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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9165#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 1457 fasta sequence
[ATCAGTCT-TGCTCGTTGTCTGTGCGCCATTGCGTGCCACTGATTTAGTCGATTTAGTTTTAACGCAAATTAGCTGAATTTCTTATAAGTGCGGGAATCGAAGCAACAATGGGCACTGATTGCATGCAGCCGGGCAAACGGGGCCTCACGGTGTCGGTTGTTGTTTTAGGCGGTGCCTGCTTAACGGTAATGCTGGCCTATTTGGCGTTCGGGGACAGCACTGATGAATCCGGCCTGCGTACGCTTCGTATGGTGAGCATCATCTTTCGCCATGGTGATCGTTCGCCCACTGAATTCTATCCAAACGATCCGCATCGAAATCATCACTGGACTGGAGGATT-GGGTGCTCTCTCTGAGAAAGGATCTCAGCAAATGTATCAACTAGGCAAACTGCTGCGCCCACGATACTATCGGCTGCTTCCACCGAACGGGCTGTACTCCAAGGAGCACATGACGATCGTCAGTAGCTACGC-GGAACGATGTATCATGAGCGCTCAAAGCTTTATCGCTGGATTTCTTCCCCCGCTGGAAAATACTAATCCCCTGCCCATTCCATGGCAACCTGCAGCTGTAAATGTATTGCCACGGGATCGTGACACGATTTTAGCTCAAAAGCAACCCTGCCCAAGGTACGAACAATCGAAACAACGTCTTGTAGCCTATCCTCCGAAAGATATAAGAGAATTGTACGAAAAGAATGCTGCGCTGTTTCGCACGCTAAGCCAAGGAACTGGACAAAACGTCAGTACCATACTCGATGTGGAGCTGCTGTACAACACATTGGAGATAGAGAAATCGGCTGGGCTGGAATTGCCGGACTGGAC-GGAAGGTATTTTTCCGCAGAAGATGCTACCCATTGCTGAGCGCA-CTTGGGCACTGATAACCGAACTGCCGCTGATGAAAAAAATCAAGGGCGGTGCGATCGTGGCCGAGTTGCTGGATAATGCCATTCGCCGACGATCGGGAATACTGATACCCGAGCGGAACATTTTCATCTATTCGGGCCACGACGTGACGCTGGTAAACTTCATGCGCGCCTTAAACATCATCGACCAGACGACGGGTAAACCAGACTTTTCGGCAGCGATCGTATTCGAGCTGCACCATAGCATTACGTTTGATGACGATTTTGAGGTGAAAATCGTTTACTTCTTCAACAGTGACGATAAGTACCCGAAGGAGATAGAAATACCCAACTGTGAAAGTCCTTGCTCTTTGACCAAGTTTGAACAGGTGATGGAGACGGTGCGTCTCAGGAACTACGATGAAACTTGTCAGCTAGTTTGAAGGCTTTGTTTGGGTGGTATGTGCCTCCATTTGGCACGATATATTGCCACATACCTCACC-CGTTACACTTTGATATTTGTAAGAGTCTCGTGAATAATGTTAGCTTAAAAGCACACTTTGCCAAATGCCAAAAAGACAATCTCATTGAAAACAAATTAAAAAAAAAAAAAA]
[+] EMBL CNS08NX0 [ATCAGTCTGTGCTCGTTGTCTGTGCGCCATTGCGTGCCACTGATTTAGTCGATTTAGTTTTAACGCAAATTAGCTGAATTTCTTATAAGTGCGGGAATCGGAGCAACAATGGGCACAGATTGCATGCAGCCGGGCAAACGGGGCCTCACGGTGTCGGTTGTTGTTTTAGGCGGTGCCTGCTTAACGGTAATGCTGGCCTATTTGGCGTTCGGGGACAGCACTGATGAATCCGGCCTGCGTAC CTTCGTATGGTGAGCATCATCTTTCGCCATGGTGATCGTTCACCCACTGAATTCTATCCAAACGATCCGCATCGGAATCATCACTGGACTGGAGGATTGGGGTGCTCTCTCTGAGAAAGGATCTCAGCAAATGTATCAACTAGGCAAACTGCTGCGCCCACGATACTATCGGCTGCTTCCACCGAACGGGCTGTACTCCAAGGAGCACATG ]
[+] EMBL CNS08OM3 [ t actggGTTGTCTTTGCGCCATTGCGTGCCACTGATTTAGTCGATTTAGTTTTAACGCAAATTAGCTGAATTTCTTATAAGTGCGGGAATCGAAGCAACAATGGGCACTGATTGCATGCAGCCGGGCAAACGGGGCCTCACGGTGTCGGTTGTTGTTTTAGGCGGTGCCTGCTTAACGGTAATGCTGGCCTATTTGGCGTTCGGGGACAGCACTGATGAATCCGGCCTGCGTACGCTTCGTATGGTGAGCATCATCTTTCGCCATGGTGATCGTTCGCCCACTGAATTCTATCCAAACGATCCGCATCGAAATCATCACTGGACTGGAGGATT GGGTGCTCTCTCTGAGAAAGGATCTCAGCAAATGTATCAACTAGGCAAACTGCTGCGCCCACGATACTATCGGCTGCTTCCACCGAACGGGCTGTACTCCAAGGAGCACATGACGATCGTCAGTAGCTACGC GGAACGATGTATCATGAGCGCTCAAAGCTTTATCGCTGGATTTCTTCCCCCGCTGGAAAATACTAATCCCCTGCCCATTCCATGGCAACCTGCAGCTGTAAATGTATTGCCACGGGATCGTGACACGATTTTAGCTCAAAAGCAACCCTGCCCAAGGTACGAACAATCGAAACAACGTCTTGTAGCCTATCCTCCGAAAGATATAAGAGAATTGTACGAAAAGAATGCTGCGCTGTTTCGCACGCTAAGCCAAGGAACTGGACAAAACGTCAGTACCATACTCGATGTGGAGCTGCTGTACAACACATTGGAGATAGAGAAATCGGCTGGGCTGGAATTGCCGGACTGGAC GGAAGGTATTTTTCCGCAGAAGATGCTACCCATTGCTGAGCGCA CTTGGGCACTGATAACCGAACTGCCGCTGATGAAAAAAATCAAGGGCGGTGCGATCGTGGCCGAGTTGCTGGATAATGCCATTCGCCGACGATCGGGAATACTGATACCCGAGCGGAACATTTTCATCTATTCGGGCCACGACGTGACGCTGGTAAACTTCATGC ]
[+] EMBL CNS08S92 [ TCTGTGCGCCATTGCGTGCCACTGATTTAGTCGATTTAGTTTTAACGCAAATTAGCTGAATTTCTTATAAGTGCGGGAATCGAAGCAACAATGGGCACTGATTGCATGCAGCCGGGCAAACGGGGCCTCACGGTGTCGGTTGTTGTTTTAGGCGGTGCCTGCTTAACGGTAATGCTGGCCTATTTGGCGTTCGGGGACAGCACTGATGAATCCGGCCTGCGTACGCTTCGTATGGTGAGCATCATCTTTCGCCATGGTGATCGTTCGCCCACTGAATTCTATCCAAACGATCCGCATCGAAATCATCACTGGACTGGAGGATT GGGTGCTCTCTCTGAGAAAGGATCTCAGCAAATGTATCAACTAGGCAAACTGCTGCGCCCACGATACTATCGGCTGCTTCCACCGAACGGGCTGTACTCCAAGGAGCACATGACGATCGTCAGTAGCTACGC GGAACGATGTATCATGAGCGCTCAAAGCTTTATCGCTGGATTTCTTCCCCCGCTGGAAAATACTAATCCCCTGCCCATTCCATGGCAACCTGCAGCTGTAAATGTATTGCCACGGGATCGTGACACGATTTTAGCTCAAAAGCAACCCTGCCCAAGGTACGAACAATCGAAACAACGTCTTGTAGCCTATCCTCCGAAAGATATAAGAGAATTGTACGAAAAGAATGCTGCGCTGTTTCGCACGCTAAGCCAAGGAACTGGACAAAACGTCAGTACCATACTCGATGTGGAGCTGCTGTACAACACATTGGAGATAGAGAAATCGGCTGGGCTGGAATTGCCGGACTGGAC GGAAGGTATTTTTCCGCAGAAGATGCTACCCATTGCTGAGCGCA CTTGGGCACTGATAACCGAACTGCCGCTGATGAAAAAAATCAAGGGCGGTGCGATAAAAACCGAGTTGCTGGATAATGCCATTCGCCGACGATCGG ]
[+] EMBL BM580986 [ ccgGTGCGCCATTGCGTGCCACTGATTTAGTCGATTTAGTTTTAACGCAAATTAGCTGAATTTCTTATAAGTGCGGGAATCGGAGCAACAATGGGCACAGATTGCATGCAGCCGGGCAAACGGGGCCTCACGGTGTCGGTTGTTGTTTTAGGCGGTGCCTGCTTAACGGTAATGCTAGCCTATTTGGCGTTCGGGGACAGCACTGATGAATCCGGCCTGCGTACGCTTCGTATGGTGAGCATCATCTTTCGCCATGGTGATCGTTCGCCCACTGAATTCTATCCAAACGATCCGCATCGAAATCATCACTGGACTGGAGGATT GGGTGCTCTCTCTGAGAAAGGATCTCAGCAAATGTATCAACTAGGCAAACTGCTGCGCCCACGATACTATCGGCTGCTTCCACCGAACGGGCTGTACTCCAAGGAGCACATGACGATCGTCAGTAGCTACGC GGAACGATGTATCATGAGCGCTCAAAGCTTTATCGCTGGATTTCTTCCCCCGCTGGAAAATACTAATCCCCTGCCCATTCCATGGCAACCTGCAGCTGTAAATGTATTGCCACGGGATCGTGACACGATTTTAGCTCAAAAGCAACCCTGCCCAAGGTACGAACAATCGAAACAACGTCTTGTAGCCTATCCTCCGAAAGATATAAGAGAATTGTACGAAAAGAATGCTGCGCTG ]
[+] EMBL CNS08RKF [ aaGCGCCATTGCGTGCCACTGATTTAGTCGATTTAGTTTTAACGCAAATTAGCTGAATTTCTTATAAGTGCGGGAATCGAAGCAACAATGGGCACTGATTGCATGCAGCCGGGCAAACGGGGCCTCACGGTGTCGGTTGTTGTTTTAGGCGGTGCCTGCTTAACGGTAATGCTGGCCTATTTGGCGTTCGGGGACAGCACTGATGAATCCGGCCTGCGTACGCTTCGTATGGTGAGCATCATCTTTCGCCATGGTGATCGTTCGCCCACTGAATTCTATCCAAACGATCCGCATCGAAATCATCACTGGACTGGAGGATT GGGTGCTCTCTCTGAGAAAGGATCTCAGCAAATGTATCAACTAGGCAAACTGCTGCGCCCACGATACTATCGGCTGCTTCCACCGAACGGGCTGTACTCCAAGGAGCACATGACGATCGTCAGTAGCTACGCGGGAACGATGTATCATGAGCGCTCAAAGCTTTATCGCTGGATTTCTTCCCCCGCTGGAAAATACTAATCCCCTGCCCATT TATGGCAACCTGCAGCTGTAAATGTATTGCCACGGGATCGTGACACGATTTTAGCTCAAAAGCAACCCTGCCCAAGGTACGAACAATCGAAACAACGTCTTGTAGCCTATCCTCCGAAAGATATAAGAGAATTGTACGAAAAGAATGCTGCGCTGTTTCGCACGCTAAGCCAAGGAACTGGACAAAACGTCAGTACCATACTCGATGTGGAGCTGCTGTACAACACATTGGAGATAGAGAAATCGGCTGGGCTGGAATTGCCGGACTGGAC GGAAGGTATTTTTCCGCAGAAGATGCTACCCATTGCTGAGCGCA CTTGGGCACTGATAACCGAACTGCCGCTGATGAAAAAAATCAAGGGCGGTGCGATCGTGGCCGAGTTGCTGGAT ]
[+] EMBL BX623001 [ CCTCACGGTGTCGGTTGTTGTTTTAGGCGGTGCCTGCTTAACGGTAATGCTGGCCTATTTGGCGTTCGGGGACAGCACTGATGAATCCGGCCTGCGTACGCTTCGTATGGTGAGCATCATCTTTCGCCATGGTGATCGTTCACCCACTGAATTCTATCCAAACGATCCGCATCGGAATCATCACTGGACTGGAGGATT GGGTGCTCTCTCTGAGAAAGGATCTCAGCAAATGTATCAACTAGGCAAACTGCTGCGCCCACGATACTATCGGCTGCTTCCACCGAACGGGCTGTACTCCAAGGAGCACATGACGATCGTGAGTAGCTACGC GGAACGATGTATCATGAGCGCTCAAAGCTTTATCGCTGGATTTCTTCCCCCGCTGGAAAATACTAATCCCCTGCCCATTCCATGGCAACCTGCAGCTGTAAATGTATTGCCACGGGATCGTGACACGATTTTAGCTCAAAAGCAACCCTGCCCAAGGTACGAACAATCAAAACAACGTCTTGTAGCCTATCCTCCGAAAGATATAAGAGAATTGTACGAAAAGAATGCTGCACTGTTTCGCACGCTAAGCCAAGGAACTGGACAAAACATCAGTACCATTCTCGATGTGGAGCTGCTGTACAACACATTGGAGATAGAGAAATCGGCTGGGCTGGAACTGCCGGA ]
[+] EMBL BM628471 [ ccGGACAGCACTGATGAATCCGGCCTGCGTACGCTTCGTATGGTGAGCATCATCTTTCGCCATGGTGATCGTTCGCCCACTGAATTCTATCCAAACGATCCGCATCGAAATCATCACTGGACTGGAGGATT GGGTGCTCTCTCTGAGAAAGGATCTCAGCAAATGTATCAACTAGGCAAACTGCTGCGCCCACGATACTATCGGCTGCTTCCACCGAACGGGCTGTACTCCAAGGAGCACATGACGATCGTCAGTAGCTACGC GGAACGATGTATCATGAGCGCTCAAAGCTTTATCGCTGGATTTCTTCCCCCGCTGGAAAATACTAATCCCCTGCCCATTCCATGGCAACCTGCAGCTGTAAATGTATTGCCACGGGATCGTGACACGATTTTAGCTCAAAAGCAACCCTGCCCAAGGTACGAACAATCGAAACAACGTCTTGTAGCCTATCCTCCGAAAGATATAAGAGAATTGTACGAAAAGAATGCTGCGCTGTTTCGCACGCTAAGCCAAGGAACTGGACAAAACATCAGTACCATTCTCGATGTGGAGCTGCTGTACAACACATTGGAGATAGAGAAATCGGCTGGGCTGGAACTGCCGGACTGGACGGGAAGGTATTTTTCCGCAGAAGATGCTACCTATTGCTGAGCGCAGCTT GGCACTGATAACCGAACTGCCGCTAATGAAAAAAAatc ]
[+] EMBL BX625542 [ GCTACGC GGAACGATGTATCATGAGCGCTCAAAGCTTTATCGCTGGATTTCTTCCCCCGCTGGAAAATACTAATCCCCTGCCCATTCCATGGCAACCTGCAGCTGTAAATGTATTGCCACGGGATCGTGACACGATTTTAGCTCAAAAGCAACCCTGCCCAAGGTACGAACAATCGAAACAACGTCTTGTAGCCTATCCTCCGAAAGATATAAGAGAATTGTACGAAAAGAATGCTGCACTGTTTCGCACGCTAAGCCAAGGAACTGGACAAAACATCAGTACCATTCTCGATGTGGAGCTGCTGTACAACACATTGGAGATAGAGAAATCGGCTGGGCTGGAACTGCCGGACTGGAC GGAAGGTATTTTTCCGCAGAAGATGCTACCTATTGCTGAGCGCAGCTT GGCACTGATAACCGAACTGCCGCTGATGAAAAAAATCAAGGGCGGTGCGATCGTGGCCGAGTTGCTGGATAATGCCATTCGCCGACGATCGGGAATACTGATACCCGAGCGGAACATTTTCATCTATTCGGGCCACGACGTGACGCTGGTAAACTTCATGCGCGCCTTAAACATCATCGACCAGACGACGGGTAAACCAGACTTTTCGGCAGCGATCGTATTCGAGCTGCACCATAGCATTACGTTTGATGACGATTTTGAGGTGAAAATCGTTTACTTCTTCAACAGTGACGATAAGTACCCGAAGGAGATAGAAATACCCAACTGTGAAAGTCCTTGCT ]
[-] EMBL CNS08RKG [ TACCCATTGCTGAGCGCAGCTT GGCACTGATAACCGAACTGCCGCTGAT TTAAAAATCAAGGGCGGTGCGATCGTGGCCGAGTTGCTGGATAATGCCATTCGCCGACGATCGGGAATACTGATACCCGAGCGGAACATTTTCATCTATTCGGGCCACGACGTGACGCTGGTAAACTTCATGCGCGCCTTAAACATCATCGACCAGACGACGGGTAAACCAGACTTTTCGGCAGCGATCGTATTCGAGCTGCACCATAGCATTACGTTTGATGACGATTTTGAGGTGAAAATCGTTTACTTCTTCAACAGTGACGATAAGTACCCGAAGGAGATAGAAATACCCAACTGTGAAAGTCCTTGCTCTTTGACCAAGTTTGAACAGGTGATGGAGACGGTGCGTCTCAGGAACTACGATGAAACTTGTCAGCTAGTTTGAAGGCTTTGTTTGGGTGGTATGTGCCTCCATTTGGCACGATATATTGCCACATACCTCACCGCGTTACACTTTGATATTTGTAAGAGTCTCGTGAATAATGTTAGCTTAAAAGCACACTTTGCCAAATGCCAAAAAGACAATCTCATTGAAAACAAATTAA ]
[-] EMBL CNS08OM4 [ tGGCACTGATAACCGAACTGCCGCTGATGAAAAAAATCAAGGGCGGTGCGATCGTGGCCGAGTTGCTGGATAATGCCATTCGCCGACGATCGGGAATACTGATACCCGAGCGGAACATTTTCATCTATTCGGGCCACGACGTGACGCTGGTAAACTTCATGCGCGCCTTAAACATCATCGACCAGACGACGGGTAAACCAGACTTTTCGGCAGCGATCGTATTCGAGCTGCACCATAGCATTACGTTTGATGACGATTTTGAGGTGAAAATCGTTTACTTCTTCAACAGTGACGATAAGTACCCGAAGGAGATAGAAATACCCAACTGTGAAAGTCCTTGCTCTTTGACCAAGTTTGAACAGGTGATGGAGACGGTGCGTCTCAGGAACTACGATGAAACTTGTCAGCTAGTTTGAAGGCTTTGTTTGGGTGGTATGTGCCTCCATTTGGCACGATATATTGCCACATACCTCACC TGTTACACTTTGATATTTGTAAGAGTCTCGTGAATAATGTTAGCTTAAAAGCACACTTTGCCAAATGCCAAAAAGACAATCTCATTGAAAACAAAAAAAAAAAAAAAAAAA]
consensusID : consensus_9165#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1220 fasta sequence
[AGTCTGTGCTCTGTTGTCTGTGCGCCATTGCGTGCCACTGATTTAGTCGATTTAGTTTTAACGCAAATTAGCTGAATTTCTTATAAGTGCGGGAATCGAAGCAACAATGGGCACTGATTGCATGCAGCCGGGCAAACGGGGCCTCACGGTGTCGGTTGTTGTTTTAGGCGGTGCCTGCTTAACGGTAATGCTGGCCTATTTGGCGTTCGGGGACAGCACTGATGAATCCGGCCTGCGTACGCTTCGTATGGTGAGCATCATCTTTCGCCATGGTGATCGTTCGCCCACTGAATTCTATCCAAACGATCCGCATCGAAATCATCACTGGACTGGAGGATTGGGTGCTCTCTCTGAGAAAGGATCTCAGCAAATGTATCCTCCGAAAGATATAAGAGAATTGTACGAAAAGAATGCTGCGCTGTTTCGCACGCTAAGCCAAGGAACTGGACAAAACGTCAGTACCATACTCGATGTGGAGCTGCTGTACAACACATTGGAGATAGAGAAATCGGCTGGGCTGGAATTGCCGGACTGGACGGAAGGTATTTTTCCGCAGAAGATGCTACCCATTGCTGAGCGCAGCTTGGCACTGATAACCGAACTGCCGCTGATGAAAAAAATCAAGGGCGGTGCGATCGTGGCCGAGTTGCTGGATAATGCCATTCGCCGACGATCGGGAATACTGATACCCGAGCGGAACATTTTCATCTATTCGGGCCACGACGTGACGCTGGTAAACTTCATGCGCGCCTTAAACATCATCGACCAGACGACGGGTAAACCAGACTTTTCGGCAGCGATCGTATTCGAGCTGCACCATAGCATTACGTTTGATGACGATTTTGAGGTGAAAATCGTTTACTTCTTCAACAGTGACGATAAGTACCCGAAGGAGATAGAAATACCCAACTGTGAAAGTCCTTGCTCTTTGACCAAGTTTGAACAGGTGATGGAGACGGTGCGACTCAGGAACTACGATGAAACTTGTCAGCTAGTTTGAAGGCTTTGTTTGGGCGGTATGTGCCTCCGTTCGGCACGATATATTGCCACATACCTCACGCGTTACACTTTGATATTTGTAAGAGTCTCGTGAATAATGTTAGCTTAAAAGCACACTTTGCCAAATGCCAAAAAAGACAATCTCATTGAAAACAAATTCGAACAGTCATCGTTACTTAATTCTTTGTTATTTGTGTATATCGTTATTGAAATAAAAGTGT]
[+] EMBL BX607641 [AGTCTGTGCTCTGTTGTCTGTGCGCCATTGCGTGCCACTGATTTAGTCGATTTAGTTTTAACGCAAATTAGCTGAATTTCTTATAAGTGCGGGAATCGAAGCAACAATGGGCACTGATTGCATGCAGCCGGGCAAACGGGGCCTCACGGTGTCGGTTGTTGTTTTAGGCGGTGCCTGCTTAACGGTAATGCTGGCCTATTTGGCGTTCGGGGACAGCACTGATGAATCCGGCCTGCGTACGCTTCGTATGGTGAGCATCATCTTTCGCCATGGTGATCGTTCGCCCACTGAATTCTATCCAAACGATCCGCATCGAAATCATCACTGGACTGGAGGATTGGGTGCTCTCTCTGAGAAAGGATCTCAGCAAATGTATCCTCCGAAAGATATAAGAGAATTGTACGAAAAGAATGCTGCGCTGTTTCGCACGCTAAGCCAAGGAACTGGACAAAACGTCAGTACCATACTCGATGTGGAGCTGCTGTACAACACATTGGAGATAGAGAAATCGGCTGGGCTGGAATTGCCGGACTGGACGGAAGGTATTTTTCCGCAGAAGATGCTACCCATTGCTGAGCGCAGCTTGGCACTGATAACCGAACTGCCGCTGATGAAAAAAATCAAGGGCGGTGCGATCGTGGCCGAGTTGCTGGATAATGCCATTCGCCGACGATCGGGAATACTGATACCCGAGCGGAACATTTTCATCTATTCGGGCCACGACGTGACGCTGGTAAACTTCATGCGCGCCTTAAACATCATCGACCAGACGACGGGTAAACCAGACTTTTCGGCAGCGATCGTATTCGAGCTGCACCATAGCATTACGTTTGATGACGATTTTGAGGTGAAAATCG ]
[-] EMBL CNS08NX1 [ CCGAGTTGCTGGATAATGCCATTCGCCGACGATCGGGAATACTGATACCCGAGCGGAACATTTTCATCTATTCGGGCCACGACGTGACGCTGGTAAACTTTTTTTGCGCCTTAAACATCATCGACCAGACGACGGGTAAACCAGACTTTTCGGCAGCGATCGTATTCGAGCTGCACCATAGCATTACGTTTGATGACGATTTTGAGGTGAAAATCGTTTACTTCTTCAACAGTGACGATAAGTACCCGAAGGAGATAGAAATACCCAACTGTGAAAGTCCTTGCTCTTTGACCAAGTTTGAACAGGTGATGGAGACGGTGCGACTCAGGAACTACGATGAAACTTGTCAGCTAGTTTGAAGGCTTTGTTTGGGCGGTATGTGCCTCCGTTCGGCACGATATATTGCCACATACCTCACGCGTTACACTTTGATATTTGTAAGAGTCTCGTGAATAATGTTAGCTTAAAAGCACACTTTGCCAAATGCCAAAAAAGACAATCTCATTGAAAACAAATTCGAACAGTCATCGTTACTTAATTCTTTGTTATTTGTGTATATCGTTATTGAAATAAAAGTGT]
consensusID : consensus_9165#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 706 fasta sequence
[TAACGCAAATTAGCTGAATTTCTTATAAGTGCGGGAATCGGAGCAACAATGGGCACAGATTGCATGCAGCCGGGCAAACGGGGCCTCACGGTGTCGGTTGTTGTTTTAGGCGGTGCCTGCTTAACGGTAATGCTGGCCTATTTGGCGTTCGGGGACAGCACTGATGAATCCGGCCTGCGTACGCTTCGTATGGTGAGCATCATCTTTCGCCATGGTGATCGTTCACCCACTGAATTCTATCCAAACGATCCGCATCGGAATCATCACTGGACTGGAGGATTGGGTGCTCTCTCTGAGAAAGGATCTCAGCAAATGTATCAACTAGGCAAACTGCTGCGCCCACGATACTATCGGCTGCTTCCACCGAACGGGCTGTACTCCAAGGAGCACATGACGATCCTGTAAATGTATTGCCACGGGATCGTGACACGATTTTAGCTCAAAAGCAACCCTGCCCAAGGTACGAACAATCAAAACAACGTCTTGTAGCCTATCCTCCGAAAGATATAAGAGAATTGTACGAAAAGAATGCTGCACTGTTTCGCACGCTAAGCCAAGGAACTGGACAAAACATCAGTACCATTCTCGATGTGGAGCTGCTGTACAACACATTGGAGATAGAGAAATCGGCTGGGCTGGAACTGCCGGACTGGACGGAAGGTATTTTTCCGCAGAAGATGCTACCTATTGCTGAGCGCAGCTTGGC]
[+] EMBL BX603588 [TAACGCAAATTAGCTGAATTTCTTATAAGTGCGGGAATCGGAGCAACAATGGGCACAGATTGCATGCAGCCGGGCAAACGGGGCCTCACGGTGTCGGTTGTTGTTTTAGGCGGTGCCTGCTTAACGGTAATGCTGGCCTATTTGGCGTTCGGGGACAGCACTGATGAATCCGGCCTGCGTACGCTTCGTATGGTGAGCATCATCTTTCGCCATGGTGATCGTTCACCCACTGAATTCTATCCAAACGATCCGCATCGGAATCATCACTGGACTGGAGGATTGGGTGCTCTCTCTGAGAAAGGATCTCAGCAAATGTATCAACTAGGCAAACTGCTGCGCCCACGATACTATCGGCTGCTTCCACCGAACGGGCTGTACTCCAAGGAGCACATGACGATCCTGTAAATGTATTGCCACGGGATCGTGACACGATTTTAGCTCAAAAGCAACCCTGCCCAAGGTACGAACAATCAAAACAACGTCTTGTAGCCTATCCTCCGAAAGATATAAGAGAATTGTACGAAAAGAATGCTGCACTGTTTCGCACGCTAAGCCAAGGAACTGGACAAAACATCAGTACCATTCTCGATGTGGAGCTGCTGTACAACACATTGGAGATAGAGAAATCGGCTGGGCTGGAACTGCCGGACTGGACGGAAGGTATTTTTCCGCAGAAGATGCTACCTATTGCTGAGCGCAGCTTGGC]
consensusID : consensus_9165#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 281 fasta sequence
[CGAGGCAACGAATCGGCACGNAGGCGGCACGAGGTTAGGCGGTGCTGCTTAACGGTAATGCTGGCCTATTTGGCGTATCGGGGGACAGCACTGATGAATCCGGCCTGCGTACGCTATCGTATGGTGAGCATCATCTTTCGCCATGGGTGATCGTTCACCCACGTGAATTCTATACCAAACGATCCGCATCGGAATCATCACTGGACTGGAGGGAATTGGGGTGCTCATCTCTGAGAAAGGAGTCTCAGGAAAATGTATCAACTAGGCAAAGCATGGGTGAN]
[+] EMBL BX469862 [CGAGGCAACGAATCGGCACGNAGGCGGCACGAGGTTAGGCGGTGCTGCTTAACGGTAATGCTGGCCTATTTGGCGTATCGGGGGACAGCACTGATGAATCCGGCCTGCGTACGCTATCGTATGGTGAGCATCATCTTTCGCCATGGGTGATCGTTCACCCACGTGAATTCTATACCAAACGATCCGCATCGGAATCATCACTGGACTGGAGGGAATTGGGGTGCTCATCTCTGAGAAAGGAGTCTCAGGAAAATGTATCAACTAGGCAAAGCATGGGTGAN]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9165#2 -----------------------------------------------------------T 1
consensus_9165#3 ------------------------------------------------------------
consensus_9165#0 ATCAGTCTTGCTCGTTGTCTGTGCGCCATTGCGTGCCACTGATTTAGTCGATTTAGTTTT 60
consensus_9165#1 -AGTCTGTGCTCTGTTGTCTGTGCGCCATTGCGTGCCACTGATTTAGTCGATTTAGTTTT 59
consensus_9165#2 AACGCAAATTAGCTGAATTTCTTATAAGTGCGGGAATCGGAGCAACAATGGGCACAGATT 61
consensus_9165#3 ------------------------------------------------------------
consensus_9165#0 AACGCAAATTAGCTGAATTTCTTATAAGTGCGGGAATCGAAGCAACAATGGGCACTGATT 120
consensus_9165#1 AACGCAAATTAGCTGAATTTCTTATAAGTGCGGGAATCGAAGCAACAATGGGCACTGATT 119
consensus_9165#2 GCATGCAGCCGGGCAAACGGGGCCTCACGGTGTCGGTTGTTGTTTTAGGCGGTGCCTGCT 121
consensus_9165#3 ---------CGAGGCAACGAATCGGCACGNAGGCGGC-ACGAGGTTAGGCGGTGC-TGCT 49
consensus_9165#0 GCATGCAGCCGGGCAAACGGGGCCTCACGGTGTCGGTTGTTGTTTTAGGCGGTGCCTGCT 180
consensus_9165#1 GCATGCAGCCGGGCAAACGGGGCCTCACGGTGTCGGTTGTTGTTTTAGGCGGTGCCTGCT 179
** * **** * **** * *** *********** ****
consensus_9165#2 TAACGGTAATGCTGGCCTATTTGGCGTTC--GGGGACAGCACTGATGAATCCGGCCTGCG 179
consensus_9165#3 TAACGGTAATGCTGGCCTATTTGGCGTATCGGGGGACAGCACTGATGAATCCGGCCTGCG 109
consensus_9165#0 TAACGGTAATGCTGGCCTATTTGGCGTTC--GGGGACAGCACTGATGAATCCGGCCTGCG 238
consensus_9165#1 TAACGGTAATGCTGGCCTATTTGGCGTTC--GGGGACAGCACTGATGAATCCGGCCTGCG 237
*************************** *****************************
consensus_9165#2 TACGCT-TCGTATGGTGAGCATCATCTTTCGCCATGG-TGATCGTTCACCCAC-TGAATT 236
consensus_9165#3 TACGCTATCGTATGGTGAGCATCATCTTTCGCCATGGGTGATCGTTCACCCACGTGAATT 169
consensus_9165#0 TACGCT-TCGTATGGTGAGCATCATCTTTCGCCATGG-TGATCGTTCGCCCAC-TGAATT 295
consensus_9165#1 TACGCT-TCGTATGGTGAGCATCATCTTTCGCCATGG-TGATCGTTCGCCCAC-TGAATT 294
****** ****************************** ********* ***** ******
consensus_9165#2 CTAT-CCAAACGATCCGCATCGGAATCATCACTGGACTGGAGGA---TTGGGTGCTC-TC 291
consensus_9165#3 CTATACCAAACGATCCGCATCGGAATCATCACTGGACTGGAGGGAATTGGGGTGCTCATC 229
consensus_9165#0 CTAT-CCAAACGATCCGCATCGAAATCATCACTGGACTGGAGGA---TTGGGTGCTC-TC 350
consensus_9165#1 CTAT-CCAAACGATCCGCATCGAAATCATCACTGGACTGGAGGA---TTGGGTGCTC-TC 349
**** ***************** ******************** * ******** **
consensus_9165#2 TCTGAGAAAGGA-TCTCAGCAAA-TGTATCAACTAGGCAA------ACTGCTGCGCCCAC 343
consensus_9165#3 TCTGAGAAAGGAGTCTCAGGAAAATGTATCAACTAGGCAA------A-----GCATGGGT 278
consensus_9165#0 TCTGAGAAAGGA-TCTCAGCAAA-TGTATCAACTAGGCAA------ACTGCTGCGCCCAC 402
consensus_9165#1 TCTGAGAAAGGA-TCTCAGCAAA-TGTATCCTCCGAAAGATATAAGAGAATTGTACGAAA 407
************ ****** *** ****** * * * *
consensus_9165#2 GATACTATCGGCTGCTTCCACCGAACGGGCTGTACTCCAAGGAGCACATGACGATC---- 399
consensus_9165#3 GAN--------------------------------------------------------- 281
consensus_9165#0 GATACTATCGGCTGCTTCCACCGAACGGGCTGTACTCCAAGGAGCACATGACGATCGTCA 462
consensus_9165#1 AGAATGCTGCGCTGTTTCGCACGCTAAGCCAAGGAACTGGACAAAACGTCAGTACCATAC 467
consensus_9165#2 ------------------------------------------------------------
consensus_9165#3 ------------------------------------------------------------
consensus_9165#0 GTAGCTACGCGGAACGATGTATCATGAGCGCTCAAAGCTTTATCGCTGGATTTCTTCCCC 522
consensus_9165#1 TCGATGTGGAGCTGCTGTACAACACATTGGAGATAGAGAAATCGGCTGGGCTGGAATTGC 527
consensus_9165#2 ---------------------------------------------CTGTAAATGTATTGC 414
consensus_9165#3 ------------------------------------------------------------
consensus_9165#0 CGCTGGAAAATACTAATCCCCTGCCCATTCCATGGCAACCTGCAGCTGTAAATGTATTGC 582
consensus_9165#1 CGGACTGGACGGAAGGTATTTTTCCGCAGAAGATGCTACCCATTGCTGAGCGCAGCTTGG 587
consensus_9165#2 CACGGGATCGTGACACGATTTTAGCTCAAAAGCAACCCTGCCCAAGGTACGAACAATCAA 474
consensus_9165#3 ------------------------------------------------------------
consensus_9165#0 CACGGGATCGTGACACGATTTTAGCTCAAAAGCAACCCTGCCCAAGGTACGAACAATCGA 642
consensus_9165#1 CACTGATAACCGAACTGCCGCTGATGAAAAA--AATCAAGGGCGGTGCGATCGTGGCCGA 645
consensus_9165#2 AACAACGTCTTGTAGCCTATCCTCCGAAAGATATAAGAGAATTGTACGAAAAGAATGCTG 534
consensus_9165#3 ------------------------------------------------------------
consensus_9165#0 AACAACGTCTTGTAGCCTATCCTCCGAAAGATATAAGAGAATTGTACGAAAAGAATGCTG 702
consensus_9165#1 GTTGCTGGATAAT-GCCATTCGCCGACGATCGGGAATACTGATACCCGAGCGGAACATTT 704
consensus_9165#2 CACTGTTTCGCACGCTAAGCCAAGGAACTGGACAAAACATCAGTACCATTCTCGATGTGG 594
consensus_9165#3 ------------------------------------------------------------
consensus_9165#0 CGCTGTTTCGCACGCTAAGCCAAGGAACTGGACAAAACGTCAGTACCATACTCGATGTGG 762
consensus_9165#1 TCATCTATTCGGGCCACGACGTGACGCTGGTAAACTTCATGCGCGCCTTAAACATCATCG 764
consensus_9165#2 AGCTGCTGTACAACACATTGGAGATAGAGAAATCGGCTGGGCTGGAACTGCCGGACTGGA 654
consensus_9165#3 ------------------------------------------------------------
consensus_9165#0 AGCTGCTGTACAACACATTGGAGATAGAGAAATCGGCTGGGCTGGAATTGCCGGACTGGA 822
consensus_9165#1 ACCAGACGACGGGTAAACCAGACTTTTCGGCAGCGATCGTATTCGAGCTGCACCATAGCA 824
consensus_9165#2 CGGAAGGTATTTTTCCGCAGAAGATGCTACCTATTGCTGAGCGCAGCTTGGC-------- 706
consensus_9165#3 ------------------------------------------------------------
consensus_9165#0 CGGAAGGTATTTTTCCGCAGAAGATGCTACCCATTGCTGAGCGCACTTGGGCACTGATAA 882
consensus_9165#1 TTACGTTTGATGACGATTTTGAGGTGAAAATCGTTTACTTCTTCAACAGTGACGATAAGT 884
consensus_9165#2 ------------------------------------------------------------
consensus_9165#3 ------------------------------------------------------------
consensus_9165#0 CCGAACTGCCGCTGATGAAAAAAATCAAGGGCGGTGCGATCGTGGCCGAGTTGCTGGATA 942
consensus_9165#1 ACCCGAAGGAGATAGAAATACCCAACTGTGAAAGTCCTTGCTCTTTGACCAAGTTTGAAC 944
consensus_9165#2 ------------------------------------------------------------
consensus_9165#3 ------------------------------------------------------------
consensus_9165#0 ATGCCATTCGCCGACGATCGGGAATACTGATACCCGAGCGGAACATTTTCATCTATTCGG 1002
consensus_9165#1 AGGTGATGGAGACGGTGCGACTCAGGAACTACGATGAAACTTGTCAGCTAGTTTGAAGGC 1004
consensus_9165#2 ------------------------------------------------------------
consensus_9165#3 ------------------------------------------------------------
consensus_9165#0 GCCACGACGTGACGCTGGTAAACTTCATGCGCGCCTTAAACATCATCGACCAGACGACGG 1062
consensus_9165#1 TTTGTTTGGGCGGTATGTGCCTCCGTTCGGCACGATATATTGCCACATACCTCACGCGTT 1064
consensus_9165#2 ------------------------------------------------------------
consensus_9165#3 ------------------------------------------------------------
consensus_9165#0 GTAAACCAGACTTTTCGGCAGCGATCGTATTCGAGCTGCACCATAGCATTACGTTTGATG 1122
consensus_9165#1 ACACTTTGATATTTGTAAGAGTCTCGTGAATAATGTTAGCTTAAAAGCACACTTTGCCAA 1124
consensus_9165#2 ------------------------------------------------------------
consensus_9165#3 ------------------------------------------------------------
consensus_9165#0 ACGATTTTGAGGTGAAAATCGTTTACTTCTTCAACAGTGACGATAAGTACCCGAAGGAGA 1182
consensus_9165#1 ATGCCAAAAAAGACAATCTCATTGAAAACAAATTCGAACAGTCATCGTTACTTAATTCTT 1184
consensus_9165#2 ------------------------------------------------------------
consensus_9165#3 ------------------------------------------------------------
consensus_9165#0 TAGAAATACCCAACTGTGAAAGTCCTTGCTCTTTGACCAAGTTTGAACAGGTGATGGAGA 1242
consensus_9165#1 TGTTATTTGTGTATATCGTTATTGAAATAAAAGTGT------------------------ 1220
consensus_9165#2 ------------------------------------------------------------
consensus_9165#3 ------------------------------------------------------------
consensus_9165#0 CGGTGCGTCTCAGGAACTACGATGAAACTTGTCAGCTAGTTTGAAGGCTTTGTTTGGGTG 1302
consensus_9165#1 ------------------------------------------------------------
consensus_9165#2 ------------------------------------------------------------
consensus_9165#3 ------------------------------------------------------------
consensus_9165#0 GTATGTGCCTCCATTTGGCACGATATATTGCCACATACCTCACCCGTTACACTTTGATAT 1362
consensus_9165#1 ------------------------------------------------------------
consensus_9165#2 ------------------------------------------------------------
consensus_9165#3 ------------------------------------------------------------
consensus_9165#0 TTGTAAGAGTCTCGTGAATAATGTTAGCTTAAAAGCACACTTTGCCAAATGCCAAAAAGA 1422
consensus_9165#1 ------------------------------------------------------------
consensus_9165#2 -----------------------------------
consensus_9165#3 -----------------------------------
consensus_9165#0 CAATCTCATTGAAAACAAATTAAAAAAAAAAAAAA 1457
consensus_9165#1 -----------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||