cluster # 9104

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Anopheles gambiae
cluster # 9104 cluster # 9104 Sequences # 14 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9104#0 length = 968 sequences # 8
consensus_9104#1 length = 780 sequences # 4

consensus_9104#2 length = 752 sequences # 1
consensus_9104#3 length = 334 sequences # 1

consensusID : consensus_9104#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 968
fasta sequence

                              [GCCTTTTTTTTTTTTTTTTTTTTTTTTAAGTTGAGTTGAGTTTAGTATTAAAATAAAGGATCCTCCTTCCACCCCGAGCCCCGTTGTGTCACAAT-AAAAAAAAAATAGAGGAAATTGCCTACCACTTACTTCATCCCCACCTTCCCCAGCTTCGTGTCGGTGCGCGGATCGGCCGTCACATTCTGCACCGCCACGATCGTTTCGTTGATCGTCGTCTGCAGCGTGCGAATGTTTTGAATCTGCAGCAGGCGCATTATCCTTGCGCACTGCTCCAGCTCCTCGTCGGCTTCTAGGCCCATCCCGCTGCCCTGCTCGATCGGGAACGGCTGCCCGGTGATGGGACGCTCCTTCAGCGCTTCCCTGTTGTACGCACCGCTGATAACTTTGGCGGCCGCACGCAGCGACACGAGATGATCCGGATGGTAGGCGATTCCCAGCCGCTCGGCCAGCTTCCACGAGCCCTCCTCAAAGTCCGCGCTGGTAAAGTCAAAGCTGTCGAACGGGTTCGCCGACTGTACCTCCGGGACGGTCGTTTTCTGCGACTCTTGCTGCAGCTTGCGCGCACCGGTCAGCGCGCGGTACTGGTCCGCGTTGTCCGTGTACTCGAGCCGGATCGCGTACAGCAGCAGCCACGTTACCTGCTCCTGCTTCGACTTCAGGTGCTCCGGCACCTTGATGTCTTTCTTGTACTTTTCGTACGCCCGGTTCCACTCGTCCGGTGCGTTTACCTTCCGCAGCGGTTCCCGCTCTTCGATCGGCAGGAAGCGAATCTTCTGATCCTCCAGCCACATCATGAAGCAGCGGAAATCCTTCGGATCATCGATATTTAGCTGTC-CTACGCGAGGATACTGAAGGGCTGTGAGATAACGTTC-GAACATATCACTGGGGAG-CGATTGATGTTTATCCTTTTTTTTCTTTTTCCTGATGGTATGGTGGAGATTGGCGTCCCCGCTTGTTTTTTCCAGTAG]

[+] EMBL CNS091SW             [GCCTTTTTTTTTTTTTTTTTTTTTTTTAAGTTGAGTTGAGTTTAGTATTAAAATAAAGGATCCTCCTTCCACCCCGAGCCCCGTTGTGTCACAAT AAAAAAAAAATAGAGGAAATTGCCTACCACTTACTTCATCCCCACCTTCCCCAGCTTCGTGTCGGTGCGCGGATCGGCCGTCACATTCTGCACCGCCACGATCGTTTCGTTGATCGTTGTCTGCAGCGTGCGAATGTTTTGAATCTGCAGCAGGCGCATTATCCTTGCGCACTGCTCCAGCTCCTCGTCGGCTTCTAGGCCCATCCCGCTGCCCTGCTCGATCGGGAACGGCTGCCCGGTGATGGGACGCTCCTTCAGCGCTTCCCTGTTGTACGCACCGCTGATAACTTTGGCGGCCGCACGCAGCGACACGAGATGATCCGGATGGTAGGCGATTCCCAGCCGCTCGGCCAGCTTCCACGAGCCCTCCTCAAAGTCCGCGCTGGTAAAGTCAAAGCTGTCGAACGGGTTCGCCGACTGTACCTCCGGGACGGTCGTTTTCTGCGACTCTTGCTGCAGCTTGCGCGCACCGGTCAGCGCGCGGTACTGGTCCGCGTTGTCCGTGTACTCGAGCCGGATCGCGTACAGCAGCAGCCACGTTACCTGCTCCTGCTTCGACTTCAGGTGCTCCGGCACCTTG                                                                                                                                                                                                                                                                                                        ]
[-] EMBL BX613400             [                            AGTTGAGTTGAGTTTAGTATTAAAATAAAGGATCCTCCTTCCACCCCGAGCCCCGTTGTGTCACAATAAAAAAAAAAATAGAGGAAATTGCCTACCACTTACTTCATCCCCACCTTCCCCAGCTTCGTGTCGGTGCGCGGATCGGCCGTCACATTCTGCACCGCCACGATCGTTTCGTTGATCGTTGTCTGCAGCGTGCGAATGTTTTGAATCTGCAGCAGGCGCATTATCCTTGCGCACTGCTCCAGCTCCTCGTCGGCTTCTAGGCCCATCCCGCTGCCCTGCTCGATCGGGAACGGCTGCCCGGTGATGGGACGCTCCTTCAGCGCTTCCCTGTTGTACGCACCGCTGATAACTTTGGCGGCCGCACGCAGCGACACGAGATGATCCGGATGGTAGGCGATTCCCAGCCGCTCGGCCAGCTTCCACGAGCCCTCCTCAAAGTCCGCGCTGGTAAAGTCAAAGCTGTCGAACGGGTTCGCCGACTGTACCTCCGGGACGGTCGTTTTCTGCGACTCTTGCTGCAGCTTGCGCGCACCGGTCAGCGCGCGGTACTGGTCCGCGTTGTCCGTGTACTCGAGCCGGATCGCGTACAGCAGCAGCCACGTTACCTGCTCCTGCTTCGACTTCAGGTGCTCCGGCACCTTGATGTCTTTCTTGTACTTTTCGTACGCCCGGTTCCACTCGTCCGGTGCGTTTACCTTCCGCAGCGGTTCCCGCTCTTCGATCGGCAGGAAGCGAATCTTCTGATCCTCCAGCCACATCATGAAGCAGCGGAAATCCTTCGGATAAAGGATATTTAGCTGTC CTACGCG                                                                                                                                ]
[+] EMBL CNS08M5C             [                                                                                                         ATATAGAAAATTTTCTACCAGTGACTTCATCCCCACCTTCCCCAGCTTCGTGTCGGTGCGCGGATCGGCCGTCACATTCTGCACCGCCACGATCGTTTCGTTGATCGTCGTCTGCAGCGTGCGAATGTTTTGTATCTGCAGCAGGCGCATTATCCTTGCGCACTGCTCCAGCTCCTCGTCGGCCTCCAGGCCCATCCCGCTGCCCTGCTCGATCGGGAACGGCTGCCCGGTGATGGGGCGCTCCTTCAGCGCTTCCCTGTTGTACGCACCGCTGATAACTTTGGCGGCCGCCCGCAGCGACACGAGATGATCCGGATGGTAGGCGATTCCCAGCCGCTCGGCCAGCTTCCACGAGCCCTCCTCGAAGTCCGCGCTGGTAAAGTCAAAGCTGTCGAACGGGTTCGCCGACTGTACCTCCGGGACGGTCGTTTTCTGCGACTCTAGCTGCAGCTTGCGCGCACCGGTCAGCGCGCGGTACTGGTCCGCGTAGTCCGTGTACTCGAGCCGGATCGCGTACAGCAGCAGCCACGTTACCTGCTCCTGCTTCGACTTCAGGTGCTCCGGCACCTTGATGTCTTTCTTGTACTTTTCGTACGCCCGGTTCCACTCGTCCGGTGCGTTTACCTTCCGCAGCGGTTCCCGCTCTTCGACCGGCAGGAAGCGAATCTTCTGATCCTCCAGCCACATCATGAAGCAGCGGAAATCCTTCGGATCATCGATATTTAGCTGTT CTACGCGAGGATACTGAAGGGCTGTTAGACAACGCTC GAACATATCACTGGGGAG CGATTTATGTTTATCCTTTTTTTTCTATTTCCTGATGGTATGGTGGAGATTGGCGTCCCCGCTTGTTTTTTCCAGTAG]
[-] EMBL CNS08M5B             [                                                                                                                                                                            GCCGTCACATTCTGCACCGCCACGATCGTTTCGTTGATCGTCGTCTGCAGCGTGCGAATGTTTTGTATCTGCAGCAGGCGCATTATCCTTGCGCACTGCTCCAGCTCCTCGTCGGCCTCCAGGCCCATCCCGCTGCCCTGCTCGATCGGGAACGGCTGCCCGGTGATGGGGCGCTCCTTCAGCGCTTCCCTGTTGTACGCACCGCTGATAACTTTGGCGGCCGCCCGCAGCGACACGAGATGATCCGGATGGTAGGCGATTCCCAGCCGCTCGGCCAGCTTCCACGAGCCCTCCTCGAAGTCCGCGCTGGTAAAGTCAAAGCTGTCGAACGGGTTCGCCGACTGTACCTCCGGGACGGTCGTTTTCTGCGACTCTTGCTGCAG TTGCGCGCACCGGTCAGCGCGCGGTACTGGTCCGCGTTGTCCGTGTACTCGAGCCGGATCGCGTACAGCAGCAGCCACGTTACCTGCTCCTGCTTCGACTTCAGGTGCTCCGGCACCTTGATGTCTTTCTTGTACTTTTCGTACGCCCGGTTCCACTCGTCCGGTGCGTTTACCTTCCGCA CGGTTCCCGCTCTTCGACCGGCAGGAAGCGAATCTTCTGATCCTCCAGCCACATCATGAAGCAGCGGAAAT CTTCGGATCATCGATATTTAGCTGTCACTACGCGAGGATACTGAAGGGCTGTGAGATAACGCTC GAACATATCACTGGGGAA CG                                                                            ]
[-] EMBL BM641245             [                                                                                                                                                                                                      CGTTTCGTTGATCGTCGTCTGCAGCGTGCGAATGTTTTGAATCTGCAGCAGGCGCATTATCCTTGCGCACTGCTCCAGCTCCTCGTCGGCCTCCAGGCCCATCCCGCTGCCCTGCTCGATCGGGAACGGCTGCCCGGTGATGGGGCGCTCCTTCAGCGCTTCCCTGTTGTACGCACCGCTGATAACTTTGGCGGCGGCCCGCAGCGACACGAGATGGTCCGGATGGTAGGCAATTCCCAGCCGCTCGGCCAGCTTCCACGAGCCCTCCTCGAAGTCCGCGCTGGTAAAGTCAAAGCTGTCGAACGGGTTCGCCGACTGTACCTCCGGGACGGTCGTTTTCTGCGACTCTTGCTGCAGCTTGCGCGCACCGGTCAGCGCGCGGTACTGGTCCGCGTTGTCCGTGTACTCGAGCCGGATCGCGTACAGCAGCAGCCACGTTACCTGCTCCTGCTTCGACTTCAGGTGCTCCGGCACCTTGATGTCCTTCTTGTACTTTTCGTACGCCCGGTTCCACTCGTCCGGTGCGTTTACCTTCCGCAGCGGTTCCCGCTCTTCGATCGGCAGGAAGCGAATCTTCTGATCCTCCAGCCACATCATGAAGCAGCGGAAATCCTTGGGATCATCGATATTTAGCTGTC CTACGCGAGGATACTGCAGGGCTGTGAGATAACGTTC GAACATATCACTGGGGAG CGATTGATGcgg                                                                  ]
[-] EMBL CNS091SV             [                                                                                                                                                                                                                                                                                      CCTCGTCGGCTTCTAGGCCCATCCCGCTGCCCTGCTCGATCGGGAACGGCTGCCCGGTGATGGGACGCTCCTTCAGCGCTTCCCTGTTGTACGCACCGCTGATAACTTTGGCGGCCGCACGCAGCGACACGAGATGATCCGGATGGTAGGCGATTCCCAGCCGCTCGGCCAGCTTCCACGAGCCCTCCTCAAAGTCCGCGCTGGTAAAGTCAAAGCTGTCGAACGGGTTCGCCGACTGTACCTCCGGGACGGTCGTTTTCTGCGACTCTTGCTGCAGCTTGCGCGCACCGGTCAGCGCGCGGTACTGGTCCGCGTTGTCCGTGTACTCGAGCCGGATCGCGTACAGCAGCAGCCACGTTACCTGCTCCTGCTTCGACTTCAGGTGCTCCGGCACCTTGATGTCTTTCTTGTACTTTTCGTACGCCCGGTTCCACTCGTCCGGTGCGTTTACCTTCCGCAGCGGTTCCCGCTCTTCGATCGGCAGGAAGCGAATCTTCTGATCCTCCAGCCACATCATGAAGCAGCGGAAATCCTTCGGATCATCGATATTTAGCTGTC CTACGCGAGGATACTGAAGGGCTGTGAGATAACGTTCGGAACATATCACTGGGGGGCCAATTGATGTTTATTTTTTTTTTTTTTTT                                                 ]
[-] EMBL AL933276             [                                                                                                                                                                                                                                                                                                                                                                                                                                            CGATTCCCAGCCGCTCGGCCAGCTTCCACGAGCCCTCCTCAAAGTCCGCGCTGGTAAAGTCAAAGCTGTCGAACGGGTTCGCCGACTGTACCTCCGGGACGGTCGTTTTCTGCGACTCTTGCTGCAGCTTGCGCGCACCGGTCAGCGCGCGGTACTGGTCCGCGTTGTCCGTGTACTCGAGCCGGATCGCGTACAGCAGCAGCCACGTTACCTGCTCCTGCTTCGACTTCAGGTGCTCCGGCACCTTGATGTCTTTCTTGTACTTTTCGTACGCCCGGTTCCACTCGTCCGGTGCGTTTACCTTCCGCAGCGGTTCCCGCTCTTCGATCGGCAGGAAGCGAATCTTCTGATCCTCCAGCCACATCATGAAGCAGCGGAAATCCTTCGGATCATCGATATTTAGCTGTC CTACGCGAGGATACTGAAGGGCTGTGAGATAACGTTC GAACATATCACTGGGGAG CAATTGATGTTTATCC  TTTTTTCTTTTTCCTGATGGTATGGTGGAG TTGnacctcggg                 ]
[-] EMBL BM586814             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 CCGGATCGCGTACAGCAGCAGCCACGTTACCTGCTCCTGCTTCGACTTCAGGTGCTCCGGCACCTTGATGTCCTTCTTGTACTTTTCGTACACCCGGTTCCACTCGTCCGGTGCGTTTACCTTCCGCAGCGGTTCCCGCTCTTCGATCGGCAGGAAGCGAATCTTTTGATCCTCCAGCCACATCATGAAGCAGCGGAAATCCTTGGGATCATCGATATTTAGCTGTC CTACGCGAGGATACTGCAGGGCTGTGAGATAACGTTC GAACATATCACTGGGGAG CGATTGATGTTTGTCCcgg                                                           ]




>consensus_9104#0
GCCTTTTTTTTTTTTTTTTTTTTTTTTAAGTTGAGTTGAGTTTAGTATTAAAATAAAGGA
TCCTCCTTCCACCCCGAGCCCCGTTGTGTCACAATAAAAAAAAAATAGAGGAAATTGCCT
ACCACTTACTTCATCCCCACCTTCCCCAGCTTCGTGTCGGTGCGCGGATCGGCCGTCACA
TTCTGCACCGCCACGATCGTTTCGTTGATCGTCGTCTGCAGCGTGCGAATGTTTTGAATC
TGCAGCAGGCGCATTATCCTTGCGCACTGCTCCAGCTCCTCGTCGGCTTCTAGGCCCATC
CCGCTGCCCTGCTCGATCGGGAACGGCTGCCCGGTGATGGGACGCTCCTTCAGCGCTTCC
CTGTTGTACGCACCGCTGATAACTTTGGCGGCCGCACGCAGCGACACGAGATGATCCGGA
TGGTAGGCGATTCCCAGCCGCTCGGCCAGCTTCCACGAGCCCTCCTCAAAGTCCGCGCTG
GTAAAGTCAAAGCTGTCGAACGGGTTCGCCGACTGTACCTCCGGGACGGTCGTTTTCTGC
GACTCTTGCTGCAGCTTGCGCGCACCGGTCAGCGCGCGGTACTGGTCCGCGTTGTCCGTG
TACTCGAGCCGGATCGCGTACAGCAGCAGCCACGTTACCTGCTCCTGCTTCGACTTCAGG
TGCTCCGGCACCTTGATGTCTTTCTTGTACTTTTCGTACGCCCGGTTCCACTCGTCCGGT
GCGTTTACCTTCCGCAGCGGTTCCCGCTCTTCGATCGGCAGGAAGCGAATCTTCTGATCC
TCCAGCCACATCATGAAGCAGCGGAAATCCTTCGGATCATCGATATTTAGCTGTCCTACG
CGAGGATACTGAAGGGCTGTGAGATAACGTTCGAACATATCACTGGGGAGCGATTGATGT
TTATCCTTTTTTTTCTTTTTCCTGATGGTATGGTGGAGATTGGCGTCCCCGCTTGTTTTT
TCCAGTAG

consensusID : consensus_9104#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 780
fasta sequence

                              [ACCCGCCACGATCGTTTCCGCTTAGACTCCNTCGTTCTGCAAGGCGTCCCGAAATGCTCTTTCGAATCCTGCANCCAGGCCGCCATNATCCCGTTGCGCCACCTGCTTCCAGCCTCCTCGTCGGCTTTCCTAAGGCCCATCCCGCTGCCCTGCCTCGATCGGGAACGGCTGTCCCGGTGATGGAACGCTCCTTCAGCGCTTCCCTGTTTGTACGCACCGCTGATAACCTTTGGCGGCCGCACGCAGCGGACACGAGATGATCCGGATGGTAGCCGATTCCCAGCCGCTCGGCCAGCTTTCCACGAGCCCTCCTCAAAGTCCGCGCTGGTAAAGTCAAAGCTGTCGAACGGGTTCGCCGACTGTACCTCCGGGACGGTCGT-TTTCT-GCGACTCTTGCTGCAGCTTGCGCGCACCGGTCAGCGCGCGGTACTGGTCCGCGTTGTCCGTGTACTCGAGCCGGATCGCGTACAGCAGCAGCCACGTTACCTGCTCCTGCTTCGACTTCAGGTG-CTCCGGCACC-TTGATGTCTTTCTTGTACTTTTCGTACGCCCGGTTCCACTCGTCCGGTGCGTTTACCTTCCGCAGCGGTTCCCGCTCTTCGATCGGCAGGAAGCGAATCTTCTGATCCTCCAGCCACATCATGAAGCAGCGGAAATCCTTCGGATCATCGATATTTAGCTGTCCTAC-GCGAGGATACTGAAGGGCTGTGAGATAACGTTCGAACATATCACTGGGGAGCAATTGATG-TTATCC-TTTTTCTTAACACCCTCG-GCCGATTCTT]

[-] EMBL BX468590             [ACCCGCCACGATCGTTTCCGCTTAGACTCCNTCGTTCTGCAAGGCGTCCCGAAATGCTCTTTCGAATCCTGCANCCAGGCCGCCATNATCCCGTTGCGCCACCTGCTTCCAGCCTCCTCGTCGGCTTTCCTAAGGCCCATCCCGCTGCCCTGCCTCGATCGGGAACGGCTGTCCCGGTGATGGAACGCTCCTTCAGCGCTTCCCTGTTTGTACGCACCGCTGATAACCTTTGGCGGCCGCACGCAGCGGACACGAGATGATCCGGATGGTAGCCGATTCCCAGCCGCTCGGCCAGCTTTCCACGAGCCCTCCTCAAAGTCCGCGCTGGTAAAGTCAAAGCTGTCGAACGGGTTCGCCGACTGTACCTCCGGGACGGTCGTCTTTCTCGCGACTCTTGCTGCAGCTTGCGCGCACCGGTCAGCGCGCGGTACTGGTCCGCGTTGTCCGTGTACTCGAGCCGGATCGCGTACAGCAGCAGCCACGTTACCTGCTCCTGCTTCGACTTCAGGTGCCTCCGGCACC TTGATGTCTTTCTTGTACTTTTCGTACGCCCGGTTCCACTCGTCCGGTGCGTTTACCTTCCGCAGCGGTTCCCGCTCTTCGATCGGCAGGAAGCGAATCTTCTGATCCTCCAGCCACATCATGAAGCAGCGGAAATCCTTCGGATCATCGATATTTAGCTGTCCTACGGCGAGGATACTGAAGGGCTGTGAGATAACGTTCGAACATATCACTGGGGAGCAATTGATG TTATCC TTTT      CACCCTCG GCCGATTCTT]
[-] EMBL AL695281             [                                                                                                                                                                                                                                                                                                                       CTCAAAGTCCGCGCTGGTAAAGTCAAAGCTGTCGAACGGGTTCGCCGACTGTACCTCCGGGACGGTCGT TTTCT GCGACTCTTGCTGCAGCTTGCGCGCACCGGTCAGCGCGCGGTACTGGTCCGCGTTGTCCGTGTACTCGAGCCGGATCGCGTACAGCAGCAGCCACGTTACCTGCTCCTGCTTCGACTTCAGGTG CTCCGGCACC TTGATGTCTTTCTTGTACTTTTCGTACGCCCGGTTCCACTCGTCCGGTGCGTTTACCTTCCGCAGCGGTTCCCGCTCTTCGATCGGCAGGAAGCGAATCTTCTGATCCTCCAGCCACATCATGAAGCAGCGGAAATCCTTCGGATCATCGATATTTAGCTGTCCTAC GCGAGGATACTGAAGGGCTGTGAGATAACGTTCG ACATATCACT GGGAGCAATTGATG TTATCC TTTTTCTTAACtg                ]
[-] EMBL AL932268             [                                                                                                                                                                                                                                                                                                                             GTCCGCGCTGGTAAAGTCAAAGCTGTCGAACGGGTTCGCCGACTGTACCTCCGGGACGGTCGT TTTCT GCGACTCTTGCTGCAGCTTGCGCGCACCGGTCAGCGCGCGGTACTGGTCCGCGTTGTCCGTGTACTCGAGCCGGATCGCGTACAGCAGCAGCCACGTTACCTGCTCCTGCTTCGACTTCAGGTG CTCCGGCACC TTGATGTCTTTCTTGTACTTTTCGTACGCCCGGTTCCACTCGTCCGGTGCGTTTACCTTCCGCAGCGGTTCCCGCTCTTCGATCGGCAGGAAGCGAATCTTCTGATCCTCCAGCCACATCATGAAGCAGCGGAAATCCTTCGGATCATCGATATTTAGCTGTCCTAC GCGAGGATACTGAAGGGCTGTGAGATAACGTTCG ACATATCACTGGGGAGCAAcctg                                       ]
[-] EMBL BX467585             [                                                                                                                                                                                                                                                                                                                                                                                    ACGGTCGT TTTCT GCGACTCTTGCTGCAGCTTGCGCGCACCGGTCAGCGCGCGGTACTGGTCCGCGTTGTCCGTGTACTCGAGCCGGATCGCGTACAGCAGCAGCCACGTTACCTGCTCCTGCTTCGACTTCAGGTG CTCCGGCACCGTTGATGTCTTTCTTGTACTTTTCGTACGCCCGGTTCCACTCGTCCGGTGCGTTTACCTTCCGCAGCGGTTCCCGCTCTTCGATCGGCAGGAAGCGAATCTTCTGATCCTCCAGCCACATCATGAAGCAGCGGAAATCCTTCGGATCATCGATATTTAGCTGTCCTAC GCGAGGATACTGAAGGGCTGTGAGATAACGTTCGAACATATCACTGGGGAGCAATTGATGTTTATCCTTTTTTCTTTTTCCCCTCGTGCCGATctgc]




>consensus_9104#1
ACCCGCCACGATCGTTTCCGCTTAGACTCCNTCGTTCTGCAAGGCGTCCCGAAATGCTCT
TTCGAATCCTGCANCCAGGCCGCCATNATCCCGTTGCGCCACCTGCTTCCAGCCTCCTCG
TCGGCTTTCCTAAGGCCCATCCCGCTGCCCTGCCTCGATCGGGAACGGCTGTCCCGGTGA
TGGAACGCTCCTTCAGCGCTTCCCTGTTTGTACGCACCGCTGATAACCTTTGGCGGCCGC
ACGCAGCGGACACGAGATGATCCGGATGGTAGCCGATTCCCAGCCGCTCGGCCAGCTTTC
CACGAGCCCTCCTCAAAGTCCGCGCTGGTAAAGTCAAAGCTGTCGAACGGGTTCGCCGAC
TGTACCTCCGGGACGGTCGTTTTCTGCGACTCTTGCTGCAGCTTGCGCGCACCGGTCAGC
GCGCGGTACTGGTCCGCGTTGTCCGTGTACTCGAGCCGGATCGCGTACAGCAGCAGCCAC
GTTACCTGCTCCTGCTTCGACTTCAGGTGCTCCGGCACCTTGATGTCTTTCTTGTACTTT
TCGTACGCCCGGTTCCACTCGTCCGGTGCGTTTACCTTCCGCAGCGGTTCCCGCTCTTCG
ATCGGCAGGAAGCGAATCTTCTGATCCTCCAGCCACATCATGAAGCAGCGGAAATCCTTC
GGATCATCGATATTTAGCTGTCCTACGCGAGGATACTGAAGGGCTGTGAGATAACGTTCG
AACATATCACTGGGGAGCAATTGATGTTATCCTTTTTCTTAACACCCTCGGCCGATTCTT

consensusID : consensus_9104#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 752
fasta sequence

                              [NCTGNCAAGTCAGGGCCTGCGATTTAGTCCCGCTTCTGCCGCTATCTTGGCTTCCCCTATGTCTTCNTTTTCGTCGTCCGGCTTTTCTTACGGTCCCCCAATGTCNCCCGGCTTGGCCTCCTTGGCNCTTCGTGTATTCCGGGGGCNTCCGGTCTGCCNCCGGTTGAATGGGACGCTCCCTTCAGCGTCTTGCCCTGTTGTACCGCACCGCTGATAACTTTGCCCGGCCGCACTGCAGCTGACACGAGATGATCCGGATGGTAGCGATTCCCAGCCGCTCGTGCCAGCTTCCACGAGCCCTCCTCAAAGTCCGCGCTGGTAAAGTCAAAGCTGTCGAACGGGTTCGCCGACTGTACCTCCGGGACGGTCGTTTTCTGCGACTCTTTGCTGCAGCTTGCGCGCACCGGTCAGCGCGCGGTACTGGTCCGCGTTGTCCGTGTACTCGAGCCGGATCGCGTACAGCAGCAGCCACGTTACCTGCTCCTGCTTCGACTTCAGGTGCTCCGGCACCTTGATGTCTTTCTTGTACTTTTCGTACGCCCGGTTCCACTCGTCCGGTGAGTTTACCTTCCGCAGCGGTTCCCGCTCTTCGATCGGCAGGAAGCGAATCTTCTGATCCTCCAGCCACATCATGAAGCAGCGGAAATCCTTCGGATCATCGATATTTAGCTGTCCTACGCGAGGATACTGAAGGGCTGTGAGATAACGGTTCGAACATATCACTGGGGANTCAAACCTCGTGCNCGATTCTG]

[-] EMBL BX467236             [NCTGNCAAGTCAGGGCCTGCGATTTAGTCCCGCTTCTGCCGCTATCTTGGCTTCCCCTATGTCTTCNTTTTCGTCGTCCGGCTTTTCTTACGGTCCCCCAATGTCNCCCGGCTTGGCCTCCTTGGCNCTTCGTGTATTCCGGGGGCNTCCGGTCTGCCNCCGGTTGAATGGGACGCTCCCTTCAGCGTCTTGCCCTGTTGTACCGCACCGCTGATAACTTTGCCCGGCCGCACTGCAGCTGACACGAGATGATCCGGATGGTAGCGATTCCCAGCCGCTCGTGCCAGCTTCCACGAGCCCTCCTCAAAGTCCGCGCTGGTAAAGTCAAAGCTGTCGAACGGGTTCGCCGACTGTACCTCCGGGACGGTCGTTTTCTGCGACTCTTTGCTGCAGCTTGCGCGCACCGGTCAGCGCGCGGTACTGGTCCGCGTTGTCCGTGTACTCGAGCCGGATCGCGTACAGCAGCAGCCACGTTACCTGCTCCTGCTTCGACTTCAGGTGCTCCGGCACCTTGATGTCTTTCTTGTACTTTTCGTACGCCCGGTTCCACTCGTCCGGTGAGTTTACCTTCCGCAGCGGTTCCCGCTCTTCGATCGGCAGGAAGCGAATCTTCTGATCCTCCAGCCACATCATGAAGCAGCGGAAATCCTTCGGATCATCGATATTTAGCTGTCCTACGCGAGGATACTGAAGGGCTGTGAGATAACGGTTCGAACATATCACTGGGGANTCAAACCTCGTGCNCGATTCTG]




>consensus_9104#2
NCTGNCAAGTCAGGGCCTGCGATTTAGTCCCGCTTCTGCCGCTATCTTGGCTTCCCCTAT
GTCTTCNTTTTCGTCGTCCGGCTTTTCTTACGGTCCCCCAATGTCNCCCGGCTTGGCCTC
CTTGGCNCTTCGTGTATTCCGGGGGCNTCCGGTCTGCCNCCGGTTGAATGGGACGCTCCC
TTCAGCGTCTTGCCCTGTTGTACCGCACCGCTGATAACTTTGCCCGGCCGCACTGCAGCT
GACACGAGATGATCCGGATGGTAGCGATTCCCAGCCGCTCGTGCCAGCTTCCACGAGCCC
TCCTCAAAGTCCGCGCTGGTAAAGTCAAAGCTGTCGAACGGGTTCGCCGACTGTACCTCC
GGGACGGTCGTTTTCTGCGACTCTTTGCTGCAGCTTGCGCGCACCGGTCAGCGCGCGGTA
CTGGTCCGCGTTGTCCGTGTACTCGAGCCGGATCGCGTACAGCAGCAGCCACGTTACCTG
CTCCTGCTTCGACTTCAGGTGCTCCGGCACCTTGATGTCTTTCTTGTACTTTTCGTACGC
CCGGTTCCACTCGTCCGGTGAGTTTACCTTCCGCAGCGGTTCCCGCTCTTCGATCGGCAG
GAAGCGAATCTTCTGATCCTCCAGCCACATCATGAAGCAGCGGAAATCCTTCGGATCATC
GATATTTAGCTGTCCTACGCGAGGATACTGAAGGGCTGTGAGATAACGGTTCGAACATAT
CACTGGGGANTCAAACCTCGTGCNCGATTCTG

consensusID : consensus_9104#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 334
fasta sequence

                              [CCGATCTTCTAAAACCGGCCAGCAACCATCTCGCAGAAGGACTAAAAATGACCGATTCCGTTGTTTCCAACCGACACAAGGACTGTTTACCCTGTCGCCTAGTTAGCGGGTTCGGTGTAATCGGCATGGGCGTCTACATAGCAGTGCAAGCACAGAAAAAAACGAAACCTCTTGGCCGCTTCACCATGCTGGGCATTGCCGCCGTCGCCGGCAGTATAGGCATTGCACGCCTAGCCGATGTGTACCCCCTTTGGCGAAAGAGTGCACAAATAGCTTTTTCAGTTTAAGTTGAGTTGAGTTTAGTATTAAAATAAAAGATCCTCCTTCCACCCCG]

[+] EMBL BM594429             [CCGATCTTCTAAAACCGGCCAGCAACCATCTCGCAGAAGGACTAAAAATGACCGATTCCGTTGTTTCCAACCGACACAAGGACTGTTTACCCTGTCGCCTAGTTAGCGGGTTCGGTGTAATCGGCATGGGCGTCTACATAGCAGTGCAAGCACAGAAAAAAACGAAACCTCTTGGCCGCTTCACCATGCTGGGCATTGCCGCCGTCGCCGGCAGTATAGGCATTGCACGCCTAGCCGATGTGTACCCCCTTTGGCGAAAGAGTGCACAAATAGCTTTTTCAGTTTAAGTTGAGTTGAGTTTAGTATTAAAATAAAAGATCCTCCTTCCACCCCG]




>consensus_9104#3
CCGATCTTCTAAAACCGGCCAGCAACCATCTCGCAGAAGGACTAAAAATGACCGATTCCG
TTGTTTCCAACCGACACAAGGACTGTTTACCCTGTCGCCTAGTTAGCGGGTTCGGTGTAA
TCGGCATGGGCGTCTACATAGCAGTGCAAGCACAGAAAAAAACGAAACCTCTTGGCCGCT
TCACCATGCTGGGCATTGCCGCCGTCGCCGGCAGTATAGGCATTGCACGCCTAGCCGATG
TGTACCCCCTTTGGCGAAAGAGTGCACAAATAGCTTTTTCAGTTTAAGTTGAGTTGAGTT
TAGTATTAAAATAAAAGATCCTCCTTCCACCCCG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9104#0      GCCTTTTTTTTTTTTTTTTTTTTTTTTAAGTTGAGTTGAGTTTAGTATTAAAATAAAGGA 60
consensus_9104#1      ------------------------------------------------------------
consensus_9104#2      ------------------------------------------------------------
consensus_9104#3      ------------------------------------------------------------
                                                                                  

consensus_9104#0      TCCTCCTTCCACCCCGAGCCCCGTTGTGTCACAATAAAAAAAAAATAGAGGAAATTGCCT 120
consensus_9104#1      ------------------------------------------------------------
consensus_9104#2      ------------------------------------------------------------
consensus_9104#3      ------------------------------------------------------------
                                                                                  

consensus_9104#0      ACCACTTACTTCATCCCCACCTTCCCCAGCTTCGTGTCGGTGCGCGGATCGGCCGTCACA 180
consensus_9104#1      -----------------------------------------ACCCGCCACGATCGT---- 15
consensus_9104#2      --------------------------------------NCTGNCAAGTCAGGGCCTGCGA 22
consensus_9104#3      ------------------------------------------------------------
                                                                                  

consensus_9104#0      TTCTGCACCGCCACGATCGTTTCGTTGATCGTCGTCTGCAGCGTGCGAATGTTTTGAATC 240
consensus_9104#1      TTCCGCTTAGACTCCNTCGTTCTGCAAGGCGTCCCGAAATGCTCTTTCGAATCCTGCANC 75
consensus_9104#2      TTTAGTCCCGCTTCTGCCGCTATCTTGGCTTCCCCTATGTCTTCNTTTTCGTCGTCCGGC 82
consensus_9104#3      ------------------------------------------------------------
                                                                                  

consensus_9104#0      TGCAGCAGGCGCATTATCCTTGCGCA--CTGCT-CCAGC-TCCTCGTCGGCTTCT---AG 293
consensus_9104#1      CA-GGCCGCCATNATCCCGTTGCGCCACCTGCTTCCAGCCTCCTCGTCGGCTTTCCTAAG 134
consensus_9104#2      TT---TTCTTACGGTCCCCCAATGTCNCCCGGC-TTGGC---CTCCTTGGCNCTTC---- 131
consensus_9104#3      ------------------------------------------------------------
                                                                                  

consensus_9104#0      GCCCATCCCGCTGCCCTGC-TCGATCGGGAACGGCTG-CCCGGTGATGGGACGCTCC-TT 350
consensus_9104#1      GCCCATCCCGCTGCCCTGCCTCGATCGGGAACGGCTGTCCCGGTGATGGAACGCTCC-TT 193
consensus_9104#2      GTGTATTCCGGGGGCNTCC--GGTCTGCCNCCGGTTG-------AATGGGACGCTCCCTT 182
consensus_9104#3      ------------------------------------------------------------
                                                                                  

consensus_9104#0      CAGCGCTT--CCCTGTT-GTACGCACCGCTGATAAC-TTTGGCGGCCGCAC-GCAGCG-A 404
consensus_9104#1      CAGCGCTT--CCCTGTTTGTACGCACCGCTGATAACCTTTGGCGGCCGCAC-GCAGCGGA 250
consensus_9104#2      CAGCGTCTTGCCCTGTTGTACCGCACCGCTGATAACTTTGCCCGGCCGCACTGCAGCTGA 242
consensus_9104#3      ------------------------------------------------------------
                                                                                  

consensus_9104#0      CACGAGATGATCCGGATGGTAGGCGATTCCCAGCCGCTCG-GCCAGCTT-CCACGAGCCC 462
consensus_9104#1      CACGAGATGATCCGGATGGTAGCCGATTCCCAGCCGCTCG-GCCAGCTTTCCACGAGCCC 309
consensus_9104#2      CACGAGATGATCCGGATGGTAG-CGATTCCCAGCCGCTCGTGCCAGCTT-CCACGAGCCC 300
consensus_9104#3      ------------------------------------------CCGATCTTCTAAAACCGG 18
                                                                **    * * *  * *  

consensus_9104#0      TCCTCAAAGTCCGCGCTGGTAAAGTCAAAGCTGTCGAACGGGTTCGCCGACTGTA-CCTC 521
consensus_9104#1      TCCTCAAAGTCCGCGCTGGTAAAGTCAAAGCTGTCGAACGGGTTCGCCGACTGTA-CCTC 368
consensus_9104#2      TCCTCAAAGTCCGCGCTGGTAAAGTCAAAGCTGTCGAACGGGTTCGCCGACTGTA-CCTC 359
consensus_9104#3      CCAGCAACCATCTCGCAGAAGGACTAAAAAT----GACCGATTCCGTTGTTTCCAACCGA 74
                       *  ***    * *** *    * * ***      ** **  * **  *  *  * **  

consensus_9104#0      CGGGACGGTCGTTTTCTGCGACTCTT-GCTGCAGCTTGCGCGCACCGGTCAGCGCGCGGT 580
consensus_9104#1      CGGGACGGTCGTTTTCTGCGACTCTT-GCTGCAGCTTGCGCGCACCGGTCAGCGCGCGGT 427
consensus_9104#2      CGGGACGGTCGTTTTCTGCGACTCTTTGCTGCAGCTTGCGCGCACCGGTCAGCGCGCGGT 419
consensus_9104#3      CACAAGGACTGTTTACCCTGTCGCCTAGTT--AGCGGGTTCGGTGTAATCGGCATGGGC- 131
                      *   * *   **** *   * * * * * *  ***  *  **      ** **  * *  

consensus_9104#0      ACTGGTCCGCGTTGTCCGTGTACTCGAGCCGGATCGCGTACAGCAGCAGCCACGTTACCT 640
consensus_9104#1      ACTGGTCCGCGTTGTCCGTGTACTCGAGCCGGATCGCGTACAGCAGCAGCCACGTTACCT 487
consensus_9104#2      ACTGGTCCGCGTTGTCCGTGTACTCGAGCCGGATCGCGTACAGCAGCAGCCACGTTACCT 479
consensus_9104#3      ----GTCTACATAG-CAGTGCAAGCACAGAAAAAAACGAAACCTCTTGGCCGCTTCACCA 186
                          ***  * * * * *** *  *       *   ** *        *** * * *** 

consensus_9104#0      GCTCCTGCTTCGACTTCAGGTGCTCCGGCACCTTGATGTCTTTCTTGTACTTTTCGTACG 700
consensus_9104#1      GCTCCTGCTTCGACTTCAGGTGCTCCGGCACCTTGATGTCTTTCTTGTACTTTTCGTACG 547
consensus_9104#2      GCTCCTGCTTCGACTTCAGGTGCTCCGGCACCTTGATGTCTTTCTTGTACTTTTCGTACG 539
consensus_9104#3      TGCTGGGCATTGCCGCCGTCGCCGGCAGTATAGGCATTGCACGCCTAGCCGATGTGTACC 246
                            ** * * *  *     *  * * *     **  *   * *   *  *  **** 

consensus_9104#0      CCCGGTTCCACTCGTCCGGTGCGTTTACCTTCCGCAGCGGTTCCCGCTCTTCGATCGGCA 760
consensus_9104#1      CCCGGTTCCACTCGTCCGGTGCGTTTACCTTCCGCAGCGGTTCCCGCTCTTCGATCGGCA 607
consensus_9104#2      CCCGGTTCCACTCGTCCGGTGAGTTTACCTTCCGCAGCGGTTCCCGCTCTTCGATCGGCA 599
consensus_9104#3      CCCTTTGGCGAAAGAGTG-CACAAATAGCTTTTTCAGTTTAAGTTGAGTTGAGTTTAGTA 305
                      ***  *  *    *   *       ** ***   ***        *   *  * *  * *

consensus_9104#0      GGAAGCGAATCTTCTGATCCTCCAGCCACATCATGAAGCAGCGGAAATCCTTCGGATCAT 820
consensus_9104#1      GGAAGCGAATCTTCTGATCCTCCAGCCACATCATGAAGCAGCGGAAATCCTTCGGATCAT 667
consensus_9104#2      GGAAGCGAATCTTCTGATCCTCCAGCCACATCATGAAGCAGCGGAAATCCTTCGGATCAT 659
consensus_9104#3      TTAAAATAAAA----GATCCTCCTTCCACCCCG--------------------------- 334
                        **   **      ********  ****  *                            

consensus_9104#0      CGATATTTAGCTGTCCTACGCGAGGATACTGAAGGGCTGTGAGATAACG-TTCGAACATA 879
consensus_9104#1      CGATATTTAGCTGTCCTACGCGAGGATACTGAAGGGCTGTGAGATAACG-TTCGAACATA 726
consensus_9104#2      CGATATTTAGCTGTCCTACGCGAGGATACTGAAGGGCTGTGAGATAACGGTTCGAACATA 719
consensus_9104#3      ------------------------------------------------------------
                                                                                  

consensus_9104#0      TCACTGGGGAGCGATTGATGTTTATCCTTTTTTTTCTTTTTCCTGATGGTATGGTGGAGA 939
consensus_9104#1      TCACTGGGGAGCAATTGATGTT-ATCCTTTTTCTTAACACCCTCGGCCGATTCTT----- 780
consensus_9104#2      TCACTGGGGAN---TCAAACCTCGTGCNCGATTCTG------------------------ 752
consensus_9104#3      ------------------------------------------------------------
                                                                                  

consensus_9104#0      TTGGCGTCCCCGCTTGTTTTTTCCAGTAG 968
consensus_9104#1      -----------------------------
consensus_9104#2      -----------------------------
consensus_9104#3      -----------------------------