cluster # 9106

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Anopheles gambiae
cluster # 9106 cluster # 9106 Sequences # 14 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9106#0 length = 1378 sequences # 8
consensus_9106#1 length = 712 sequences # 3

consensus_9106#2 length = 703 sequences # 2
consensus_9106#3 length = 676 sequences # 1

consensusID : consensus_9106#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1378
fasta sequence

                              [CCGCCCACGCGTCCGCCGTCATAT---CAAAAGCTCGTGAAGAGGTTCGTGCAACTTTTTCCGTTCGCAACAAAGAAGGGAGAGTAAGCCCGGAACTCCCCCCCACCCCACAGCGGACCGTAGTAAAACGGGAAAGAACCGTTCCCTTCGTTTTACTGCCCCGTTTCTAGGGCTTCCCGTGCAGCAACGTCCCCTGTGGTAAAGCATAAACAACGGCAGCACAATGCACAAGCTGGACGAGAATGCGCTGGCTCGTATGCTGTCCTCGTATCGAGATCCGACCACGACCAAAAAGGATGTCATGAACGCGTTGCGGATTTACCACGGATTGCAGCATCGGGTGGAAGAGTACGTGTTCAACGATGGCAGCACGAAGATGTTGCTCAACCTGCACGGCACCATACCGGTAAAGTATAAGGGCAACACGTACAACATACCCATCTGCATCTGGCTGATGGACACGCATCCGAAGAATGCCCCGATCTGCTACGTCAAACCGACGCCCGAAATGCGCATCAAGGTGTCTGCGTACGTGGATTTCAATGGAAAGATCTATTTGCCATACCTGCACGATTGGAATCCGAAAAATGCCGATCTGCTGGACCTGATTCAAATCATGAGCGTCACATTCGGCGAAGTGCCTCCGGTGTATTCGAAAGGACCAGAAACAACCTACCAGCCGCCGTCTTACATGCCACCGACGCCTGCCACCAGCACCTCATACAACCCACCGTACCCAACGCAACAGTTCACTCCATACCCGGTGCCGGGGCCAGGATATAATAGCTACGGACAGCCTGCACCCGGTGCTGCCGGGCCCGGATATGGAATGCCTTACGGAATGCCTCCCTACCCGCCGGCTCCT-GGGTCAATCTCAGGCCAAACACCAAGCGTGGGCACCGGAACCATCACAGAGGAACACATTCGTGCATCGCTCATCAGTGCCGTGGAGGATAAGCTGAAACGCCGGGTGCAGGAGAANGTCAATCAGTGTCAGGCGGAGGTGCAAACGCTGCGGCGAACTCAGCAGGAGCTGAACGAGGGCCAAGTTAAGATCAAGGAAATCATGTCCCGGCTCGAACGGGACGAAAAGGAGCTGACGAAGAGTATTACCGTGCTGAAGGACAAGGAGAATGAGCTGGAACGTGCGCTGGAATCGTTGGACAATGTGGAATCGATCGATGTCGATGAAGCAGTTACCACCACTGCCCCGCTATACAAGCAACTACTGAATGCCTACGCAGAGGAGGCCGCCATCGAAGATGCAACCTACTTCATGGGAGAAGCGCTTCGCAGCGGTGTGATCGATCTGGAGGTGTTCCTCAAGCAGATTCGGCAGCTGTCGCGGAAGCAGTTTATGTTGCGCGCGCTTATGCAGAAA]

[+] EMBL BM617438             [CCGCCCACGCGTCCGCCGTCATAT   CAAAAGCTCGTGAAGAGGTTCGTGCAACTTTTTCCGTTCGCAACAAAGAAGGGAGAGTAAGCCCGGAACT CCCCCCACCCTACGACGGTCCGTAGTAAAACGGGAAAGAACCGTTCCCTTCGTTTTACTGCTCCGTTTCTAGGGCTTCCCGTGCAGCAACGTCCCCTGTGGTAAAGCATAAACAACGGCAACACAATGCACAAGCTGGACGAGAATGCGCTGGCTCGTATGCTGTCCTCGTACCGAGATCCGACCACGACCAAAAAGGATGTGATGAACGCGTTGCGGATTTATCACGGATTGCAGCATCGGGTGGAAGAGTACGTGTTCAACGATGGCAGCACGAAGATGTTGCTCAATCTGCACGGCACCATACCGGTAAAGTATAAGGGCAACACGTACAACATACCCATCTGCATCTGGCTGATGGACACGCATCCGAAGAATGCCCCGATCTGCTACGTCAAACCGACGCCCGAAATGCGCATCAAGGTGTCTGCGTACGTGGATTTCAATGGAAAGATCTATTTGCCATACCTGCACGATTGGAATCCG AAAATGCCGATCTGCTGGACC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL BM619306             [CCGCCCACGCGTCCGCCCACGCGTCCGCAAAAGCTCGTGAAGAGGTTCGTGCAACTTTTTCCGTTCGCAACAAAGAAGGGAGAGTAAGCCCGGAACTCCCCCCCACCCCACAGCGGACCGTAGTAAAACGGGAAAGAACCGTTCCCTTCGTTTTACTGCCCCGTTTCTAGGGCTTCCCGTGCAGCAACGTCCCCTGTGGTAAAGCATAAACAACGGCAGCACAATGCACAAGCTGGACGAGAATGCGCTGGCTCGTATGCTGTCCTCGTATCGAGATCCGACCACGACCAAAAAGGATGTCATGAACGCGTTGCGGATTTACCACGGATTGCAGCATCGGGTGGAAGAGTACGTGTTCAACGATGGCAGCACGAAGATGTTGCTCAACCTGCACGGCACCATACCGGTAAAGTATAAGGGCAACACGTACAACATACCCATCTGCATCTGGCTGATGGACACGCATCCGAAGAATGCCCCGATCTGCTACGTCAAACCGACGCCCGAAATGCGCATCAAGGTGTCTGCGTACGTGGATTTCAATGGAAAGATCTATTTGCCATACCTGCACGATTGGAATCCGAAAAATGCCGATCTGCTGGACCTGATTCAAATCATGAGCGTCACATTCGGCGAAGTGCCTCCGGTGTATTCGAAAGGAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CNS08VLJ             [                                         GAGGTTCGTGCAATTTTTTCCGTTCGCAACAAAGAAGGGAGAGTAAGCCCGGAACTCCCCCCCACCCCACAGCGGACCGTAGTAAAACGGGAAAGAACCGTTCCCTTCGTTTTACTGCCCCGTTTCTAGGGCTTCCCGTGCAGCAACGTCCCCTGTGGTAAAGCATAAACAACGGCAGCACAATGCACAAGCTGGACGAGAATGCGCTGGCTCGTATGCTGTCCTCGTATCGAGATCCGACCACGACCAAAAAGGATGTCATGAACGCGTTGCGGATTTACCACGGATTGCAGCATCGGGTGGAAGAGTACGTGTTCAACGATGGCAGCACGAAGATGTTGCTCAACCTGCACGGCACCATACCGGTAAAGTATAAGGGCAACACGTACAACATACCCATCTGCATCTGGCTGATGGACACGCATCCGAAGAATGCCCCGATCTGCTACGTCAAACCGACGCCCGAAATGCGCATAAAAAAATCTGCGTACGTGGATTTCAATGGAAAGATCTATTTGCCATACCTGCACGATTGGAATCCGAAAAATGCCGATCTGCTGGACCTGATTCAAATCATGAGCGTCACATTCGGCGAAGTGCCTCCGGTGTATTCGAAAGGACCAGAAACAACCTACCAGCCGCCGTCTTACATGCCACCGGCGCCTGCCACCAGCACCTCATACAACCCACCGTACCCAACGCAACAGTTCACTCCATACCCGGTGCCGGGGCCAGGATATAATAGCTACGGACAGCCTGCACCCGGTGCTGCCGGGCCCGGATATGGAATGCCTTACGGAATGCCTCCCTACCCGCCGGCTCCTGGGGTCAATCTCAGGCCAAACACCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL BX627339             [                                                                                                                                                                                                                                                                                                                                      GATTGCAGCATCGGGTGGAAGAGTACGTGTTCAACGATGGCAGCACGAAGATGTTGCTCAACCTGCACGGCACCATACCGGTAAAGTATAAGGGCAACACGTACAACATACCCATCTGCATCTGGCTGATGGACACGCATCCGAAGAATGCCCCGATCTGCTACGTCAAACCGACGCCCGAAATGCGCATCAAGGTGTCTGCGTACGTGGATTTCAATGGAAAGATCTATTTGCCATACCTGCACGATTGGAATCCGAAAAATGCCGATCTGCTGGACCTGATTCAAATCATGAGCGTCACATTCGGCGAAGTGCCTCCGGTGTATTCGAAAGGACCAGAAACAACCTACCAGCCGCCGTCTTACATGCCACCGACGCCTGCCACCAGCACCTCATACAACCCACCGTACCCAACGCAACAGTTCACTCCATACCCGGTGCCGGGGCCAGGATATAATAGCTACGGACAGCCTGCACCCGGTGCTGCCGGGCCCGGATATGGAATGCCTTACGGAATGCCTCCCTACCCGCCGGCTCCT GGGTCAATCTCAGGCCAAACACCAAGCGTGGGCACCGGAACCATCACAGAGGAACACATTCGTGCATCGCTCATCAGTGCCGTGGAGGATAAGCTGAAACGCCGGGTGCAGGAGAANGTCAATCAGTGTCAGGCGGAGGTGCAAACGCTGCGGCGAACTCAGCAGG                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL BX623750             [                                                                                                                                                                                                                                                                                                                                                                                      AGATGTTGCTCAACCTGCACGGCACCATACCGGTAAAGTATAAGGGCAACACGTACAACATACCCATCTGCATCTGGCTGATGGACACGCATCCGAAGAATGCCCCGATCTGCTACGTCAAACCGACGCCCGAAATGCGCATCAAGGTGTCTGCGTACGTGGATTTCAATGGAAAGATCTATTTGCCATACCTGCACGATTGGAATCCGAAAAATGCCGATCTGCTGGACCTGATTCAAATCATGAGCGTCACATTCGGCGAAGTGCCTCCGGTGTATTCGAAAGGACCAGAAACAACCTACCAGCCGCCGTCTTACATGCCACCGACGCCTGCCACCAGCACCTCATACAACCCACCGTACCCAACGCAACAGTTCACTCCGTACCCGGTGCCGGGGCCAGGATATAATAGCTACGGACAGCCTGCACCCGGTGCTGCCGGGCCCGGATATGGAATGCCTTACGGAATGCCTCCCTACCCGCCGGCTCCT GGGTCAATCTCAGGCCAAACACCAAGCGTGGGCACTGGAACCATCACAGAGGAACACATTCGTGCATCGCTCATCAGTGCCGTGGAGGATAAGCTGAAACGCCGGGTGCANGAGAANGTCAATCAGTGTCAGGCGGAGGTGCAAACGCTGCGGCGAACTCAGCAGGAGCTGAACGAGGGCCAAGTTAAGATCAAGGAAATCANGTCCCGGCTCG                                                                                                                                                                                                                                                                                                              ]
[+] EMBL BX615853             [                                                                                                                                                                                                                                                                                                                                                                                                                                                    CCCATCTGCATCTGGCTGATGGACACGCATCCGAAGAATGCCCCGATCTGCTACGTCAAACCGACGCCCGAAATGCGCATCAAGGTGTCTGCGTACGTGGATTTCAATGGAAAGATCTATTTGCCATACCTGCACGATTGGAATCCGAAAAATGCCGATCTGCTGGACCTGATTCAAATCATGAGCGTCACATTCGGCGAAGTGCCTCCGGTGTATTCGAAAGGACCAGAAACAACCTACCAGCCGCCGTCTTACATGCCACCGACGCCTGCCACCAGCACCTCATACAACCCACCGTACCCAACGCAACAGTTCACTCCATACCCGGTGCCGGGGCCAGGATATAATAGCTACGGACAGCCTGCACCCGGTGCTGCCGGGCCCGGATATGGAATGCCTTACGGAATGCCTCCCTACCCGCCGGCTCCT GGGTCAATCTCAGGCCAAACACCAAGCGTGGGCACCGGAACCATCACAGAGGAACACATTCGTGCATCGCTCATCAGTGCCGTGGAGGATAAGCTGAAACGCCGGGTGCAGGA                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL BX610214             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         GCACCTCATACAACCCACCGTACCCAACGCAACAGTTCACTCCATACCCGGTGCCGGGGCCAGGATATAATAGCTACGGACAGCCTGCACCCGGTGCTGCCGGGCCCGGATATGGAATGCCTTACGGAATGCCTCCCTACCCGCCGGCTCCT GGGTCAATCTCAGGCCAAACACCAAGCGTGGGCACCGGAACCATCACAGAGGAACACATTCGTGCATCGCTCATCAGTGCCGTGGAGGATAAGCTGAAACGCCGGGTGCAGGAGAAGGTCAATCAGTGTCAGGCGGAGGTGCAAACGCTGCGGCGAACTCAGCAGGAGCTGAACGAGGGCCAAGTTAAGATCAAGGAAATCATGTCCCGGCTCGAACGGGACGAAAAGGAGCTGACGAAGAGTATTACCGTGCTGAAGGACAAGGAGAATGAGCTGGAACGTGCGCTGGAATCGTTGGACAATGTGGAATCGATCGATGTCGATGAAGCAGTTACCACCACTGCCCCGCTATACAAGCAACTACTGAATGCCTACGCAGAGGAGGCCGCCATCGAAGATGCAACCTACTTCATGGGAGAAGCGCTTCGCAGCGGTGTGATCGATCTGGAGGTGTTCCTCAAGCAGATTCGGCAGCTGT                                      ]
[+] EMBL BX618733             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TGCTGCCGGGCCCGGATATGGAATGCCTTACGGAATGCCTCCCTACCCGCCGGCTCCT GGGTCAATCTCAGGCCAAACACCAAGC   GGCACCGGAACCATCACAGAGGAACACATTCGTGCATCGCTCATCAGTGCCGTGGAGGATAAGCTGAAACGCCGGGTGCAGGAGAAGGTCAATCAGTGTCAGGCGGAGGTGCAAACGCTGCGGCGAACTCAGCAGGAGCTGAACGAGGGCCAAGTTAAGATCAAGGAAATCATGTCCCGGCTCGAACGGGACGAAAAGGAGCTGACGAAGAGTATTACCGTGCTGAAGGACAAGGAGAAGGAGCTGGAACGTGCGCTGGAATCGTTGGACAATGTGGAATCGATCGATGTCGATGAAGCAGTTACCACCACTGCCCCGCTATACAAGCAACTACTGAATGCCTACGCAGAGGAGGCCGCCATCGAAGATGCAACCTACTTCATGGGAGAAGCGCTTCGCAGCGGTGTGATCGATCTGGAGGTGTTCCTCAAGCAGATTCGGCAGCTGTCGCGGAAGCAGTTTATGTTGCGCGCGCTTATGCAGAAA]




>consensus_9106#0
CCGCCCACGCGTCCGCCGTCATATCAAAAGCTCGTGAAGAGGTTCGTGCAACTTTTTCCG
TTCGCAACAAAGAAGGGAGAGTAAGCCCGGAACTCCCCCCCACCCCACAGCGGACCGTAG
TAAAACGGGAAAGAACCGTTCCCTTCGTTTTACTGCCCCGTTTCTAGGGCTTCCCGTGCA
GCAACGTCCCCTGTGGTAAAGCATAAACAACGGCAGCACAATGCACAAGCTGGACGAGAA
TGCGCTGGCTCGTATGCTGTCCTCGTATCGAGATCCGACCACGACCAAAAAGGATGTCAT
GAACGCGTTGCGGATTTACCACGGATTGCAGCATCGGGTGGAAGAGTACGTGTTCAACGA
TGGCAGCACGAAGATGTTGCTCAACCTGCACGGCACCATACCGGTAAAGTATAAGGGCAA
CACGTACAACATACCCATCTGCATCTGGCTGATGGACACGCATCCGAAGAATGCCCCGAT
CTGCTACGTCAAACCGACGCCCGAAATGCGCATCAAGGTGTCTGCGTACGTGGATTTCAA
TGGAAAGATCTATTTGCCATACCTGCACGATTGGAATCCGAAAAATGCCGATCTGCTGGA
CCTGATTCAAATCATGAGCGTCACATTCGGCGAAGTGCCTCCGGTGTATTCGAAAGGACC
AGAAACAACCTACCAGCCGCCGTCTTACATGCCACCGACGCCTGCCACCAGCACCTCATA
CAACCCACCGTACCCAACGCAACAGTTCACTCCATACCCGGTGCCGGGGCCAGGATATAA
TAGCTACGGACAGCCTGCACCCGGTGCTGCCGGGCCCGGATATGGAATGCCTTACGGAAT
GCCTCCCTACCCGCCGGCTCCTGGGTCAATCTCAGGCCAAACACCAAGCGTGGGCACCGG
AACCATCACAGAGGAACACATTCGTGCATCGCTCATCAGTGCCGTGGAGGATAAGCTGAA
ACGCCGGGTGCAGGAGAANGTCAATCAGTGTCAGGCGGAGGTGCAAACGCTGCGGCGAAC
TCAGCAGGAGCTGAACGAGGGCCAAGTTAAGATCAAGGAAATCATGTCCCGGCTCGAACG
GGACGAAAAGGAGCTGACGAAGAGTATTACCGTGCTGAAGGACAAGGAGAATGAGCTGGA
ACGTGCGCTGGAATCGTTGGACAATGTGGAATCGATCGATGTCGATGAAGCAGTTACCAC
CACTGCCCCGCTATACAAGCAACTACTGAATGCCTACGCAGAGGAGGCCGCCATCGAAGA
TGCAACCTACTTCATGGGAGAAGCGCTTCGCAGCGGTGTGATCGATCTGGAGGTGTTCCT
CAAGCAGATTCGGCAGCTGTCGCGGAAGCAGTTTATGTTGCGCGCGCTTATGCAGAAA

consensusID : consensus_9106#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 712
fasta sequence

                              [TCAATTTCAGGCCAAACACCAAGCGTGGGCACCGGAACCATTACAGAGGGAAACATTCGTGCATCGCCAAACATTCGTGCACCCTCTGTTGTTGAATAACACGATCTCAGCATGCTGAAGTGGTTTAACATAACGCGCAGTCTGGCGCCTTTTGCACCGCGCCCCGTACGATGGTATTCGGATGCGGTTGTTGCCTCGACATCGCAGGCGGCGGTAGATCAGCCACCTCCGGTCGGCGTTCCGGATAAGCTGTACAGCCGGGTGGAGCTGCAAATGAAAGGAATCGATCCGGAGGTGATGAAGAGCTACGCTTTGTACGCCAAAACTGCCGCCGAACATCTTGACATTGAAGTTGGCAAGCACTGGACGCTAAGGAAAGCGGTGAAGGACCGTCTGACGCTGCTGAAATCGGTGCACATCTATAAGAAGCATCGCGTGCAGTACGAGGTGCGAAACTACTACAGATTCATGCATTTTCACAAGCTCACCGGCTCAACGCTGGACACGTTCCTGGAGTACATCGAGCGCAACCTGCCGGAGGGTATTGCGTTGAAGGTGACGAAGGTGGAGCTGCAGGAACTGCCGGAACATTTGCGAAAGTAGGAGAGAC-GGGCGTGGTGTGGTACGCGTAAAATAGTTATTAAACTGAACATTGCTGAATAGGAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCACATGTCCCCCCCCTGC]

[-] EMBL CNS08VLK             [TCAATTTCAGGCCAAACACCAAGCGTGGGCACCGGAACCATTACAGAGGGAAACATTCGTGCATCGCCAAACATTCGTGCACCCTCTGTTGTTGAATAACACGATCTCAGCATGCTGAAGTGGTTTAACATAACGCGCAGTTTTTTTTTTTTTGCCCCTCGCCCCGTACGATGGTATTCGGATGCGGTTGTTGCCTCGACATTGCAGGCGGCGGTAGTTCAGCCACCCCCGGTCGGCGTTCCGGATAAGCTGTACAGCCGGGTGGAGCTGCAAATGAAAGGAATCGATCCGGAGGTGATGAAGAG TACGCTTTGTACGCCAAAACTGCCGCCGAACATCTTGACATTGAAGTTGGCAAGCACTGGACGCTAAGGAAAGCGGTGAAGGACCCTCTGACGCTGCTGAAATCGGTGCACATCTATAAGAAGCATCGCGTGCAGTACGAGGTGCGAAACTACTACAGATTCATGCATTTTCACAAGCTGACCGGCTCAACGCTGGACACGTTCCTGGAGTACATCGAGCGCAACCTGCCGGAGGGTATTGCGTTGAAG                                                                                                                                                              ]
[+] EMBL CNS096ZY             [                                                                                                      GATTCCAGCATGCTGAAGTGGTTTAACATAACGCACAGTCTGGCGCCTCTTGCACCGCGTCCCGTTCGATGGTATTCGGATGCGGTTGTTGCCTCGACATCGCAGGCAGCGGTAGATCAGCCACCTCCGGTCGGCGTTCCGGATAAGCTGTACAGCCGGGTGGAGCTGCAAATGAAAGGAATCGATCCGGAGGTGATGAAGAGCTACGCTTTGTACGCCAAAACTGCCGCCGAACATCTTGACATTGAAGTTGGCAAGCACTGGACGCTAAGGAAAGCGGTGAAGGACCGTCTGACGCTGCTGAAATCGGTGCACATCTATAAGAAGCATCGCGTGCAGTACGAGGTGCGAAACTACTACCGATTCATGCATTTTCACAAGCTCACCGGCTCAACGCTGGACACGTTCCTGGAGTACATCGAGCGCAACCTGCCGGAGGGTATTGCGTTGAAGGTGACGAAGGTGGAGCTGCAGGAACTGCCGGAACATTTGCGAAAGTAGGAGAGAC GGGCGTGGTGTGGTACGCGTAAAATAGTTATTAAACTGAACATTGCTGAATAGGAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCACATGTCCCCCCCCTGC]
[+] EMBL BX615683             [                                                                                                                          GTTTAACATAACGCGCAGTCGGGCGCCTTTTGCGCCGCGCCCCGTACGATGGTATTCGGATGCGGTTGTTGCCTCGACATCGCAGGCGGCGGTAGATCAGCCACCTATGGTCGGCGTTCCGGATAAGCTGTACAGCCGGGTGGAGCTGCAAATGAAAGGAATCGATCCGGAGGTGATGAAGAGCTACGCTTTGTACGCCAAAACTGCCGCCGAACATCTTGACATTGAAGTTGGCAAGCACTGGACGCTAAGGAAAGCGGTGAAGGACCGTCTGACGCTGCTGAAATCGGTGCACATCTATAAGAAGCATCGCGTGCAGTACGAGGTGCGAAACTACTACAGATTCATGCATTTTCACAAGCTCACCGGCTCAACGCTGGACACGTTCCTGGAGTACATCGAGCGCAACCTGCCGGAGGGTATTGCGTTGAAGGTGACAAAGGTGGAGCTGCAGGAACTGCCGGAACACTTGCGAAAGTAGGAGAGACGGGGCGTGGTGTGGTGCGCGTAAAATAGTTATTAAATTGAACATT                                                          ]




>consensus_9106#1
TCAATTTCAGGCCAAACACCAAGCGTGGGCACCGGAACCATTACAGAGGGAAACATTCGT
GCATCGCCAAACATTCGTGCACCCTCTGTTGTTGAATAACACGATCTCAGCATGCTGAAG
TGGTTTAACATAACGCGCAGTCTGGCGCCTTTTGCACCGCGCCCCGTACGATGGTATTCG
GATGCGGTTGTTGCCTCGACATCGCAGGCGGCGGTAGATCAGCCACCTCCGGTCGGCGTT
CCGGATAAGCTGTACAGCCGGGTGGAGCTGCAAATGAAAGGAATCGATCCGGAGGTGATG
AAGAGCTACGCTTTGTACGCCAAAACTGCCGCCGAACATCTTGACATTGAAGTTGGCAAG
CACTGGACGCTAAGGAAAGCGGTGAAGGACCGTCTGACGCTGCTGAAATCGGTGCACATC
TATAAGAAGCATCGCGTGCAGTACGAGGTGCGAAACTACTACAGATTCATGCATTTTCAC
AAGCTCACCGGCTCAACGCTGGACACGTTCCTGGAGTACATCGAGCGCAACCTGCCGGAG
GGTATTGCGTTGAAGGTGACGAAGGTGGAGCTGCAGGAACTGCCGGAACATTTGCGAAAG
TAGGAGAGACGGGCGTGGTGTGGTACGCGTAAAATAGTTATTAAACTGAACATTGCTGAA
TAGGAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCACATGTCCCCCCCCTGC

consensusID : consensus_9106#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 703
fasta sequence

                              [CCGGCAAGTAGCAACCCGTCATATCAAAAGCTCGTGAAGAGGTTCGTGCAACTTTTTCCGTTCGCAACAAAGAAGGGAGAGTAAGCCCGGAACTCCCCCTACCCTACGACGGTCCGTAGTAAAACGGGAAAGAACCGTTCCCTTCGTTTTACTGCCCCGTTTCTAGGGCTTCCCGTGCAGCAACGTCCCCTGTGGTAAAGCATAAACAACGGCAGCACAATGCACAAGCTGGACGAGAATGCGCTGGCTCGTATGCTGTCCTCGTACCGAGATCCGACCACGACCAAAAAGGATGTCATGAACGCGTTGCGGATTTACCACGGTTTGCAGCATCGGGTGGAAGAGTACGTGTTCAACGATGGCAGCACGAAGATGTTGCTCAACCTGCACGGCACCATACCGGTAAAGTATAAGGGCAACACGTACAACATACCCATCTGCATCTGGCTGATGGACACGCATCCGAAGAATGCCCCGATCTGCTACGTCAAACCGACGCCCGAAATGCGCATCAAGGTGTCTGCGTACGTGGATTTCAATGGAAAGATCTATTTGCCATACCTGCACGATTGGAATCCGAAAAATGCCGATCTGCTGGACCTGATTCAAATCATGAGCGTCACATTCGGCGAAGTGCCTCCGGTGTATTCGAAAGGACCAGAAACAACCTACCAGCCGCCGTCTTACATGCCACCGACGCCTG]

[+] EMBL BM607918             [CCGGCAAGTAGCAACCCGTCATATCAAAAGCTCGTGAAGAGGTTCGTGCAACTTTTTCCGTTCGCAACAAAGAAGGGAGAGTAAGCCCGGAACTCCCCCTACCCTACGACGGTCCGTAGTAAAACGGGAAAGAACCGTTCCCTTCGTTTTACTGCCCCGTTTCTAGGGCTTCCCGTGCAGCAACGTCCCCTGTGGTAAAGCATAAACAACGGCAGCACAATGCACAAGCTGGACGAGAATGCGCTGGCTCGTATGCTGTCCTCGTACCGAGATCCGACCACGACCAAAAAGGATGTCATGAACGCGTTGCGGATTTACCACGGTTTGCAGCATCGGGTGGAAGAGTACGTGTTCAACGATGGCAGCACGAAGATGTTGCTCAACCTGCACGGCACCATACCGGTAAAGTATAAGGGCAACACGTACAACATACCCATCTGCATCTGGCTGATGGACACGCATCCGAAGAATGCCCCGATCTGCTACGTCAAACCGACGCCCGAAATGCGCATCAAGGTGTCTGCGTACGTGGATTTCAATGGAAAGATCTATTTGCCATACCTGCACGATTGGAATCCGAAAAATGCCGATCTGCTGGACCTGATTCAAATCATGAGCGTCACATTCGGCGAAGTGCCTCCGGTGTATTCGAAAGGACCAGAAACAACCTACCAGCCGCCGTCTTACATGCCACCGACGCCTG]
[+] EMBL BX605596             [                                                                                                                       TAAAACGGGAAAGAACCGTTCCCTTCGTTTTACTGCCCCGTTTCTAGGGCTTCCCGTGCAGCAACGTCCCCTGTGGTAAAGCATAAACAACGGCAGCACAATGCACAAGCTGGACGAGAATGCGCTGGCTCGTATGCTGTCCTCG                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]




>consensus_9106#2
CCGGCAAGTAGCAACCCGTCATATCAAAAGCTCGTGAAGAGGTTCGTGCAACTTTTTCCG
TTCGCAACAAAGAAGGGAGAGTAAGCCCGGAACTCCCCCTACCCTACGACGGTCCGTAGT
AAAACGGGAAAGAACCGTTCCCTTCGTTTTACTGCCCCGTTTCTAGGGCTTCCCGTGCAG
CAACGTCCCCTGTGGTAAAGCATAAACAACGGCAGCACAATGCACAAGCTGGACGAGAAT
GCGCTGGCTCGTATGCTGTCCTCGTACCGAGATCCGACCACGACCAAAAAGGATGTCATG
AACGCGTTGCGGATTTACCACGGTTTGCAGCATCGGGTGGAAGAGTACGTGTTCAACGAT
GGCAGCACGAAGATGTTGCTCAACCTGCACGGCACCATACCGGTAAAGTATAAGGGCAAC
ACGTACAACATACCCATCTGCATCTGGCTGATGGACACGCATCCGAAGAATGCCCCGATC
TGCTACGTCAAACCGACGCCCGAAATGCGCATCAAGGTGTCTGCGTACGTGGATTTCAAT
GGAAAGATCTATTTGCCATACCTGCACGATTGGAATCCGAAAAATGCCGATCTGCTGGAC
CTGATTCAAATCATGAGCGTCACATTCGGCGAAGTGCCTCCGGTGTATTCGAAAGGACCA
GAAACAACCTACCAGCCGCCGTCTTACATGCCACCGACGCCTG

consensusID : consensus_9106#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 676
fasta sequence

                              [CCGGAAATTGTGGCCCCAGACGAAGCCCTTTCTTGACGCGCTGCCTTCTTTTTCGCAGTATCGAGATCCGACCACGACCAAAAAGGATGTCATGAACGCGTTGCGGATTTACCACGGATTGCAGCATCGGGTGGAAGAGTACGTGTTCAACGATGGCAGCACGAAGATGTTGCTCAACCTGCACGGCACCATACCGGTAAAGTATAAGGGCAACACGTACAACATACCCATCTGCATCTGGCTGATGGACACGCATCCGAAGAATGCCCCGATCTGCTACGTCAAACCGACGCCCGAAATGCGCATCAAGGTGTCTGCGTACGTGGATTTCAATGGAAAGATCTATTTGCCATACCTGCACGATTGGAATCCGAAAAATGCCGATCTGCTGGACCTGATTCAAATCATGAGCGTCACATTCGGCGAAGTGCCTCCGGTGTATTCGAAAGGACCAGAAACAACCTACCAGCCGCCGTCTTACATGCCACCGACGCCTGCCACCAGCACCTCATACAACCCACCGTACCCAACGCAACAGTTCACTCCATACCCGGTGCCGGGGCCAGGATATAATAGCTACGGACAGCCTGCACCCGGTGCTGCCGGGCCCGGATATGGAATGCCTTACGGAATGCCTCCCTACCCGCCGGCTCCTGGGTCAATCTCAGGCCAAACA]

[+] EMBL BM578077             [CCGGAAATTGTGGCCCCAGACGAAGCCCTTTCTTGACGCGCTGCCTTCTTTTTCGCAGTATCGAGATCCGACCACGACCAAAAAGGATGTCATGAACGCGTTGCGGATTTACCACGGATTGCAGCATCGGGTGGAAGAGTACGTGTTCAACGATGGCAGCACGAAGATGTTGCTCAACCTGCACGGCACCATACCGGTAAAGTATAAGGGCAACACGTACAACATACCCATCTGCATCTGGCTGATGGACACGCATCCGAAGAATGCCCCGATCTGCTACGTCAAACCGACGCCCGAAATGCGCATCAAGGTGTCTGCGTACGTGGATTTCAATGGAAAGATCTATTTGCCATACCTGCACGATTGGAATCCGAAAAATGCCGATCTGCTGGACCTGATTCAAATCATGAGCGTCACATTCGGCGAAGTGCCTCCGGTGTATTCGAAAGGACCAGAAACAACCTACCAGCCGCCGTCTTACATGCCACCGACGCCTGCCACCAGCACCTCATACAACCCACCGTACCCAACGCAACAGTTCACTCCATACCCGGTGCCGGGGCCAGGATATAATAGCTACGGACAGCCTGCACCCGGTGCTGCCGGGCCCGGATATGGAATGCCTTACGGAATGCCTCCCTACCCGCCGGCTCCTGGGTCAATCTCAGGCCAAACA]




>consensus_9106#3
CCGGAAATTGTGGCCCCAGACGAAGCCCTTTCTTGACGCGCTGCCTTCTTTTTCGCAGTA
TCGAGATCCGACCACGACCAAAAAGGATGTCATGAACGCGTTGCGGATTTACCACGGATT
GCAGCATCGGGTGGAAGAGTACGTGTTCAACGATGGCAGCACGAAGATGTTGCTCAACCT
GCACGGCACCATACCGGTAAAGTATAAGGGCAACACGTACAACATACCCATCTGCATCTG
GCTGATGGACACGCATCCGAAGAATGCCCCGATCTGCTACGTCAAACCGACGCCCGAAAT
GCGCATCAAGGTGTCTGCGTACGTGGATTTCAATGGAAAGATCTATTTGCCATACCTGCA
CGATTGGAATCCGAAAAATGCCGATCTGCTGGACCTGATTCAAATCATGAGCGTCACATT
CGGCGAAGTGCCTCCGGTGTATTCGAAAGGACCAGAAACAACCTACCAGCCGCCGTCTTA
CATGCCACCGACGCCTGCCACCAGCACCTCATACAACCCACCGTACCCAACGCAACAGTT
CACTCCATACCCGGTGCCGGGGCCAGGATATAATAGCTACGGACAGCCTGCACCCGGTGC
TGCCGGGCCCGGATATGGAATGCCTTACGGAATGCCTCCCTACCCGCCGGCTCCTGGGTC
AATCTCAGGCCAAACA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9106#0      CCGCCCACGCGTCCGCCGTCATATCAAAAGCTCGTGAAGAGGTTCGTGCAACTTTTTCCG 60
consensus_9106#2      CCGGCAAGTAGCAACCCGTCATATCAAAAGCTCGTGAAGAGGTTCGTGCAACTTTTTCCG 60
consensus_9106#3      ------------------------------------------------------------
consensus_9106#1      ------------------------------------------------------------
                                                                                  

consensus_9106#0      TTCGCAACAAAGAAGGGAGAGTAAGCCCGGAACTCCCCCCCACCCCACAGCGGACCGTAG 120
consensus_9106#2      TTCGCAACAAAGAAGGGAGAGTAAGCCCGGAACTCCCCCT-ACCCTACGACGGTCCGTAG 119
consensus_9106#3      ------------------------------------------------------------
consensus_9106#1      ------------------------------------------------------------
                                                                                  

consensus_9106#0      TAAAACGGGAAAGAACCGTTCCCTTCGTTTTACTGCCCCGTTTCTAGGGCTTCCCGTGCA 180
consensus_9106#2      TAAAACGGGAAAGAACCGTTCCCTTCGTTTTACTGCCCCGTTTCTAGGGCTTCCCGTGCA 179
consensus_9106#3      ------------------------------------------------------------
consensus_9106#1      ------------------------------------------------------------
                                                                                  

consensus_9106#0      GCAACGTCCCCTGTGGTAAAGCATAAACAACGGCAGCACAATGCACAAGCTGGACGAGAA 240
consensus_9106#2      GCAACGTCCCCTGTGGTAAAGCATAAACAACGGCAGCACAATGCACAAGCTGGACGAGAA 239
consensus_9106#3      -----------------------CCGGAAATTGTGGCCCCAGACG-AAGCCCTTTCTTGA 36
consensus_9106#1      -----------TCAATTTCAGGCCAAACACCAAGCGTGGGCACCGGAACCATTACAGAGG 49
                                                  *      *       *  ** *          

consensus_9106#0      TGCGCTGGCTCGTATGCTGTCCTCGTATCGAGATCCGACCACGACCAAAAAGGATGTCAT 300
consensus_9106#2      TGCGCTGGCTCGTATGCTGTCCTCGTACCGAGATCCGACCACGACCAAAAAGGATGTCAT 299
consensus_9106#3      CGCGCTGCCTTCT---TTTTCGCAGTATCGAGATCCGACCACGACCAAAAAGGATGTCAT 93
consensus_9106#1      GAAAC--ATTCGTGCATCGCCAAACATTCGTGCACCCTCTGTTGTTGAATAACACGATCT 107
                          *    *  *       *       ** *  **  *        ** *  * *   *

consensus_9106#0      GAACGCGTTGCGG--ATTTACCACGGATTGCAGCATCGGG--TGGAAGAGTACGTGTTCA 356
consensus_9106#2      GAACGCGTTGCGG--ATTTACCACGGTTTGCAGCATCGGG--TGGAAGAGTACGTGTTCA 355
consensus_9106#3      GAACGCGTTGCGG--ATTTACCACGGATTGCAGCATCGGG--TGGAAGAGTACGTGTTCA 149
consensus_9106#1      CAGCATGCTGAAGTGGTTTAACATAACGCGCAGTCTGGCGCCTTTTGCACCGCGCCCCGT 167
                       * *  * **  *   **** **      ****  * * *  *     *   **      

consensus_9106#0      ACGATGGCAGCACGAAGATGTTGCTCAACCTGCACGGCACCATACCGGTAAAGTA--TAA 414
consensus_9106#2      ACGATGGCAGCACGAAGATGTTGCTCAACCTGCACGGCACCATACCGGTAAAGTA--TAA 413
consensus_9106#3      ACGATGGCAGCACGAAGATGTTGCTCAACCTGCACGGCACCATACCGGTAAAGTA--TAA 207
consensus_9106#1      ACGATGGTATTCGGATGCGGTTGTTGCCTCGACATCGCAG-GCGGCGGTAGATCAGCCAC 226
                      ******* *    ** *  **** *    *  **  ***      ***** *  *   * 

consensus_9106#0      GGGCAACACGTACAACATACCCATCTGCATCTGGCTGATGGACACGCATCCGAAGAATGC 474
consensus_9106#2      GGGCAACACGTACAACATACCCATCTGCATCTGGCTGATGGACACGCATCCGAAGAATGC 473
consensus_9106#3      GGGCAACACGTACAACATACCCATCTGCATCTGGCTGATGGACACGCATCCGAAGAATGC 267
consensus_9106#1      CTCCGGTCGGCGTTCCGGATA-AGCTGTA-CAGCCGGGTGGAGCTGCAAATGAAAGGAAT 284
                         *     *     *  *   * *** * * * * * ****   ***   ***      

consensus_9106#0      CCCGATCTGCTACGTCAAACCGACGCCCGAAATGCGCATCAAGGTGTCTGCGTACGTGGA 534
consensus_9106#2      CCCGATCTGCTACGTCAAACCGACGCCCGAAATGCGCATCAAGGTGTCTGCGTACGTGGA 533
consensus_9106#3      CCCGATCTGCTACGTCAAACCGACGCCCGAAATGCGCATCAAGGTGTCTGCGTACGTGGA 327
consensus_9106#1      C--GATCCGG-AGGTGATGAAGAGCTACGCTTTGTACGCCAAAA---CTGCCGCCGAACA 338
                      *  **** *  * ** *    **    **   **  *  ***     ****   **   *

consensus_9106#0      TTTCAATGGAAAGATCTATTTGCCATACCTGCACGATTGGAATCCGAAAAATGCCGATCT 594
consensus_9106#2      TTTCAATGGAAAGATCTATTTGCCATACCTGCACGATTGGAATCCGAAAAATGCCGATCT 593
consensus_9106#3      TTTCAATGGAAAGATCTATTTGCCATACCTGCACGATTGGAATCCGAAAAATGCCGATCT 387
consensus_9106#1      TCTTGACATTGAAGT----TGGCAAGCACTGGACGCTAAGGA---AAGCGGTGAAGGACC 391
                      * *  *     *  *    * ** *   *** *** *  * *    *    **  *  * 

consensus_9106#0      GCTGGACCTGATTCAAATCATGAGCGTCACATTCGGCGAAGTGCCTCCGGTGTATTCGAA 654
consensus_9106#2      GCTGGACCTGATTCAAATCATGAGCGTCACATTCGGCGAAGTGCCTCCGGTGTATTCGAA 653
consensus_9106#3      GCTGGACCTGATTCAAATCATGAGCGTCACATTCGGCGAAGTGCCTCCGGTGTATTCGAA 447
consensus_9106#1      GTCTGACGCTGCTGAAATCG---GTG-CACATCTA-TAAGAAGCATCGCGTGCAGTACGA 446
                      *   ***     * *****    * * *****      *   ** **  *** * *   *

consensus_9106#0      AGGACCAGAA-ACAACCTACCAGCCGCCGTCTTACATGC-CACCGACGCCTGCCACCAGC 712
consensus_9106#2      AGGACCAGAA-ACAACCTACCAGCCGCCGTCTTACATGC-CACCGACGCCTG-------- 703
consensus_9106#3      AGGACCAGAA-ACAACCTACCAGCCGCCGTCTTACATGC-CACCGACGCCTGCCACCAGC 505
consensus_9106#1      GGTGCGAAACTACTACAGATTCAT-GCATTTTCACAAGCTCACCGGC-TCAACGCTGGAC 504
                       *  * * *  ** **  *      **  * * *** ** ***** *  *          

consensus_9106#0      AC-CTCATACAACCCACCGTACCCAAC--GCAACAGTTCACTCCATACCCGGTGCCGGGG 769
consensus_9106#2      ------------------------------------------------------------
consensus_9106#3      AC-CTCATACAACCCACCGTACCCAAC--GCAACAGTTCACTCCATACCCGGTGCCGGGG 562
consensus_9106#1      ACGTTCCTGGAGTACATCGAGCGCAACCTGCCGGAGGGTATTGCGTTGAAGGTGACGAAG 564
                                                                                  

consensus_9106#0      CCAGGA-TATAATAGCTAC-GGACAGCCTGC--ACCCGGTGCTGCCGGGCCCGGATATGG 825
consensus_9106#2      ------------------------------------------------------------
consensus_9106#3      CCAGGA-TATAATAGCTAC-GGACAGCCTGC--ACCCGGTGCTGCCGGGCCCGGATATGG 618
consensus_9106#1      GTGGAGCTGCAGGAACTGCCGGAACATTTGCGAAAGTAGGAGAGACGGGCGTGG-TGTGG 623
                                                                                  

consensus_9106#0      AATGCCTTACGGAATGCCTCC-CTACCCGCCGGCTCCTGGGTCAATCTCAGGCCAAACAC 884
consensus_9106#2      ------------------------------------------------------------
consensus_9106#3      AATGCCTTACGGAATGCCTCC-CTACCCGCCGGCTCCTGGGTCAATCTCAGGCCAAACA- 676
consensus_9106#1      TACGCGTAAAATAGTTATTAAACTGAACATTGCTGAATAGGAAAAAAAAAAAAAAAAAAA 683
                                                                                  

consensus_9106#0      CAAGCGTGGGCACCGGAACCATCACAGAGGAACACATTCGTGCATCGCTCATCAGTGCCG 944
consensus_9106#2      ------------------------------------------------------------
consensus_9106#3      ------------------------------------------------------------
consensus_9106#1      AAAAAAAAGGCCACATGTCCCCCCCCTGC------------------------------- 712
                                                                                  

consensus_9106#0      TGGAGGATAAGCTGAAACGCCGGGTGCAGGAGAANGTCAATCAGTGTCAGGCGGAGGTGC 1004
consensus_9106#2      ------------------------------------------------------------
consensus_9106#3      ------------------------------------------------------------
consensus_9106#1      ------------------------------------------------------------
                                                                                  

consensus_9106#0      AAACGCTGCGGCGAACTCAGCAGGAGCTGAACGAGGGCCAAGTTAAGATCAAGGAAATCA 1064
consensus_9106#2      ------------------------------------------------------------
consensus_9106#3      ------------------------------------------------------------
consensus_9106#1      ------------------------------------------------------------
                                                                                  

consensus_9106#0      TGTCCCGGCTCGAACGGGACGAAAAGGAGCTGACGAAGAGTATTACCGTGCTGAAGGACA 1124
consensus_9106#2      ------------------------------------------------------------
consensus_9106#3      ------------------------------------------------------------
consensus_9106#1      ------------------------------------------------------------
                                                                                  

consensus_9106#0      AGGAGAATGAGCTGGAACGTGCGCTGGAATCGTTGGACAATGTGGAATCGATCGATGTCG 1184
consensus_9106#2      ------------------------------------------------------------
consensus_9106#3      ------------------------------------------------------------
consensus_9106#1      ------------------------------------------------------------
                                                                                  

consensus_9106#0      ATGAAGCAGTTACCACCACTGCCCCGCTATACAAGCAACTACTGAATGCCTACGCAGAGG 1244
consensus_9106#2      ------------------------------------------------------------
consensus_9106#3      ------------------------------------------------------------
consensus_9106#1      ------------------------------------------------------------
                                                                                  

consensus_9106#0      AGGCCGCCATCGAAGATGCAACCTACTTCATGGGAGAAGCGCTTCGCAGCGGTGTGATCG 1304
consensus_9106#2      ------------------------------------------------------------
consensus_9106#3      ------------------------------------------------------------
consensus_9106#1      ------------------------------------------------------------
                                                                                  

consensus_9106#0      ATCTGGAGGTGTTCCTCAAGCAGATTCGGCAGCTGTCGCGGAAGCAGTTTATGTTGCGCG 1364
consensus_9106#2      ------------------------------------------------------------
consensus_9106#3      ------------------------------------------------------------
consensus_9106#1      ------------------------------------------------------------
                                                                                  

consensus_9106#0      CGCTTATGCAGAAA 1378
consensus_9106#2      --------------
consensus_9106#3      --------------
consensus_9106#1      --------------