTACCGCTGCCCTACAC AAAGTATGGACGTACCTGCGGCGATATCGGTTGCCTGTCTAGCCAGGTGTGCGTGATGGCGTACGAATCCTGCTCGATCGGGCAACGCGAGGGTAACGATTGTGGCCGTTACCCGACCTGCAAAAAGAACAC GGATCCGAGCGTCAGTGCCGGCCCGAGCGAGGGAGTTAGCAATGTGTACAACAACGGTCCGAAGCCTTCCGCACCGGCCGGTCGTCCCGTACGGCCGTGTCTGTG]




>consensus_9103#1
CCCACGCGTCCGGTCCCGTACGGCCGTGTCTGTGAAGGTGTGTGCTTTACGTAGCGAAGC
GTTTCGCTTTTCGGTGTGTGTTTTAGCGTAGACCGTCTCGGCGTCGCTAACCCATCAGTG
TGGCAAAGCTGCATCAGAAGTTAGCGTTTTGGAGTGTGTGTATAGCTGAAAAAATATATA
AACAATCTTGAATACAAAGAGCTTCACTCCCGTGCGGGCTAGCTGTGGCAAAGCGGAAGG
GTAAGAGTTTCCGTCACGGATCGTAGCATCCCGGCAGGGCGGTGTACGGGTGCGTCTTCC
GGTCCACGGACTGTCGATTTCGTTATTACACCGGAACCTCCGCTCCGGCAAGGGCAACAG
CAGCAGCAGCGTCAATCAAATCTTCCACTGCGACTTCCGCACGCCATCAATTGAAACTTA
TCCGCACCACCAGGCGGCACAACTCCATTGCGGAAGGTGCTGAACCGAGTTCCGGACCGC
ACGATGGAACTCTCTCGGATAAAAACCCTTTACTGTGGGTTAATATTTCAGCTGCTCTTC
ACACTAGCCCTACCGCTGCCCTACACAAAGTATGGACGTACCTGCGGCGATATCGGTTGC
CTGTCTAGCCAGGTGTGCGTGATGGCGTACGAATCCTGCTCGATCGGGCAACGCGAGGGT
AACGATTGTGGCCGTTACCCGACCTGCAAAAAGAACACGGATCCGAGCGTCAGTGCAGGG
CCGAGCGAGGGAGTTAGCAATGTGTACAACAACGGTCCGAAGCCTTCCGCACCGGCCGGT
CGTCCCGTACGGCCGTGTCTGTG

consensusID : consensus_9103#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 658
fasta sequence

                              [CCGGTTGTGCTTTACGTAGCGAAGCGTTTCGCTGTTCGCTGCATCAAAGGTTAGCGTTTTGGAGTGTGTGTATTGCTGAAAAAATATATAAACAATCTTGAATATAAAGAGCTTCACTCCCGTGCGGCAGCTAGCTGTGGCAAAGCGGAAGGGCAAGAGTTTCCGTCACGGATCGTAGCATCCCGGCGTAGGGCGGTGTGTACGGTGTACGTCTTCCGGTCCACGGACTGTCGATTTCGTTATTACACCGGAACCTCCGCTCCGGCAAGGGCAACAGCAGCAGCAGCGTCAATCAAATCTGCGACTTCCATACGCTCCCCCTTTGAAACTTATCCGCACAACCAGGCGGCACAACTCCATTGCGGAAGGTGCTGAGCCGAGTTCCGGACCGCACGATGGAACTCTCTCGGATAAAAACCCTTTACTGTGGGTTAATATTTCAGCTGCTCTTCACACTAGCCCTACCGCTGCCCTACACAAAGTATGGACGTACCTGCGGCGATATCGGTTGCCTGTCTAGCCAGGTGTGCGTGATGGCGTACGAATCCTGCTCGATTGGGCAACGCGAGGGTAACGATTGTGGCCGTTACCCGACCTGCAAAAAGAACACGGATCCGAGCGTCAGTGCAGGGCCGAGCGAGGGAGTTAGCAATGTGTA]

[+] EMBL BM582799             [CCGGTTGTGCTTTACGTAGCGAAGCGTTTCGCTGTTCGCTGCATCAAAGGTTAGCGTTTTGGAGTGTGTGTATTGCTGAAAAAATATATAAACAATCTTGAATATAAAGAGCTTCACTCCCGTGCGGCAGCTAGCTGTGGCAAAGCGGAAGGGCAAGAGTTTCCGTCACGGATCGTAGCATCCCGGCGTAGGGCGGTGTGTACGGTGTACGTCTTCCGGTCCACGGACTGTCGATTTCGTTATTACACCGGAACCTCCGCTCCGGCAAGGGCAACAGCAGCAGCAGCGTCAATCAAATCTGCGACTTCCATACGCTCCCCCTTTGAAACTTATCCGCACAACCAGGCGGCACAACTCCATTGCGGAAGGTGCTGAGCCGAGTTCCGGACCGCACGATGGAACTCTCTCGGATAAAAACCCTTTACTGTGGGTTAATATTTCAGCTGCTCTTCACACTAGCCCTACCGCTGCCCTACACAAAGTATGGACGTACCTGCGGCGATATCGGTTGCCTGTCTAGCCAGGTGTGCGTGATGGCGTACGAATCCTGCTCGATTGGGCAACGCGAGGGTAACGATTGTGGCCGTTACCCGACCTGCAAAAAGAACACGGATCCGAGCGTCAGTGCAGGGCCGAGCGAGGGAGTTAGCAATGTGTA]




>consensus_9103#2
CCGGTTGTGCTTTACGTAGCGAAGCGTTTCGCTGTTCGCTGCATCAAAGGTTAGCGTTTT
GGAGTGTGTGTATTGCTGAAAAAATATATAAACAATCTTGAATATAAAGAGCTTCACTCC
CGTGCGGCAGCTAGCTGTGGCAAAGCGGAAGGGCAAGAGTTTCCGTCACGGATCGTAGCA
TCCCGGCGTAGGGCGGTGTGTACGGTGTACGTCTTCCGGTCCACGGACTGTCGATTTCGT
TATTACACCGGAACCTCCGCTCCGGCAAGGGCAACAGCAGCAGCAGCGTCAATCAAATCT
GCGACTTCCATACGCTCCCCCTTTGAAACTTATCCGCACAACCAGGCGGCACAACTCCAT
TGCGGAAGGTGCTGAGCCGAGTTCCGGACCGCACGATGGAACTCTCTCGGATAAAAACCC
TTTACTGTGGGTTAATATTTCAGCTGCTCTTCACACTAGCCCTACCGCTGCCCTACACAA
AGTATGGACGTACCTGCGGCGATATCGGTTGCCTGTCTAGCCAGGTGTGCGTGATGGCGT
ACGAATCCTGCTCGATTGGGCAACGCGAGGGTAACGATTGTGGCCGTTACCCGACCTGCA
AAAAGAACACGGATCCGAGCGTCAGTGCAGGGCCGAGCGAGGGAGTTAGCAATGTGTA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9103#0      ---------------CCGCCCA--CGCGTCCG----GGTGTGTGCTTTACGTAGCGAAGC 39
consensus_9103#1      CCCACGCGTCCGGTCCCGTACGGCCGTGTCTGTGAAGGTGTGTGCTTTACGTAGCGAAGC 60
consensus_9103#2      ------------------------------------------------------------
                                                                                  

consensus_9103#0      GTTTCGCTTTTCGGTGTGTGTTTTAGCGTAGACCGTCTCGGCGTCGCTAACCCATCAGTG 99
consensus_9103#1      GTTTCGCTTTTCGGTGTGTGTTTTAGCGTAGACCGTCTCGGCGTCGCTAACCCATCAGTG 120
consensus_9103#2      --------------------------------CCGGTTGTGCTTTACGTAGCGAAGCGTT 28
                                                      ***  *  ** *  *  * * *   ** 

consensus_9103#0      TGGCAAA--GCTGCATCAGAAGTTAGCGTTTTGGAGTGTGTGTATAGCTGAAAAAATATA 157
consensus_9103#1      TGGCAAA--GCTGCATCAGAAGTTAGCGTTTTGGAGTGTGTGTATAGCTGAAAAAATATA 178
consensus_9103#2      TCGCTGTTCGCTGCATCAAAGGTTAGCGTTTTGGAGTGTGTGTATTGCTGAAAAAATATA 88
                      * **     ********* * ************************ **************

consensus_9103#0      TAAACAATCTTGAATACAAAGAGCTTCACTCCCGTGCGG--GCTAGCTGTGGCAAAGCGG 215
consensus_9103#1      TAAACAATCTTGAATACAAAGAGCTTCACTCCCGTGCGG--GCTAGCTGTGGCAAAGCGG 236
consensus_9103#2      TAAACAATCTTGAATATAAAGAGCTTCACTCCCGTGCGGCAGCTAGCTGTGGCAAAGCGG 148
                      **************** **********************  *******************

consensus_9103#0      AAGGGTAAGAGTTTCCGTCACGGATCGTAGCATCCCGGC--AGGGCGGTGT--ACGG-GT 270
consensus_9103#1      AAGGGTAAGAGTTTCCGTCACGGATCGTAGCATCCCGGC--AGGGCGGTGT--ACGG-GT 291
consensus_9103#2      AAGGGCAAGAGTTTCCGTCACGGATCGTAGCATCCCGGCGTAGGGCGGTGTGTACGGTGT 208
                      ***** *********************************  **********  **** **

consensus_9103#0      GCGTCTTCCGGTCCACGGACTGTCGATTTCGTTATTACACCGGAACCTCCGCTCCGGCAA 330
consensus_9103#1      GCGTCTTCCGGTCCACGGACTGTCGATTTCGTTATTACACCGGAACCTCCGCTCCGGCAA 351
consensus_9103#2      ACGTCTTCCGGTCCACGGACTGTCGATTTCGTTATTACACCGGAACCTCCGCTCCGGCAA 268
                       ***********************************************************

consensus_9103#0      GGGCAACAGCAGCAGCAGCGTCAATCAAATCTTCCACTGCGACTTCCGCACGC-CATCAA 389
consensus_9103#1      GGGCAACAGCAGCAGCAGCGTCAATCAAATCTTCCACTGCGACTTCCGCACGC-CATCAA 410
consensus_9103#2      GGGCAACAGCAGCAGCAGCGTCAATCAAATCT------GCGACTTCCATACGCTCCCCCT 322
                      ********************************      *********  **** *  *  

consensus_9103#0      TTGAAACTTATCCGCACCACCAGGCGGCACAACTCCATTGCGGAAGGTGCTGAACCGAGT 449
consensus_9103#1      TTGAAACTTATCCGCACCACCAGGCGGCACAACTCCATTGCGGAAGGTGCTGAACCGAGT 470
consensus_9103#2      TTGAAACTTATCCGCACAACCAGGCGGCACAACTCCATTGCGGAAGGTGCTGAGCCGAGT 382
                      ***************** *********************************** ******

consensus_9103#0      TCCGGACCGCACGATGGAACTCTCTCGGATAAAAACCCTTTACTGTGGGTTAATATTTCA 509
consensus_9103#1      TCCGGACCGCACGATGGAACTCTCTCGGATAAAAACCCTTTACTGTGGGTTAATATTTCA 530
consensus_9103#2      TCCGGACCGCACGATGGAACTCTCTCGGATAAAAACCCTTTACTGTGGGTTAATATTTCA 442
                      ************************************************************

consensus_9103#0      GCTGCTCTTCACACTAGCCCTACCGCTGCCCTACACAAAGTATGGACGTACCTGCGGCGA 569
consensus_9103#1      GCTGCTCTTCACACTAGCCCTACCGCTGCCCTACACAAAGTATGGACGTACCTGCGGCGA 590
consensus_9103#2      GCTGCTCTTCACACTAGCCCTACCGCTGCCCTACACAAAGTATGGACGTACCTGCGGCGA 502
                      ************************************************************

consensus_9103#0      TATCGGTTGCCTGTCTAGCCAGGTGTGCGTGATGGCGTACGAATCCTGCTCGATCGGGCA 629
consensus_9103#1      TATCGGTTGCCTGTCTAGCCAGGTGTGCGTGATGGCGTACGAATCCTGCTCGATCGGGCA 650
consensus_9103#2      TATCGGTTGCCTGTCTAGCCAGGTGTGCGTGATGGCGTACGAATCCTGCTCGATTGGGCA 562
                      ****************************************************** *****

consensus_9103#0      ACGCGAGGGTAACGATTGTGGCCGTTACCCGACCTGCAAAAAGAACACGGATCCGAGCGT 689
consensus_9103#1      ACGCGAGGGTAACGATTGTGGCCGTTACCCGACCTGCAAAAAGAACACGGATCCGAGCGT 710
consensus_9103#2      ACGCGAGGGTAACGATTGTGGCCGTTACCCGACCTGCAAAAAGAACACGGATCCGAGCGT 622
                      ************************************************************

consensus_9103#0      CAGTGCCGGCCCGAGCGAGGGAGTTAGCAATGTGTACAACAACGGTCCGAAGCCTTCCGC 749
consensus_9103#1      CAGTGCAGGGCCGAGCGAGGGAGTTAGCAATGTGTACAACAACGGTCCGAAGCCTTCCGC 770
consensus_9103#2      CAGTGCAGGGCCGAGCGAGGGAGTTAGCAATGTGTA------------------------ 658
                      ****** ** **************************                        

consensus_9103#0      ACCGGCCGGTCGCCCTGGAGACGACGATGTGCTCGGCACACTCGGTTTGAATCCTAACAA 809
consensus_9103#1      ACCGGCCGGTCGTCCCGTA--CGGCCGTGTCTGTG------------------------- 803
consensus_9103#2      ------------------------------------------------------------
                                                                                  

consensus_9103#0      TCCGTACGGCCAGCGCCCAACGCCACCACCGGCCCGAC 847
consensus_9103#1      --------------------------------------
consensus_9103#2      --------------------------------------