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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9168#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 1920 fasta sequence
[GATGTACTGATAGAGCTG-GTGAACGACTCCATCTACGAGTGG-ACATCCGCCTCATGTCGGTCGACCCGGACAGCCCGCTGCACAACGATCTGGTCCTGCTGAAGGAGCGCGAAGGCAAGGACAGCATACTGCTGAACATCATTTTCAAGGAGACGTACCCGTTCGAGCCACCGTTTGTGCGTGTTGTGCATCCAATCATATCCGGTGGTTACGTACTGGTCGGTGGTGCCATCTGCATGGAGCTGCTCACGAAGCAAGGCTGGAGCTCGGCTTACACCGTGGAGGCGGTCATCATGCAAATAGCGGCCACACTAGTCAAGGGCAAGGCGCGAATACAGTTCGGACCCACCAAGGGCCAGTACAGCTTAGCTAGAGCGCACAAAGTTTCAAATCGCTCGTGCAAATCCACGAAAAGAACGGATGGTTTACACCCCCCAAGGAGGATGGTTAAGAGTTGGGAGAGGGGAGGGCAAACGCCGTTCCACGATGCTGTTGCAGCGCTTCGCTTCCGTGCTCTGTTGTTGATGCTGTAGTGTAGTAGTAGTGTCAGCGTCTTATAACAGTGAAACACGACCGAAAGCAACGGCATCGCGCTAGTTCTTCTAACAATAATCGTTCGTTCTTTAAGCTTTTAGGTTCCTAGACTTAAGTGTAGATGCGAGTACGAATGGAGATGGGATGGTTCTGGAGCGATACGGATGAATGCGTCTATCAAAATTGCGTGCGTGCGTGCGTGCGTGCGTGAGCGTGCTTGTGTTATGTTTGTGTGTAGAAAACTTCGGAAAGATCGTATGCGCGAGAATGGGGTAAAAACACTCTCGAAAGCAAAAGGGATCGGTAGAGTGGGCTAGTAACGTATGGGGGAAGTCGGGGGATAGCTGCAGAACTTCAC----ACAGAGAGAGAAACGCTGGAAGAAGCCACTTTAAATAAGCTTAGTAAATAGGAAATGGTGAGATACTGTTTGAGAATTCGTTTCAGAAAGAAGGATTTAGAAAAGGGAGAGAAAGAGAGCGGAGTGTTAGTAGAGCACATTTTCAACCTTTTGTTCGTACACTATCTATACAACCAAACACCATTCAATATTCAGCACCGCCGTACACACAACAATCACAACACACACACCCACACAGCAGTGAAAGA---TCTTCTTATCATAAAGTATATTTTAAACCAGCATCTCCTATAGTAGGGAAGTGAAATGGATAGGAATTCGGGCGGAAGATACCGATCGGCACT--AAAAAAAATGCACATGT-GCATACAGACGGGCATTCTATAACAGTTCTGTTTATTCTTTGTACTGTAATTCCCTACCTGACTCTGCACTGAAGGTGTGAACTACATGCAGAATATTAAAACACATCTT-GAACAGCAAAAAAAAAAAAAAATGTAAAATTGACTTTAGTGCAGCAAAATAGGGGTACAACTAGTTTAATGTCGACCACACGACGACATGTGGTCGAAATACTGATCGGTGATACAACACGCGTTGAGCAGGAATGTGGTATGAATGGAGCTCCATTGAATTGTTGTTCCTTCAATATTTTCATTCATAGCAAACCCGAAGATCGGTAGCAATGGTTCGTCCTTTTCTCTGAATGGACACAAAGGGGCAGGGGAAAAATTCAAAATGATTCAAAGCTTCTCCTCCCACTTCCGCCAACAATCATAAGCTGAGCTGCCGATCACACCAGTATAGACTGAAAGGAGGAAGTGTGCGCTTTGCTGTGTTCTCCGGTGTGGTGGAACGTTACGTTTGCCGTGTACATGTGGAGCTCTTCAACGAATATCTTCCATCTGTTTGCCGTGCGCAATCTCACGATCGATAAAGCGAGTCAAGAGAAGTCTGTCGGCCGGATCAGACAGACCTAAATGCAACGAATTATAGTTTGTTTTACCTGCTTTTCATTCTGATTTCTTTCTGTA]
[+] EMBL CNS0944K [GATGTACTGATAGAGCTG GTGAACGACTCCATCTACGAGTGGAACATCCGCCTCATGTCGGTCGACCCGGACAGCCCGCTGCACAACGATCTGGTCCTGCTGAAGGAGCGCGAAGGCAAGGACAGCATACTGCTGAACATCATTTTCAAGGAGACGTACCCGTTCGAGCCACCGTTTGTGCGTGTTGTGCATCCAATCATATCCGGTGGTTACGTACTGGTCGGTGGTGCCATCTGCGTGGAGCTGCTCACGAAGCAAGGCTGGAGCTCGGCTTACACCGTGGAGGCGGTCATCATGCAAATAGCGGCCACACTAGTCAAGGGCAAGGCGCGAATACAGTTCGGACCCACCAAGGGCCAGTACAGCTTAGCTAGAGCGCACAAAGTTTCAAATCGCTCGTGCAAATCCACGAAAAGAACGGATGGTTTACACCCCCCAAGGAGGATGGTTAAGAGTTGGGAGAGGGGAGGGCAAACGCCGTTCCACGATGCTGTTGCAGCGCTTCGCTTCCGTGCTCTGTTGTTGATGCTGTAGTGTAGTAGTAGTGTCAGCGTCTTATAACAGTGAAACACGACCGAAAGCAACGGCATCGCGCTAGTTCTTCTAACAATAATCGTTCGTTCTTTAAGCTTTTAGGTTCCTAGACTTAAGTGTAGATGCGAGTACGAATGGAGATGGGATGGTTCTGGAGCGATACGGATGAATGCGTCTATCAAAATTGCGTGCGTGCGTGCGTGCGTGCGT AACGTGCTTGTGTTATGTTTGTGTGTAGAAAACTTCGGAAAGATCGTATGCGCGAGAATGGGGTAAAAACACTCTCGAAAGCAAAAGGGATCGGTAGAGTGGGCTAGTAACGTATGGGGGA ]
[+] EMBL CNS09FMP [ CTGTGTGAACGACTCCATCTACGAGTGG AAATCCGCCTCATGTCGGTCGACCCGGACAGCCCGCTGCACAACGATCTGGTCCTGCTGAAGGAGCGCGAAGGCAAGGACAGCATACTGCTGAACATCATTTTCAAGGAGACGTACCCGTTCGAGCCACCGTTTGTGCGTGTTGTGCATCCAATCATATCCGGTGGTTACGTACTGGTCGGTGGTGCCATCTGCATGGAGCTGCTCACGAAGCAAGGCTGGAGCTCGGCTTACACCGTGGAGGCGGTCATCATGCAAATAGCGGCCACACTAGTCAAGGGCAAGGCGCGAATACAGTTCGGACCCACCAAGGGCCAGTACAGCTTAGCTAGAGCGCACAAAGTTTCAAATCGCTCGTGCAAATCCACGAAAAGAACGGATGGTTTACACCCCCCAAGGAGGATGGTTAAGAGTTGGGAGAGGGGAGGGCAAACGCCGTTCCACGATGCTGTTGCAGCGCTTCGCTTCCGTGCTCTGTTGTTGATGCTGTAGTGTAGTAGTAGTGTCAGCGTCTTATAACAGTGAAACACGACCGAAAGCAACGGCATCGCGCTAGTTCTTCTAACAATAATCGTTCGTTCTTTAAGCTTTTAGGTTCCTAGACTTAAGTGTAGATGCGAGTACGAATGGAGATGGGATGGTTCTGGAGCGATACGGATGAATGCGTCTATCAAAATTG ]
[+] EMBL CNS09I1J [ G GTGAACGACTCCATCTACGAGTGG ACATCCGCCTCATGTCGGTCGACCCGGACAGCCCGCTGCACAACGATCTGGTCCTGCTGAAGGAGCGCGAAGGCAAGGACAGCATACTGCTGAACATCATTTTCAAGGAGACGTACCCGTTCGAGCCACCGTTTGTGCGTGTTGTGCATCCAATCATATCCGGTGGTTACGTACTGGTCGGTGGTGCCATCTGCATGGAGCTGCTCACGAAGCAAGGCTGGAGCTCGGCTTACACCGTGGAGGCGGTCATCATGCAAATAGCGGCCACACTAGTCAAGGGCAAGGCGCGAATACAGTTCGGACCCACCAAGGGCCAGTACAGCTTAGCTAGAGCGCACAAAGTTTCAAATCGCTCGTGCAAATCCACGAAAAGAACGGATGGTTTACACCCCCCAAGGAGGATGGTTAAGAGTTGGGAGAGGGGAGGGCAAACGCCGTTCCACGATGCTGTTGCAGCGCTTCGCTTCCGTGCTCTGTTGTTGATGCTGTAGTGTAGTAGTAGTGTCAGCGTCTTATAACAGTGAAACACGACCGAAAGCAACGGCATCGCGCTAGTTCTTCTAACAATAATCGTTCGTTCTTTAAGCTTTTAGGTTCCTAGACTTAAGTGTAGATGCGAGTACGAATGGAGATGGGATGGTTCTGGAGCGATACGGATGAATGCGTCTATCAAAATTGCGTGCGTGCGTGCGTGCGTGCGTTA CGTGCTTGTGTTATGTTTGTGTGTAGAAAACTTCGGAAAGATCGTATGCGCGAGAATGGGGTAAAAACACTCTCGAAAGCAAAAGGGATCGGTAGAGTGGGCTAGTAACGTATGGGGGAAGTCGGGGGATAGCTGCAGAACTTCAC ACAGAGAGAGAAACGCTGGAAGAAGCCACTTTAAATAAGCTTAGTAAATAGGAAATGGTGAGATACTGTTTGAGAATTCGTTTCAGAAA ]
[+] EMBL BM615601 [ ccgGGATGGTTTACACCCCCCAAGGAGGATGGTTAAGAGTTGGGAGAGGGGAGGGCAAACGCCGTTCCACGATGCTGTTGCAGCGC ]
[-] EMBL CNS09I1K [ TTCCGTGCTCTGTTGTTGATGCTGTAGTGTAGTAGTAGTGTCAGCGTCTTATAACAGTGAAACACGACCGAAAGCAACGGCATCGCGCTAGTTCTTCTAACAATAATCGTTCGTTCTTTAAGCTTTTAGGTTCCTAGACTTAAGTGTAGATGCGAGTACGAATGGAGATGGGATGGTTCTGGAGCGATACGGATGAATGCGTCTATCAAAATTGCGTGCGTGCGTGCGTGCGTGCGTGAGCGTGCTTGTGTTATGTTTGTGTGTAGAAAACTTCGGAAAGATCGTATGCGCGAGAATGGGGTAAAAAAACTCTCGAAAGCAAAAGGGATCGGTAGAGTGGGCTAGTAACGTATGGGGGAAGTCGGGGGATAGCTGCAGAACTTCAC ACAGAGAGAGAAACGCTGGAAGAAGCCACTTTAAATAAGCTTAGTAAATAGGAAATGGTGAGATACTGTTTGAGAATTCGTTTCAGAAAGAAGGATTTAGAAAAGGGAGAGAAAGAGAGCGGAGTGTTAGTAGAGCACATTTTCAACCTTTTGTTCGTACACTATCTATACAACCAAACACCATTCAATATTCAGCACCGCCGTACACACAACAATCACAACACACACACCCACACAGCAGTGAAAGA TCTTCTTATCATAAAGTATATTTTAAACCAGCATCTCCTATAGTAGGGAAGTGAAATGGATAGGAATTCGGGCGGAAGATACCGATCGGCACT AAAAAAAATGCACATGT GCATACAGACGGGCATTCTATAACAGTTCTGTTTATTCTTTGTACTGTAATTCCCTACCTGACTCTGCACTGAAGGTGTGAACTACATGCAGAATATTAAAACACATCTT ]
[-] EMBL CNS0944L [ CAGTGAAACACGACCGAAAGCAACGGCATCGCGCTAGTTCTTCTAACAATAATCGTTCGTTCTTTAAGCTTTTAGGTTCCTAGACTTAAGTGTAGATGCGAGTACGAATGGAGATGGGATGGTTCTGGAGCGATACGGATGAATGCGTCTATCAAAATTGCGTGCGTGCGTGCGTGCGTGCGTGAGCGTGCTTGTGTTATGTTTGTGTGTAGAAAACTTCGGAAAGATCGTATGCGCGAGAATGGGGTAAAAACACTCTCGAAAGCAAAAGGGATCGGTAGAGTGGGCTAGTAACGTATGGGGGAAGTCGGGGGATAGCTGCAGAACTTCAC ACAGAGAGAGAAACGCTGGAAGAAGCCACTTTAAATAAGCTTAGTAAATAGGAAATGGTGAGATACTGTTTGAGAATTCGTTTCAGAAAGAAGGATTTAGAAAAGGGAGAGAAAGAGAGCGGAGTGTTAGTAGAGCACATTTTCAACCTTTTGTTCGTACACTATCTATACAACCAAACACCATTCAATATTCAGCACCGCCGTACACACAACAATCACAACACACACACCCACACAGCAGTGAAAGA TCTTCTTATCATAAAGTATATTTTAAACCAGCATCTCCTATAGTAGGGAAGTGAAATGGATAGGAATTCGGGCGGAAGATACCGATCGGCACT AAAAAAAATGCACATGT GCATACAGACGGGCATTCTATAACAGTTCTGTTTATTCTTTGTACTGTAATTCCCTACCTGACTCTGCACTGAAGGTGTGAACTACATGCAGAATATTAAAACACATCTT GAACAGCAAAAAA ]
[+] EMBL BM592482 [ ccgGAAACACGACCGAAAGCAACGGCATCGCGCTAGTTCTTCTAACAATAATCGTTCGTTCTTTAAGCTTTTAGGTTCCTAGACTTAAGTGTAGATGCGAGTACGAATGGAGATGGGATGGTTCTGGAGCGATACGGATGAATGCGTCTATCAAAAT TGCGTGCGTGCGTGCGTGCGTGAGCGTGCTTGTGTTATGTTTGTGTGTAGAAAACTTCGGAAAGATCGAATGCGCGTGAATGGGGTAAAAACACTCTCGAAAGCAAAAGGGATCGGTAGAGTGGGCTAGTAACGTATGGGGGAAGTCGGGGGATAGCTGCAGAACTTCACAGAGAGAGAGAGAGAAACGCTGGAAGAAGCCACTTTAAATAAGCTTAGTAAAT ]
[-] EMBL CNS09FMQ [ GTGCGTGCGTGCGTGCGTGCGTGAGCGTGCTTGTGTTATGTTTGTGTGTAGAAAACTTCGGAAAGATCGTATGCGCGAGAATGGGGTAAAAACACTCTCGAAAGCAAAAGGGATCGGTAGAGTGGGCTAGTAACGTATGGGGGAAGTCGGGGGATAGCTGCAGAACTTCAC ACAGAGAGAGAAACGCTGGAAGAAGCCACTTTAAATAAGCTTAGTAAATAGGAAATGGTGAGATACTGTTTGAGAATTCGTTTCAGAAAGAAGGATTTAGAAAAGGGAGAGAAAGAGAGCGGAGTGTTGGTAGAGCACATTTTCAACCTTTTGTTCGTACACTATCTATACAACCAAACACCATTCAATATTCAGCACCGCCGTACACACAACAATCACAACACACACACCCACACAGCAGTGAAAGA TCTTCTTATCATAAAGTATATTTTAAACCAGCATCTCCTATAGTAGGGAAGTGAAATGGATAGGAATTCGGGCGGAAGATACCGATCGGCACT AAAAAAAATGCACATGT GCATACAGACGGGCATTCTATAACAGTTCTGTTTATTCTTTGTACTGTAATTCCCTACCTGACTCTGCACTGAAGGTGTGAACTACATGCAGAATATTAAAACACATCTT GGAAACCCAAAAAAAAAAAAAA ]
[+] EMBL BM590459 [ ccgGTGCGTGCGTGAGCGTGCTTGTGTTATGTTTGTGTGTAGAAAACTTCGGAAAGATCGTATGCGCGTGAATGGGGTAAAAACACTCTCGAAAGCAAAAGGGATCGGTAGAGTGGGCTAGTAACGTATGGGGGAAGTCGGGGGATAGCTGCAGAACTTCAC ACAGAGAGAGAAACGCTTGAAGAAGCCACTTTAAATAAGCTTAGTAAATAGGAAATGGTGAGATACTGTTTGAGAATTCGTTTCAGAAAGAAGGATTTAGAAAAGGGAGAGAAAGA GAGTGTTAGTAGAGCACATTTTCAACCTTTTGTTCATATACTATCTACACAACCAAACACCATTCAATATTCAGCACCGCCGTACACACAACAATCACAACACACA CACACAGCAGTGAAAGATCTTCTTCTTATCATAAAGTATATTTTAAACCAGCATCTCCTATAGTAGGGAAGTGAAATGGATAGGAATTCGGGCGGAAGATACCGATCGGCACTAAAAAAAAAATGCGCATGTGGCATACAGACGGGCATTCTATAACAGTTCTGTTTATTCTTTGTACTGTAATTCCCTACCTGACTCTGCACTGAAGGTGTGAACTACGTACAGAAT ]
[+] EMBL BX612286 [ tcATAACACTTATGTTTATTCTTTGTACTGTAATTCCCTACCTGACTCTGCACTGAAGGTGTGAACTACGTGCAGAATATTAAAACACATCTTGGAACCGTACTAGAAGCTCATGTTGTAAAATTGACTTTAGTGCAGCAAAATAGGGGTACAACTAGTTTAATGTCGACCACACGACGACATGTGGTCGAAATACTGATCGGTGATACAACACGCGTTGAGCAGGAATGTGGTATGAATGGAGCTCCATTGAATTGTTGTTCCTTCAATATTTTCATTCATAGCAAACCCGAAGATCGGTAGCAATGGTTCGTCCTTTTCTCTGAATGGACACAAAGGGGCAGGGGAAAAATTCAAAATGATTCAAAGCTTCTCCTCCCACTTCCGCCAACAATCATAAGCTGAGCTGCCGATCACACCAGTATAGACTGAAAGGAGGAAGTGTGCGCTTTGCTGTGTTCTCCGGTGTGGTGGAACGTTACGTTTGCCGTGTACATGTGGAGCTCTTCAACGAATATCTTCCATCTGTTTGCCGTGCGCAATCTCACGATCGATAAAGCGAGTCAAGAGAAGTCTGTCGGCCGGATCAGACAGACCTAAATGCAACGAATTATAGTTTGTTTTACCTGCTTTTCATTCTGATTTCTTTCTGTA]
consensusID : consensus_9168#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 665 fasta sequence
[CCGGCTCGGCTTACACCGTGGAGGCGGTCATCATGCAAATAGCGGCCACACTAGTCAAGGGCAAGGCGCGAATACAGTTCGGACCCACCAAGGGCCAGTACAGCTTAGCTAGAGCGCAGCAAAGTTTCAAATCGCTCGTGCAAATCCACGAAAAGAACGGATGGTTTACACCCCCCAAGGAGGATGGTTAAGAGTTGGGAAGAGGGGAGGGCAAACGCCGTTCCACGATGCTGTTGCAGCGCTTCGCTTCCGTGCTCTGTTGTTGATGCTGTCTGGACGCTACACTGTAGCAAAGATCTTCATCGTACATCACCAGAGATCATCCATTCCCCAAACTCTCTCGCTCTCTCTCTCGTTCTTTGTCTTTGTTTGTGCCATCCGACGAATCGATCTCGCTACGATTACAGCGCATTCGATTATGGATTAAATACAAACGATGGCAGCGAGTTTAGAGATACATGCGAGCGTTTTCTTGTTGGAATGAATGCGAATGGTGATAGAGACCGGGAAATCGATCGAGGAACATAACAACAACCAAAAGGGTATTAGTGTGTGTGTCCCGGTCTTTTCCACTAGCAGCAGTAGTAGTGTCAGCGTCTTATAACAGTGAAACACGACCGAAAGCAACGGCATCGCGCTAGTTCTTCTAACAATAATCGTTCGTT]
[+] EMBL BM653685 [CCGGCTCGGCTTACACCGTGGAGGCGGTCATCATGCAAATAGCGGCCACACTAGTCAAGGGCAAGGCGCGAATACAGTTCGGACCCACCAAGGGCCAGTACAGCTTAGCTAGAGCGCAGCAAAGTTTCAAATCGCTCGTGCAAATCCACGAAAAGAACGGATGGTTTACACCCCCCAAGGAGGATGGTTAAGAGTTGGGAAGAGGGGAGGGCAAACGCCGTTCCACGATGCTGTTGCAGCGCTTCGCTTCCGTGCTCTGTTGTTGATGCTGTCTGGACGCTACACTGTAGCAAAGATCTTCATCGTACATCACCAGAGATCATCCATTCCCCAAACTCTCTCGCTCTCTCTCTCGTTCTTTGTCTTTGTTTGTGCCATCCGACGAATCGATCTCGCTACGATTACAGCGCATTCGATTATGGATTAAATACAAACGATGGCAGCGAGTTTAGAGATACATGCGAGCGTTTTCTTGTTGGAATGAATGCGAATGGTGATAGAGACCGGGAAATCGATCGAGGAACATAACAACAACCAAAAGGGTATTAGTGTGTGTGTCCCGGTCTTTTCCACTAGCAGCAGTAGTAGTGTCAGCGTCTTATAACAGTGAAACACGACCGAAAGCAACGGCATCGCGCTAGTTCTTCTAACAATAATCGTTCGTT]
consensusID : consensus_9168#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 565 fasta sequence
[CAGAGCAGAATCGCACGAGGTGCGCACAATCATAAGCTGAGCTGCCGATCACACCAAGTATAGACTGAAAGGAGGAAGTGTGCGCTTTGCTGTGTTCTCCGGTGTGGTGGAACGTTACGTTTGCCGTGTACATGTGGAGCTCTTCAACGAATATCTTCCATCTGTTTGCCGTGCGCAATCTCACGATCGATAAAGCGAGTCAAGAGAAGTCTGTCGGCCGGATCAGACAGACCTAAATGCAACGAATTATAGTTTGTTTTACCTGGCTTTTCATTCTGTTTGCTTTCTGTAGACGAGCATATGAGAATGGAAACTAAAACACGAGCGCGCTCAACATCATCTGTCGATTCGTTAAATGGAAATACACAATTTGAATGGGATTCAATACGGTGTATGCTATGGTTTGTTAGTTTTTTCGCTCAAAACCCGAACCGAACAATGAAACACAAACACACTCACANAGCTCAACGTTNTAGAAACTCAAAATAGCNAGTCAAAGCAAAGTGCACTCTAGGAGAATAGCGATGATGCATGGCTCTGCATGCGTGCGTGCGTGCGTGCGTGC]
[+] EMBL BX469766 [CAGAGCAGAATCGCACGAGGTGCGCACAATCATAAGCTGAGCTGCCGATCACACCAAGTATAGACTGAAAGGAGGAAGTGTGCGCTTTGCTGTGTTCTCCGGTGTGGTGGAACGTTACGTTTGCCGTGTACATGTGGAGCTCTTCAACGAATATCTTCCATCTGTTTGCCGTGCGCAATCTCACGATCGATAAAGCGAGTCAAGAGAAGTCTGTCGGCCGGATCAGACAGACCTAAATGCAACGAATTATAGTTTGTTTTACCTGGCTTTTCATTCTGTTTGCTTTCTGTAGACGAGCATATGAGAATGGAAACTAAAACACGAGCGCGCTCAACATCATCTGTCGATTCGTTAAATGGAAATACACAATTTGAATGGGATTCAATACGGTGTATGCTATGGTTTGTTAGTTTTTTCGCTCAAAACCCGAACCGAACAATGAAACACAAACACACTCACANAGCTCAACGTTNTAGAAACTCAAAATAGCNAGTCAAAGCAAAGTGCACTCTAGGAGAATAGCGATGATGCATGGCTCTGCATGCGTGCGTGCGTGCGTGCGTGC]
consensusID : consensus_9168#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 378 fasta sequence
[TAGAAAAGGGAGAGAAAGAGAGTGTTAGNATGAGCACATTTTCNACCTTTTGTTCATATACTATCTACACAACCAAACACCATTCAATATTCAGCACCGCCGTACACACAACAATCACAACACACACACACAGCANGGAAAGATCTTCTTCTTATCATAANGTATATTTTAAACCANCATCTCCTATANTAGGGAAGTGAAATGGATAGGAATTCGGGCGGAAGATACCGATCGGCACTAAAAAAAAAATGCGCATGTGGCATACAGACGGGCATTCTATAACNGNTCTGTTTATTCTTTGTACTGTNATTCCCTACCTGACTCTGCACTGAAGGNGTGAACTACGTACAGAATATTANAACACATCTTGGAACCGCA]
[+] EMBL BX624939 [TAGAAAAGGGAGAGAAAGAGAGTGTTAGNATGAGCACATTTTCNACCTTTTGTTCATATACTATCTACACAACCAAACACCATTCAATATTCAGCACCGCCGTACACACAACAATCACAACACACACACACAGCANGGAAAGATCTTCTTCTTATCATAANGTATATTTTAAACCANCATCTCCTATANTAGGGAAGTGAAATGGATAGGAATTCGGGCGGAAGATACCGATCGGCACTAAAAAAAAAATGCGCATGTGGCATACAGACGGGCATTCTATAACNGNTCTGTTTATTCTTTGTACTGTNATTCCCTACCTGACTCTGCACTGAAGGNGTGAACTACGTACAGAATATTANAACACATCTTGGAACCGCA]
[+] EMBL BX603756 [ TACACACAACAATCACAACACACACACACAGCAGTGAAAGATCTTCTTCTTATCCTAAAGTATATTTTAAACCAGCATCTCCTATAGTAGGGAAGTGAAATGGATAGGAATTCGGGCGGAAGATACCGATCGGCACTAAAAAAAAAATGCGCATGTGGCATACAGACGGGCATTCTATA ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9168#0 GATGTACTGATAGAGCTGGTGAACGACTCCATCTACGAGTGGACATCCGCCTCATGTCGG 60
consensus_9168#3 ------------------------------------------------------------
consensus_9168#2 ------------------------------------------------------------
consensus_9168#1 ------------------------------------------------------------
consensus_9168#0 TCGACCCGGACAGCCCGCTGCACAACGATCTGGTCCTGCTGAAGGAGCGCGAAGGCAAGG 120
consensus_9168#3 ------------------------------------------------------------
consensus_9168#2 ------------------------------------------------------------
consensus_9168#1 ------------------------------------------------------------
consensus_9168#0 ACAGCATACTGCTGAACATCATTTTCAAGGAGACGTACCCGTTCGAGCCACCGTTTGTGC 180
consensus_9168#3 ------------------------------------------------------------
consensus_9168#2 ------------------------------------------------------------
consensus_9168#1 ------------------------------------------------------------
consensus_9168#0 GTGTTGTGCATCCAATCATATCCGGTGGTTACGTACTGGTCGGTGGTGCCATCTGCATGG 240
consensus_9168#3 ------------------------------------------------------------
consensus_9168#2 ------------------------------------------------------------
consensus_9168#1 ------------------------------------------------------------
consensus_9168#0 AGCTGCTCACGAAGCAAGGCTGGAGCTCGGCTTACACCGTGGAGGCGGTCATCATGCAAA 300
consensus_9168#3 ------------------------------------------------------------
consensus_9168#2 ------------------------------------------------------------
consensus_9168#1 ------------------------------------------------------------
consensus_9168#0 TAGCGGCCACACTAGTCAAGGGCAAGGCGCGAATACAGTTCGGACCCACCAAGGGCCAGT 360
consensus_9168#3 ------------------------------------------------------------
consensus_9168#2 ------------------------------------------------------------
consensus_9168#1 ------------------------------------------------------------
consensus_9168#0 ACAGCTTAGCTAGAGCGCACAAAGTTTCAAATCGCTCGTGCAAATCCACGAAAAGAACGG 420
consensus_9168#3 ------------------------------------------------------------
consensus_9168#2 ------------------------------------------------------------
consensus_9168#1 ------------------------------------------------------------
consensus_9168#0 ATGGTTTACACCCCCCAAGGAGGATGGTTAAGAGTTGGGAGAGGGGAGGGCAAACGCCGT 480
consensus_9168#3 ------------------------------------------------------------
consensus_9168#2 ------------------------------------------------------------
consensus_9168#1 ------------------------------------------------------------
consensus_9168#0 TCCACGATGCTGTTGCAGCGCTTCGCTTCCGTGCTCTGTTGTTGATGCTGTAGTGTAGTA 540
consensus_9168#3 ------------------------------------------------------------
consensus_9168#2 ------------------------------------------------------------
consensus_9168#1 ------------------------------------------------------------
consensus_9168#0 GTAGTGTCAGCGTCTTATAACAGTGAAACACGACCGAAAGCAACGGCATCGCGCTAGTTC 600
consensus_9168#3 ------------------------------------------------------------
consensus_9168#2 ------------------------------------------------------------
consensus_9168#1 ------------------------------------------------------------
consensus_9168#0 TTCTAACAATAATCGTTCGTTCTTTAAGCTTTTAGGTTCCTAGACTTAAGTGTAGATGCG 660
consensus_9168#3 ------------------------------------------------------------
consensus_9168#2 ------------------------------------------------------------
consensus_9168#1 ------------------------------------------------------------
consensus_9168#0 AGTACGAATGGAGATGGGATGGTTCTGGAGCGATACGGATGAATGCGTCTATCAAAATTG 720
consensus_9168#3 ------------------------------------------------------------
consensus_9168#2 ------------------------------------------------------------
consensus_9168#1 ------------------------------------------------------------
consensus_9168#0 CGTGCGTGCGTGCGTGCGTGCGTGAGCGTGCTTGTGTTATGTTTGTGTGTAGAAAACTTC 780
consensus_9168#3 ------------------------------------------------------------
consensus_9168#2 ------------------------------------------------------------
consensus_9168#1 ------------------------------------------------------------
consensus_9168#0 GGAAAGATCGTATGCGCGAGAATGGGGTAAAAACACTCTCGAAAGCAAAAGGGATCGGTA 840
consensus_9168#3 ------------------------------------------------------------
consensus_9168#2 ------------------------------------------------------------
consensus_9168#1 ------------------------------------------------------------
consensus_9168#0 GAGTGGGCTAGTAACGTATGGGGGAAGTCGGGGGATAGCTGCAGAACTTCACACAGAGAG 900
consensus_9168#3 ------------------------------------------------------------
consensus_9168#2 ------------------------------------------------------------
consensus_9168#1 ------------------------------------------------------------
consensus_9168#0 AGAAACGCTGGAAGAAGCCACTTTAAATAAGCTTAGTAAATAGGAAATGGTGAGATACTG 960
consensus_9168#3 ------------------------------------------------------------
consensus_9168#2 -----------------------------CAGAGCAGAATCGCACGAGGTGCGCACAATC 31
consensus_9168#1 ----------------CCGGCTCGGCTTACACCGTGGAGGCGGTCATCATGCAAATAGCG 44
consensus_9168#0 TTTGAGAATTCGTTTCAGAAAGA-AGGATTTAGAAAAGGGAGAGAAAGAGAGCGGAGTGT 1019
consensus_9168#3 ------------------------------TAGAAAAGGGAGAGAAAGAGAG-----TGT 25
consensus_9168#2 ATAAGCTGAGCTGCCGATCACAC-CAAGTATAGACTGAAAGGAGGAAGTGTGCGCTTTGC 90
consensus_9168#1 GCCACACTAGTCAAGGGCAAGGCGCGAATACAGTTCGGACCCACCAAGGGCCAGTACAGC 104
** * *** * *
consensus_9168#0 TA---------GTA-GAGCACATTTTCAACCTTTTGTTCGTACACTATCTATACAACCAA 1069
consensus_9168#3 TA---------GNATGAGCACATTTTCNACCTTTTGTTCATATACTATCTACACAACCAA 76
consensus_9168#2 TGTGTTCTCCGGTGTGGTGGAACGTTACGTTTGCCGTGTACATGTGGAGCTCTTCAACGA 150
consensus_9168#1 TTAG--CTAGAGCGCAGCAAAGTTTCAAATCGCTCGTGCAAATCC--ACGAAAAGAACGG 160
* * * ** * * *
consensus_9168#0 ACACCATTCAA-TATTCA----GCACCGCCGTACACACAACAAT---CACAACACACACA 1121
consensus_9168#3 ACACCATTCAA-TATTCA----GCACCGCCGTACACACAACAAT---CACAACACACACA 128
consensus_9168#2 ATATCTTCCATCTGTTTGCCGTGCGCAATCTCACGATCGATAAAG--CGAGTCAAGAGAA 208
consensus_9168#1 ATGGTTTACAC-CCCCCAAGGAGGATGGTTAAGAGTTGGGAAGAGGGGAGGGCAAACGCC 219
* * ** * * **
consensus_9168#0 CCCACACAGCAGTGAAAGATCTTCTT----ATCATAAAGTATATTTTAAACCAGC--ATC 1175
consensus_9168#3 ----CACAGCANGGAAAGATCTTCTTCT-TATCATAANGTATATTTTAAACCANC--ATC 181
consensus_9168#2 GTCTGTCGGCCGGATCAGACAGACCTAAATGCAACGAATTATAGTTTGTTTTACCTGGCT 268
consensus_9168#1 GTTCCACGATGCTGTTGCAGCG-CTTCGCTTCCGTGCTCTGTTGTTGATGCTGTCT-GGA 277
* * * * * * ** *
consensus_9168#0 TCCTATAGTAGGGAAGTGAAATGGATAGGAATTCGGG--CGGAAGATACCGATCG---GC 1230
consensus_9168#3 TCCTATANTAGGGAAGTGAAATGGATAGGAATTCGGG--CGGAAGATACCGATCG---GC 236
consensus_9168#2 TTTCATTCTGTTTGCTTTCTGTAGACGAGCATATGAGAATGGAAACTAAAACACGAGCGC 328
consensus_9168#1 CGCTACACTGTAGCAAAGATCTTCATC-GTACATCACCAGAGATCATCCATTCCCCAAAC 336
* * * * * * ** * * *
consensus_9168#0 ACTAAAAAAAA--TGCACATGTG-CATACAGACGGGCATTCTATAA--------CAGTTC 1279
consensus_9168#3 ACTAAAAAAAAAATGCGCATGTGGCATACAGACGGGCATTCTATAA--------CNGNTC 288
consensus_9168#2 GCTCAACATCATCTGTCGATTCGTTAAATGGAAATACACAATTTGAATGGGATTCAATAC 388
consensus_9168#1 TCTCTCGCTCTCTCTCTCGTTCTTTGTCTTTGTTTGTGCCATCCGAC---GAATCGATCT 393
** * * * *
consensus_9168#0 TGTTTATTCTTTGTACTGTAATTCCCTAC---CTGACTCTGCACTGAAGGTGTGAACT-A 1335
consensus_9168#3 TGTTTATTCTTTGTACTGTNATTCCCTAC---CTGACTCTGCACTGAAGGNGTGAACT-A 344
consensus_9168#2 GGTGTATGCTATGGTTTGTTAGTTTTTTCGCTCAAAACCCGAACCGAACAA-TGAAAC-A 446
consensus_9168#1 CGCTACGATTACAGCGCATTCGATTATGGA--TTAAATACAAACGATGGCAGCGAGTTTA 451
* * * * * ** ** *
consensus_9168#0 CATGCAGAATATTAAAAC---ACATCTTG-AACAGCAAAAAAAAAAAAAAATGTAA-AAT 1390
consensus_9168#3 CGTACAGAATATTANAAC---ACATCTTGGAACCGCA----------------------- 378
consensus_9168#2 CAAACACACTCACANAGCTCAACGTTNTAGAAACTCAAAATAGCNAGTCAAAGCAA-AGT 505
consensus_9168#1 GAGATACATGCGAGCGTTTTCTTGTTGGAATGAATGCGAATGGTGATAGAGACCGGGAAA 511
* * *
consensus_9168#0 TGACTTTAGTGCAGCAAAATAGGGGTACAACTAGTTTAATGTCGACCACACGACGACATG 1450
consensus_9168#3 ------------------------------------------------------------
consensus_9168#2 GCACTCTAGGAGAATAGCGATGATGCATGGCTCTGCATGCGTGCGTGCGTGCGTGCGTGC 565
consensus_9168#1 TCGATCGAGGAACATAACAACAAC-CAAAAGGGTATTAGTGTGTGTGTCCCGGTCTTTTC 570
consensus_9168#0 TGGTCGAAATACTGATCGGTGATACAACACGCGTTGAGCAGGAATGTGGTATGAATGGAG 1510
consensus_9168#3 ------------------------------------------------------------
consensus_9168#2 ------------------------------------------------------------
consensus_9168#1 CACTAGCAGCAGTAGTAGTGTCAGCGTCTTATAACAGTGAAACACGACCGAAAGCAACGG 630
consensus_9168#0 CTCCATTGAATTGTTGTTCCTTCAATATTTTCATTCATAGCAAACCCGAAGATCGGTAGC 1570
consensus_9168#3 ------------------------------------------------------------
consensus_9168#2 ------------------------------------------------------------
consensus_9168#1 CATCGCGCTAGTTCTTCTAACAATAATCGTTCGTT------------------------- 665
consensus_9168#0 AATGGTTCGTCCTTTTCTCTGAATGGACACAAAGGGGCAGGGGAAAAATTCAAAATGATT 1630
consensus_9168#3 ------------------------------------------------------------
consensus_9168#2 ------------------------------------------------------------
consensus_9168#1 ------------------------------------------------------------
consensus_9168#0 CAAAGCTTCTCCTCCCACTTCCGCCAACAATCATAAGCTGAGCTGCCGATCACACCAGTA 1690
consensus_9168#3 ------------------------------------------------------------
consensus_9168#2 ------------------------------------------------------------
consensus_9168#1 ------------------------------------------------------------
consensus_9168#0 TAGACTGAAAGGAGGAAGTGTGCGCTTTGCTGTGTTCTCCGGTGTGGTGGAACGTTACGT 1750
consensus_9168#3 ------------------------------------------------------------
consensus_9168#2 ------------------------------------------------------------
consensus_9168#1 ------------------------------------------------------------
consensus_9168#0 TTGCCGTGTACATGTGGAGCTCTTCAACGAATATCTTCCATCTGTTTGCCGTGCGCAATC 1810
consensus_9168#3 ------------------------------------------------------------
consensus_9168#2 ------------------------------------------------------------
consensus_9168#1 ------------------------------------------------------------
consensus_9168#0 TCACGATCGATAAAGCGAGTCAAGAGAAGTCTGTCGGCCGGATCAGACAGACCTAAATGC 1870
consensus_9168#3 ------------------------------------------------------------
consensus_9168#2 ------------------------------------------------------------
consensus_9168#1 ------------------------------------------------------------
consensus_9168#0 AACGAATTATAGTTTGTTTTACCTGCTTTTCATTCTGATTTCTTTCTGTA 1920
consensus_9168#3 --------------------------------------------------
consensus_9168#2 --------------------------------------------------
consensus_9168#1 --------------------------------------------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||