cluster # 9150

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Anopheles gambiae
cluster # 9150 cluster # 9150 Sequences # 14 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9150#0 length = 986 sequences # 10
consensus_9150#1 length = 775 sequences # 2

consensus_9150#2 length = 404 sequences # 1
consensus_9150#3 length = 400 sequences # 1

consensusID : consensus_9150#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 986
fasta sequence

                              [GATTAAAGCAAGCGGCCGTCTCCTGTTGCTTCTTGGAATACATTGCAAGCAGTAGGTAGTGGTGACGATTTGTTGGATTATTTGGG-GGTCCAGCAACTTGAACTTGAAACCCCAACTAGCTCGTTTTGGGGGCAGGGTGCAGAAAAGGCAGCTAGCTTCAATTGCCACCATGTCCCGTAGTGTTAAACTTTACTATGACCTCATGTCGCAACCGTCGAGGGCGCTTTACATATTCTTATCGACCAACAAGATCCCCTTTGACCGGTGCCCGATAGCGCTGCGAAAAATGCAGCACAAGACGGACGAATACCGCCGGCAGGTGAACCGGTAC-GCAAGGTGCCCTGCATCGTGGACGGCAGCTTCCGGCTAGCCGAGAGCGTCGCCATCTACCGGTACCTGTGCCGAGAGTTTCCGACCGACGGCCACTGGTACCCGAGCGACACGGTGCGCCAGGCACGCGTCGACGAGTACCTTTCCTGGCAGCACCTAAACCTGCGCGCCGACGTGTCGCTGTACTTT-TTCCACGTGTGGCTAAACCCGCTGCTGGGCAAGGAGCCGGACGCCGGCAAGACGGAACGGTTGCGCCGGCGGCTGGACGGTGTGCTGAACTTTTTCGACCAGGAGCTGCTGTCGGCCGGTAGCGGGCAGGCGTTTCTGGCGGGCGATCGCATCAGCATTGCCGACCTATCGGCCGCTTGCGAGATTGAGCAGGCGAAAATAGCCGGGTACGATCCGTGTGAGGGC-CGGCCGGCACTGGCCAGCTGGCTGACGGCGGTGCGGGAGCGAACCAATCCGTACTACGACGAGGCGCACAAATACGTTTATCGGCTTTCGCCGGACCACATCGTAACGCCGGTCGTTGCGGAAGATGAGTGAATGTTTCGTTCTTTTTGTTGCTACTGTTGCCTAGGTAAAATAAAGATTTTCGATTTCTAAAACCACAAAAAAAAAAAAAAAAAAAAAAAAGGCACATGTTCCCGAGCGGG]

[+] EMBL CNS08HJL             [GATTAAAGCAAGCGGCCGTCTCCTGTTGCTTCTTGGAATACATTGCAAGCAGTAGGTAGTGGTGACGATTTGTTGGATTATTTGGG GGTCCAGCAACTTGAACTTGAAACCCCAACTAGCTCGTTTTGGGGGCAGGGTGCAGAAAAGGCAGCTAGCTTCAATTGCCACCATGTCCCGTAGTGTTAAACTTTACTATGACCTCATGTCGCAACCGTCGAGGGTGCTTTACATATTCTTATCGACTAACAAGATCCCCTTTGACCGGTGCCCGATAGCGCTGCGAAAAATGCAGCACAAGACGGACGAATACCGCCGGCAGGTGAACCGGTAC GCAAGGTGCCCTGCATCGTGGACGGCAGCTTCCGGCTAGCCGAGAGCGTCGCCATCTACCGGTACCTGTGCCGAGAGTTTCCGACCGACGGCCACTGGTACCCGAGCGACACGGTGCGCCAGGCACGCGTCGACGAGTACCTTTCCTGGCAGCACCTAAACCTGCGCGCCGACGTGTCGCTGTACTTTAAAAAACAAAAGGCTAAACCCGCTGCTGGGCAAGGAGCCGGACGCCGGCAAG                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CNS099H5             [                    ctagGTTGCTTTTTGGAATACATTGCAAGCAGTAGGTAGTGGTGACGATTTGTTGGATTATTTGGG GGTCCAGCAACTTGAACTTGAAACCCCAACTAGCTCGTTTTGGGGGCAGGGTGCAGAAA    AGCTAGCTTCAATTGCCACCATGTCCCGTAGTGTTAAACTTTACTATGACCTCATGTCGCAACCGTCGAGGGCGCTTTACATATTCTTATCGACCAACAAGATCCCCTTTGACCGGTGCCCGATAGCGCTGCGAAAAATGCAGCACAAGACGGACGAATACCGCCGGCAGGTGAACCGGTAC GCAAGGTGCCCTGCATCGTGGACGGCAGCTTCCGGCTAGCCGAGAGCGTCGCCATCTACCGGTACCTGTGCCGAGAGTTTCCGACCGACGGCCACTGGTACCCGAGCGACACGGTGCGCCAGGCACACGTCGACGAGTACCTTTCCTGGCAGCACCTAAACCTGCGCGCCGACGTGTCGCTGTACTTT TTCCACGTGTGGCTAAACCCGCTGCTGGGCAAGGAGCCGGACGCCGGCAAGACGGAACGGTTGCGCCGGCGGCTGGACGGTGTGCTGAACTTTTTCGACCAGGAGCTGCTGTCGGCCGGTAGCGGGCAGGCGTTTCTGGCGGGCGATCGCATCAGCATTGCCGACCTATCGGCCGCTTGCGAGATTGAGCAGGCGAAAATAGCCGGGTACGATCCGTGTGAGGGC CGGCCGGCACTGGCCAGCTGGCTGACGGCGGTGCGGGAGCGAACCAATCCGTACTACGACGAGGCGCACAAATACGTTTATCGGCTTTCGCCGGACCACATCGTAACGCCGGTCGTTGCGGAAGATGAGTGAATGTTTCGTTCTTTTTGTTGCTACTGTTGCCTAGGTAAAATAAAGATTTTCGATTTCTAAAACCACAAAAAAAAAAAAAAAAAAAAA                       ]
[+] EMBL CNS09315             [                                  GGAATACATTGCAAGCAGTAGGTAGTGGTGACGATTTGTTGGATTATTTGGG GGTCCAGCAACTTGAACTTGAAACCCCAACTAGCTCGTTTTGGGGGCAGGGTGCAGAAA    AGCTAGCTTCAATTGCCACCATGTCCCGTAGTGTTAAACTTTACTATGACCTCATGTCGCAACCGTCGAGGGCGCTTTACATATTCTTATCGACCAACAAGATCCCCTTTGACCGGTGCCCGATAGCGCTGCGAAAAATGCAGCACAAGACGGACGAATACCGCCGGCAGGTGAACCGGTAC GCAAGGTGCCCTGCATCGTGGACGGCAGCTTCCGGCTAGCCGAGAGCGTCGCCATCTACCGGTACCTGTGCCGAGAGTTTCCGACCGACGGCCACTGGTACCCGAGCGACACGGTGCGCCAGGCACGCGTCGACGAGTACCTTTCCTGGCAGCACCTAAACCTGCGCGCCGACGTGTCGCTGTACTTT TTCCACGTGTGGCTAAACCCGCTGCTGGGCAAGGAGCCGGACGCCGGCAAGACGGAACGGTTGCGCCGGCGGCTGGACGGTGTGCTGAACTTTTTCGACCAGGAGCTGCTGTCGGCCGGTAGCGGGCAGGCGTTTCTGGCGGGCGATCGCATCAGCATTGCCGACCTATCGGCCGCTTGCGAGATTGAGCAGGCGAAAATAGCCGGGTACGATCCGTGTGAGGGC CGGCCGGCACTGGCCAGCTGGCTGACGGCGGTGCGGGAGCGAACCAATCCGTACTACGACGAGGCGCACAAATACGTTTATCGGCTTTCGCCGGACCACATCGTAACGCCGGTCGTTGCGGAAGATGAGTGAATGTTTCGTTCTTTTTGTTGCTACTGTTGCCTAGGTAAAATAAAGATTTTCGATTTCTAAAACCACAAAAAAAAAAAAAAAAAAAAAAAAGGCACATGTTCCCGAGCGGG]
[+] EMBL CNS0962P             [                                ccGGAATA ATTGC AGCAGTAGGTAGTGGTGACGATTTGTTGGATTATTTGGGCGGTCCAGCAACTTGAACTTGAAACCCCAACTAGCTCGTTTTGGGGGCAGGGTGCAGAAA    AGCTAGCTTCAATTGCCACCATGTCCCGTAGTGTTAAACTTTACTATGACCTCATGTCGCAACCGTCGAGGGCGCTTTACATATTCTTATCGACCAACAAGATCCCCTTTGACCGGTGCCCGATAGCGCTGCGAAAAATGCAGCACAAGACGGACGAATACCGCCGGCAGGTGAACCGGTAC GCAAGGTGCCCTGCATCGTGGACGGCAGCTTCCGGCTAGCCGAGAGCGTCGCCATCTACCGGTACCTGTGCCGAGAGTTTCCGACCGACGGCCACTGGTACCCGAGCGACACGGTGCGCCAGGCACGCGTCGACGAGTACCTTTCCTGGCAGCACCTAAACCTGCGCGCCGACGTGTCGCTGTACTTT TTCCACGTGTGGCTAAACCCGCTGCTGGGCAAGGAGCCGGACGCCGGCAAGACGGAACGGTTGCGCCGGCGGCTGGACGGTGTGCTGAACTTTTTCGACCAGGAGCTGCTGTCGGCCGGTAGCGGGCAGGCGTTTCTGGCGGGCGATCGCATCAGCATTGCCGACCTATCGGCCGCTTGCGAGATTGAGCAGGCGAAAATAGCCGGGTACGATCCGTGTGAGGGC CGGCCGGCACTGGCCAGCTGGCTGACGGCGGTGCGGGAGCGAACCAATCCGTACTACGACGAGGCGCACAAATACGTTTATCGGCTTTCGCCGGACCACATCGTAACGCCGGTCGTTGCGGAAGATGAGTGAATGTTTCGTTCTTTTTGTTGCTACTGTTGCCTAGGTAAAATAAAGATTTTCGATTTCTAAA                                                 ]
[-] EMBL CNS08HJM             [                                      TACATTGCAAGCAGTAGGTAGTGGTGACGATTTGTTGGATTATTTGGG GGTCCAGCAACTTGAACTTGAAACCCCAACTAGCTCGTTTTGGGGGCAGGGTGCAGAAAAGGCAGCTAGCTTCAATTGCCACCTTGTCCCGTAGTGTTAAACTTTACTATGACCTCTTGTGGCAACCGTCGAGGGTGCTTTACATATTCTTATCGACTAACAAGATCCCCTTTGACCGGTGCCCGATAGCGCTGCGAAAAATGCAGCACAAGACGGACGAATACCGCCGGCAGGTGAACCGGTACGGCAAGGTGCCCTGCATCGTGGACGGCAGCTTCCGGCTAGCCGAGAGCGTCGCCTTCTTCCTTCTCTTGTGCCGAGAGTTTCCGACCGACGGCTACTGGTACCCGAGCGACACGGTGCGCAAGGCACGCGTCGACGAGTACCTTTCCTGGCAGCACCTAAACCTGCGCGCCGACGTGTCGCTGTACTTT TTCCACGTGTGGCTAAACCCGCTGCTGGGCAAGGAGCCGGACGCCGGCAAGACGGAACGGTTGCGCCGGCGGCTGGACGGTGTGCTGAACTTTTTCGACCAGGGGCTGCTGTCGGCCGGTAGCGGGCAGGCGTTTCTGGCGGGCGATCGCTTCAGCATTGCCGACCTATCGGCCGCTTGCGAGATTGAGCAGGCGAAAATAGCCGGGTACGATCCGTGTGAGGGC CGGCCGGAACTGGCCAGCTGGCTGACGGCGGTGCGGGAGCGAACCAATCCGTACTACGACGAGGCGCACAAATACGTTTAT  TCTTTCGCCGGACCACATCGTAACGCCGGTCGTTGCGGAAGATGAGTGAATGTTTCGTTCTTTTTGTTGCTACTGTTGCCTAGGTAAAATAA                                                                   ]
[+] EMBL CNS09ETR             [                                              AAGCAGTAGGTAGTGGTGACGATTTGTTGGATTATTTGGGCGGTCCAGCAACTTGAACTTGAAACCCCAACTAGCTCGTTTTGGGGGCAGGGTGCAGAAAAGGCAGCTAGCTTCAATTGCCACCATGTCCCGTAGTGTTAAACTTTACTATGACCTCATGTCGCAACCGTCGAGGGCGCTTTACATATTCTTATCGACCAACAAGATCCCCTTTGACCGGTGCCCGATAGCGCTGCGAAAAATGCAGCACAAGACGGACGAATACCGCCGGCAGGTGAACCGGTAC GCAAGGTGCCCTGCATCGTGGACGGCAGCTTCCGGCTAGCCGAGAGCGTCGCCATCTACCGGTACCTGTGCCGAGAGTTTCCGACCGACGGCCACTGGTACCCGAGCGACACGGTGCGCCAGGCACGCGTCGACGAGTACCTTTCCTGGCAGCACCTAAACCTGCGCGCCGACGTGTCGCTGTACTTT TTCCACGTGTGGCTAAACCCGCTGCTGGGCAAGGAGCCGGACGCCGGCAAGACGGAACGGTTGCGCCGGCGGCTGGACGGTGTGCTGAACTTTTTCGACCAGGAGCTGCTGTCGGCCGGTAGCGGGCAGGCGTTTCTGGCGGGCGATCGCATCAGCATTGCCGACCTATCGGCCGCTTGCGAGATTGAGCAGGCGAAAATAGCCGGGTACGATCCGTGTGAGGGC CGGCCGGCACTGGCCAGCTGGCTGACGGCGGTGCGGGAGCGAACCAATCCGTACTACGACGAGGCGCACAAATACGTTTATCGGCTTTCGCCGGACCACATCGTAACGCCGGTCGTTGCGGAAGATGAGTGAATGTTTCGTTCTTTTTGTTGCTACTGTTGCCTAGGTAAAATAAAGATTTTCGATTTCTAAAA CACAAAAAAAAAAAAAAAAAAAAAAggccc                 ]
[-] EMBL CNS09ETS             [                                                                          tGATTATTT GG GGTCCAGCAACTTGAACTTTAAACCCCAACTAGCTCGTTTTGGGGGCAGGGTGCAGAAAAGGCAGCTAGCTTCAATTGCCACCTTGTCCCGTAGTGTTAAACTTTACTATGACCTCTTGTCGCAACCGTCGAGGGCGCTTTAAATATTTTTATCGACCAACAAGATCCCCTTTGACCGGTGCCCGATAGCGCTGCGAAAAATGCAGGACAAAACGGACGAATACCGCCGGCAGGTGAACCGGTACGGCAAGGTGCCCTGCATCGTGGACGGCAGCTTCCGGCTAGCCGAGAGCGTCGCCATCTACCGGTACCTGTGCCGAGAGTTTCCGACCGACGGCCACTGGTACCCGAGCGACACGGTGCGCAAGGCACGCGTCGACGAGTACCTTTCCTGGCAGCACCTAAACCTGCGCGCCGACGTGTCGCTGTACTTT TTCCACGTGTGGCTAAACCCGCTGCTGGGCAAGGAGCCGGACGCCGGCAAGACGGAACGGTTGCGCCGGCGGCTGGACGGTGTGCTGAACTTTTTCGACCAGGGGCTGCTGTCGGCCGGTAGCGGGCAGGCGTTTCTGGCGGGCGATCGCATCAGCATTGCCGACCTATCGGCCGCTTGCGAGATTGGGCAGGCGAAAATAGCCGGGTACGATCCGTGTGAGGGC CGGCCGGGACTGGCCAGCTGGCTGACGGCGGTGCGGGAGCGAACCAATCCGTACTACGACGAGGCGCACAAATACGTTTATTGG TTTCGCCGGACCACATCGTAACGCCGGTCGTTGCGGAAGATGAGTGAATGTTTCGTTCTTTTTGTTGCTACTGTTGCCTAGGTAAAATAAAGATTTT                                                            ]
[+] EMBL BX624946             [                                                                                         TCCAGCAACTTGAACTTGAAACCCCAACTAGCTCGTTTTGGGGGCAGGGTGCAGAAA    AGCTAGCTTCAATTGCCACCATGTCCCGTAGTGTTAAACTTTACTATGACCTCATGTCGCAACCGTCGAGGGCGCTTTACATATTCTTATCGACCAACAAGATCCCCTTTGACCGGTGCCCGATAGCGCTGCGAAAAATGCAGCACAAGACGGACGAATACCGCCGGCAGGTGAATCGGTACGGCAAGGTGCCCTGCATCGTGGACGGCAGCTTCCGGCTAGCCGAGAGCGTCGCCATCTACCGGTACCTGTGCCGAGAGTTTCCGACTGACGGCCACTGGTACCCGAGCGACACGGTGCGCCAGGCACGCGTCGACGAGTACCTTTCCTGGCAGCACCTAAACCTGCGCGCCGACGTGTCGCTATACTTT TTCCACGTGTGGCTAAACCCGCTGCTGGGCAAGGAGCCGGACGCCGGCAAGACGGAACGGTTGCGCAGGCGGCTGGACGGTGTGCTGAACTTTTTCGACCAGGAGCTGCTGTCGGCCGGTAGCGGGCAGGCGTTTCTGGCGGGCGATCGCATCAGCATTGCCGACCTATCGGCCGCTTGCGAGATTGAGCAGGCGAAAATAGCCGGGTACGATCCGTGTGAGGGC CGGCCGGCACTGGCCAGCTGGCTGACGGCGGTGCGGGAGCGAACCAATCCGTTCTACGACGANGCGCACAAATACGTTTATCGGCTTTCGCCGGACCACATCGTAACGCCGGTCGTTGCGGAANATG                                                                                                                   ]
[-] EMBL CNS099H6             [                                                                                                                                                                                 GTAGTGTTAAACTTTACTATGACCTCTTGTCGCAACCGTCGGGGGCGCTTTAAATATTTTTTTCGACCAACAAGATCCCCTTTGACCGGTGCCCGATAGCGCTGCGAAAAATGCAGCACAAAACGGACGAATACCCCCGGCAGGTGAACCGGTACGGCAAGGTGCCCTGCATCGTGGACGGCAGCTTCCGGCTAGCCGAGAGCGTCGCCATCTACCGGTACCTGTGCCGAGAGTTTCCGACCGACGGCCACTGGTACCCGAGCGACACGGTGCGCCAGGCACACGTCGACGAGTACCTTTCCTGGCAGCACCTAAACCTGCGCGCCGACGTGTCGCTGTACTTT TTCCACGTGTGGCTAAACCCGCTGCTGGGCAAGGAGCCGGACGCCGGCAAGACGGAACGGTTGCCCCGGCGGCTGGACGGTGTGCTGAACTTTTTCGACCAGGGGCTGCTGTCGGCCGGTAGCGGGCAGGCGTTTCTGGCGGGCGATCGCATCAGAATTGCCGACCTATCGGCCGCTTGCGAGATTGAGCAGGCGAAAATAGCCGGGTACGATCCGTGTGAGGGC CGGCCGGCACTGGCCAGCTGGCTGACGGCGGTGCGGGAGCGAACCAATCCGTACTACGACGAGGCGCACAAA                                                                                                                                                                          ]
[-] EMBL CNS09316             [                                                                                                                                                                                                                                                     AACAAGATCCCCTTTGAACCGTGCCCGATAGCGCTGCGAAAAATGCAGAACAAAACGGACGAATACCGCCGGCAGGTGAACCGGTACGGCAAGGTGCCCTGCATCGTGGACGGCAGCTTCCGGCTAGCCGAGAGCGTCGCCATCTACCGGTACCTGTGCCGAGAGTTTCCGACCGACGGCCACTGGTACCCGAGCGACACGGTGCGCCAGGCACGCGTCGACGAGTACCTTTCCTGGCAGCACCTAAACCTGCGCGCCGACGTGTCGCTGTACTTT TTCCACGTGTGGCTAAACCCGCTGCTGGGCAAGGAGCCGGACGCCGGCAAGACGGAACGGTTGCGCCGGCGGCTGGACGGTGTGCTGAACTTTTTCGACCAGGGGCTGCTGTCGGCCGGTAGCGGGCAGGCGTTTCTGGCGGGCGATCGCATCAGCATTGCCGACCTATCGGCCGCTTGCGAGATTGAGCAGGCGAAAATAGCCGGGTACGATCCGTGTGAGGGCGCGGCCGGCACTGGCCAGCTGGCTGACGGCGGTGCGGGAGCGAACCAATCCGTACTACGACGAGGC                                                                                                                                                                                 ]




>consensus_9150#0
GATTAAAGCAAGCGGCCGTCTCCTGTTGCTTCTTGGAATACATTGCAAGCAGTAGGTAGT
GGTGACGATTTGTTGGATTATTTGGGGGTCCAGCAACTTGAACTTGAAACCCCAACTAGC
TCGTTTTGGGGGCAGGGTGCAGAAAAGGCAGCTAGCTTCAATTGCCACCATGTCCCGTAG
TGTTAAACTTTACTATGACCTCATGTCGCAACCGTCGAGGGCGCTTTACATATTCTTATC
GACCAACAAGATCCCCTTTGACCGGTGCCCGATAGCGCTGCGAAAAATGCAGCACAAGAC
GGACGAATACCGCCGGCAGGTGAACCGGTACGCAAGGTGCCCTGCATCGTGGACGGCAGC
TTCCGGCTAGCCGAGAGCGTCGCCATCTACCGGTACCTGTGCCGAGAGTTTCCGACCGAC
GGCCACTGGTACCCGAGCGACACGGTGCGCCAGGCACGCGTCGACGAGTACCTTTCCTGG
CAGCACCTAAACCTGCGCGCCGACGTGTCGCTGTACTTTTTCCACGTGTGGCTAAACCCG
CTGCTGGGCAAGGAGCCGGACGCCGGCAAGACGGAACGGTTGCGCCGGCGGCTGGACGGT
GTGCTGAACTTTTTCGACCAGGAGCTGCTGTCGGCCGGTAGCGGGCAGGCGTTTCTGGCG
GGCGATCGCATCAGCATTGCCGACCTATCGGCCGCTTGCGAGATTGAGCAGGCGAAAATA
GCCGGGTACGATCCGTGTGAGGGCCGGCCGGCACTGGCCAGCTGGCTGACGGCGGTGCGG
GAGCGAACCAATCCGTACTACGACGAGGCGCACAAATACGTTTATCGGCTTTCGCCGGAC
CACATCGTAACGCCGGTCGTTGCGGAAGATGAGTGAATGTTTCGTTCTTTTTGTTGCTAC
TGTTGCCTAGGTAAAATAAAGATTTTCGATTTCTAAAACCACAAAAAAAAAAAAAAAAAA
AAAAAAGGCACATGTTCCCGAGCGGG

consensusID : consensus_9150#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 775
fasta sequence

                              [TCTCCTGTTGCTTCTTGGAATACATTGCAAGCACTAGCTTCAATTGCCACCATGTCCCGTAGTGTTAAACTTTACTATGACCTCATGTCGCAACCGTCGAGGGCGCTTTACATATTCTTATCGACCAACAAGATCCCCTTTGACCGGTGCCCGATAGCGCTGCGAAAAATGCAGCACAAGACGGACGAATACCGCCGGCAGGTGAATCGGTACGGCAAGGTGCCCTGCATCGTGGACGGCAGCTTCCGGCTAGCCGAGAGCGTCGCCATCTACCGGTACCTGTGCCGAGAGTTTCCGACCGACGGCCACTGGTACCCGAGCGACACGGTGCGCCAGGCACGCGTCGACGAGTACCTTTCCTGGCAGCACCTAAACCTGCGCGCCGACGTGTCGCTATACTTTTTCCACGTGTGGCTAAACCCGCTGCTGGGCAAGGAGCCGGACGCCGGCAAGACGGAACGGTTGCGCCGGCGGCTGGACGGTGTGCTGAACTTTTTCGACCAGGAGCTGCTGTCGGCCGGTAGCGGGCAGGCGTTTCTGGCGGGCGATCGCATCAGCATTGCCGACCTATCGGCCGCTTGCGAGATTGAGCAGGCGAAAATAGCCGGGTACGATCCGTGTGAGGGCCGGCCGGCACTGGCCAGCTGGCTGACGGCGGTGCGGGAGCGAACCAATCCGTACTACGACGAGGCGCACNAATACGTTTATCGGCTTTCGCCGGACCACATCGTAACGCCNGTCGTTGCGGAAGATGAGTGAATGGTTCGTTCTTTTT]

[+] EMBL BX620526             [TCTCCTGTTGCTTCTTGGAATACATTGCAAGCACTAGCTTCAATTGCCACCATGTCCCGTAGTGTTAAACTTTACTATGACCTCATGTCGCAACCGTCGAGGGCGCTTTACATATTCTTATCGACCAACAAGATCCCCTTTGACCGGTGCCCGATAGCGCTGCGAAAAATGCAGCACAAGACGGACGAATACCGCCGGCAGGTGAATCGGTACGGCAAGGTGCCCTGCATCGTGGACGGCAGCTTCCGGCTAGCCGAGAGCGTCGCCATCTACCGGTACCTGTGCCGAGAGTTTCCGACCGACGGCCACTGGTACCCGAGCGACACGGTGCGCCAGGCACGCGTCGACGAGTACCTTTCCTGGCAGCACCTAAACCTGCGCGCCGACGTGTCGCTATACTTTTTCCACGTGTGGCTAAACCCGCTGCTGGGCAAGGAGCCGGACGCCGGCAAGACGGAACGGTTGCGCCGGCGGCTGGACGGTGTGCTGAACTTTTTCGACCAGGAGCTGCTGTCGGCCGGTAGCGGGCAGGCGTTTCTGGCGGGCGATCGCATCAGCATTGCCGACCTATCGGCCGCTTGCGAGATTGAGCAGGCGAAAATAGCCGGGTACGATCCGTGTGAGGGCCGGCCGGCACTGGCCAGCTGGCTGACGGCGGTGCGGGAGCGAACCAATCCGTACTACGACGAGGCGCACNAATACGTTTATCGGCTTTCGCCGGACCACATCGTAACGCCNGTCGTTGCGGAAGATGAGTGAATGGTTCGTTCTTTTT]
[+] EMBL AF515525             [                                                            AGTGTTAAACTTTACTATGACCTCATGTCGCAACCGTCGAGGGCGCTTTACATATTCTTATCGACCAACAAGATCCCCTTTGACCGGTGCCCGATAGCGCTGCGAAAAATGCAGCACAAGACGGACGAATACCGCCGGCAGGTGAATCGGTACGGCAAGGTGCCCTGCATCGTGGACGGCAGCTTCCGGCTAGCCGAGAGCGTCGCCATCTACCGGTACCTGTGCCGAGAGTTTCCGACCGACGGCCACTGGTACCCGAGCGACACGGTGCGCCAGGCACGCGTCGACGAGTACCTTTCCTGGCAGCACCTAAACCTGCGCGCCGACGTGTCGCTATACTTTTTCCACGTGTGGCTAAACCCGCTGCTGGGCAAGGAGCCGGACGCCGGCAAGACGGAACGGTTGCGCCGGCGGCTGGACGGTGTGCTGAACTTTTTCGACCAGGAGCTGCTGTCGGCCGGTAGCGGGCAGGCGTTTCTGGCGGGCGATCGCATCAGCATTGCCGACCTATCGGCCGCTTGCGAGATTGAGCAGGCGAAAATAGCCGGGTACGATCCGTGTGAGGGCCGGCCGGCACTGGCCAGCTGGCTGACGGCGGTGCGGGAGCGAACCAATCCGTACTACGACGAGGCGCACAAATACGTTTATCGGCTTTCGCCGGACCACATCGTAACGCCGGTCGTTGCGGA                          ]




>consensus_9150#1
TCTCCTGTTGCTTCTTGGAATACATTGCAAGCACTAGCTTCAATTGCCACCATGTCCCGT
AGTGTTAAACTTTACTATGACCTCATGTCGCAACCGTCGAGGGCGCTTTACATATTCTTA
TCGACCAACAAGATCCCCTTTGACCGGTGCCCGATAGCGCTGCGAAAAATGCAGCACAAG
ACGGACGAATACCGCCGGCAGGTGAATCGGTACGGCAAGGTGCCCTGCATCGTGGACGGC
AGCTTCCGGCTAGCCGAGAGCGTCGCCATCTACCGGTACCTGTGCCGAGAGTTTCCGACC
GACGGCCACTGGTACCCGAGCGACACGGTGCGCCAGGCACGCGTCGACGAGTACCTTTCC
TGGCAGCACCTAAACCTGCGCGCCGACGTGTCGCTATACTTTTTCCACGTGTGGCTAAAC
CCGCTGCTGGGCAAGGAGCCGGACGCCGGCAAGACGGAACGGTTGCGCCGGCGGCTGGAC
GGTGTGCTGAACTTTTTCGACCAGGAGCTGCTGTCGGCCGGTAGCGGGCAGGCGTTTCTG
GCGGGCGATCGCATCAGCATTGCCGACCTATCGGCCGCTTGCGAGATTGAGCAGGCGAAA
ATAGCCGGGTACGATCCGTGTGAGGGCCGGCCGGCACTGGCCAGCTGGCTGACGGCGGTG
CGGGAGCGAACCAATCCGTACTACGACGAGGCGCACNAATACGTTTATCGGCTTTCGCCG
GACCACATCGTAACGCCNGTCGTTGCGGAAGATGAGTGAATGGTTCGTTCTTTTT

consensusID : consensus_9150#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 404
fasta sequence

                              [CAGCAACTTGAACTTGAAACCCCAACTAGCTCGTTTTGGGGGCAGGGTGCAGAAAAGGCAGGTACTCTTAGCTTTAAACGTTGCAAACATTTAAAGAAATGCAATTTATTGTGCGCAATTTAGTAAGCGGTTAGTTTATTACATTCAATGATCCCTTTTTCCCGCTTTCCAGCTAGCTTCAATTGCCACCATGTCCCGTAGTGTTAAACTTTACTATGACCTCATGTCGCAACCGTCGAGGGCGCTTTACATATTCTTATCGACCAACAAGATCCCCTTTGACCGGTGCCCGATAGCGCTGCGAAAAATGCAGCACAAGACGGACGAATACCGCCGGCAGGTGAACCGGTACGCAAAGGTGCCCTGCATCGTGGACGGCAGCTTCCGGCTAGCCGAGAGCGTCG]

[+] EMBL CNS08NXI             [CAGCAACTTGAACTTGAAACCCCAACTAGCTCGTTTTGGGGGCAGGGTGCAGAAAAGGCAGGTACTCTTAGCTTTAAACGTTGCAAACATTTAAAGAAATGCAATTTATTGTGCGCAATTTAGTAAGCGGTTAGTTTATTACATTCAATGATCCCTTTTTCCCGCTTTCCAGCTAGCTTCAATTGCCACCATGTCCCGTAGTGTTAAACTTTACTATGACCTCATGTCGCAACCGTCGAGGGCGCTTTACATATTCTTATCGACCAACAAGATCCCCTTTGACCGGTGCCCGATAGCGCTGCGAAAAATGCAGCACAAGACGGACGAATACCGCCGGCAGGTGAACCGGTACGCAAAGGTGCCCTGCATCGTGGACGGCAGCTTCCGGCTAGCCGAGAGCGTCG]




>consensus_9150#2
CAGCAACTTGAACTTGAAACCCCAACTAGCTCGTTTTGGGGGCAGGGTGCAGAAAAGGCA
GGTACTCTTAGCTTTAAACGTTGCAAACATTTAAAGAAATGCAATTTATTGTGCGCAATT
TAGTAAGCGGTTAGTTTATTACATTCAATGATCCCTTTTTCCCGCTTTCCAGCTAGCTTC
AATTGCCACCATGTCCCGTAGTGTTAAACTTTACTATGACCTCATGTCGCAACCGTCGAG
GGCGCTTTACATATTCTTATCGACCAACAAGATCCCCTTTGACCGGTGCCCGATAGCGCT
GCGAAAAATGCAGCACAAGACGGACGAATACCGCCGGCAGGTGAACCGGTACGCAAAGGT
GCCCTGCATCGTGGACGGCAGCTTCCGGCTAGCCGAGAGCGTCG

consensusID : consensus_9150#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 400
fasta sequence

                              [AAAAGCAGCACAAGACGGACGAATACCGCCGGCAGGGGAACCGGGACGGCAAGGTGCCCTGCATCGTGGACGGCAGCTACCGGCTAGCCGAGAGCGGCGCCATCTACCGGGACCTGGGCCGAGAGGGGCCGACCGACGGCCACTGGGACCCGAGCGACACGGAGCGCCAGGCACGCGCCGACGAGGACCTTTCCTGGCAGCACCAAAACCAGCGCGCCGACGGGACGCCGGACATTTTCCACGGGCGGCAAAACCCGCCGCCGGGCAAGGAGCCGGACGCCGGCAAGACGGAACGGGTGCGCCGGCGGCCGGACGGGGGGCCGAACTATATCGACCAGGAGCAGCCGCCGGCCGGGAGCGGGCAGGCGTTCCCGGCGGGCGAACGCAACAGCAAGGCCGA]

[+] EMBL BX603668             [AAAAGCAGCACAAGACGGACGAATACCGCCGGCAGGGGAACCGGGACGGCAAGGTGCCCTGCATCGTGGACGGCAGCTACCGGCTAGCCGAGAGCGGCGCCATCTACCGGGACCTGGGCCGAGAGGGGCCGACCGACGGCCACTGGGACCCGAGCGACACGGAGCGCCAGGCACGCGCCGACGAGGACCTTTCCTGGCAGCACCAAAACCAGCGCGCCGACGGGACGCCGGACATTTTCCACGGGCGGCAAAACCCGCCGCCGGGCAAGGAGCCGGACGCCGGCAAGACGGAACGGGTGCGCCGGCGGCCGGACGGGGGGCCGAACTATATCGACCAGGAGCAGCCGCCGGCCGGGAGCGGGCAGGCGTTCCCGGCGGGCGAACGCAACAGCAAGGCCGA]




>consensus_9150#3
AAAAGCAGCACAAGACGGACGAATACCGCCGGCAGGGGAACCGGGACGGCAAGGTGCCCT
GCATCGTGGACGGCAGCTACCGGCTAGCCGAGAGCGGCGCCATCTACCGGGACCTGGGCC
GAGAGGGGCCGACCGACGGCCACTGGGACCCGAGCGACACGGAGCGCCAGGCACGCGCCG
ACGAGGACCTTTCCTGGCAGCACCAAAACCAGCGCGCCGACGGGACGCCGGACATTTTCC
ACGGGCGGCAAAACCCGCCGCCGGGCAAGGAGCCGGACGCCGGCAAGACGGAACGGGTGC
GCCGGCGGCCGGACGGGGGGCCGAACTATATCGACCAGGAGCAGCCGCCGGCCGGGAGCG
GGCAGGCGTTCCCGGCGGGCGAACGCAACAGCAAGGCCGA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9150#1      ------------------------------------------------------------
consensus_9150#3      ------------------------------------------------------------
consensus_9150#0      GATTAAAGCAAGCGGCCGTCTCCTGTTGCTTCTTGGAATACATTGCAAGCAGTAGGTAGT 60
consensus_9150#2      ------------------------------------------------------------
                                                                                  

consensus_9150#1      ----------------------------------------------------------TC 2
consensus_9150#3      ------------------------------------------------------------
consensus_9150#0      GGTGACGATTTGTTGGATTATTTGGGGGTCCAGCAACTTGAACTTGAAACCCCAACTAGC 120
consensus_9150#2      ------------------------------------------------------------
                                                                                  

consensus_9150#1      TCCTGTTGCTTCTTGGAATACATTGCAAGCACTAGCTTCAATTGCCACCATGTCCCGTAG 62
consensus_9150#3      ------------------------------------------------------------
consensus_9150#0      TCGTTTTGGGGGCAGGGTGCAGAAAAGGCAGCTAGCTTCAATTGCCACCATGTCCCGTAG 180
consensus_9150#2      ------------------------------------------------------------
                                                                                  

consensus_9150#1      TGTTAAACTTTACTATGACCTCATGTCGCAACCGTCGAGGGCGCTTTACATATTCTTATC 122
consensus_9150#3      ------------------------------------------------------------
consensus_9150#0      TGTTAAACTTTACTATGACCTCATGTCGCAACCGTCGAGGGCGCTTTACATATTCTTATC 240
consensus_9150#2      ------------------------------------------------------------
                                                                                  

consensus_9150#1      GACCAACAAGATCCCCTTTGACCGGTGCCCGATAGCGCTGCGAAAAATGCAGCACAAGAC 182
consensus_9150#3      --------------------------------------------AAAAGCAGCACAAGAC 16
consensus_9150#0      GACCAACAAGATCCCCTTTGACCGGTGCCCGATAGCGCTGCGAAAAATGCAGCACAAGAC 300
consensus_9150#2      ----------------------------------CAGCAACTTGAACTTGAAACCCCAAC 26
                                                                  **    *   *   **

consensus_9150#1      GGACGAATACCGCCGGCAGGTGAATCGGTACGGCAAGGTGCCCTGCATCGTGGACGGCAG 242
consensus_9150#3      GGACGAATACCGCCGGCAGGGGAACCGGGACGGCAAGGTGCCCTGCATCGTGGACGGCAG 76
consensus_9150#0      GGACGAATACCGCCGGCAGGTGAACCGGTACG-CAAGGTGCCCTGCATCGTGGACGGCAG 359
consensus_9150#2      TAGCTCGTTTTGGGGGCAGG-GTGCAGAAAAGGCA-GGTACTCTTAGCTTTAAACG-TTG 83
                         *   *   *  ****** *    *  * * ** *** * **      *  ***   *

consensus_9150#1      CTTCCGGCTAGCCGAGAGCGTCGCCATCTACCGGTACCTGT---GCCGAGAGTTTCCGAC 299
consensus_9150#3      CTACCGGCTAGCCGAGAGCGGCGCCATCTACCGGGACCTGG---GCCGAGAGGGGCCGAC 133
consensus_9150#0      CTTCCGGCTAGCCGAGAGCGTCGCCATCTACCGGTACCTGT---GCCGAGAGTTTCCGAC 416
consensus_9150#2      CAAACATTTAAAGAAATGCAAT-TTATTGTGCGCAATTTAGTAAGCGGTTAGTTTATTAC 142
                      *   *   **    *  **      **    **  *  *     ** *  **      **

consensus_9150#1      ---CGACGGCCACTGGTACCCGAGCGACACGGTGCGCCAGG------CACGCGTCGACGA 350
consensus_9150#3      ---CGACGGCCACTGGGACCCGAGCGACACGGAGCGCCAGG------CACGCGCCGACGA 184
consensus_9150#0      ---CGACGGCCACTGGTACCCGAGCGACACGGTGCGCCAGG------CACGCGTCGACGA 467
consensus_9150#2      ATTCAATGATCCCTTTTTCCCGCTTTCCAGCTAGCTTCAATTGCCACCATGTCCCGTAGT 202
                         * * *  * **    ****     **    **  **        ** *   **  * 

consensus_9150#1      G--TACCTTTCCTGGCAGCACCTAAACCTGCGCGCCGACGTGTCGCTATACTTTTTCCAC 408
consensus_9150#3      G--GACCTTTCCTGGCAGCACCAAAACCAGCGCGCCGACGGGACGCCGGACATTTTCCAC 242
consensus_9150#0      G--TACCTTTCCTGGCAGCACCTAAACCTGCGCGCCGACGTGTCGCTGTACTTTTTCCAC 525
consensus_9150#2      GTTAAACTTTACTATGACCTCATGTCGCAAC-CGTCGAGGGCGCTTTACATATTCTTATC 261
                      *   * **** **   * * *      *  * ** *** *   *     *  ** *   *

consensus_9150#1      GTGTGGCTAAACCCGCTGCTGGGCAAGGAGCCGGACGCCGGCAAGACGGAACGGTTGCGC 468
consensus_9150#3      GGGCGGCAAAACCCGCCGCCGGGCAAGGAGCCGGACGCCGGCAAGACGGAACGGGTGCGC 302
consensus_9150#0      GTGTGGCTAAACCCGCTGCTGGGCAAGGAGCCGGACGCCGGCAAGACGGAACGGTTGCGC 585
consensus_9150#2      GACCAACAAGATCC-CCTTTGACC--GGTGCCCGATAGCGCTGCGAAAAATGCAGCACAA 318
                      *     * * * ** *    *  *  ** *** **   **    **   *       *  

consensus_9150#1      CGGCGGCTGGACGGTGTGCTGAACTTTTTCGACCAGGAGCTGCTGTCGGCCGGTAGCGGG 528
consensus_9150#3      CGGCGGCCGGACGGGGGGCCGAACTATATCGACCAGGAGCAGCCGCCGGCCGGGAGCGGG 362
consensus_9150#0      CGGCGGCTGGACGGTGTGCTGAACTTTTTCGACCAGGAGCTGCTGTCGGCCGGTAGCGGG 645
consensus_9150#2      -GACGGACGAATACCGCCGGCAGGTGAACCGGTACGCAAAGGTGCCCTGC--ATCGTGGA 375
                       * ***  * *    *     *  *    **    * *   *    * **     * ** 

consensus_9150#1      CAGGCGTTTCTGGCGGGC-GATCGCATCAGCATTGCCGACCTATCGGCCGCTTGCGAGAT 587
consensus_9150#3      CAGGCGTTCCCGGCGGGC-GAACGCAACAGCAAGGCCGA--------------------- 400
consensus_9150#0      CAGGCGTTTCTGGCGGGC-GATCGCATCAGCATTGCCGACCTATCGGCCGCTTGCGAGAT 704
consensus_9150#2      CGGCAGCTTCCGGCTAGCCGAGAGCGTCG------------------------------- 404
                      * *  * * * ***  ** **  **  *                                

consensus_9150#1      TGAGCAGGCGAAAATAGCCGGGTACGATCCGTGTGAGGGCCGGCCGGCACTGGCCAGCTG 647
consensus_9150#3      ------------------------------------------------------------
consensus_9150#0      TGAGCAGGCGAAAATAGCCGGGTACGATCCGTGTGAGGGCCGGCCGGCACTGGCCAGCTG 764
consensus_9150#2      ------------------------------------------------------------
                                                                                  

consensus_9150#1      GCTGACGGCGGTGCGGGAGCGAACCAATCCGTACTACGACGAGGCGCACNAATACGTTTA 707
consensus_9150#3      ------------------------------------------------------------
consensus_9150#0      GCTGACGGCGGTGCGGGAGCGAACCAATCCGTACTACGACGAGGCGCACAAATACGTTTA 824
consensus_9150#2      ------------------------------------------------------------
                                                                                  

consensus_9150#1      TCGGCTTTCGCCGGACCACATCGTAACGCCNGTCGTTGCGGAAGATGAGTGAATGGTTCG 767
consensus_9150#3      ------------------------------------------------------------
consensus_9150#0      TCGGCTTTCGCCGGACCACATCGTAACGCCGGTCGTTGCGGAAGATGAGTGAATGTTTCG 884
consensus_9150#2      ------------------------------------------------------------
                                                                                  

consensus_9150#1      TTCTTTTT---------------------------------------------------- 775
consensus_9150#3      ------------------------------------------------------------
consensus_9150#0      TTCTTTTTGTTGCTACTGTTGCCTAGGTAAAATAAAGATTTTCGATTTCTAAAACCACAA 944
consensus_9150#2      ------------------------------------------------------------
                                                                                  

consensus_9150#1      ------------------------------------------
consensus_9150#3      ------------------------------------------
consensus_9150#0      AAAAAAAAAAAAAAAAAAAAAAGGCACATGTTCCCGAGCGGG 986
consensus_9150#2      ------------------------------------------