cluster # 9116

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Anopheles gambiae
cluster # 9116 cluster # 9116 Sequences # 14 consensus # 5

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9116#0 length = 1488 sequences # 7
consensus_9116#1 length = 970 sequences # 2

consensus_9116#2 length = 906 sequences # 3
consensus_9116#3 length = 861 sequences # 1
consensus_9116#4 length = 490 sequences # 1

consensusID : consensus_9116#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1488
fasta sequence

                              [CCGCCCACGCGTCCGGGAGCCGCAAAAAAACAACAAACCCAGGCAAAGTGCAACCAAAACCCTCGGAATGTCCACCCTAACGCGTCCAAAATCCCCCCGAACTCCCACTTCCGGGCGGGCCGATAAGGAGGAAAGCATCTGGGACAAAATTGGAACGCTGGGAAGGAAG-AAGCGCATAAAGGAAGTGCAAGAAATCCAGGAGGAGGGTAAGATTGCGATCGACTCCCCCGGCAGCCCGAATGCACCGATCATCCCGCCGGAGGACTACAACCTGGAGGACAATGAATCTCGCTCGATCATTCAGCCTGCCTCGCTGCAGATGCCAAAGGTGAAGGAGCTGCTGCAGGTGCTGATCGACTGGATCAACGACGAGCTGGTGGAGGAGCGAATCATCGTCACCAACATCGAGGAGGATCTGTACGACGGCCAGGTGCTGCAGAAGCTGTGGGAAAAGCTGTCCAACAACAAGCTGAACGTACCGGAAGTGACCCAGTCGGCGGAAGGCCAGCGCCAGAAGCTGTCTGTCGTGCTGAATGCG-GTGAATCATACGCTCGGTTACCATCACAACACCCCAAAGTGGACGGT-GGAAAGCATACACACGAAGAACATTGTGTCGATCTTGCATTTGCTCGTTGCGCTGGTGCGCCATTACCGTGCCCCGATCCGGCTGCCCGACAACGTGTTCGTGACGGTCGTGATGGTGCAGAAGCTGAACGGAAAGCTCACCAGCCAGCGGTTCCA-GGAGCAGATTACCCAATCGTACGATGACGTTGGCATGCGGTGCGAACCGGACGCGTTCGATACGCTGTTCGACCATGCGCCGGACAAGCTGAAGGTGGTGCAGCGTTCGCTGATCTCGTTCGTGAACAAGCACCTGAACAAGCTGAACTTCGAGGCGGCCGACCTGAACACGGACTTTAAGGACGGTGTGTTTCTGTGTCTGCTGATGGGGCTGCTGGGTGGATTTTTCGTACC-CTGCACGATTTCCACCTCACGCCAAAGGACGCCGATCAGATGACGCACAACGTGGCGTTCGCGTTCGAGCTGATGATGGACCAGGGCCTGAGACCGAAGGCAAGGCCGGAGGATATCGTTAATATGGATTTGAAGTCCACGCTCCGGGTGCTGTACACACTGTTCACGAAGTACCGCAACAATCCGTGAACGCGCCGTGACAGGGACCGATGGAAAGATGAAGCGTTTAGCGCCCGTTACTCGACAGCTAATCCCAATGTGCCTTCCGTTTTTTGTTTCTATAACTGTTGTGTGCTGTGCTGCAACACGTGTGGTACGAGTATAGAGAGTATTAACATAGGAAAACTAATTACCCGATCAATGTCCCGACGAGAAGTGCTAAAAGAGAGAGGAAGAGAATATGTGTGTTTGTGCCTTCAGTCAGTGTTTTTTTACAACTTAACTAGTAATTATTAAATCCATAACAATCGATGTTTGCTAACGTTTGCTGGTGAAATAAAACGTTAACGCGGG]

[+] EMBL BM587460             [CCGCCCACGCGTCCGGGAGAAACAAAAAAACAACAAACCCAGGCAAAGTGCAACCAAAACCCTCGGAATGTCCACCCTAACGCGTCCGAAATCCCCCCGAACTCCCACTTCCGGGCGGGCCGATAAGGAGGAAAGCATCTGGGACAAAATTGGAACGCTGGGAAGGAAG AAGCGCATAAAGGAAGTGCAAGAAATCCAGGAGGAGGGTAAGATTGCGATCGACTCCCCCGGCAGCCCGAATGCACCGATCATCCCGCCGGAGGACTACAACCTGGAGGACAATGAATCTCGCTCGATCATTCAGCCTGCCTCGCTGCAGATGCCAAAGGTGAAGGAGCTGCTGCAGGTGCTGATCGACTGGATCAACGACGAGCTGGTGGAGGAGCGAATCATCGTCACCAACATCGAGGAGGATCTGTACGACGGCCAGGTGCTGCAGAAGCTGTGGGAAAAGCTGTCCAACAACAAGCTGAACGTACCGGAAGTGACCCAGTCGGCGGAAGGCCAGCGCCAGAAGCTGTCTGTCGTGCTGAATGCG GTGAATCATACGCTCGGTTACCATCACAACACCCCAAAGTGGACGGT GGAAAGCATACACACGAAGAACATTGTGTCGATCTTGCATTTGCTCGTTGCGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL BM638848             [                   CCGCAAAAAAACAACAAACCCAGGCAAAGTGCAACCAAAACCCTCGGAATGTCCACCCTAACGCGTCCAAAATCCCCCCGAACTCCCACTTCCGGGCGGGCCGATAAGGAGGAAAGCATCTGGGACAAAATTGGAACGCTGGGAAGGAAG AAGCGCATAAAGGAAGTGCAAGAAATCCAGGAGGAGGGTAAGATTGCGATCGACTCCCCCGGCAGCCCGAATGCACCGATCATCCCGCCGGAGGACTACAACCTGGAGGACAATGAATCTCGCTCGATCATTCAGCCTGCCTCGCTGCAGATGCCAAAGGTGAAGGAGCTGCTGCAGGTGCTGATCGACTGGATCAACGACGAGCTGGTGGAGGAGCGAATCATCGTCACCAACATCGAGGAGGATCTGTACGACGGCCAGGTGCTGCAGAAGCTGTGGGAAAAGCTGTCCAACAACAAGCTGAACGTACCGGAAGTGACCCAGTCGGCGGAAGGCCAGCGCCAGAAGCTGTCTGTCGTGCTGAATGCG GTGAATCATACGCTCGGTTACCATCACAACACCCCAAAGTGGACGGTGGGAAAGCATACACACGAAGAACATTGTGTCGATCTTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL BM587921             [                   CCG AAAAAAACAACAAACCCAGGCAAAGTGCAACCAAAACCCTCGGAATGTCCACCCTAACGCGTCCAAAATCCCCCCGAACTCCCACTTCCGGGCGGGCCGATAAGGAGGAAAGCATCTGGGACAAAATTGGAACGCTGGGAAGGAAG AAGCGCATAAAGGAAGTGCAAGAAATCCAGGAGGAGGGCAAGATTGCGATCGACTCCCCCGGCAGCCCGAATGCACCGATCATCCCGCCGGAGGACTACAACCTGGAGGACAATGAATCTCGCTCGATCATTCAGCCTGCCTCGCTGCAGATGCCAAAGGTGAAGGAGCTGCTGCAGGTGCTGATCGACTGGATCAACGACGAGCTGGTGGAGGAGCGAATCATCGTCACCAACATCGAGGAAGATCTGTACGACGGCCAGGTGCTGCAGAAGCTGTGGGAAAAGCTGTCCAACAACAAGCTGAACGTGCCGGAAGTGACCCAGTCGGCGGAAGGCCAGCGCCAGAAGCTGTCCGTCGTGCTGAATGCG GTGAATCATACGCTCGGCTACCATCACAACACCCCAAAGTGGACGGT GGAAAGCATACACACGAAGAACATTGTGTCGATCTTGCATTTGCTCGTTGCGCTGGTGCGCCATTACCGTGCCCCGATCCGGCTGCCCGACAACGTGTTCGTGACGGTCGTGATGGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL BX623773             [                                                                           CCTAACGCGTCCAAAATCCCCCCGAACTCCCACTTCCGGGCGGGCCGATAAGGAGGAAAGCATCTGGGACAAAATTGGAACGCTGGGAAGGAAG AAGCGCATAAAGGAAGTGCAAGAAATCCAGGAGGAGGGTAAGATTGCGATCGACTCCCCCGGCAGCCCGAATGCACCGATCATCCCGCCGGAGGACTACAACCTGGAGGACAATGAATCTCGCTCGATCATTCAGCCTGCCTCGCTGCAGATGCCAAAGGTGAAGGAGCTGCTGCAGGTGCTGATCGACTGGATCAACGACGAGCTGGTGGAGGAGCGAATCATCGTCACCAACATCGAGGAGGATCTGTACGACGGCCAGGTGCTGCAGAAGCTGTGGGAAAAGCTGTCCAACAACAAGCTGAACGTACCGGAAGTGACCCAGTCGGCGGAAGGCCAGCGCCAGAAGCTGTCTGTCGTGCTGAATGCG GTGAATCATACGCTCGGTTACCATCACAACACCCCAAAGTGGACGGT GGAAAGCATACACACGAAGAACATTGTGTCGATCTTGCATTTGCTCGTTGCGCTGGTGCGCCATTACCGTGCCCCGATCCGGCTGCCCGACAACGTGTTCGTGACGGTCGTGATGGTGCAGAAGCTGAACGGAAAGCTCACCAGCCAGCGGTTCCA GGAGCAGATTACCCAATCGTACGATGACGTTGGCATGCGGTGCGAACCGGACGCGTTCGATACGCTGTTCGACCATGCGCCGGACAAGCTGAAGGNGGTGCAGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CNS08DLD             [                                                                                  CGTCCAATATCCCCCCGAACTCCCACTTCCGGGCGGGCCGATAAGGAGGAAAGCATCTGGGACAAAATTGGAACGCTGGGAAGGAAGTAAGCGCATAAAGGAAGTGCAAGAAATCCAGGAGGAGGGCAAGATTGCGATCGACTCCCCCGGCAGCCCGAATGCACCGATCATCCCGCCGGAGGACTACAACCTGGAGGACAATGAATCTCGCTCGATCATTCAGCCTGCCTCGCTGCAGATGCCAAAGGTGAAGGAGCTGCTGCAGGTGCTGATCGACTGGATCAACGACGAGCTGGTGGAGGAGCGAATCATCGTCACCAACATCGAGGAAGATCTGTACGACGGCCAGGTGCTGTTTTTGCTGTGGGAAAAGCTGTCCAACAACAAGCTGAACGTGCCGGAAGTGACCCAGTCAGCAGAAGGCCAGCGCCAGAAGCTGTCCGTCGTGCTGAATGCGCGTGAATCATACGCTCGGCTACCATCACAACACCCCAAAGTGGACGGT GGAAAGCATACACACGAAGAACATTGTGTCGATCTTGCATTTGCTCGTTGCGCTGGTGCGCCATTACCGAGCCCCGATCCGGCTGCCCGACAACGTGTTCGTGACGGTCGTGATGGTGCAGAAGCTGAACGGAAAGCTCAAAAGCCAGCGGTTCCAGGGGGCAGATTACCCAATCGTACGATGACGTTGGCATGCGGTGCGAACCGGACGCGTTCGATACGCTGTTCGACCATGCGCCGGACAAGCTGAAGGTGGTGCAGCGTTCGCTGATCTCGTTCGTGAACAAGCACCTGAACAAGCTGAACTTCGAGGCGGCCGACCTGAACACGGACTTTAAGGACGGTGTGTTTCTGTGTCTGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL BX609102             [                                                                                                                                                                                                                                                                                                                               GATGCCAAAGGTGAAGGAGCTGCTGCAGGTGCTGATCGACTGGATCAACGACGAGCTGGTGGAGGAGCGAATCATCGTCACCAACATCGAGGAGGATCTGTACGACGGCCAGGTGCTGCAGAAGCTGTGGGAAAAGCTGTCCAACAACAAGCTGAACGTACCGGAAGTGACCCAGTCGGCGGAAGGCCAGCGCCAGAAGCTGTCTGTCGTGCTGAATGCG GTGAATCATACGCTCGGTTACCATCACAACACCCCAAAGTGGACGGT GGAAAGCATACACACGAAGAACATTGTGTCGATCTTGCATTTGCTCGTTGCGCTGGTGCGCCATTACCGTGCCCCGATCCGGCTGCCCGACAACGTTTTCGTGACGGTCGTGATGGTGCAGAAGCTGAACGGAAAGCTCACCAGCCAGCGGTTCCA GGAGCAGATTACCCAATCGTACGATGACGTTGGCATGCGGTGCGAACCGGACGCGTTCGATACGCTGTTCGACCATGCGCCGGACAAGCTGAAGGTGGTGCAGCGTTCGCTGATCTCGTTCGTGAACAAGCACCTGAACAAGCTGAACTTCGAGGCGGCCGACCTGAACACGGACTTTAAGGACGGTGTGTTTCTGTGTCTGCTGATGGGGCTGCTGGGTGGATTTTTCGTACC CTGCACGATTTCCACCTCACGCCAAAGGACGCCGATCAGATGACGCACAACGTGGCGTTCGCGTTCGAGCTGATGATGGACCAGGGCCTGAGACCGAAGGCAAGGCCGGAGGATATCGTTAATATGGATTTGAAGTCCACGCTCCGGGTGCTGTACACACTG                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL CNS08DLE             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ACACGAAGAACATTGTGTCGATCTTGCATTTGCTCGTTGCGCTGGTGCGCCATTACCGAGCCCCGATCCGGCTGCCCGACAACGTGTTCGTGACGGTCGTGATGGTGCAGAAGCTGAACGGAAAGCTCACCAGCCAGCGGTTCCA GGAGCAGATTACCCAATCGTACGATGACGTTGGCATGCGGTGCGAACCGGACGCGTTCGATACGCTGTTTTTTTATGCGCCGGACAAGCTGAAGGTGGTGCAGCGTTCGCTGATCTCGTTCGTGAACAAGCACCTGAACAAGCTGAACTTCGAGGCGGCCGACCTGAACACGGACTTTAAGGACGGTGTGTTTCTGTGTCTGCTGATGGGGCTGCTGGGTGGATTTTTCGTACCGCTGCACGATTTCCACCTCACGCCAAAGGACGCCGATCAGATGACGCACAACGTGGCGTTCGCGTTCGAGCTGATGATGGACCAGGGCCTGAGACCGAAGGCAAGGCCGGAGGATATCGTTAATATGGAAAAAAAGTCCACGCTCCGGGTGCTGTACACACTGTTCACGAAGTACCGCAACAATCCGTGAACGCGCCGTGACAGGGACCGATGGAAAGATGAAGCGTTTAGCGCCCGTTACTCGACAGCTAATCCCAATGTGCCTTCCGTTTTTTGTTTCTATAACTGTTGTGTGCTGTGCTGCAACACGTGTGGTACGAGTATAGAGAGTATTAACATAGGAAAACTAATTACCCGATCAATGTCCCGACGAGAAGTGCTAAAAGAGAGAGGAAGAGAATATGTGTGTTTGTGCCTTCAGTCAGTGTTTTTTTACAACTTAACTAGTAATTATTAAATCCATAACAATCGATGTTTGCTAACGTTTGCTGGTGAAATAAAACGTTAACGCGGG]




>consensus_9116#0
CCGCCCACGCGTCCGGGAGCCGCAAAAAAACAACAAACCCAGGCAAAGTGCAACCAAAAC
CCTCGGAATGTCCACCCTAACGCGTCCAAAATCCCCCCGAACTCCCACTTCCGGGCGGGC
CGATAAGGAGGAAAGCATCTGGGACAAAATTGGAACGCTGGGAAGGAAGAAGCGCATAAA
GGAAGTGCAAGAAATCCAGGAGGAGGGTAAGATTGCGATCGACTCCCCCGGCAGCCCGAA
TGCACCGATCATCCCGCCGGAGGACTACAACCTGGAGGACAATGAATCTCGCTCGATCAT
TCAGCCTGCCTCGCTGCAGATGCCAAAGGTGAAGGAGCTGCTGCAGGTGCTGATCGACTG
GATCAACGACGAGCTGGTGGAGGAGCGAATCATCGTCACCAACATCGAGGAGGATCTGTA
CGACGGCCAGGTGCTGCAGAAGCTGTGGGAAAAGCTGTCCAACAACAAGCTGAACGTACC
GGAAGTGACCCAGTCGGCGGAAGGCCAGCGCCAGAAGCTGTCTGTCGTGCTGAATGCGGT
GAATCATACGCTCGGTTACCATCACAACACCCCAAAGTGGACGGTGGAAAGCATACACAC
GAAGAACATTGTGTCGATCTTGCATTTGCTCGTTGCGCTGGTGCGCCATTACCGTGCCCC
GATCCGGCTGCCCGACAACGTGTTCGTGACGGTCGTGATGGTGCAGAAGCTGAACGGAAA
GCTCACCAGCCAGCGGTTCCAGGAGCAGATTACCCAATCGTACGATGACGTTGGCATGCG
GTGCGAACCGGACGCGTTCGATACGCTGTTCGACCATGCGCCGGACAAGCTGAAGGTGGT
GCAGCGTTCGCTGATCTCGTTCGTGAACAAGCACCTGAACAAGCTGAACTTCGAGGCGGC
CGACCTGAACACGGACTTTAAGGACGGTGTGTTTCTGTGTCTGCTGATGGGGCTGCTGGG
TGGATTTTTCGTACCCTGCACGATTTCCACCTCACGCCAAAGGACGCCGATCAGATGACG
CACAACGTGGCGTTCGCGTTCGAGCTGATGATGGACCAGGGCCTGAGACCGAAGGCAAGG
CCGGAGGATATCGTTAATATGGATTTGAAGTCCACGCTCCGGGTGCTGTACACACTGTTC
ACGAAGTACCGCAACAATCCGTGAACGCGCCGTGACAGGGACCGATGGAAAGATGAAGCG
TTTAGCGCCCGTTACTCGACAGCTAATCCCAATGTGCCTTCCGTTTTTTGTTTCTATAAC
TGTTGTGTGCTGTGCTGCAACACGTGTGGTACGAGTATAGAGAGTATTAACATAGGAAAA
CTAATTACCCGATCAATGTCCCGACGAGAAGTGCTAAAAGAGAGAGGAAGAGAATATGTG
TGTTTGTGCCTTCAGTCAGTGTTTTTTTACAACTTAACTAGTAATTATTAAATCCATAAC
AATCGATGTTTGCTAACGTTTGCTGGTGAAATAAAACGTTAACGCGGG

consensusID : consensus_9116#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 970
fasta sequence

                              [GAAAAAAAAACAAACCAGGCAAAGTGCACCAAAACCCTCGGAATGTCCACCCTAACGCGTCCAAAATCCCCCCGAACTCCCACTTCCGGGCGGGCCGATAAGGAGGAAAGCATCTGGGACAAAATTGGAACGCTGGGAAGGAAGAAGCGCATAAAGGAAGTGCAAGAAATCCAGGAGGAGGGTAAGATTGCGATCGACTCCCCCGGCAGCCCGAATGCACCGATCATCCCGCCGGAGGACTACAACCTGGAGGACAATGAATCTCGCTCGATCATTCAGCCTGCCTCGCTGCAGATGCCAAAGGTGAAGGAGCTGCTGCAGGTGCTGATCGACTGGATCAACGACGAGCTGGTGGAGGAGCGAATCATCGTCACCAACATCGAGAAAAATCTGTACGACGGCCAGGTGCTGCAG-AAGCTGTGGGAAAAGCTGTCCAACAACAAGCTGAACGTACCGCTGCACGATTTCCACCTCACGCCAAAGGACGCCGATCAGATGACGCACAACGTGGCGTTCGCGTTCGAGCTGATGATGGACCAGGGCCTGAGACCGAA-GCAAGGCCGGAGGATATCGTTAATATGGATTTGAAGTCCACGCTCCGGGTGCTGTACACACTGTTCACGAAGTACCGCAACAATCCGTGAACGCGACGTGGCGAGGACAGATCGCAAGATGAAGCGTTTAGCGCCCGTTACTCGACAGCTAATCCCAATGTGCCTTCCGTGTTTTGTTTATGTAACTGTTGCGTGCTGTGCTACAACACGTGTGGAAAGAGTATAGAGAGTATTAACATAGGAAAACTAATTATATTTATACCCGATCAATGTCCCGACGAGAAGTGCTAAAAGAGAGAGGGAGAGAATATGTGTGTTTGTGCCTTCAGTCAGTGTTTTTTATTACAACTTAACTAGTGATTATTAA-ATCCATAACAATCGATGTTTGCTAACGTTTGCTGGTGAAACAAAACGTT]

[+] EMBL CNS098U7             [GAAAAAAAAACAAACCAGGCAAAGTGCACCAAAACCCTCGGAATGTCCACCCTAACGCGTCCAAAATCCCCCCGAACTCCCACTTCCGGGCGGGCCGATAAGGAGGAAAGCATCTGGGACAAAATTGGAACGCTGGGAAGGAAGAAGCGCATAAAGGAAGTGCAAGAAATCCAGGAGGAGGGTAAGATTGCGATCGACTCCCCCGGCAGCCCGAATGCACCGATCATCCCGCCGGAGGACTACAACCTGGAGGACAATGAATCTCGCTCGATCATTCAGCCTGCCTCGCTGCAGATGCCAAAGGTGAAGGAGCTGCTGCAGGTGCTGATCGACTGGATCAACGACGAGCTGGTGGAGGAGCGAATCATCGTCACCAACATCGAGAAAAATCTGTACGACGGCCAGGTGCTGCAG AAGCTGTGGGAAAAGCTGTCCAACAACAAGCTGAACGTACCGCTGCACGATTTCCACCTCACGCCAAAGGACGCCGATCAGATGACGCACAACGTGGCGTTCGCGTTCGAGCTGATGATGGACCAGGGCCTGAGACCGAA GCAAGGCCGGAGGATATCGTTAATATGGATTTGAAGTCCACGCTCCGGGTGCTGTACACACTGTTCACGAAGTACCGCAACAATCCGTGAACGCGACGTGGCGAGGACAGATCGCAAGATGAAGCGTTTAGCGCCCGTTACTCGACAGCTAATCCCAATGTGCCTTCCGTGTTTTGTTTATGTAACTGTTGCGTGCTGTGCTACAACACGTGTGGAAAGAGTATAGAGAGTATTAACATAGGAAAACTAATTATATTTATACCCGATCAATGTCCCGACGAGAAGTGCTAAAAGAGAGAGGGAGAGAATATGTGTGTTTGTGCCTTCAGTCAGTGTTTTTTATTACAACTTAACTAGTGATTATTAA ATCCATAACAATCGATGTTTGCTAACGTTTGCTGGTGAAACAAAACGTT]
[-] EMBL CNS098U8             [                                                                                                         GAAAGCATCTGGGACAAAATTGGAACGCTGGGAAGGAAAAAGCGCATAAAGGAAGTGAAAGAAATCCAGGAGGGGGGTAAGATTGCGATCGACTCCCCCGGCAGCCCGAATGCACCGATCATCCCGCCGGAGGACTACAACCTGGAGGACAATGAATCTCGCTCGATCATTCAGCCTCCCTCGCTGCAGATGCCAAAGGTGAAGGGGCTGCTGCAGGTGCTGATCAACTGGATCAACGACGAGCTGGTGGAGGAGCGAATCATCGTCACCAACATCGAGGAGGATCTGTACGACGGCCAGGTGCTGCAGAAAGCTGTGGGAAAAGCTGTCCAACAACAAGCTGAACGTACCGCTGCACGATTTCCCCCTCACGCCAAAGGACGCCGATCAGATGACGCACAACGTGGCGTTCGCGTTCGAGCTGATGATGGACCAGGGCCTGAGACCGAAGGCAAGGCCGGAGGATATCGTTAATATGGATTTGAAGTCCACGCTCCGGGTGCTGTACACACTGTTCACGAAGTACCGCAACAATCCGTGAACGCGACGTGGCGAGGACAGATCGCAAGATGAAGCGTTTAGCGCCCGTTACTCGACAGCTAATCCCAATGTGCCTTCCGTGTTTTGTTTATGTAACTGTTGCGTGCTGTGCTACAACACGTGTGGTACGAGTATAGAGAGTATTAACATAGGAAAACTAATTATATTTATACCCGATCAATGTCCCGACGAGAAGTGCTAAAAGAGAGAGGGAGAGAATATGTGTGTTTGTGCCTTCAGTCAGTGTTTTTTATTACAACTTAACTAGTGATTATTAATATCCATAACAATCGATGTTTGCTAA                        ]




>consensus_9116#1
GAAAAAAAAACAAACCAGGCAAAGTGCACCAAAACCCTCGGAATGTCCACCCTAACGCGT
CCAAAATCCCCCCGAACTCCCACTTCCGGGCGGGCCGATAAGGAGGAAAGCATCTGGGAC
AAAATTGGAACGCTGGGAAGGAAGAAGCGCATAAAGGAAGTGCAAGAAATCCAGGAGGAG
GGTAAGATTGCGATCGACTCCCCCGGCAGCCCGAATGCACCGATCATCCCGCCGGAGGAC
TACAACCTGGAGGACAATGAATCTCGCTCGATCATTCAGCCTGCCTCGCTGCAGATGCCA
AAGGTGAAGGAGCTGCTGCAGGTGCTGATCGACTGGATCAACGACGAGCTGGTGGAGGAG
CGAATCATCGTCACCAACATCGAGAAAAATCTGTACGACGGCCAGGTGCTGCAGAAGCTG
TGGGAAAAGCTGTCCAACAACAAGCTGAACGTACCGCTGCACGATTTCCACCTCACGCCA
AAGGACGCCGATCAGATGACGCACAACGTGGCGTTCGCGTTCGAGCTGATGATGGACCAG
GGCCTGAGACCGAAGCAAGGCCGGAGGATATCGTTAATATGGATTTGAAGTCCACGCTCC
GGGTGCTGTACACACTGTTCACGAAGTACCGCAACAATCCGTGAACGCGACGTGGCGAGG
ACAGATCGCAAGATGAAGCGTTTAGCGCCCGTTACTCGACAGCTAATCCCAATGTGCCTT
CCGTGTTTTGTTTATGTAACTGTTGCGTGCTGTGCTACAACACGTGTGGAAAGAGTATAG
AGAGTATTAACATAGGAAAACTAATTATATTTATACCCGATCAATGTCCCGACGAGAAGT
GCTAAAAGAGAGAGGGAGAGAATATGTGTGTTTGTGCCTTCAGTCAGTGTTTTTTATTAC
AACTTAACTAGTGATTATTAAATCCATAACAATCGATGTTTGCTAACGTTTGCTGGTGAA
ACAAAACGTT

consensusID : consensus_9116#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 906
fasta sequence

                              [CCGCCCACGCGTCCG-CCCAGGCAAAGTGCAACCAAAACCCTCGGAATGTCCACCCTAACGCGTCCAAAATCCCCCCGAACTCCCACTTCCGGGCGGGCCGATAAGGAGGAAAGCATCTGGGACAAAATTGGAACGCTGGGAAGGAAGAAGCGCATAAAGGAAGTGCAAGAAATCCAGGAGGAGGGCAAGATTGCGATCGACTCCCCCGGCAGCCCGAATGCACCGATCATCCCGCCGGAGGACTACAACCTGGAGGACAATGAATCTCGCTCGATCATTCAGCCTGCCTCGCTGCAGATGCCAAAGGTGAAGGAGCTGCTGCAGGTGCTGATCGACTGGATCAACGACGAGCTGGTGGAGGAGCGAATCATCGTCACCAACATCGAGGAAGATCTGTACGACGGCCAGGTGCTGCAGAAGCTGTGGGAAAAGCTGTCCAACAACAAGCTGAACGTGCCGGAAGTGACCCAGTCGGCGGAAGGCCAGCGCCAGAAGCTGTCCGTCGTGCTGAATGCGGTGAATCATACGCTCGGCTACCATCACAACACCCCAAAGTGGACGGTGGAAAGCATACACACGAAGAACATTGTGTCGATCTTGCATTTGCTCGTTGCGCTGGTGCGCCATTACCGTGCCCCGATCCGGCTGCCCGACAACGTATTCGTGACGGTCGTGATGGTGCAGAAGCTGAACGGAAAGCTCACCAGCCAGCGGTTCCAGGAGCAGATTACCCAATCGTACGATGACGTTGGCATGCGGTGCGAGCCGGACGCGTTCGATACGCTGTTCGACCATGCGCCGGACAAGCTGCTGGGTGGATTTTTCGTACCGCTGCACGATTTCCACCTCACGCCAAAGGACGCCGATCAGATGACGCACAACGGGGGGGTCGCGTTCGAGCTGATG]

[+] EMBL BM649253             [CCGCCCACGCGTCCG CCCAGGCAAAGTGCAACCAAAACCCTCGGAATGTCCACCCTAACGCGTCCAAAATCCCCCCGAACTCCCACTTCCGGGCGGGCCGATAAGGAGGAAAGCATCTGGGACAAAATTGGAACGCTGGGAAGGAAGAAGCGCATAAAGGAAGTGCAAGAAATCCAGGAGGAGGGCAAGATTGCGATCGACTCCCCCGGCAGCCCGAATGCACCGATCATCCCGCCGGAGGACTACAACCTGGAGGACAATGAATCTCGCTCGATCATTCAGCCTGCCTCGCTGCAGATGCCAAAGGTGAAGGAGCTGCTGCAGGTGCTGATCGACTGGATCAACGACGAGCTGGTGGAGGAGCGAATCATCGTCACCAACATCGAGGAAGATCTGTACGACGGCCAGGTGCTGCAGAAGCTGTGGGAAAAGCTGTCCAACAACAAGCTGAACGTGCCGGAAGTGACCCAGTCGGCGGAAGGCCAGCGCCAGAAGCTGTCCGTCGTGCTGAATGCGGTGAATCATACGCTCGGCTACCATCACAACACCCCAAAGTGGACGGTGGAAAGCATACACACGAAGAACATTGTGTCGATCTTGCATTTGCTCGTTGCGCTGGTGCGCCATTACCGTGCCCCGATCCGGCTGCCCGACAACGT                                                                                                                                                                                                                                                       ]
[+] EMBL BM628669             [            CCGACCCAGGCAAAGTGCAACCAAAACCCTCGGAATGTCCACCCTAACGCGTCCAAAATCCCCCCGAACTCCCACTTCCGGGCGGGCCGATAAGGAGGAAAGCATCTGGGACAAAATTGGAACGCTGGGAAGGAAGAAGCGCATAAAGGAAGTGCAAGAAATCCAGGAGGAGGGCAAGATTGCGATCGACTCCCCCGGCAGCCCGAATGCACCGATCATCCCGCCGGAGGACTACAACCTGGAGGACAATGAATCTCGCTCGATCATTCAGCCTGCCTCGCTGCAGATGCCAAAGGTGAAGGAGCTGCTGCAGGTGCTGATCGACTGGATCAACGACGAGCTGGTGGAGGAGCGAATCATCGTCACCAACATCGAGGAGGATCTGTACGACGGCCAGGTGCTGCAGAAGCTGTGGGAAAAGCTGTCCAACAACAAGCTGAACGTGCCGGAAGTGACCCAGTCAGCAGAAGGCCAGCGCCAGAAGCTATCCGTCGTGCTGAATGCGGTGAATCATACGCTCGGTTACCATCACAACACCCCAAAGTGGACGGTGGAAAGCATACACACGAAGAACATTGTGTCGATCTTGCATTTGCTCGTTGCGCTGGTGCGCCATTACCGTGGCCCGATC                                                                                                                                                                                                                                                                        ]
[+] EMBL CNS08IHU             [                                                                                                                                                                                                                                                                                                                                                                                                                                            ccccGCTGTCCAACAACAAGCTGAACGTGCCGGAAGTGACCCAGTCGGCGGAAGGCCAGCGCCAGAAGCTGTCCGTCGTGCTGAATGCGGTGAATCATACGCTCGGCTACCATCACAACACCCCAAAGTGGACGGTGGAAAGCATACACACGAAGAACATTGTATCGATCTTGCATTTGCTCGTTGCGCTGGTGCGCCATTACCGTGCCCCGATCCGGCTGCCCGACAACGTATTCGTGACGGTCGTGATGGTGCAGAAGCTGAACGGAAAGCTCACCAGCCAGCGGTTCCAGGAGCAGATTACCCAATCGTACGATGACGTTGGCATGCGGTGCGAGCCGGACGCGTTCGATACGCTGTTCGACCATGCGCCGGACAAGCTGCTGGGTGGATTTTTCGTACCGCTGCACGATTTCCACCTCACGCCAAAGGACGCCGATCAGATGACGCACAACGGGGGGGTCGCGTTCGAGCTGATG]




>consensus_9116#2
CCGCCCACGCGTCCGCCCAGGCAAAGTGCAACCAAAACCCTCGGAATGTCCACCCTAACG
CGTCCAAAATCCCCCCGAACTCCCACTTCCGGGCGGGCCGATAAGGAGGAAAGCATCTGG
GACAAAATTGGAACGCTGGGAAGGAAGAAGCGCATAAAGGAAGTGCAAGAAATCCAGGAG
GAGGGCAAGATTGCGATCGACTCCCCCGGCAGCCCGAATGCACCGATCATCCCGCCGGAG
GACTACAACCTGGAGGACAATGAATCTCGCTCGATCATTCAGCCTGCCTCGCTGCAGATG
CCAAAGGTGAAGGAGCTGCTGCAGGTGCTGATCGACTGGATCAACGACGAGCTGGTGGAG
GAGCGAATCATCGTCACCAACATCGAGGAAGATCTGTACGACGGCCAGGTGCTGCAGAAG
CTGTGGGAAAAGCTGTCCAACAACAAGCTGAACGTGCCGGAAGTGACCCAGTCGGCGGAA
GGCCAGCGCCAGAAGCTGTCCGTCGTGCTGAATGCGGTGAATCATACGCTCGGCTACCAT
CACAACACCCCAAAGTGGACGGTGGAAAGCATACACACGAAGAACATTGTGTCGATCTTG
CATTTGCTCGTTGCGCTGGTGCGCCATTACCGTGCCCCGATCCGGCTGCCCGACAACGTA
TTCGTGACGGTCGTGATGGTGCAGAAGCTGAACGGAAAGCTCACCAGCCAGCGGTTCCAG
GAGCAGATTACCCAATCGTACGATGACGTTGGCATGCGGTGCGAGCCGGACGCGTTCGAT
ACGCTGTTCGACCATGCGCCGGACAAGCTGCTGGGTGGATTTTTCGTACCGCTGCACGAT
TTCCACCTCACGCCAAAGGACGCCGATCAGATGACGCACAACGGGGGGGTCGCGTTCGAG
CTGATG

consensusID : consensus_9116#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 861
fasta sequence

                              [GCAGAATCCGAGGTTTAAAGTCACCAGCCAGCGGTTCCAGGAGCNGATTACCCAATCGTACGATGACGTTGGCATGCGGTGCGAACCGGACGCGTTCGATACGCTGTTCGACCATGTCGCCGGACAAGCTGAAGGTGGTGCAGCGTTCGCTGATCTCGTATCGTGAACAAGCACCTGAACAAGCTGAACTTCGAGTGCTGNGCCTGACCTGTAACACGGACTTTAAGGACGGTGTGTATCTCTGTGTCTGCTGATGGGGCTGCTGGGTGGATTATCTCTCCGTACCGCTGCACGATTTCCACCTCACTGCCAAAGGACGCCGATCAGATGACGCACAACTGTGTGCCGTTCGCGCTACGANGCTGATGATGGANACAGGGGCCTGAGGACCGAAGGCANAGGCCGGGCAGGACTATCGGTCTACAACTATGGATTCTGAAAGTCCACGCTCCGGGTGCTGTACCACACTGTTTCACGAAGTACCGCCAACAATACCGTGAACCGCNGCACGCTGGCNAGAGNACACGATCGCANACGATGCACGCGTATCTAGCGCCCGCNTACATTCCGAACAACGGCGTNAATTCCCCAAATAGGGGATAGACGCCCCTTATCCCCCGNGCAGGGTNTAACCATATCNGGGTACAACAACTATTGGGTTACAACCCATGGGCTGACTGGTCGACGGCTAGCCNATGGATCTGACAGCTAAAACAAAACAACCAACCNCGTAGTCCNTGACGGATAAACCACGAACGGATCTTACATCCNAACGCAAGCGCTACATTATANAACAACCCACATATCAACGGACNACAACACACCTATANACAATCTAACATACGTATNCTAACNAACCCC]

[+] EMBL AL692349             [GCAGAATCCGAGGTTTAAAGTCACCAGCCAGCGGTTCCAGGAGCNGATTACCCAATCGTACGATGACGTTGGCATGCGGTGCGAACCGGACGCGTTCGATACGCTGTTCGACCATGTCGCCGGACAAGCTGAAGGTGGTGCAGCGTTCGCTGATCTCGTATCGTGAACAAGCACCTGAACAAGCTGAACTTCGAGTGCTGNGCCTGACCTGTAACACGGACTTTAAGGACGGTGTGTATCTCTGTGTCTGCTGATGGGGCTGCTGGGTGGATTATCTCTCCGTACCGCTGCACGATTTCCACCTCACTGCCAAAGGACGCCGATCAGATGACGCACAACTGTGTGCCGTTCGCGCTACGANGCTGATGATGGANACAGGGGCCTGAGGACCGAAGGCANAGGCCGGGCAGGACTATCGGTCTACAACTATGGATTCTGAAAGTCCACGCTCCGGGTGCTGTACCACACTGTTTCACGAAGTACCGCCAACAATACCGTGAACCGCNGCACGCTGGCNAGAGNACACGATCGCANACGATGCACGCGTATCTAGCGCCCGCNTACATTCCGAACAACGGCGTNAATTCCCCAAATAGGGGATAGACGCCCCTTATCCCCCGNGCAGGGTNTAACCATATCNGGGTACAACAACTATTGGGTTACAACCCATGGGCTGACTGGTCGACGGCTAGCCNATGGATCTGACAGCTAAAACAAAACAACCAACCNCGTAGTCCNTGACGGATAAACCACGAACGGATCTTACATCCNAACGCAAGCGCTACATTATANAACAACCCACATATCAACGGACNACAACACACCTATANACAATCTAACATACGTATNCTAACNAACCCC]




>consensus_9116#3
GCAGAATCCGAGGTTTAAAGTCACCAGCCAGCGGTTCCAGGAGCNGATTACCCAATCGTA
CGATGACGTTGGCATGCGGTGCGAACCGGACGCGTTCGATACGCTGTTCGACCATGTCGC
CGGACAAGCTGAAGGTGGTGCAGCGTTCGCTGATCTCGTATCGTGAACAAGCACCTGAAC
AAGCTGAACTTCGAGTGCTGNGCCTGACCTGTAACACGGACTTTAAGGACGGTGTGTATC
TCTGTGTCTGCTGATGGGGCTGCTGGGTGGATTATCTCTCCGTACCGCTGCACGATTTCC
ACCTCACTGCCAAAGGACGCCGATCAGATGACGCACAACTGTGTGCCGTTCGCGCTACGA
NGCTGATGATGGANACAGGGGCCTGAGGACCGAAGGCANAGGCCGGGCAGGACTATCGGT
CTACAACTATGGATTCTGAAAGTCCACGCTCCGGGTGCTGTACCACACTGTTTCACGAAG
TACCGCCAACAATACCGTGAACCGCNGCACGCTGGCNAGAGNACACGATCGCANACGATG
CACGCGTATCTAGCGCCCGCNTACATTCCGAACAACGGCGTNAATTCCCCAAATAGGGGA
TAGACGCCCCTTATCCCCCGNGCAGGGTNTAACCATATCNGGGTACAACAACTATTGGGT
TACAACCCATGGGCTGACTGGTCGACGGCTAGCCNATGGATCTGACAGCTAAAACAAAAC
AACCAACCNCGTAGTCCNTGACGGATAAACCACGAACGGATCTTACATCCNAACGCAAGC
GCTACATTATANAACAACCCACATATCAACGGACNACAACACACCTATANACAATCTAAC
ATACGTATNCTAACNAACCCC

consensusID : consensus_9116#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 490
fasta sequence

                              [GGCCGCAGAAGCTGGGGGAAAAGCTGGCCAACAACAAGCTGAACGTACCGGAAGGGACCCAGTCGGCGGAAGGCCAGCGCCAGAAGCTGTCTGTCGGGCTGAATGCGGGGAAACATACGCTCGGTGACCATCACAACACCCCAAAGTGGACGGGGGAAAGCATACACACGAAGAACATGGTGTCGATCTTGCATTGGCTCGTGGCGCTGGGGCGCCATTACCGGGCCCCGATCCGGCGGCCCGACAACGTTTTCGTGACGGTCGTGATGGTGCAGAAGCCGAACGGAAAGCTCACCAGCCAGCGGTGCCAGGAGCAGAATACCCAATCGTACGAAGACGTTGGCAGGCGGGGCGAACCGGACGCGTCCGAAACGCTGTGCGACCATGCGCCGGACAAGCCGAAGGGGGGGCAGCGTCCGCGGAACCCGGCCGGGAACAAGCACCGGAACAAGCGGAACTCCGAGGCGGCCGACCGGAACACGGACCTAAA]

[+] EMBL BX610418             [GGCCGCAGAAGCTGGGGGAAAAGCTGGCCAACAACAAGCTGAACGTACCGGAAGGGACCCAGTCGGCGGAAGGCCAGCGCCAGAAGCTGTCTGTCGGGCTGAATGCGGGGAAACATACGCTCGGTGACCATCACAACACCCCAAAGTGGACGGGGGAAAGCATACACACGAAGAACATGGTGTCGATCTTGCATTGGCTCGTGGCGCTGGGGCGCCATTACCGGGCCCCGATCCGGCGGCCCGACAACGTTTTCGTGACGGTCGTGATGGTGCAGAAGCCGAACGGAAAGCTCACCAGCCAGCGGTGCCAGGAGCAGAATACCCAATCGTACGAAGACGTTGGCAGGCGGGGCGAACCGGACGCGTCCGAAACGCTGTGCGACCATGCGCCGGACAAGCCGAAGGGGGGGCAGCGTCCGCGGAACCCGGCCGGGAACAAGCACCGGAACAAGCGGAACTCCGAGGCGGCCGACCGGAACACGGACCTAAA]




>consensus_9116#4
GGCCGCAGAAGCTGGGGGAAAAGCTGGCCAACAACAAGCTGAACGTACCGGAAGGGACCC
AGTCGGCGGAAGGCCAGCGCCAGAAGCTGTCTGTCGGGCTGAATGCGGGGAAACATACGC
TCGGTGACCATCACAACACCCCAAAGTGGACGGGGGAAAGCATACACACGAAGAACATGG
TGTCGATCTTGCATTGGCTCGTGGCGCTGGGGCGCCATTACCGGGCCCCGATCCGGCGGC
CCGACAACGTTTTCGTGACGGTCGTGATGGTGCAGAAGCCGAACGGAAAGCTCACCAGCC
AGCGGTGCCAGGAGCAGAATACCCAATCGTACGAAGACGTTGGCAGGCGGGGCGAACCGG
ACGCGTCCGAAACGCTGTGCGACCATGCGCCGGACAAGCCGAAGGGGGGGCAGCGTCCGC
GGAACCCGGCCGGGAACAAGCACCGGAACAAGCGGAACTCCGAGGCGGCCGACCGGAACA
CGGACCTAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9116#0      CCGCCCACGCGTCCGGGAGCCGCAAAAAAACAACAAACCCAGGCAAAGTGCAACCAAAAC 60
consensus_9116#1      -----------------------GAAAAAAAAACAAACC-AGGCAAAGTGCA-CCAAAAC 35
consensus_9116#2      ----------------------CCGCCCACGCGTCCGCCCAGGCAAAGTGCAACCAAAAC 38
consensus_9116#4      ------------------------------------------------------------
consensus_9116#3      ------------------------------------------------------------
                                                                                  

consensus_9116#0      CCTCGGAATGTCCACCCTAACGCGTCCAAAATCCCCCCGAACTCCCACTTCCGGGCGGGC 120
consensus_9116#1      CCTCGGAATGTCCACCCTAACGCGTCCAAAATCCCCCCGAACTCCCACTTCCGGGCGGGC 95
consensus_9116#2      CCTCGGAATGTCCACCCTAACGCGTCCAAAATCCCCCCGAACTCCCACTTCCGGGCGGGC 98
consensus_9116#4      ------------------------------------------------------------
consensus_9116#3      ------------------------------------------------------------
                                                                                  

consensus_9116#0      CGATAAGGAGGAAAGCATCTGGGACAAAATTGGAACGCTGGGAAGGAAGAAGCGCATAAA 180
consensus_9116#1      CGATAAGGAGGAAAGCATCTGGGACAAAATTGGAACGCTGGGAAGGAAGAAGCGCATAAA 155
consensus_9116#2      CGATAAGGAGGAAAGCATCTGGGACAAAATTGGAACGCTGGGAAGGAAGAAGCGCATAAA 158
consensus_9116#4      ------------------------------------------------------------
consensus_9116#3      ------------------------------------------------------------
                                                                                  

consensus_9116#0      GGAAGTGCAAGAAATCCAGGAGGAGGGTAAGATTGCGATCGACTCCCCCGGCAGCCCGAA 240
consensus_9116#1      GGAAGTGCAAGAAATCCAGGAGGAGGGTAAGATTGCGATCGACTCCCCCGGCAGCCCGAA 215
consensus_9116#2      GGAAGTGCAAGAAATCCAGGAGGAGGGCAAGATTGCGATCGACTCCCCCGGCAGCCCGAA 218
consensus_9116#4      ------------------------------------------------------------
consensus_9116#3      -------------------GCAGAATCCGAGGTTTAAAGTCAC-CAGCCAGCGGTTCCAG 40
                                                                                  

consensus_9116#0      TGCACCGATCATCCCGCCGGAGGACTACAACCTGGAGGACAATGAATCTCGCTCGATCAT 300
consensus_9116#1      TGCACCGATCATCCCGCCGGAGGACTACAACCTGGAGGACAATGAATCTCGCTCGATCAT 275
consensus_9116#2      TGCACCGATCATCCCGCCGGAGGACTACAACCTGGAGGACAATGAATCTCGCTCGATCAT 278
consensus_9116#4      ------------------------------------------------------------
consensus_9116#3      -GAGCNGATTACCCAATCGTACGATGACGTTGGCATGCGGTGCGAACCGGACGCGTTCGA 99
                                                                                  

consensus_9116#0      TCAGCC-TGCCTCGCTGCAGATGCCAAAGGTGAAGGAGCTGCTGCAGGTGCTGATCGACT 359
consensus_9116#1      TCAGCC-TGCCTCGCTGCAGATGCCAAAGGTGAAGGAGCTGCTGCAGGTGCTGATCGACT 334
consensus_9116#2      TCAGCC-TGCCTCGCTGCAGATGCCAAAGGTGAAGGAGCTGCTGCAGGTGCTGATCGACT 337
consensus_9116#4      ------------------------------------------------------------
consensus_9116#3      TACGCTGTTCGACCATGTCGCCGGACAAGCTGAAGGTGGTGCAGCGTTCGCTGATC--TC 157
                                                                                  

consensus_9116#0      GGATCAACGACGAGCTGGTGGAGGAGCGAATCATCG-------TCACCAACATCGAGGAG 412
consensus_9116#1      GGATCAACGACGAGCTGGTGGAGGAGCGAATCATCG-------TCACCAACATCGAGAAA 387
consensus_9116#2      GGATCAACGACGAGCTGGTGGAGGAGCGAATCATCG-------TCACCAACATCGAGGAA 390
consensus_9116#4      ------------------------------------------------------------
consensus_9116#3      GTATCGTGAACAAGCACCTGAACAAGCTGAACTTCGAGTGCTGNGCCTGACCTGTAACAC 217
                                                                                  

consensus_9116#0      GATCTGTACGACGGCCAGGTGCTGCAGAAGCTGTGGGAAAAGCTGTCCAACA-ACAAGCT 471
consensus_9116#1      AATCTGTACGACGGCCAGGTGCTGCAGAAGCTGTGGGAAAAGCTGTCCAACA-ACAAGCT 446
consensus_9116#2      GATCTGTACGACGGCCAGGTGCTGCAGAAGCTGTGGGAAAAGCTGTCCAACA-ACAAGCT 449
consensus_9116#4      -------------------GGCCGCAGAAGCTGGGGGAAAAGCTGGCCAACA-ACAAGCT 40
consensus_9116#3      GGACTTTAAGGACGGTGTGTATCTCTGTGTCTGCTGATGGGGCTGCTGGGTGGATTATCT 277
                                              * *   ***  *     ****        *  * **

consensus_9116#0      GAACGTACCGGAAGTGACCCAGTCGGCGGAAGGCCAGCGCCAGAAGCTGTCTGTCGTGCT 531
consensus_9116#1      GAACGTACCG-------------------------------------------------- 456
consensus_9116#2      GAACGTGCCG-------------------------------------------------- 459
consensus_9116#4      GAACGTACCG-------------------------------------------------- 50
consensus_9116#3      CTCCGTACCG-------------------------------------------------- 287
                         *** ***                                                  

consensus_9116#0      GAATGCGGTGAATCATACGCTCGGTTACCATCACAACACCCCAAAGTGGACGGTGGAAAG 591
consensus_9116#1      ------------------------------------------------------------
consensus_9116#2      ------------------------------------------------------------
consensus_9116#4      ------------------------------------------------------------
consensus_9116#3      ------------------------------------------------------------
                                                                                  

consensus_9116#0      CATACACACGAAGAACATTGTGTCGATCTTGCATTTGCTCGTTGCGCTGGTGCGCCATTA 651
consensus_9116#1      ------------------------------------------------------------
consensus_9116#2      ------------------------------------------------------------
consensus_9116#4      ------------------------------------------------------------
consensus_9116#3      ------------------------------------------------------------
                                                                                  

consensus_9116#0      CCGTGCCCCGATCCGGCTGCCCGACAACGTGTTCGTGACGGTCGTGATGGTGCAGAAGCT 711
consensus_9116#1      ------------------------------------------------------------
consensus_9116#2      ------------------------------------------------------------
consensus_9116#4      ------------------------------------------------------------
consensus_9116#3      ------------------------------------------------------------
                                                                                  

consensus_9116#0      GAACGGAAAGCTCACCAGCCAGCGGTTCCAGGAGCAGATTACCCAATCGTACGATGACGT 771
consensus_9116#1      ------------------------------------------------------------
consensus_9116#2      ------------------------------------------------------------
consensus_9116#4      ------------------------------------------------------------
consensus_9116#3      ------------------------------------------------------------
                                                                                  

consensus_9116#0      TGGCATGCGGTGCGAACCGGACGCGTTCGATACGCTGTTCGACCATGCGCCGGACAAGCT 831
consensus_9116#1      ------------------------------------------------------------
consensus_9116#2      ------------------------------------------------------------
consensus_9116#4      ------------------------------------------------------------
consensus_9116#3      ------------------------------------------------------------
                                                                                  

consensus_9116#0      GAAGGTGGTGCAGCGTTCGCTGATCTCGTTCGTGAACAAGCACCTGAACAAGCTGAACTT 891
consensus_9116#1      ------------------------------------------------------------
consensus_9116#2      ------------------------------------------------------------
consensus_9116#4      ------------------------------------------------------------
consensus_9116#3      ------------------------------------------------------------
                                                                                  

consensus_9116#0      CGAGGCGGCCGACCTGAACACGGACTTTAAGGACGGTGTGTTTCTGTGTCTGCTGATGGG 951
consensus_9116#1      ------------------------------------------------------------
consensus_9116#2      ------------------------------------------------------------
consensus_9116#4      ------------------------------------------------------------
consensus_9116#3      ------------------------------------------------------------
                                                                                  

consensus_9116#0      GCTGCTGGGTGGATTTTTCGTACCCTGCACGATTTCCACCTCAC-GCCAAAGGACGCCGA 1010
consensus_9116#1      ------------------------CTGCACGATTTCCACCTCAC-GCCAAAGGACGCCGA 491
consensus_9116#2      ---------------------------GAAGTGACCCAGTCGGC-G--GAAGGCCAGCG- 488
consensus_9116#4      ---------------------------GAAGGGACCCAGTCGGC-G--GAAGGCCAGCG- 79
consensus_9116#3      ------------------------CTGCACGATTTCCACCTCACTGCCAAAGGACGCCGA 323
                                                  * *    ***     * *   **** *  ** 

consensus_9116#0      TCAGATGACGCACAAC---GTGGCGTTCGCGTT--CGAGCTGATGATGG---ACCAGGGC 1062
consensus_9116#1      TCAGATGACGCACAAC---GTGGCGTTCGCGTT--CGAGCTGATGATGG---ACCAGGGC 543
consensus_9116#2      CCAGAAGCTGTCCGTC---GTGCTGAATGCGGT--GAATCATACGCTCGGCTACCATCAC 543
consensus_9116#4      CCAGAAGCTGTCTGTC---GGGCTGAATGCGGG--GAAACATACGCTCGGTGACCATCAC 134
consensus_9116#3      TCAGATGACGCACAACTGTGTGCCGTTCGCGCTACGANGCTGATGATGGAN-ACAGGGGC 382
                       **** *  *     *   * *  *   ***        *  * * * *   **     *

consensus_9116#0      CTGAG--ACCGAAGGCAAGGCCGGAGGATATCGTT--------AATATGGATTT--GAAG 1110
consensus_9116#1      CTGAG--ACCGAAG-CAAGGCCGGAGGATATCGTT--------AATATGGATTT--GAAG 590
consensus_9116#2      AACAC--CCCAAAGTGGACGGTGGAAAGCATACAC--------ACGAAGAACAT--TGTG 591
consensus_9116#4      AACAC--CCCAAAGTGGACGGGGGAAAGCATACAC--------ACGAAGAACAT--GGTG 182
consensus_9116#3      CTGAGGACCGAAGGCANAGGCCGGGCAGGACTATCGGTCTACAACTATGGATTCTGAAAG 442
                         *    *  * *   * *  **     *             *  * * *        *

consensus_9116#0      TCCACGCTCCGGGTGCTGTAC-ACACTGTT-CACGAAGTACCG--CAACAATCCGTGAAC 1166
consensus_9116#1      TCCACGCTCCGGGTGCTGTAC-ACACTGTT-CACGAAGTACCG--CAACAATCCGTGAAC 646
consensus_9116#2      TCGATCTTGCATTTGCTCGTT-GCGCTGGT-GCGCCATTACCGTGCCCCGATCCGGCTGC 649
consensus_9116#4      TCGATCTTGCATTGGCTCGTG-GCGCTGGG-GCGCCATTACCGGGCCCCGATCCGGCGGC 240
consensus_9116#3      TCCACGCTCCGGGTGCTGTACCACACTGTTTCACGAAGTACCGC-CAACAATACCGTGAA 501
                      ** *   * *    ***      * ***        * *****  *  * ** *      

consensus_9116#0      GCGCCGTGACAGGGACCGATGGAAAGATGAAGCGTTTAGCGCCCGTTA--CTCGACAGCT 1224
consensus_9116#1      GCGACGTGGCGAGGACAGATCGCAAGATGAAGCGTTTAGCGCCCGTTA--CTCGACAGCT 704
consensus_9116#2      CCGACAACGTATTCGTGACGGTCGTGATGGTGCAGAAGCTGAACGGAAAGCTCACCAGCC 709
consensus_9116#4      CCGACAACGTTTTCGTGACGGTCGTGATGGTGCAGAAGCCGAACGGAAAGCTCACCAGCC 300
consensus_9116#3      CCGCNGCACGCTGGCNAGAGNACACGATCGCANACGATGCACGCGTATCTAGCGCCCGCN 561
                       **                      ***               **       *  * ** 

consensus_9116#0      AATCCCAATGTGCCTTCCGTTTTTTGTT-TCTATAACTGTTG-TGTGCTGTGCTG-CAAC 1281
consensus_9116#1      AATCCCAATGTGCCTTCCGTGTTTTGTT-TATGTAACTGTTG-CGTGCTGTGCTA-CAAC 761
consensus_9116#2      AGCGGTTCCAGGAGCAGATTACCCAATCGTACGATGACGTTGGCATGCGGTGCGAGCCGG 769
consensus_9116#4      AGCGGTGCCAGGAGCAGAATACCCAATCGTACGAAGACGTTGGCAGGCGGGGCGAACCGG 360
consensus_9116#3      TACATTCCGAACAACGGCGTNAATTCCCCAAATAGGGGATAGACGCCCCTTATCCCCCGN 621
                                         *                   * *     *        *   

consensus_9116#0      AC-GTGTGGTA-------CGAGTATAGAGAGTATTAACATAGGA-----AAACTAATTA- 1327
consensus_9116#1      AC-GTGTGGAA-------AGAGTATAGAGAGTATTAACATAGGA-----AAACTAATTAT 808
consensus_9116#2      AC-GCGTTCGA-------TACGCTGTTCGACCATGCGC-CGGAC-----AAGCTGCTGGG 815
consensus_9116#4      AC-GCGTCCGA-------AACGCTGTGCGACCATGCGC-CGGAC-----AAGCCGAAGGG 406
consensus_9116#3      GCAGGGTNTAACCATATCNGGGTACAACAACTATTGGGTTACAACCCATGGGCTGACTGG 681
                       * * **   *          *       *  **                  *       

consensus_9116#0      -------CCCGATCAATGTCCCGACGAGAAGTGCTAAAAGAGAGAGGAAGAGAATATGTG 1380
consensus_9116#1      ATTTATACCCGATCAATGTCCCGACGAGAAGTGCTAAAAGAGAGAGGGAGAGAATATGTG 868
consensus_9116#2      TGGATTTTTCGTACCGCTGCACGATTTCCACCTCACGCCAAAGGACGCCGA--TCAGATG 873
consensus_9116#4      GGGGCAGCGTCCGC-GGAACCCGGCCGGGAACAAGCACCGGAACAAGCGGAACTCCGA-G 464
consensus_9116#3      TCGACGGCTAGCCNATGGATCTGACAGCTAAAACAAAACAACCAACCNCGTAGTCCNTGA 741
                                            *      *              *    *          

consensus_9116#0      TGTTTGTGCCTTCAGTCAGTGTTTTTT--TACAACTTAACTAGTAATTATTAAATCCATA 1438
consensus_9116#1      TGTTTGTGCCTTCAGTCAGTGTTTTTTATTACAACTTAACTAGTGATTATTAAATCCATA 928
consensus_9116#2      -------ACGCACAACGGGGGGGTCGCGTTCGAGCTGATG-------------------- 906
consensus_9116#4      -------GCGGCCGACCGGAACACGGACCTAAA--------------------------- 490
consensus_9116#3      CGGATAAACCACGAACGGATCTTACATCCNAACGCAAGCGCTACATTATANAACAACCCA 801
                              *                                                   

consensus_9116#0      ACAATCGATGTTTGCTAACGTTTGCTGGTGAAATAAAACGTTAACGCGGG---------- 1488
consensus_9116#1      ACAATCGATGTTTGCTAACGTTTGCTGGTGAAACAAAACGTT------------------ 970
consensus_9116#2      ------------------------------------------------------------
consensus_9116#4      ------------------------------------------------------------
consensus_9116#3      CATATCAACGGACNACAACACACCTATANACAATCTAACATACGTATNCTAACNAACCCC 861