cluster # 9160

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Anopheles gambiae
cluster # 9160 cluster # 9160 Sequences # 14 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9160#0 length = 1861 sequences # 12

consensus_9160#1 length = 627 sequences # 1
consensus_9160#2 length = 154 sequences # 1

consensusID : consensus_9160#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 12
consensus length = 1861
fasta sequence

                              [TTTATTGATCGTGAATGATCATGGGAACTATCCCATTTATGTAATGCCCGTTGTCTACCAACAAGCGTTAACACATACACAGCCAAACATACATATACACGGTACCGTGAATTACATGCAGTGATAATTATTTCATAT-GCTCTCCCACTTCCCCATGGCGCGTCTCTGCCAAACCCCCGTTAAAAATTGACAATTTTCCCTCTAAACAAACAGCATTTTCGAGGAATTGT-CGCGATATATAAGATAAA-GTTTCATCTCAGTGGGAAGATCGAGCGACTGGAGCCGCCCATTCATAATCTGCACCTTGTCCGGCGCCAACCGGTTCATGTTTCTCCACACAACCTCCCGCACGGTGTCCCGGGCGAA-CGTTTCAGCGTAAACAGCTCAAACTGGGGCCTGCCCATAATACTGTAGATCGCCCGCCACGTGCCAAACCGGTACAGCAGCCACTGGTATAGTGGATTCTTCGGTATGGCATCGTTGATGCGGCGCGCCAAAAATCCATAAGAACAATACTTCAGACATGGAAAAATCATGTCCATCTTTGTGCGTACAACTTCGGTGAGTAAATGTTTAACGAGTGCATCCAGCTCGGTGCCGTTCAGCAGGGCCAGATAATCGATGGCACGCTGATACTGCTCGTACAGCAGCGCGTTAATCTTGACGTTGTCCAGCGCGTGAATTTCCATCACGACCGCCGGCATAATGTTGCGTACGGTTTGTTTCAGGGTTTTCAACGATGCGTTGCTAAATGCTACAAAATCTTCCAACAGCTGGCTCACCTCGTCGGCGGAACGCTG-CTCGTCGCCCTGGATGAAAAATGTTAACAAGCGTACCAAATCGGCGGTCAGCAGCGGCACGCAGCAAACCAGCGGCCAGGTATATTCGAGCTCGGCCCGTTCCGCCGTGACCGGGCCACACTCGCACAGCACCAGCAGCGCCAACAGCCCGTAGTCGGGAATCAGTCTTTCGTACAAAGAGCGAACACGTTCCTGCTTTTCCCACTTCAGTTCCGTTTCGATGAAATACGGGATCAGGGAGGACTGGGAGCGATAGCTAAGCAGTGCGGGCTTAAGTATGTCGTTCACATCGTACCGCTGGCGGTACATGTGGTTCGGGTGTTCCAGGTTGTACAGGATTTTGAAGCACGCGACCTTGTTGC-GCGC-GGAACAGGGC-CCCC-GAGCACTAAATATATCGATCACGTTAAAATCGGCATCGTCGGCCGC-GTTCAGGAACTGCCACTTGGCTTTGGCGATAAATAGCAAATAGATTAAAATTTCAATATTGCCCGTGTCGAACGCGGCCGTATGGAGGGCGGTTTCGTCCGCGTAGTCGTTCAGGTTGACATCGGCA-CCGTGCGCTATCAGCAGCTCGACCAGATCCAGCCGATCGTTCGACACGGCGTAGTGGAGCGGCGTGATGCTCTCCGTGTCCCCCGTGTTGACCACGCTGCGGTCCAGACGCAACAGGTAGCTCACGATGTCGGCCGACACGGACTGCTCGCAGGCGCGCGCCAGCGGGGTGAGCCCTTCGTAGCACTGCACGTTGGTGGCGGGATGGAAGTGGTCCACCACCAGCTTGACGCAGT-CCAGA-TTGCGGCTGACGACGGCGTGG-TGCAG-TATG-TTCCAGTGATGGTTGTCGAACCGCTTGCCAAAGTCTGGCCGCGGTGCCTTGGCATGGG-TCAGCTGGCGCAGCTTCTCCATGTCGCCCTTCATAACGGCGTTCCACACCTCGTTCGCCTTCATCGTAACCTCGCACGCCCGCACGCACACGGGTGCACCACGTTCGATCCACCAACAAAAGCTTATTGCGTTTTACAAGTCCTAACTTGTTTCAAAATACGTCAACCCGGTCTTTTCGG]

[+] EMBL CNS09LNN             [TTTATTGATCGTGAATGATCATGGGAACTATCCCATTTATGTAATGCCCGTTGTCTACCAACAAGCGTTAACACATACACAGCCAAACATACATATACACGGTACCGTGAATTACATGCAGTGATAATTATTTCATAT GCTCTCCCACTTCCCCATGGCGCGTCTCTGCCAAACCCCCGTTAAAAATTGACAATTTTCCCTCTAAACAAACAGCATTTTCGAGGAATTGT CGCGATATATAAGATAAA GTTTCATCTCAGTGGGAAGATCGAGCGACTGGAGCCGCCCATTCATAATCTGCACCTTGTCCGGCGCCAACCGGTTCATGTTTCTCCACACAACCTCCCGCACGGTGTCCCGGGCGAA CGTTTCAGCGTAAACAGCTCAAACTGGGGCCTGCCCATAATACTGTAGATCGCCCGCCACGTGCCAAACCGGTACAGCAGCTTCTGGTATAGTGGATTCTTCGGTATGGCATCGTTGATGCGGCGCGCCAAAAATCCATAAGAACAATACTTCAGACATGGAAAAATCATGTCCATCTTTGTGCGTACAACTTCGGTGAGTAAATGTTTAACGAGTGCATCCAGCTCGGTGCCGTTCAGCAGGGCCAGATAATCGATGGCACGCTGATACTGCTCGTACAGCAGCGCGTTAATCTTGACGTTGTCCAGCGCGTGAATTTCCATCACGACCGCCGGCATAATGTTGCGTACGGTTTGTTTCAGGGTTTTCAACGATGCGTTGCTAAATGCTACAAAATCTTCCAACAGCTGGCTCACCTCGTCGGCGGAAC CTGACTCGTCGCCCTGGATGAAAAATGTTAACAAGCGTACCAAATCGGCGGTCAGCAGCGGCACG AGCAAACCAGCGGCCAGGTATATTCGAGCTCGGCCCGTTCCGCCGTGACCGGGCCACACTCGCACAGCACCAGCAGCGCCAACAGCCCGTAGTCGGGAATCAGTCTTTCGTACAAAGttc                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CNS08VEH             [                 ATCATGGGAACTATCCCATTTATGTAATGCCCGTTGTCTACCAACAAGCGTTAACACATACACAGCCAAACATACATATACACGGTACCGTGAATTACATGCAGTGATAATTATTTCATAT GCTCTCCCACTTCCCCATGGCGCGTCTCTGCCAAACCCCCGTTAAAAATTGACAATTTTCCCTCTAAACAAACAGCATTTTCGAGGAATTGTCCGCGATATATAAGATAAAGGTTTCATCTCAGTGGGAAGATCGAGCGACTGGAG CG CCATTCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CNS08FW6             [                             ATCCCATTTATGTAATGCCCGTTGTCTACCAACAAGCGTTAACACATACACAGCCAAACATACATATACACGGTACCGTGAATTACATGCAGTGATAATTATTTCATATACCTCTCCCACTTCCCCATGGCGCGTCTCTGCCAAACCCCCGTTAAAAATTGACAATTTTCCCTCTAAACAAACAGCATTTTCGAGGAATTGT CGCGATATATAAGATAAA GTTTCATCTCAGTGGGAAGATCGAGCGACTGGAGCCGCCCATTCATAATCTGCACCTTGTCCGGCGCCAACCGGTTCATGTTTCTCCACACAACCTCCCGCACGGTGTCCCGGGCGAA CGTTTCAGCGTAAACAGCTCAAACTGGGGCCTGCCCATAATACTGTAGATCGCCCGCCACGTGCCAAACCGGTTCAGCAGCCACTGGTATAGTGGATTCTTCGGTATGGCATCGTTGATGCGGCGCGCCAAAAATCCATAAGAACAATACTTCAGACATGGAAAAATCATGTCCATCTTTGTGCGTACAACTTCGGTGAGTAAATGTTTAACGAGTGCATC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CNS08UYR             [                                                    GTCTACCAACAAGCGTTAACACATACACAGCCAAACATACATATACACGGTACCGTGAATTACATGCAGTGATAATTATTTCATAT GCTCTCCCACTTCCCCATGGCGCGTCTCTGCCAAACCCCCGTTAAAAATTGACAATTTTCCCTCTAAACAAACAGCATTTTCGAGGAATTGT CGCGATATATAAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL BX612708             [                                                                      ACACATACACAGCCAAACATACATATACACGGTACCGTGAATTACATGCAGTGATAATTATTTCATAT GCTCTCCCACTTCCCCATGGCGCGTCTCTGCCAAACCCCCGTTAAAAATTGACAATTTTCCCTCTAAACAAA AGCATTTTCGAGGAATTGT CGCGATATATAAGATAAA GTTTCATCTCAGTGGGAAGATCGAGCGACTGGAGCCGCCCATTCATAATCTGCACCTTGTCCGGCGCCAACCGGTTCATGTTTCTCCACACAACCTCCCGCACGGTGTCCCGGGCGAAGCGTTTCAGCGTAAACAGCTCAAACTGGGGCCTGCCCATAATACTGTAGATCGCCCGCCACGTGCCAAACCGGTACAGCAGCCACTGGTATAGTGGATTCTTCGGTATGGCATCGTTGATGCGGCGCGCCAAAAATCCATAAGAACAATACTTCAGACATGGAAAAATCATGTCCATCTTTGTGCGTACAACTTCGGTGAGTAAATGTTTAACGAGTGCATCCAGCTCGGTGCCGTTCAGCAGGGCCAGATAATCGATGGCACGCTGATACTGCTCGTACAGCAGCGCGTTAATCTTGACGTTATCCAGCGCGTGAATTTCCATCACGACCGCCGGCATAATGTTGCGTACGGTTTGTTTCAGGGTTTTCAACGATGCGTTGCTAAATGCTACAAAATCTTCCAACAGCTGCCTCACCGCGTCGGCGGGCCGCTG CTCGTCGCCCTGGATGAAAAATGTTAACAAGCGTACCAAATCGGCGGTCAGCAGCGGCACGCAGCAAACCAGCGGCCAGGTATACTCGAGCTCGGCCCGTTCCGCCGTAACCGGGCCACACTCGCACAGCACCAGCAGCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL AL934454             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GCTCACCTCGTCGGCGGAACGCTG CTCGTCGCCCTGGATGAAAAATGTTAACAAGCGTACCAAATC GCGGTCAGCAGCGGCACGCAGCAAACCAGCGGCCAGGTATATTCGAGCTCGGCCCGTTCCGCCGTGACCGGGCCACACTCGCACAGCACCAGCAGCGCCAACAGCTCGTAGTCGGGAATCAGTCTTTCGTACAAAGAGCGAACACGTTCCTGCTTTTCCCACTTCAGTTCCGTTTCGATGAAATACGGGATCAGGGAGGACTGGGAGCGATAGCTAAGCAGTGCGGGCTTAAGTATGTCGTTCACATCGTACCGCTGGCGGTACATGTGGTTCGGGTGTTCCAGGTTGTACAGGATTTTGAAGCACGCGACCTTGTTGCAGCGCAGGAACAGGGCACCCCNGAGCACTAAATATATCGATCACGTTAAAATCGGCATCGTCGGCCGCAGTTCAGGAACTGCCACTTGGCTTTGGCGATAAATAGCAAATAGATTAAAATTTCAATATTGCCCGTGTCGAACGCGGCCGTATGGAGGGCGGTTTCGTCCGCGTAGTCGTTCAGGTTGACATCCGCA CCGTGCGCTATCAnn                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL CNS09LNM             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GTCGGCGGAACGCTG CTCGTCGCCCTGGATGAAAAATGTTAACAAGCGTACCAAATCGGCGGTCAGCAGCGGCACGCAGCAAACCAGCGGCCAGGTATATTCGAGCTCGGCCCGTTCCG CGTGACCGGGCCACACTCGCACAGCACCAGCAGCGCCAACAGCCCGTAGTCGGGAATCAGTCTTTCGTACAAAGAGCGAACACGTTCCTGCTTTTCCCACTTCAGTTCCGTTTCGATGAAATACGGGATCAGGGAGGACTGGGAGCGATAGCTAAGCAGTGCGGGCTTAAGTATGTCGTTCACATCGTACCGCTGGCGGTACATGTGGTTCGGGTGTTCCAGGTTGTACAGGATTTTGAAGCACGCGACCTTGTTGC GCGC GGAACAGGGC CCCC GAGCACTAAATATATCGATCACGTTAAAATCGGCATCGTCGGCCGC GTTCAGGAACTGCCACTTGGCTTTGGCGATAAATAGCAAATAGATTAAAATTTCAATATTGCCCGTGTCGAACGCGGCCGTATGGAGGGCGGTTTCGTCCGCGTAGTCGTTCAGGTTGACATCCGCA CCGTGCGATATCAGCAGCTCGACCAGATCCAGCCGATCGTTCGACACGGCGTAGTGGAGCGGCGTGATGCTCTCCGTGTCCCCCGTGTTGACCACGCTGCGGTCCAGACGCAACAGGTAGCTCACGATGTCGGCCGACACGGACTGCTCGCAGGCGCGCGCCAGCGGGGTGAGCCCTTCGTAGCACTGCACGTTGGTGGCGGGATGGAAGCGATCCACCACCAGCTTGACGCAGT CCAGA TTGCGGCTGACGACGGCGTGG TGCAG TATG TTCCAGTGATGGTTGTCGAACCGCTTGCCAAAGTCTGGCCGCGG                                                                                                                                                                                                   ]
[-] EMBL BM654935             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        TTTGAAGCACGCGACCTTGTTGC GCGC GGAACAGGGC CCCC GAGCGCTAAATATATCGATCACGTTAAAATCGGCATCGTCGGCCGC GTTCAGGAACTGCCACTTGGCTTTGGCGATAAATAGCAAATAGATTAAAATTTCAATATTGCCCGTGTCGAACGCGGCCGTATGGAGGGCGGTTTCGTCCGCGTAGTCGTTCAGGTTGACATCGGCA CCGTGCGCTATCAGCAGCTCGACCAGATCCAGCCGATCGTTCGACACGGCGTAGTGGAGCGGCGTGATGCTCTCCGTGTCCCCCGTGTTGACCACGCTGCGGTCCAGACGCAACAGGTAGCTCACGATGTCGGCCGACACGGACTGCTCGCAGGCGCGCGCCAGCGGGGTGAGCCCTTCGTAGCACTGCACGTTGGTGGCGGGATGGAAGTGGTCCACCACCAGCTTGACGCAGT CCAGA TTGCGGCTGACGACGGCGTGG TGCAG TATG TTCCAGTGATGGTTGTCGAACCGCTTGCCAAAGTCTGGCCGCGGTGCCTTGGCATGGG TCAGCTGGCGCAGCTTCTCCATGTCGCCCTTCATAACGGCGTTCCACACCTCGTTCGCCTTCATCGTAACCTCGCACGCCCGCACGCACACGGGTGCACCACGTTCGATCCACCAACAAAAGCTTATTGCGTTTTACcgg                                        ]
[-] EMBL BM627201             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GTTAAAATCGGCATCGTCGGCCGC GTTCAGGAACTGCCACTTGGCTTTGGCGATAAATAGCAAATAGATTAAAATTTCAATATTGCCCGTGTCGAACGCGGCCGTATGGAGGGCGGTTTCGTCCGCGTAGTCGTTCAGGTTGACATCGGCACCCGTGCGCTATCAGCAGCTCGACCAGATCCAGCCGATCGTTCGACACGGCGTAGTGGAGCGGCGTGATGCTCTCCGTGTCCCCCGTGTTGACCACGCTGCGGTCCAGACGCAACAGGTAGCTCACGATGTCGGCCGACACGGACTGCTCGCAGGCGCGCGCCAGCGGGGTGAGCCCTTCGTAGCACTGCACGTTGGTGGCGGGATGGAAGTGGTCCACCACCAGCTTGACGCAGT CCAGA TTGCGGCTGACGACGGCGTGG TGCAG TATG TTCCAGTGATGGTTGTCGAACCGCTTGCCAAAGTCTGGCCGCGGTGCCTTGGCATGGG TCAGCTGGCGCAGCTTCTCCATGTCGCCCTTCATAACGGCGTTCCACACCTCGTTCGCCTTCATCGTAACCTCGCACGCCCGCACGCACACGGGTGCACCACGTTCGATCCACCAACAAAAGCTTATTGCGTTTTACAAGTCCTAACTTGTTTCAAAATACGTCAACCCGG         ]
[-] EMBL BM634994             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ACTGCCACTTGGCTTTGGCGATAAATAGCAAATAGATTAAAATTTCAATATTGCCCGTGTCGAACGCGGCCGTATGGAGGGCGGTTTCGTCCGCGTAGTCGTTCAGGTTGACATCGGCA CCGTGCGCTATCAGCAGCTCGACCAGATCCAGCCGATCGTTCGACACGGCGTAGTGGAGCGGCGTGATGCTCTCCGTGTCCCCCGTGTTGACCACGCTGCGGTCCAGACGCAACAGGTAGCTCACGATGTCGGCCGACACGGACTGCTCGCAGGCGCGCGCCAGCGGGGTGAGCCCTTCGTAGCACTGCACGTTGGTGGCGGGATGGAAGTGGTCCACCACCAGCTTGACGCAGT CCAGA TTGCGGCTGACGACGGCGTGG TGCAG TATG TTCCAGTGATGGTTGTCGAACCGCTTGCCAAAGTCTGGCCGCGGTGCCTTGGCATGGG TCAGCTGGCGCAGCTTCTCCATGTCGCCCTTCATAACGGCGTTCCACACCTCGTTCGCCTTCATCGTAACCTCGCACGCCCGCACGCACACGGGTGCACCACGTTCGATCCACCAACAAAAGCTTATTGCGTTTTACAAGTCCTAACTTGTTTCAAAATACGTCAACCCATTCTTTTCGG]
[-] EMBL AGA282909            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ctTTGACGCAGTGCCAGATTTGCGGCTGACGACGGCGTGGTTGCAGTTATGTTTCCAGTGATGGTTGTCGAACCGCTTGCCAAAGTCTGGCCGCGGTGCCTTGGCATGGG TCAGCTGGCGCAGCTTCTCCATGTCGCCCTTCATAACGGCGTTCCACACCTCGTTCGCCTTCATCGTAACCTCGCACGCCCGCACGCACACG                                                                                        ]
[-] EMBL CNS08VEG             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           CCGCTTGCCAAAGTCTGGCCGCGGTGCCTTGGCATGGGTTCAG TGGCGCAGCTTCTCCATGTCGCCCTTCATAACGGCGTTCCACACCTCGTTCGCC                                                                                                                         ]




>consensus_9160#0
TTTATTGATCGTGAATGATCATGGGAACTATCCCATTTATGTAATGCCCGTTGTCTACCA
ACAAGCGTTAACACATACACAGCCAAACATACATATACACGGTACCGTGAATTACATGCA
GTGATAATTATTTCATATGCTCTCCCACTTCCCCATGGCGCGTCTCTGCCAAACCCCCGT
TAAAAATTGACAATTTTCCCTCTAAACAAACAGCATTTTCGAGGAATTGTCGCGATATAT
AAGATAAAGTTTCATCTCAGTGGGAAGATCGAGCGACTGGAGCCGCCCATTCATAATCTG
CACCTTGTCCGGCGCCAACCGGTTCATGTTTCTCCACACAACCTCCCGCACGGTGTCCCG
GGCGAACGTTTCAGCGTAAACAGCTCAAACTGGGGCCTGCCCATAATACTGTAGATCGCC
CGCCACGTGCCAAACCGGTACAGCAGCCACTGGTATAGTGGATTCTTCGGTATGGCATCG
TTGATGCGGCGCGCCAAAAATCCATAAGAACAATACTTCAGACATGGAAAAATCATGTCC
ATCTTTGTGCGTACAACTTCGGTGAGTAAATGTTTAACGAGTGCATCCAGCTCGGTGCCG
TTCAGCAGGGCCAGATAATCGATGGCACGCTGATACTGCTCGTACAGCAGCGCGTTAATC
TTGACGTTGTCCAGCGCGTGAATTTCCATCACGACCGCCGGCATAATGTTGCGTACGGTT
TGTTTCAGGGTTTTCAACGATGCGTTGCTAAATGCTACAAAATCTTCCAACAGCTGGCTC
ACCTCGTCGGCGGAACGCTGCTCGTCGCCCTGGATGAAAAATGTTAACAAGCGTACCAAA
TCGGCGGTCAGCAGCGGCACGCAGCAAACCAGCGGCCAGGTATATTCGAGCTCGGCCCGT
TCCGCCGTGACCGGGCCACACTCGCACAGCACCAGCAGCGCCAACAGCCCGTAGTCGGGA
ATCAGTCTTTCGTACAAAGAGCGAACACGTTCCTGCTTTTCCCACTTCAGTTCCGTTTCG
ATGAAATACGGGATCAGGGAGGACTGGGAGCGATAGCTAAGCAGTGCGGGCTTAAGTATG
TCGTTCACATCGTACCGCTGGCGGTACATGTGGTTCGGGTGTTCCAGGTTGTACAGGATT
TTGAAGCACGCGACCTTGTTGCGCGCGGAACAGGGCCCCCGAGCACTAAATATATCGATC
ACGTTAAAATCGGCATCGTCGGCCGCGTTCAGGAACTGCCACTTGGCTTTGGCGATAAAT
AGCAAATAGATTAAAATTTCAATATTGCCCGTGTCGAACGCGGCCGTATGGAGGGCGGTT
TCGTCCGCGTAGTCGTTCAGGTTGACATCGGCACCGTGCGCTATCAGCAGCTCGACCAGA
TCCAGCCGATCGTTCGACACGGCGTAGTGGAGCGGCGTGATGCTCTCCGTGTCCCCCGTG
TTGACCACGCTGCGGTCCAGACGCAACAGGTAGCTCACGATGTCGGCCGACACGGACTGC
TCGCAGGCGCGCGCCAGCGGGGTGAGCCCTTCGTAGCACTGCACGTTGGTGGCGGGATGG
AAGTGGTCCACCACCAGCTTGACGCAGTCCAGATTGCGGCTGACGACGGCGTGGTGCAGT
ATGTTCCAGTGATGGTTGTCGAACCGCTTGCCAAAGTCTGGCCGCGGTGCCTTGGCATGG
GTCAGCTGGCGCAGCTTCTCCATGTCGCCCTTCATAACGGCGTTCCACACCTCGTTCGCC
TTCATCGTAACCTCGCACGCCCGCACGCACACGGGTGCACCACGTTCGATCCACCAACAA
AAGCTTATTGCGTTTTACAAGTCCTAACTTGTTTCAAAATACGTCAACCCGGTCTTTTCG
G

consensusID : consensus_9160#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 627
fasta sequence

                              [CCGACGACCCCGAGCCCACAGTCAAGTCTTTGGGATCTGGACTTCAACAACGACCGCGTGCAGAATGGATTTTGTGTTCAGGGTGTTCTTTTTGCAGTTCGTGCTATTCGGATTGCTGGTGTCAGGTGTACGACCGCAAACCGGAGGAACCGACTGCCACGGCAAGGACTACCTGTGTCTGGACGATGTCCGATTTCAACTTTGTGTAGACTATGGTGACGGGAAACCGACGACCGTTAACGATGAGGTGCAGCTCTGCCCGGCCGGGACGTTCTGCAGCAACAGTGGACAGTTTGAGTGCGACTCGTTCGTAGCACTGTCGACCACTGCTGAGCCGCACGTTAATGTGGAAGTGGAAGCTACGGCGCAGCCAGAGTATGAAGAGCTCGTTACAGATGAACCATTGGTAGTAGAAGAGGAGGGCACCTTTGCCGATCCGAACAACTGCGGTCGCTACTTCGTCTGCACGCTCAAGAAGCTGGACAAGTTCAAGAAGAGCAAGTTCAAGTGCGCTGCCGGCGAGCGGTTCGATCCGCTGATGGGCATGTGCGTTCCCGACCTAGATGCGTTGTGCGAGTAGTGCGCAAGCGGATGGCAGCCCCAGTTAAACGCGCGGTGTAGTGGCAA]

[+] EMBL BM602707             [CCGACGACCCCGAGCCCACAGTCAAGTCTTTGGGATCTGGACTTCAACAACGACCGCGTGCAGAATGGATTTTGTGTTCAGGGTGTTCTTTTTGCAGTTCGTGCTATTCGGATTGCTGGTGTCAGGTGTACGACCGCAAACCGGAGGAACCGACTGCCACGGCAAGGACTACCTGTGTCTGGACGATGTCCGATTTCAACTTTGTGTAGACTATGGTGACGGGAAACCGACGACCGTTAACGATGAGGTGCAGCTCTGCCCGGCCGGGACGTTCTGCAGCAACAGTGGACAGTTTGAGTGCGACTCGTTCGTAGCACTGTCGACCACTGCTGAGCCGCACGTTAATGTGGAAGTGGAAGCTACGGCGCAGCCAGAGTATGAAGAGCTCGTTACAGATGAACCATTGGTAGTAGAAGAGGAGGGCACCTTTGCCGATCCGAACAACTGCGGTCGCTACTTCGTCTGCACGCTCAAGAAGCTGGACAAGTTCAAGAAGAGCAAGTTCAAGTGCGCTGCCGGCGAGCGGTTCGATCCGCTGATGGGCATGTGCGTTCCCGACCTAGATGCGTTGTGCGAGTAGTGCGCAAGCGGATGGCAGCCCCAGTTAAACGCGCGGTGTAGTGGCAA]




>consensus_9160#1
CCGACGACCCCGAGCCCACAGTCAAGTCTTTGGGATCTGGACTTCAACAACGACCGCGTG
CAGAATGGATTTTGTGTTCAGGGTGTTCTTTTTGCAGTTCGTGCTATTCGGATTGCTGGT
GTCAGGTGTACGACCGCAAACCGGAGGAACCGACTGCCACGGCAAGGACTACCTGTGTCT
GGACGATGTCCGATTTCAACTTTGTGTAGACTATGGTGACGGGAAACCGACGACCGTTAA
CGATGAGGTGCAGCTCTGCCCGGCCGGGACGTTCTGCAGCAACAGTGGACAGTTTGAGTG
CGACTCGTTCGTAGCACTGTCGACCACTGCTGAGCCGCACGTTAATGTGGAAGTGGAAGC
TACGGCGCAGCCAGAGTATGAAGAGCTCGTTACAGATGAACCATTGGTAGTAGAAGAGGA
GGGCACCTTTGCCGATCCGAACAACTGCGGTCGCTACTTCGTCTGCACGCTCAAGAAGCT
GGACAAGTTCAAGAAGAGCAAGTTCAAGTGCGCTGCCGGCGAGCGGTTCGATCCGCTGAT
GGGCATGTGCGTTCCCGACCTAGATGCGTTGTGCGAGTAGTGCGCAAGCGGATGGCAGCC
CCAGTTAAACGCGCGGTGTAGTGGCAA

consensusID : consensus_9160#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 154
fasta sequence

                              [CCGCCCACGCGTCCGCCCACGCGACCGCCCACGCGTCCGCGACGACCCCGGCCAAGTACGAGGAGCCTGCTAAGGCTTACCACGCCCCGGGCCCGGCCTACCATGCTCCGGCTCACCACGCCCCGGGCCCGGCCTACCACTCACCGGCTCCCCA]

[+] EMBL BM577851             [CCGCCCACGCGTCCGCCCACGCGACCGCCCACGCGTCCGCGACGACCCCGGCCAAGTACGAGGAGCCTGCTAAGGCTTACCACGCCCCGGGCCCGGCCTACCATGCTCCGGCTCACCACGCCCCGGGCCCGGCCTACCACTCACCGGCTCCCCA]




>consensus_9160#2
CCGCCCACGCGTCCGCCCACGCGACCGCCCACGCGTCCGCGACGACCCCGGCCAAGTACG
AGGAGCCTGCTAAGGCTTACCACGCCCCGGGCCCGGCCTACCATGCTCCGGCTCACCACG
CCCCGGGCCCGGCCTACCACTCACCGGCTCCCCA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9160#1      ------------------------------------------------------------
consensus_9160#2      ------------------------------------------------------------
consensus_9160#0      TTTATTGATCGTGAATGATCATGGGAACTATCCCATTTATGTAATGCCCGTTGTCTACCA 60
                                                                                  

consensus_9160#1      ------------------------------------------------------------
consensus_9160#2      ------------------------------------------------------------
consensus_9160#0      ACAAGCGTTAACACATACACAGCCAAACATACATATACACGGTACCGTGAATTACATGCA 120
                                                                                  

consensus_9160#1      ------------------------------------------------------------
consensus_9160#2      ------------------------------------------------------------
consensus_9160#0      GTGATAATTATTTCATATGCTCTCCCACTTCCCCATGGCGCGTCTCTGCCAAACCCCCGT 180
                                                                                  

consensus_9160#1      ------------------------------------------------------------
consensus_9160#2      ------------------------------------------------------------
consensus_9160#0      TAAAAATTGACAATTTTCCCTCTAAACAAACAGCATTTTCGAGGAATTGTCGCGATATAT 240
                                                                                  

consensus_9160#1      ------------------------------------------------------------
consensus_9160#2      ------------------------------------------------------------
consensus_9160#0      AAGATAAAGTTTCATCTCAGTGGGAAGATCGAGCGACTGGAGCCGCCCATTCATAATCTG 300
                                                                                  

consensus_9160#1      ------------------------------------------------------------
consensus_9160#2      ------------------------------------------------------------
consensus_9160#0      CACCTTGTCCGGCGCCAACCGGTTCATGTTTCTCCACACAACCTCCCGCACGGTGTCCCG 360
                                                                                  

consensus_9160#1      ------------------------------------------------------------
consensus_9160#2      ------------------------------------------------------------
consensus_9160#0      GGCGAACGTTTCAGCGTAAACAGCTCAAACTGGGGCCTGCCCATAATACTGTAGATCGCC 420
                                                                                  

consensus_9160#1      ------------------------------------------------------------
consensus_9160#2      ------------------------------------------------------------
consensus_9160#0      CGCCACGTGCCAAACCGGTACAGCAGCCACTGGTATAGTGGATTCTTCGGTATGGCATCG 480
                                                                                  

consensus_9160#1      ------------------------------------------------------------
consensus_9160#2      ------------------------------------------------------------
consensus_9160#0      TTGATGCGGCGCGCCAAAAATCCATAAGAACAATACTTCAGACATGGAAAAATCATGTCC 540
                                                                                  

consensus_9160#1      ------------------------------------------------------------
consensus_9160#2      ------------------------------------------------------------
consensus_9160#0      ATCTTTGTGCGTACAACTTCGGTGAGTAAATGTTTAACGAGTGCATCCAGCTCGGTGCCG 600
                                                                                  

consensus_9160#1      ------------------------------------------------------------
consensus_9160#2      ------------------------------------------------------------
consensus_9160#0      TTCAGCAGGGCCAGATAATCGATGGCACGCTGATACTGCTCGTACAGCAGCGCGTTAATC 660
                                                                                  

consensus_9160#1      ------------------------------------------------------------
consensus_9160#2      ------------------------------------------------------------
consensus_9160#0      TTGACGTTGTCCAGCGCGTGAATTTCCATCACGACCGCCGGCATAATGTTGCGTACGGTT 720
                                                                                  

consensus_9160#1      ------------------------------------------------------------
consensus_9160#2      ------------------------------------------------------------
consensus_9160#0      TGTTTCAGGGTTTTCAACGATGCGTTGCTAAATGCTACAAAATCTTCCAACAGCTGGCTC 780
                                                                                  

consensus_9160#1      ------------------------------------------------------------
consensus_9160#2      ------------------------------------------------------------
consensus_9160#0      ACCTCGTCGGCGGAACGCTGCTCGTCGCCCTGGATGAAAAATGTTAACAAGCGTACCAAA 840
                                                                                  

consensus_9160#1      ------------------------------------------------------------
consensus_9160#2      ------------------------------------------------------------
consensus_9160#0      TCGGCGGTCAGCAGCGGCACGCAGCAAACCAGCGGCCAGGTATATTCGAGCTCGGCCCGT 900
                                                                                  

consensus_9160#1      ------------------------------------------------------------
consensus_9160#2      ------------------------------------------------------------
consensus_9160#0      TCCGCCGTGACCGGGCCACACTCGCACAGCACCAGCAGCGCCAACAGCCCGTAGTCGGGA 960
                                                                                  

consensus_9160#1      -----------------------CCGACGACCCCGAGCCCACAGTCAAGTCTTTGGGATC 37
consensus_9160#2      ------------------------------------------------------------
consensus_9160#0      ATCAGTCTTTCGTACAAAGAGCGAACACGTTCCTGCTTTTCCCACTTCAGTTCCGTTTCG 1020
                                                                                  

consensus_9160#1      TGGACTTCAACAACGACCGCGTGCAGAATGGATTTTGTGTTCAGGGTGTTCTTTTTGCAG 97
consensus_9160#2      ------------------------------------------------------------
consensus_9160#0      ATGAAATACGGGATCAGGGAGGACTGGGAGCGATAGCTAAGCAGTGCGGGCTTAA-GTAT 1079
                                                                                  

consensus_9160#1      TTCGTGCTATTCGGATTGCTGGTGTCAGGTGTACGACCGCAAACCGGAGGAACCGACTGC 157
consensus_9160#2      ------------------------------------------------------------
consensus_9160#0      GTCGTTCACATCGTACCGCTGGCGGTACATGTGGTTCGGGTGTTCCAGGTTGTACAGGAT 1139
                                                                                  

consensus_9160#1      CACGGCAAGGACTACCTGTGTCTGGACGATGTCCGATTTCAACTTTGTGTAGACTATGGT 217
consensus_9160#2      ------------------------------------------------------------
consensus_9160#0      TTTGAAGCACGCGACCTTGTTGCGCGCGGAACAGGGCCCCCGAGCACTAAATATATCGAT 1199
                                                                                  

consensus_9160#1      GACGGGAAACCGACGACCGTTAACGATGAGGTGCAGCT-CTGCCCGGCCGGGACGTTCTG 276
consensus_9160#2      ------------------------------------------------------------
consensus_9160#0      CACGTTAAAATCGGCATCGTCGGCCGCGTTCAGGAACTGCCACTTGGCTTTGGCGATAAA 1259
                                                                                  

consensus_9160#1      CAGCAA-CAGTGGACAGTTTGAGTGCGACTCGTTCGTAGCACTGTCGACCA-----CTGC 330
consensus_9160#2      --------------------------------------------CCGCCCA-----CGCG 11
consensus_9160#0      TAGCAAATAGATTAAAATTTCAATATTGCCCGTGTCGAACGCGGCCGTATGGAGGGCGGT 1319
                                                                   **         *   

consensus_9160#1      TGAGCCGCACGTTAATGTGGAAG----TGGAAGCTACG-GCGCAGCCAG-AGTATGA--A 382
consensus_9160#2      TCCGCC-CACGCGACCGCCCACG----CGTCCGCGACG-ACCCCGGCCA-AGTACGA--G 62
consensus_9160#0      TTCGTC-CGCGTAGTCGTTCAGGTTGACATCGGCACCGTGCGCTATCAGCAGCTCGACCA 1378
                      *  * * * **     *   * *         **  **  * *   *   **   **   

consensus_9160#1      GAGCTCGTTACAGATGAACCATTG-GTAGTAGAAGAGGAGGGCACCTTTGCCGATCCG-- 439
consensus_9160#2      GAGCCTGCTA-AGGCTTACCAC---GCCCCGGGCCCGG------CCTACCATGCTCCG-- 110
consensus_9160#0      GATCCAGCCGATCGTTCGACACGGCGTAGTGGAGCGGCGTGATGCTCTCCGTGTCCCCCG 1438
                      ** *  *            **    *     *    *       *       *  **   

consensus_9160#1      -AACAACTGCGGTCGCTACTTCGTCTGCACGCTCAAGAAGCTGGACAAGTTCAAGAAGAG 498
consensus_9160#2      -GCTCACCACGCCCCGGGCCCGGCCTAC-CACTCACCG-GCTCCCCA------------- 154
consensus_9160#0      TGTTGACCACGCTGCGGTCCAGACGCAA-CAGGTAGCTCACGATGTCGGCCGACACGGAC 1497
                           **  **       *          *    *     *                   

consensus_9160#1      CAAGTTCAAGTGCGCTGCCGGCGAGCGGTTCGATCCGCTGATGGGCATGTGCGTTCCCGA 558
consensus_9160#2      ------------------------------------------------------------
consensus_9160#0      TGCTCGCAGGCGCGC-GCCAGCGGGGTGAGCCCTTCGTAGCACTGCACGTTGGTGGCGGG 1556
                                                                                  

consensus_9160#1      CCTAGATGCGTTGTGCGAGTAGTGCGCAAGCGGATGGCAGCCCCAGTTAAACGCGCGGTG 618
consensus_9160#2      ------------------------------------------------------------
consensus_9160#0      ATGGAAGTGGTCCACCACCAGCTTGACGCAGTCCAGATTGCGGCTGACGACGGCGTGGTG 1616
                                                                                  

consensus_9160#1      TAGTGGCAA--------------------------------------------------- 627
consensus_9160#2      ------------------------------------------------------------
consensus_9160#0      CAGTATGTTCCAGTGATGGTTGTCGAACCGCTTGCCAAAGTCTGGCCGCGGTGCCTTGGC 1676
                                                                                  

consensus_9160#1      ------------------------------------------------------------
consensus_9160#2      ------------------------------------------------------------
consensus_9160#0      ATGGGTCAGCTGGCGCAGCTTCTCCATGTCGCCCTTCATAACGGCGTTCCACACCTCGTT 1736
                                                                                  

consensus_9160#1      ------------------------------------------------------------
consensus_9160#2      ------------------------------------------------------------
consensus_9160#0      CGCCTTCATCGTAACCTCGCACGCCCGCACGCACACGGGTGCACCACGTTCGATCCACCA 1796
                                                                                  

consensus_9160#1      ------------------------------------------------------------
consensus_9160#2      ------------------------------------------------------------
consensus_9160#0      ACAAAAGCTTATTGCGTTTTACAAGTCCTAACTTGTTTCAAAATACGTCAACCCGGTCTT 1856
                                                                                  

consensus_9160#1      -----
consensus_9160#2      -----
consensus_9160#0      TTCGG 1861